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HlyB Saccharomyces Cerevisiae
HlyB Saccharomyces Cerevisiae
HlyB Saccharomyces Cerevisiae
The hemolysin B (HlyB) protein of Escherichia cnli, a member of the ABC-transporter family, was
expressed in Succharomyces cerevisiue and tested for its ability to complement a defect in the a-factor
transporter Ste6. We found that HlyB was not able to restore mating ability to a STEh deletion strain. The
HlyB protein did not co-fractionate with Ste6 on sucrose gradients, indicating that improper localization of
the HlyB protein could contribute to the lack of complementation. Immunofluorescence experiments
suggest that HlyB is localized to structures derived from the endoplasmic reticulum (ER). The HlyBexpressing cells revealed a perinuclear staining typical of ER-localized proteins and intensely staining
ring-like structures (HlyB-bodies). Double-label immunofluorescence experiments show that the HlyB
structures also contain the ER binding protein (BiP), the product of the kAR2 gene. The HlyB protein,
however, did not co-fractionate with another ER marker protein, the NADPH cytochroine c reductase.
The HIyB bodies could be derivatives of a novel compartment of the early secretory pathway which
contains BiP but not other resident ER proteins. In this case, HlyB could serve as a tool for the biochemical characterization of this compartment.
The hemolysin B (HIyB) protein of Escherichiu coli is required in conjunction with hemolysin D (HlyD) and TolC [l]
for the secretion of the 107-kDa hemolysin A protein. HlyB is
a member of the ABC-transporter superfamily. ABC-transporters are characterized by a motif consisting of six putative transmembrane segments and a domain with an ATP-binding site,
hence the name ATP binding cassette transporter [2].HlyB and
other toxin-secreting bacterial transporters are unique among the
ABC-transporters in that they are able to transport large polypeptides across membranes [3]. The HlyB protein has striking
similarity to the mammalian Mdr proteins. By cluster analysis,
it has been shown that HlyB is more closely related to the human
P-glycoprotein (Mdrl) than to other E. coli ABC-transporters,
for instance to HisP or MalK [4]. Based on codon usage, it has
been suggested that E. coli has only recently acquired the hlyB
gene from a distantly related organism [ 5 ] . Considering these
findings, it appears possible that at least part of the hlyB gene is
of mammalian origin.
We were interested to determine whether the E. coli HlyB
protein could substitute for the yeast a-factor transporter Ste6
[6, 71. Ste6 is also closely related to the mammalian multi-drugresistance (Mdr) proteins. To some extent, the proteins are even
Correspondence to R. Kolling, Institut fur Mikrobiologie, Geb.
26.1 2.01, Heinrich-Heine-Universitat Dusseldorf, Universitatsstrasse 1
~
357
the cells were first incubated with a mixture of mouse anti-hemagglutin antibodies (1 :200) and rabbit anti-Kar2 antibodies
(1 :500). then with a mixture of anti-mouse IgG fluoresceinisothi0c:yanate-conjugated antibodies (1 : 300) and anti-rabbit
IgG rhcldamine-conjugated antibodies (1 : 300). The anti-Kar2
sera were a gift from Mark Rose (Princeton University,
Princeton, USA). Between the different steps, the cells were
washed extensively with NaCIP, using an aspirator. The cells
were mounted with mounting medium (1 mg/ml p-phenylendiamine, O.lXNaCl/P,, 90% glycerol, pH 9). The cells were examined with a Zeiss standard microscope equipped for epifluorescence and photographed with Kodak TMAX 400 black and
white film.
Fractionation experiments. Exponentially growing cells
(A,,,,, = 0.5-1.0, 3-6X107/ml) from a 100-ml culture were harvested, washed once in cold 10 mM NaN, and once in STEDIO
(lo%, by mass, sucrose, 10 mM Tris/CI, pH 7.6, 10 mM EDTA,
1 mM clithiothreitol). After resuspending the cells i n 0.5 ml
STED10 (+protease inhibitors; 0.5 pg/ml each of aprotinin,
antipain. chymostatin, leupeptin, pepstatin A and 1.6 pg/ml
benzamidine, 1 pg/ml phenanthroline and 170 pg/ml phenylmethylsiilfonylfluoride), glass beads were added up to the top of
the liquid and the suspension was vortexed for 2 min. After the
addition of another 1 ml STEDIO, the extract was transferred to
a fresh tube and spun at 500 g for 5 min to remove cell debris.
About 1 ml cleared cell extract was loaded onto a sucrose gradient prep,xed the following way. In a SW40 centrifuge tube, 4 ml
STEDSO (53% sucrose), STED35 (35% sucrose) and STED20
(20% sucrose) were layered on top of each other (STED =
sucrose, 10 mM Tris/Cl, pH 7.6, 1 mM EDTA, 1 mM dithiothreitol). The centrifuge tubes were slowly turned to a horizontal
position. After 3 -5 h of horizontal diffusion, the gradients were
again turned into an upright position, loaded with extract and
spun for 13-17 h at 30000 rpm in a SW40 rotor at 4C. 700p1 fractions were collected from the top of the gradient.
Enzyme assays. NADPH cytochrome c reductase. The redox-change in the absorbance spectrum of cytochrome c upon
reduction by the enzyme was measured. The reaction mixture
consisted of 100 mM KP,, pH 7.0, 1 mM KCN, NADPH
(100 pM) and cytochrome c (25 pM) in its oxidized form. 2050 p1 gradient fractions are added and the initial rate of increase
in absorlxnce at 550 nm was registered in a spectrophotometer.
a-Mannosiduse. The assay measures the generation of the
yellow p-nitrophenol from the non-coloured glycoside. To
2.50 pl of the reaction mixture (SO mM KP,, 0.04% Triton X100, 1 nnM f7-nitrophenyl-a-mannoside), 50 p1 of the gradient
fractions were added. After incubating the samples at 30C for
2 h, 600 pl 2% Na,CO, was added to stop the reaction. Then,
the absorbance at 400 nm was determined.
Mating assay. Equal numbers of exponentially growing
MATa arid MATa cells (1 X 107)were mixed. The cells were pelleted, overlayed with 5 ml YPD medium and incubated for 4 h
at 30C. Aliquots of serial dilutions were plated on rich medium
to deterrnine the total cell number and on selective plates allowing only for growth of the zygotes. The fraction of cells which
were able to grow on the selective plates was determined. The
frequency of zygote formation for a wild-type MATa mating
partner was usually about 0.12. For a Aste6 MATa strain no zygotes were detected among 5 X 10, cells (frequency < 2X 1O-7).
RESULTS
Expression of hemolysin B in yeast. The hemolysin B gene of
E. coli was cloned behind the PDCl promoter on a multi-copy
plasmid (pRK168). The upstream ATGs 5 of the start codon
358
was transformed with the plasmids indicated. Cell extracts were prepared
and analyzed by Western blotting (A) with anti-hemolysin B serum or
(B) with anti-hemagglutinin tag serum.
were removed by exonuclease Ba131 digestion to prevent improper tranvlation initation. To demonstrate HlyB expression in
yeast, antibodies were raised against a TrpE-HlyB fusion protein. The antibodies were affinity purified against fusion protein
bound to a column. With these antibodies, a specific HlyB signal
could be detected on Western blots with whole cell extracts
(Fig. 2A, lane 1). The signal, however, was only weak. To improve the detection of the hemolysin B protein, we constructed
an epitope-tagged variant of hemolysin B by inserting the hemagglutinin-tag at the C-teiminus of HlyB (pRK166). The HlyBhemagglutinin protein could be detected in whole cell extracts
by Western blotting with anti-(hemolysin B) (Fig. 2A, lane 2)
and with anti-hemagglutinin-tag antibodies (Fig. 2 B, lane 6).
The addition of the hemagglutinin-tag seems to somehow stabilize the protein, since we observed a higher protein level for the
HlyB-hemagglutinin variant compared to normal HlyB protein
(Fig. 2A, lanes 1 and 2). The hemagglutinin-tagged variant
shows a slightly slower mobility on SDS/polyacrylamide gels,
due to the presence of 14 additional hemagglutinin-tag amino
acids.
HlyB expression does not promote mating. Sequence comparisons suggested a close relationship between hemolysin B and
Ste6 [17]. Hydropathy profiles of Ste6 and HlyB are almost superimposible, indicating that the structures of the proteins are
very similar. Quantitative mating experiments with HlyB
(JPY201 dste6/pRK168) or HlyB-HA (JPY201 dste6/166) expressing strains, however, demonstrated that HlyB is not able to
replace the Ste6 protein in a-factor secretion. The same result
was obtained with a chimeric protein (pRK87, Figs 1 and 2A,
lane 4) where the 150-amino-acid N-terminal extension of HlyB
had been replaced by the corresponding 100-amino-acid segment of Ste6 connecting the two ABC-transporter repeats.
One possible reason for the lack of mating activity could be
that the HlyB protein is mislocalized to a cellular compartment
incompatible with a-factor secretion. In an earlier report, it was
shown that a functional transporter can be reconstituted by expressing the two halves of Ste6 separately on two different polypeptides [IS]. Both halves are, however, required for
a-factor secretion. Obviously, both halves of Ste6 carry the
targeting information for their correct cellular localization,
otherwise independent expression of the two half-molecules
would not have led to the reconstitution of a functional transporter. To make use of the targeting information contained in the
Ste6 repeats, a chimeric protein was constructed where the Cterminal Ste6 repeat was replaced by the corresponding HlyB
sequences (Fig. 1). As the other constructs, this chimeric protein
(pRK102) was expressed (Fig. 2A, lane 3) but was non-functional.
6 0 ~
*.----30
20
10
10
12
14
16
18
Fractions
Fig. 3. Fractionation of membranes on a sucrose gradient. A whole
cell extract of strain DBY2063, transformed with the plasmid pRK166,
was fractionated on a sucrose gradient. The gradient fractions were analyzed by Western blotting with antibodies against (A) the hemagglutinin
tag, (B) the p-subunit of F1 ATPase (Atp2), (C) the Ste6 protein, (D)
dipeptidyl aininopeptidase A (DPAP A) and (E) plasma membrane
Intracellular localization of HIyB. The intracellular distribution of the HlyB protein was examined by cell fractionation experiments. Whole cell extracts were fractionated on sucrose gradients. The gradient fractions were analyzed for the presence of
different marker proteins by Western blotting (Fig. 3, A-E) or
by enzyme assay (Fig. 3 F). The peak of the HlyB-hemagglutinin
distribution was found in fractions 9 and 10 (31-33% sucrose).
HlyB, therefore, does not co-localize with the endogenous ABCtransporter Ste6 which has a distribution with the main peak in
fractions 7 and 8 (27-29% sucrose). As demonstrated previously 1191, the Ste6 protein co-fractionates with the Golgi
marker protein dipeptidyl aminopeptidase A (DPAP A) [20].
Also, the distribution of HlyB-hemagglutinin on the gradient is
clearly different from the distribution of the ER marker NADPH
cytochrome c reductase [21] (peak in fractions 3 and 4, 2022 % sucrose), the plasma membrane marker plasma membrane
ATPase (Pmal) 1221 (peak in fractions 15-18, 45-51%
sucrose) or the vacuolar marker protein a-mannosidase (Ams 1 )
HlyB-HA
DAPl
359
DISCW3SION
Fig. 4. Irnrnunofluorescence staining of HlyB-HA. Cells of strain
DBY2063 transformed with the plasmid pRK166 were stained with antihemagglutinin tag primary antibodies and fluorescein-isothiocyanateconjugated anti-rnouse secondary antibodies. No staining was observed
with ?train DBY2063 expressing the pRK168 hemolysin B variant without hemagglutinin tag (not shown). The nuclear DNA was stained with
DAPI.
HlyB-HA
KarP
DAPI
360
6. Kuchler, K., Sterne, R. E. & Thorner, J. (1989) Saccharomyes cereresides in such a compartment, it could be used as a marker for
visiae STE6 gene product: a novel pathway for protein export in
its biochemical characterization.
eukaryotic cells, EMBO J. 8, 3973-3984.
The brightly staining HlyB containing structures are reminis7. McGrath, J. P. & Varshavsky, A. (1989) The yeast STE6 gene encent of the recently described BiP bodies [9]. These structures,
codes a homologue of the mammalian multidrug resistance Pstained by anti-BiP (Kar2). were observed on two occasions,
glycoprotein, Nature 340, 400-404.
upon overproduction of the Secl2 protein and upon imposition
8 . Raymond, M., Gros, P., Whiteway, M. & Thomas, D. Y. (1992)
of a secretory block between the ER and Golgi in sec mutants.
Functional complementation of yeast ste6 by a mammalian multidrug resistance mdr gene, Science 256,232-233.
Usually, a relatively large number of small dots were observed.
9. Nishikawa. S., Hirata, A. & Nakano, A. (1994) Inhibition of endoHowever, there was one sec mutant (sec20) which had a pattern
plasmic reticulum (ER)-to-Golgi transport induces relocalization
that closely resembled our HlyB staining pattern. So, there is
of binding protein (BiP) within the ER to form the BiP bodies,
some justification for the view that HlyB bodies and BiP bodies
Molec. Biol. Cell 5, 1129-1143.
are analogous structures. Since BiP bodies are formed when
10. Rose, M. D., Misra, L. M. & Vogel, J. P. (1989) KAR2, a karyogamy
secretion between ER and Golgi is blocked, overproduction of
gene, is the yeast homolog of the mammalian BiPlGRP78 gene,
HlyB may similarly lead to a block early in the secretory pathCell 57, 1212-1221.
way. Since only few cells in the cell population exhibit HlyB 11. Preuss, D., Mulholland, J., Kaiser, C. A., Orlean, P., Albright, C.,
bodies, which presumably are the result of extreme HlyB overRose, M. D., Robbins, P. & Botstein, D. (1991 j Structure of the
yeast endoplasmic reticulum: localization of ER proteins using
production, it is, however, difficult to prove this assumption.
immunofluorescence and immunoelectron microscopy, Yeast 7,
Why is the HlyB protein retained early in the secretory path891 -91 1.
way ? According to the bulk-flow hypothesis, one would assume
12.
Kiilling,
R., Nguyen, T., Chen, E. Y. & Botstein, D. (1993) A new
that HlyB is transported to the default compartment, unless it
yeast gene with a myosin-like heptad repeat structure, Mol. Gen.
carries specific localization signals. For membrane proteins in
Genet. 237, 359-369.
yeast, the default compartment seems to be the vacuole [20]. 13. Hess, J., Wels, W., Vogel, M. & Goebel. W. (1986) Nucleotide seSince HlyB does not co-fractionate with the vacuolar marker uquence of a plasmid-encoded hemolysin determinant and its commannosidase, there is no indication for a vacuolar localization
parison with a corresponding chromosomal hemlysin sequence,
of HlyB. HlyB could be retained early in the secretory pathway,
FEMS Microbid. Lett. 34, 1 - 11.
due to the presence of an ER retention signal [27, 281. However, 14. Ma, H., Kunes, S., Schatz, P. J. & Botstein, D. (1987) Plasinid construction by homologous recombination in yeast, Gene (Amst.)
HlyB neither contains a C-terminal HDEL sequence nor a dily58, 201 -216.
sine motif. However, we cannot rule out the possibility that unknown retention signals exist in the HlyB protein. There are 15. Dieckmann, C. L. & Tzagoloff, A. (1985) Assembly of the mitochondrial membrane system. CBP6, a yeast nuclear gene necesindications that other ER retention signals exist in addition to
sary for the synthesis of cytochrome b, J . Biol. Chem. 260, 1513the known signals [29]. Retention of HlyB could also occur by
1520.
formation of oligomers. This retention mechanism has been pro- 16. Pringle, J. R., Preston, R. A., Adams, A. E. M., Stearns, T., Drubin,
posed for p63, a protein of the intermediate compartment [30]
D. G., Haarer, B. K. & Jones, E. W. (1989) Fluorescence microand for Golgi proteins [30, 311. Another possibility is that the
scopy methods for yeast, Methods Cell Biol. 31, 357-434.
HlyB protein is retained in the ER by components of the ER 17. Kuchler, K. & Thomer, J. (1992) Secretion of peptides and proteins
lacking hydrophobic signal sequences: the role of adenosine
quality control system, such as BiP or calnexin [32], because
tripliosphate-driven membrane translocators, Endocrine Rev. 13,
of incomplete folding or rnisfolding.
499 - 5 14.
In summary, we have shown that HlyB accumulates in a
novel structure of the early secretory pathway which could be 18. Berkower, C. & Michaelis, S. (1991) Mutational analysis of the
yeast a-factor transporter STE6, a member of the ATP binding
part of the ER or which could correspond to an ER-Golgi intercassette (ABC) protein family, EMBO J. 10, 3777-3785.
mediate compartment. HlyB could serve as a tool for the bio19. Kiilling, R. & Hollenberg, C. P. (1994) The ABC-transporter Ste6
chemical characterization of this compartment.
accumulates in the plasma membrane in a ubiquitinated form in
We thank Kevin Baker for the Atp2 antibodies, Trinad Chakraborty
for the hemolysin plasmids, Mark Rose for the Kar2 antibodies, Ramon
Serrano for the Pmal antibodies and for communicating his cell fractionation protocol and Tom Stevens for the DPAP A antibodies. This work
was supported in part by the BMBF project Stoffurnwandlungen mit Bioktrtalyscitoren and by Deutsche For.s-sc.hunRsRemeinschuft grant KO 9631
2-1 to R. K.
REFERENCES
1 . Wandersman, C. & Delepelaire, P. (1990) TolC, an Escherichia coli
outer membrane protein required for hemolysin secretion, Proc.
Natl Acad. Sci. USA 87, 4776-4780.
2. Higgins. C. F. (1992) ABC transporters: from microorganisms to
man. Annu. Rev. Cell Biol. 8, 67- 113.
3. Blight, M. A. & Holland, I. B. (1990) Structure and function of
haemolysin B, P-plycoprotein and other members of a novel family of membrane ~ranalocators,Mol. Microhiol. 4, 873 -880.
4. Gerlach. J . H., Endicott. J. A,. Juranka, P. F., Henderson, G., Sarangi, F., Deuchars. K. L. & Ling, V. (1986) Homology between
P-glycoprotein and a bacterial hnemolysin transport protein SUEgests a model for multidrug resistance, Nature 324, 485 -489.
5 . Felmlee, T., Pellett, S. & Welch, R. A . (1985) Nucleotide Sequence
of an Esc,herichia coli chromosomal hemolysin, .I. Bucteriol. 163,
94- 105.
361
30. Schweizer, A,, Rohrer, J., Hauri, H.-P. & Kornfeld, S. (1994) Retention of p63 in an ER-Golgi intermediate compartment depends on
the presence of all three of its domains and on its ability to form
oligomers, J. Cell Biol. 126, 25-39.
31. Weisz, 0. W., Swift, A. M. & Machamer, C. E. (1993) Oligomerization of a membrane protein correlates with its retention in the
Golgi complex, J. Cell Biol. 122, 1185- 1196.
32. Bergzron, J. J. M., Brenner, M. B., Thomas, D. Y. & Williams, D.
B. (1994) Calnexin: a membrane-bound chaperone of the endoplasmic reticulum, Trends Biol. Sci. 19, 124-128.