Introduction to

Biogeochemical Cycles Chapter 4 All matter cycles...it is neither created nor destroyed... As the Earth is essentially a closed system with respect to matter, we can say that all matter on Earth cycles . Biogeochemical cycles: the movement (or cycling) of matter through a system

in general... we can subdivide the Earth system into: atmosphere hydrosphere lithosphere biosphere by matter we mean: elements (carbon, nitrogen, oxygen) or molecules (water)

so the movement of matter (for example carbon) between these parts of the system is, practically speaking, a biogeochemical cycle

The Cycling Elements: macronutrients : required in relatively large amounts "big six": carbon hydrogen oxygen nitrogen phosphorous sulfur other macronutrients:

potassium calcium iron magnesium

micronutrients : required in very small amounts, (but still necessary) boron (green plants) copper (some enzymes) molybdenum (nitrogen-fixing bacteria) Generalized Biogeochemical Cycle:

Biogeochemical cycles are part of the larger cycles that describe the functioning of the whole Earth (not just the surface parts)

Geological cycle consists of: tectonic cycle rock cycle hydrologic cycle biogeochemical cycles We will focus on the hydrologic cycle and the biogeochemical cycles. These are the cycles in which humans interact the most.

Hydrologic cycle: introduction (more later with Chapters 19 and 20)

Box model:

Reservoirs, fluxes and residence times Reservoirs: km3 % Atmosphere 12,700 .001 Ocean 1,230,000,000 97.2 Land surface lakes 123,000 .009 rivers and streams 1,200 .0001 Land subsurface (ground water) 4,000,000 .31 Ice (glaciers) 28,600,000 2.15 Fluxes: km 3 /yr P: precipitation total 496,000 land 111,000 ocean 385,000

E: evaporation total 496,000 land 71,000 ocean 425,000 T: transpiration included in evap (plant evaporation) R: surface runoff 26,000 SR: sub surface runoff liquid 12,000 ice 2,000 I: infiltration 14,000 S: springs 2,000 Compare with total human use 3,000

Notes: -- More precipitation falls on the land than evaporates or transpires (40,000 km 3 /yr). -- Excess precipitation leaves as runoff and subsurface runoff -- Less precipitation falls on the ocean than evaporates or transpires (40,000 km 3 /yr). -- Oceans export water to the land by the atmosphere -- humans use 12% of surface runoff

Residence times: atmosphere RT = 12,700 km 3 (relative to sum of in fluxes) 496,000 km 3 /yr = 0.03 yr or 9 days

-- note that since in fluxes equal out fluxes, the RT is the same relative to the sum of the out fluxes -- this is an important RT, as anything that is removed from the atmosphere by rain or snow will also have an RT in the atmosphere nearly equal to this

more residence times: Ocean: RT = 1,230,000,000 km 3 (relative to evap) 425,000 km 3 /yr = 2,900 years this applies to the whole ocean (which can be separated into the surface and deep water) and does not incorporate circulation Streams and rivers: RT = 1,200 km 3 with respect to outflow 26,000 km 3 /yr = .05 yr or 17 days this is the average, but it does give a good idea of the time that water spends in rivers and streams before it flows into the ocean

Ground water: RT = 4,000,000 km 3 with respect to outflow 12,000 km 3 /yr = 330 years once again, this is the average... oldest ground waters can be 10,000 to 40,000 years old... but this average does tell us that: -- ground waters are generally old compared with human lifetimes (we tend to view them as "eternal")

-- ground waters have large sizes and long residence times... hard to pollute, but once polluted, hard to clean up more on water later in Chapters 19 and 20... Introduction to the carbon cycle The carbon cycle is one of the most important to humans because it is important to our existence: -- one of the primary elements forming human tissues -- necessary to plants, the basis of human food and because it is important to the climate system which sets the background for our environment: -- carbon dioxide (CO 2 ) and methane (CH 4 ) are greenhouse gases which help set global temperatures

Basic Carbon cycle:

Box Model:

Reservoirs, Fluxes and Residence Times Fluxes: (in billions of metric tons/year ) Land Plants P: photosynthesis 120 PR: plant respiration 60 SR: soil respiration 60 SF: plants to soils 60 FFF: fossil fuel formation 0.0001 FFB: fossil fuel burning 6 DEF: deforestation 2 Ocean D: dissolving 107 E: exsolving 103 CP: carbonate formation 4 W: weathering 0.6 Volcanoes V: 0.1

Notes on fluxes: -- CO 2 increase in the atmosphere: Flux to the atmosphere: Plant respiration + soil respiration + fossil fuel burning + deforestation + ocean exsolving + weathering... 60+60+6+2+103+0.6 = 231.6 bmt/yr Flux from the atmosphere: Plant photosynthesis + ocean dissolving... 120 + 107 = 227 bmt/yr ...difference is buildup of carbon dioxide in the atmosphere of about 4 bmt/yr (book says 3...) More on fluxes...

-- human caused fluxes are small, but persistent -- largest fluxes are between land plants and atmosphere, and the ocean and the atmosphere -- flux of carbon out of fossil fuels (FFB) is 60,000 times faster than flux into fossil fuels (FFF) -- flux to atmosphere from FFB and DEF (6 + 2 bmt/yr) is greater than accumulation of carbon in the atmosphere (about 4 bmt/yr)... this is becausethe ocean exchange works by diffusion ... Flux by diffusion = k (C air -C ocean ) (C is concentration or amount, k is a constant) if (C air -C ocean ) goes up, flux goes up if (C air -C ocean ) goes down, flux goes down if (C air -C ocean ) reverses, flux reverses even more on fluxes...

-- photosynthesis is the basis of life on Earth... carbon dioxide + water + sunlight _ organic material (sugar) + oxygen -- respiration is the reverse of photosynthesis... organic material + oxygen = carbon dioxide + water + energy animals and plants respire, releasing energy for other activities... decay is also a form of respiration

Reservoirs: billions of metric tons Atmosphere: 720 Ocean: 39,000 Carbonates: 100,000,000 Fossil fuels: 4,000 Land plants: 560 Soils: 1500

Notes on reservoirs: -- most carbon is in rocks (carbonates and other sediments) -- most carbon not in rocks is in the ocean -- about 3 times more carbon in soils than in land plants

Residence times: (years) (all relative to sum of out fluxes) Land plants ~ 5

atmosphere ~ 3 soils ~ 25 Fossil fuels ~ 650 oceans ~ 350 carbonates ~ 150 million

Notes on residence times: -- some in fluxes are not balanced by out fluxes ...the atmosphere and fossil fuels, for example... so RT's are slightly different (and reservoirs are growing... or shrinking) -- the RT of carbon in the air (mostly carbon dioxide , but some methane ) is long enough that the air is well mixed (atmosphere mixes in about 1 year) -- the RT of soils is the average RT... some parts cycle very slowly (1,000's of years), some parts very rapidly (a few weeks to months... leaves, for example) -- the RT of fossil fuels reflects all FF's suspected to exist... this is a combination of: ... recoverable ... unrecoverable (both physically and economically) RT's of recoverable FF's: coal: ~ 350 years oil: ~ 40 years natural gas: ~ 60 years More notes on residence times: -- ocean RT also reflects the average, which combines the surface water (short RT, few months to years) and deep water (long RT, 200 to 400 years)... average is weighted towards deep water, as this is most of the water -- ocean RT reflects the circulation of the ocean ( deep water formation ) Still more on fluxes/residence times:

-- Anthropogenic flux (FFB and DEF) to atmosphere ~ 8 bmt/yr , but atmospheric increase is only ~ 4 bmt/yr Question: Where does the missing 4 bmt/yr go? Two possibilities: Photosynthesis vs. Ocean uptake - -Important to know this because the residence times are so different Carbon => plants recycles quickly ( <70 yr ) to atmosphere Carbon => ocean recycles slowly ( >300 yr ) to atmosphere

Carbonate - Silicate Cycle Long term cycle of the carbon cycle, tied with the rock (silicate) cycle Time scale for this cycle is millions to hundreds of millions of years, so not a major concern of humans... On this time scale, carbon cycling by plants, oceans and the atmosphere is thought to be in balance (steady state or equilibrium )... so carbon dioxide levels in the atmosphere are thought to be controlled by weathering rates and rates of volcanic eruptions Weathering rates are thought to be controlled by rate of tectonic uplift... --more uplift, more weathering, less atmospheric carbon dioxide

May explain the slow decline in atmospheric carbon dioxide from levels of several thousand parts per million (ppm) about 100 million years ago, to 280 ppm in the pre-industrial time. During this time, the Tibetan Plateau and Rocky Mountain Plateau were raised by tectonic activity...

Also may provide long term negative feedback to keep carbon dioxide levels from getting too high...

warming _ more evaporation _ rain _ weathering _ carbonate _ removes carbon dioxide from atmosphere _ cooling

Introduction to the Nitrogen Cycle Important cycle because: -- nitrogen is a necessary nutrient -- nitrogen is part of acid rain The Cycle:

Some terminology:

Limiting Nutrient - Amount of an element necessary for plant life is in short supply

Nitrogen Fixation - Chemical conversion of N 2 to more reactive forms, e.g. NH 3 (ammonia) or NO 3 - (nitrate)

Denitrification - Chemical conversion from nitrate (NO 3 -) back to N 2

Box Model

Reservoirs: (in millions of metric tons )

Atmosphere: 4,000,000,000 Land Plants: 3500

Soils: 9500 Oceans: 23,000,000 Sediments and Rocks: 200,000,000,000

Notes on Reservoirs:

- Buried sediments and rocks are the largest pool of nitrogen, but this reservoir is a minor part of the cycle.

- Lots of nitrogen in the atmosphere (N 2 = 80%), but this form can't be used by plants. So nitrogen still a limiting nutrient ; need nitrogen fixation to make it usable to plants.

Fluxes: (in millions of metric tons/year ) Atmospheric LF: Land Fixation 140 LD: Land Denitrification 130 OF: Oceanic Fixation 50 OD: Oceanic Denitrification 110 I: Industrial Fixation 100 FFB: Fossil Fuel Burning 20 BB: Biomass Burning 10 L: Lightning 20 Other D: Decay 1200 G: Growth 1200

L-O: Land-to-Ocean 48 (Rivers 36) (Dust 6) (NOx 6) O-L: Ocean-to-Land 15 (Sea Spray) Burial: 10 Notes on Fluxes:

- Industrial fixation is used to make fertilizers to provide usable nitrogen for crops. This flux is comparable to natural fixation.

- Most flux is in land plants to/from soils; plants recycle nitrogen since it's a limiting nutrient.

- Specialized bacteria and lightning are the only natural ways that nitrogen is fixed. Lightning may have been necessary for life to begin: no life => no bacteria => no bacterial fixation => no usable nitrogen => no life... More on fluxes:

How did agriculture survive before fertilizers?

- Early civilizations had to rely on natural regeneration of fixed nitrogen: Annual floods bring fresh sediments (e.g., Nile Valley) Slash/burn agriculture: once the soil nutrients are depleted, move on to a new place Crop rotation : certain crops (e.g. soybeans) are good at fixing nitrogen, others (e.g. corn) use it up; plant on alternate years

Nitrogen chemical cycle

Terminology: F = fixation , D = denitrification , O = oxidation

Residence Times

Major Reservoirs: Atmosphere : 14 million yrs. Land plants : ~ 3 yrs. Oceans : ~ 20,000 yrs. Soils: ~ 9 yrs.

Atmospheric pollutants:

NO x ~ 4 days N 2 O 120 yrs. Notes on residence times:

-- Reservoirs where N 2 is the dominant form of nitrogen ( atmosphere, ocean ) have long residence times.

-- Reservoirs where fixed nitrogen is dominant ( soils, plants ) have short residence times.

=> N 2 is very stable, but fixed nitrogen compounds are very reactive (that's why plants can utilize them) e.g. a common fertilizer is ammonium nitrate , which is also an explosive!

-- N 2 O , a strong greenhouse gas, doesn't go away quickly! Sources of Nitrogen Pollution:

-- SMOG --

NO x is a product of automobile exhaust and other combustion sources => NO 2 is the chemical that gives smog it's characteristic brown color

NO 2 also leads to ozone production in the troposphere ... ...ozone is needed in the stratosphere to protect the surface of the earth from UV radiation, but in thetroposphere it's a pollutant. More on Nitrogen Pollution:

-- Acid Rain --

NO 2 in the atmosphere can react to give nitric acid : NO 2 + OH ---> HNO 3 SO 2 (sulfur dioxide) also reacts to produce acids. SO 2 is often a product from the burning of coal.

These acids are soluble in water: => acid rain -- Acid rain is a problem downwind of major industrial emissions coal power-plants in midwest => acid rain in the eastern US Still more on Nitrogen Pollution:

-- Eutrophication => increasing the nutrients in a body of water

Most rivers and estuaries are nutrient limited (either N or P ). Runoff carrying excess nitrate fertilizers enriches these bodies of water. However: Algae respond to this first! Excess algae => deplete all O 2 in the water => other species die

So : fertilizer runoff damages ecosystems. Untreated sewage also causes this problem. The Phosphorus Cycle Important because: -- Phosphorus is a necessary, limiting nutrient

-- Phosphate runoff causes eutrophication

Box Model:

Reservoirs: (in millions of metric tons )

Earth's Crust: 20,000,000,000 ( recoverable : ~20,000) Ocean: 100,000 Freshwater: ~100 Land Plants: ~3000 Soils: ~100,000

-- Note that most of the phosphorus is in rocks that are unrecoverable. Fluxes: (in millions of metric tons/yr )

M: Mining 50 (humans) F: Fertilization 50 (humans)

W: Weathering 10 R: Runoff 20 B: Burial 13 D: Decay 200 G: Growth 200 Other fluxes: Ocean to land by sea spray 0.03 Ocean to land by guano 0.01 Industrial wastes 2 Notes on Fluxes: -- Phosphorous has no stable gas phase, so addition of P to land is slow (low rain P). -- Most P in plants cycles between living and dead plants... addition by weathering is small compared to cycling within plants. -- Humans have greatly accelerated P transfer from rocks to plants and soils (about 5x faster than weathering). -- Natural transfer of P from ocean to land is very small... less than 0.03 mmt/yr for sea spray and 0.01 mmt/yr for guano. -- Sources for human mining are guano and very old (10 to 15 million years ago) rocks formed in shallow seas which dried up (Florida's Bone Valley). Such rocks are not forming today as rapidly.... -- Phosphorous is a strongly limiting nutrient because it cannot be transferred from the ocean to plants very effectively.

Residence Times: -- Ocean: 100,000 mmt / 20 mmt/yr = 5,000 years (with respect to input). Availability to marine organisms is limited by the fact that most P is in the deep ocean. Main productivity areas are near upwelling zones where deep water comes to the surface. -- Land deposits:

For phosphate rocks in the U.S.: 2,200 mmt / 50 mmt/yr = 44 years Longer if less concentrated deposits are mined (8,800 mmt / 50 mmt/yr = 175 years)... major issue is mining techniques (strip mining used) with visual impacts and water pollution. Review of Basic Concepts in Nutrient Cycling

Notes: -- Movement through the atmosphere is generally rapid -- Movement through the soils is generally slow

-- Movement from terrestrial biosphere to the ocean (via stream flow, usually) must be replaced by movement either through the atmosphere (such as with nitrogen and carbon) or by weathering (such as with phosphorous or calcium). The atmospheric route is much faster! Increased transport by stream flow severely disrupts the cycles of elements without a gaseous phase.

Thought for the Day: Humans clearly disrupt many, if not all biogeochemical cycles...and in the process threaten many ecosystems. In the absence of humans, are the biogeochemical cycles stable? Probably not... Life has existed for about 3.5 billion years, and a complete breakdown has not occurred since oxygen became available about 1.5 billion years ago. Change is a part of natural biogeochemical cycles resulting in periods of abundant biota and periods of scarce biota (both ocean and land).

Biogeochemical cycle From Wikipedia, the free encyclopedia

A commonly cited example is the water cycle. In geography and Earth science, a biogeochemical cycle or substance turnover or cycling of substances is a pathway by which achemical element or molecule moves through both biotic (biosphere) and abiotic (lithosphere, atmosphere, and hydrosphere) compartments of Earth. A cycle is a series of change which comes back to the starting point and which can be repeated.[1][2] The term biogeochemical tells us that biological, geological and chemical factors are all involved. The circulation of chemical nutrients like carbon, oxygen, nitrogen, phosphorus, calcium, and water etc. through the biological and physical world are known as biogeochemical cycles. In effect, the element is recycled, although in some cycles there may be places (called reservoirs)

where the element is accumulated or held for a long period of time (such as an ocean or lake for water).[1][2] Water, for example, is always recycled through the water cycle, as shown in the diagram. The water undergoes evaporation,condensation, and precipitation, falling back to Earth clean and fresh. Elements, chemical compounds, and other forms of matter are passed from one organism to another and from one part of the biosphere to another through the biogeochemical cycles.[1][2] Contents [hide]

1 Systems 2 Reservoirs 3 Important cycles 4 See also 5 References [edit]Systems

Chloroplasts conduct photosynthesis and are found in plant cells and other eukaryoticorganisms. These are Chloroplasts visible in the cells of Plagiomnium affine Many-fruited Thyme-moss. Ecological systems (ecosystems) have many biogeochemical cycles operating as a part of the system, for example the water cycle, the carbon cycle, the nitrogen cycle, etc. All chemical elements occurring in organisms are part of biogeochemical cycles. In addition to being a part of living organisms, these chemical elements also cycle through abiotic factors of ecosystems such as water (hydrosphere), land (lithosphere), and/or the air (atmosphere).[3] The living factors of the planet can be referred to collectively as the biosphere. All the nutrientssuch as carbon, nitrogen, oxygen, phosphorus, and sulfur

used in ecosystems by living organisms are a part of a closed system; therefore, these chemicals are recycled instead of being lost and replenished constantly such as in an open system.[3] The flow of energy in an ecosystem is an open system; the sun constantly gives the planet energy in the form of light while it is eventually used and lost in the form of heat throughout the trophic levels of a food web. Carbon is used to make carbohydrates, fats, and proteins, the major sources of food energy. These compounds are oxidized to release carbon dioxide, which can be captured by plants to make organic compounds. The chemical reaction is powered by the light energy of the sun. It is possible for an ecosystem to obtain energy without sunlight. Carbon must be combined with hydrogen and oxygen in order to be utilized as an energy source, and this process depends on sunlight. Ecosystems in the deep sea, where no sunlight can penetrate, use sulfur. Hydrogen sulfidenear hydrothermal vents can be utilized by organisms such as the giant tube worm. In the sulfur cycle, sulfur can be forever recycled as a source of energy. Energy can be released through the oxidation and reduction of sulfur compounds (e.g., oxidizing elemental sulfur to sulfite and then tosulfate). Although the Earth constantly receives energy from the sun, its chemical composition is essentially fixed, as additional matter is only occasionally added by meteorites. Because this chemical composition is not replenished like energy, all processes that depend on these chemicals must be recycled. These cycles include both the living biosphere and the nonliving lithosphere, atmosphere, and hydrosphere. [edit]Reservoirs

Coal is a reservoir of carbon

The chemicals are sometimes held for long periods of time in one place. This place is called a reservoir, which, for example, includes such things ascoal deposits that are storing carbon for a long period of time.[4] When chemicals are held for only short periods of time, they are being held in exchange pools. Examples of exchange pools include plants and animals.[4] Plants and animals utilize carbon to produce carbohydrates, fats, and proteins, which can then be used to build their internal structures or to obtain energy. Plants and animals temporarily use carbon in their systems and then release it back into the air or surrounding medium. Generally, reservoirs are abiotic factors whereas exchange pools are biotic factors.[5] Carbon is held for a relatively short time in plants and animals in comparison to coal deposits. The amount of time that a chemical is held in one place is called its residence.[4] [edit]Important cycles The most well-known and important biogeochemical cycles, for example, include

the carbon cycle, the nitrogen cycle, the oxygen cycle, the phosphorus cycle, the sulfur cycle, the water cycle, and the rock cycle.

There are many biogeochemical cycles that are currently being studied for the first time as climate change and human impacts are drastically changing the speed, intensity, and balance of these relatively unknown cycles. These newly studied biogeochemical cycles include

the mercury cycle,[6] and the human-caused cycle of atrazine, which may affect certain species.

Biogeochemical cycles always involve hot equilibrium states: a balance in the cycling of the element between compartments. However, overall balance may involve compartments distributed on a global scale. As biogeochemical cycles describe the movements of substances on the entire globe, the study of these is inherently multidiciplinary. The carbon cycle may be

related to research in ecology andatmospheric sciences.[7] Biochemical dynamics would also be related to the fields of geology and pedology (soil study).[8] Global biogeochemical cycles critical for life

Nitrogen cycle

Water cycle

Carbon cycle

Oxygen cycle

Phosphorus cycle [edit]See also Environment portal Ecology portal Earth sciences portal Sustainable development portal

Biodiversity Bioregion Earth Science Ecology Ecosystem Soil zoology GEOTRACES Natural environment Nature Recycling (ecological) Sulfur Cycle

[edit]References 1. ^ a b c Prentice Hall Biology. 2. ^ a b c Matter cycles at Lenntech. 3. ^ a b The Environmental Literacy Council Biogeochemical Cycles 4. ^ a b c Biogeochemical Cycles: Carbon Cycle. 5. ^ Reservoir Pool. Encyclopdia Britannica Online. 2009. 6. ^ Mercury Cycling in the Environment. USGS. October 17, 2008. 7. ^ A. G. Georgiadi, et al. 3.2. Biogeochemical Cycles. 8. ^ Distributed Active Archive Center for Biogeochemical Data. [hide]

V T E

Biogeochemical cycles

Carbon cycle Hydrogen cycle Nitrogen cycle Oxygen cycle Phosphorus cycle Sulfur cycle Water cycle Mercury cycle

[hide]

V T E

Modelling ecosystems trophic components

Abiotic component Abiotic stress Behaviour Biogeochemical cycle Biomass Biotic component Biotic stress Carrying capacity Competition Ecosystem Ecosystem ecology Ecosystem model Keystone species List of feeding behaviours Metabolic theory of ecology Productivity

General

Autotrophs Chemosynthesis Chemotrophs Foundation species Mixotrophs Myco-heterotrophy Mycotroph Organotrophs Photoheterotrophs Photosynthesis Photosynthetic efficiency Phototrophs Primary nutritional groups Primary production Apex predator Bacterivore Carnivores Chemoorganotroph Foraging Generalist and specialist species

Producers

Consumers

Intraguild predation Herbivores Heterotroph Heterotrophic nutrition Insectivore Mesopredator release hypothesis Omnivores Optimal foraging theory Predation Prey switching Chemoorganoheterotrophy Decomposition Detritivores Detritus Archaea Bacteriophage Environmental microbiology Lithoautotroph Lithotrophy Microbial cooperation

Decomposers

Microorganisms

Microbial ecology Microbial food web Microbial intelligence Microbial loop Microbial mat Microbial metabolism Phage ecology Biomagnification Ecological efficiency Ecological pyramid Energy flow Food chain Trophic level Cold seeps Hydrothermal vents Intertidal

Food webs

Example webs Kelp forests

Lakes North Pacific Subtropical Gyre Rivers

San Francisco Estuary Soil Tide pool Ascendency Bioaccumulation Cascade effect Climax community Competitive exclusion principle Consumer-resource systems Copiotrophs

Dominance Processes Ecological network

Ecological succession Energy quality Energy Systems Language f-ratio Feed conversion ratio Feeding frenzy Mesotrophic soil

Nutrient cycle Oligotroph Paradox of the plankton Trophic cascade Trophic mutualism Trophic state index Animal coloration Antipredator adaptations Camouflage Deimatic behaviour Herbivore adaptations to plant defense Mimicry Plant defense against herbivory Predator avoidance in schooling fish [show]

Defense/counter

V T E

Modelling ecosystems other compone Categories:

Biogeochemical cycle Geochemistry Biogeography

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