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Measurement of Protein Charge and Ion Binding
Measurement of Protein Charge and Ion Binding
60 A to minimize Joule heating. pH changes during electrophoresis were less than 0.05 unit due to the added buffer and the
short times required for data acquisition. Runs performed without
buffering and/or hydrodynamic mobilization had unacceptable pH
variations.
The migration of the protein and neutral marker through the
negatively charged silica capillary was dominated by the electroosmotic flow; thus the field polarity was chosen so that the
direction of the electroosmotic flow was back toward the detector;
i.e., the sample injection end of the capillary was maintained as
the cathode. The field polarity was reversed for the CElect Amine
capillary, which has a strong positive charge. The situation was
more complex for the weakly charged polyacrylamide-coated
capillary. Since the capillary has a small negative charge, the
sample injection end of the capillary was maintained as the cathode
whenever the electroosmotic flow dominated the migration or
when the protein migrated in the same direction as the electroosmotic flow (i.e., when the protein is positively charged). However,
above pH 5.4, the protein had a sufficient negative charge that its
electrophoretic velocity was opposite to, and greater than, the
electroosmotic flow. The field polarity under these conditions was
thus reversed, with the injection end of the capillary maintained
as the anode. Note that this made it necessary to run the protein
and neutral marker separately, using opposite field polarity for
the two runs. The protein and neutral marker could be run
simultaneously under conditions where the electroosmotic velocity
was much higher than the protein migration velocity, yielding the
protein migration velocity and the electroosmotic flow velocity in
a single run. However, under conditions of low protein migration
velocity, much better peak resolution and more accurate mobility
data were obtained by running the protein and neutral marker
separately. This also allowed the time for the electrophoretic
migration of the protein and marker to be optimized individually.
These experiments were performed with the neutral marker
injected into the capillary immediately after completing the protein
run, without any flushing of the capillary. This essentially
eliminated any changes in the magnitude of the electroosmotic
flow between runs.
Data Analysis. The mean velocity during the hydrodynamic
mobilization was evaluated directly from the time, t1, at which the
protein peak first passed the detector:
Vh )
Ld
(1)
t1 + (tinj/2)
h ) Vh(t2 - t1)
(2)
Vprotein )
t2 - t 1
h
) Vh
t
t
(3)
U)
2
f (a)
3 1
(4)
F2
RT
2 1/2
izi
(5)
1
5
1
1
(a)2 (a)3 (a)4 +
(a)5 +
16
48
96
96
a exp(-t)
1
1
(a)4 (a)6 exp(a)
dt (6)
8
96
t
f1(a) ) 1 +
Z ) 4a(1 + a)/e
(7)
1583
DISCUSSION
The capillary electrophoresis technique described in this study
provides a rapid, accurate, and reliable means to measure the
mobility and in turn the net protein charge in different solution
environments. The method requires extremely small amounts
of protein (picogram quantities and nanoliter volumes) and is
easily automated, making it very suitable for protein characterization, ion binding studies, and initial screening of possible separation techniques that exploit differences in electrostatic interactions.
ACKNOWLEDGMENT
This work was supported in part by a grant from Genentech
Inc., Millipore Corp., and the Delaware Research Partnership
Program.
Received for review August 18, 1997. Accepted January
29, 1998.
AC970902R