Survival and Life Tables: Nigel Paneth

You might also like

Download as ppt, pdf, or txt
Download as ppt, pdf, or txt
You are on page 1of 33

SURVIVAL AND LIFE

TABLES

Nigel Paneth
THE FIRST FOUR COLUMNS
OF THE LIFE TABLE ARE:
1. AGE (x)

2. AGE-SPECIFIC MORTALITY RATE (qx)

3. NUMBER ALIVE AT BEGINNING OF


YEAR (lx)

4. NUMBER DYING IN THE YEAR (dx)


PROCEDURE:
We use column 2 multiplied by column 3 to
obtain column 4.
Then column 4 is subtracted from column 3 to
obtain the next row’s entry in column 3.
EXAMPLE:
100,000 births ( row 1, column 3) have an infant
mortality rate of 46.99/thousand (row 2, column 2),
so there are 4,699 infant deaths (row 3, column 4).
This leaves 95,301 left (100,000 – 4,699) to begin
the second year of life (row 2 column 3).
If we stopped with the first four columns, we
could still find out the probability of
surviving to any given age.

e.g. in this table, we see that 90.27% of non-


white males survived to age 30.
THE NEXT THREE COLUMNS OF
THE LIFE TABLE ARE:
Column:
5. THE NUMBER OF YEARS LIVED BY THE
POPULATION IN YEAR X (Lx)

6. THE NUMBER OF YEARS LIVED BY THE


POPULATION IN YEAR X AND IN ALL
SUBSEQUENT YEARS (Tx)

7. THE LIFE EXPECTANCY FROM THE


BEGINNING OF YEAR X (ex)
WE CALCULATE COLUMN 5
FROM COLUMNS 3 AND 4 IN THE
FOLLOWING WAY:
The total number of years lived in each year
is listed in column 5, Lx. It is based on two
sources. One source is persons who
survived the year, who are listed in column
3 of the row below. They each contributed
one year. Each person who died during the
year (column 4 of the same row) contributed
a part of year, depending on when they
died. For most purposes, we simply
assume they contributed ½ a year.
The entry for column 5, Lx in this table for age 8-9 is
94,321. Where does this number come from?
1. 94,291 children survived to age 9 (column 3 of
age 9-10), contributing 94,921 years.
2. 60 children died (column 4 of age 8-9) , so
they contributed ½ year each, or 30 years.
3. 94,921 + 30 = 94,321.
EXCEPTION TO THE ½
YEAR ESTIMATION RULE
Because deaths in year 1 are not
evenly distributed during the year
(they are closer to birth), infants
deaths contribute less than ½ a year.

Can you figure out what fraction of a


year are contributed by infant deaths
(0-1) in this table?
1. Lx = 96,254
2. 95,301 contributed one year
3. 96,254 - 95,301 = 953 years, which must come
from infants who died 0-1
4. 4,699 infants died 0-1
5. 953/4,699 = .202 or 1/5 of a year, or about 2.4 months
HOW DO WE GET COLUMN 6, Tx
The top line of Column 6, or Tx=0 , is
obtained by summing up all of the rows in
column 5. It is the total number of years of life
lived by all members of the cohort.
This number is the key calculation in life
expectancy, because, if we divide it by the
number of people in the cohort, we get the
average life expectancy at birth, ex=0, which is
column 7.
COLUMN 7, LIFE
EXPECTANCY, or ex=0
For any year, column 6, Tx, provides the
number of years yet to be lived by the
entire cohort, and column 7, the number
of years lived on average by any
individual in the cohort. (Tx/lx)
Thus column 7 is the final product of the
life table, life expectancy at birth, or life
expectancy at any other specified age.
WHAT IS LIFE
EXPECTANCY?
Life expectancy at birth in the US now
is 77.3 years. This means that a baby
born now will live 77.3 years
if…………..

that baby experiences the same age-


specific mortality rates as are
currently operating in the US.
Life expectancy is a shorthand
way of describing the current
age-specific mortality rates.
SOME OTHER MEASURES OF
SURVIVAL
AND
THE PROBLEM OF CENSORED
DATA
• 5-year survival. Number of people still alive
five years after diagnosis. 
• Median survival. Duration of time until 50% of
the population dies.
• Relative survival. 5-year survival in the group
of interest/5-year survival in all people of the
same age.
• Observed Survival. A life table approach to
dealing with censored data from successive
cohorts of people. Censoring means that
information on some aspect of time or
duration of events of interest is missing.
THREE KINDS OF CENSORING
COMMONLY ENCOUNTERED
• Right censoring
• Left censoring
• Interval censoring

Censoring means that some important


information required to make a
calculation is not available to us. i.e.
censored.
RIGHT CENSORING
Right censoring is the most common
concern. It means that we are not
certain what happened to people after
some point in time. This happens when
some people cannot be followed the
entire time because they died or were
lost to follow-up.
LEFT CENSORING

Left censoring is when we are not


certain what happened to people
before some point in time. Commonest
example is when people already have
the disease of interest when the study
starts.
INTERVAL CENSORING
Interval censoring is when we know that
something happened in an interval (i.e. not
before time x and not after time y), but do
not know exactly when in the interval it
happened. For example, we know that the
patient was well at time x and was
diagnosed with disease at time y, so when
did the disease actually begin? All we
know is the interval.
DEALING WITH RIGHT-
CENSORED DATA

Since right censoring is the


commonest problem, lets try to find out
what 5-year survival is now for people
receiving a certain treatment for a
disease.
OBSERVED SURVIVAL IN
375 TREATED PATIENTS
Number Number alive in
Treated 1999 00 01 02 03
 
1999 84 44 21 13 10 8
2000 62 31 14 10 6
2001 93 50 20 13
2002 60 29 16
2003 76 43
 
Total 375
WHAT IS THE PROBLEM
IN THESE DATA?
We have 5 years of survival data only
from the first cohort, those treated in
1999.

For each successive year, our data is


more right-censored. By 2003, we have
only one year of follow-up available.
What is survival in the first year after treatment?
It is:
(44 + 31 + 50 + 29 + 43 = 197)/375 = 52%

Number Number alive in


Treated 99 00 01 02 03
 
1999 84 44 21 13 10 8
2000 62 31 14 10 6
2001 93 50 20 13
2002 60 29 16
2003 76 43
Total 375
What is survival in year two, if the patient
survived year one?
(21 + 14 + 20 + 16 = 71)/154 = 46%
Note that 154 is also 197 (last slide’s numerator) – 43,
the number for whom we have only one year of data
Number Number alive in
Treated 96 97 98 99 00
 
1995 84 44 21 13 10 8
1996 62 31 14 10 6
1997 93 50 20 13
1998 60 29 16
1999 76 43
Total 375
By the same logic, survival in the third year
(for those who survived two years) is:
(13 + 10 + 13 = 36)/(71 - 16 = 55) = 65%
 Number Number alive in
Treated 99 00 01 02 03
 
1999 84 44 21 13 10 8
2000 62 31 14 10 6
2001 93 50 20 13
2002 60 29 16
2003 76 43
Total 375
In year 4, survival is(10 + 6)/(36-13) = 70%
In year 5, survival is 8/16-6 = 80%

Number Number alive in


Treated 99 00 01 02 03
 
1999 84 44 21 13 10 8
2000 62 31 14 10 6
2001 93 50 20 13
2002 60 29 16
2003 76 43
Total 375
The total OBSERVED SURVIVAL over
the five years of the study is the
product of survival at each year:
 
.54 x .46 x .65 x .70 x .80 = .08 or 8.8%
Subsets of survival can also be
calculated, as for example:
 
2 year survival = .54 x .46
= .239 or 23.9%
Five-year survival is averaged over
the life of the study, and improved
treatment may produce differences in
survival during the life of the project.
The observed survival is an average
over the entire period.
Changes over time can be looked at within
the data. For example, note survival to one
year, by year of enrollment:
 
1999 - 52.3%
2000 - 50.0%
2001 - 53.7%
2002 - 48.3%
2003 - 56.6%
 
Little difference is apparent.
These data also do not include any
losses to follow-up, which would
make our observed survival
estimates less precise. The
calculation is only valid if those
lost to follow-up are similar in
survival rate to those observed.

You might also like