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Bbra Volume12 Issu03 p2007-2016
Bbra Volume12 Issu03 p2007-2016
12(3), 2007-2016
DOI: http://dx.doi.org/10.13005/bbra/1868
The majority of microorganisms occur, important that they and the microbes which
both in terms of numbers and diversity, in what produce them bee intensively studied. Enzymes
can be termed moderate environments. Microbes obtained from alkaliphiles are stable when added
also occur generally with less diversity and in lower to detergents because of their inherent tolerance
numbers in so-called extreme environments on to high pH; they can also generally function in the
Earth in which life was previously thought to be presence of bleach. Enzyme based detergents can
restricted or absent prevent the existence of life. also generally function at lower temperatures that
Extremophilic microorganisms exhibit the ability equivalent chemical detergents and are generally
to grow at the limits of a variety of environmental available at lower cost. Put simply, they are
factors, which critically influence growth, such as generally cheaper and not require high
pH, salinity, temperature and pressure; the temperatures to provide efficient washing 2
organisms which grow in such environments are Alkaliphilic microorganisms are found not
respectively called alkaliphiles, halophiles, only found in environments having neutral or high
thermophiles and acidophiles, 1, 2 pH but can also be isolated from acidic soils 3,
Since, alkaline enzymes play a major role probably because soils having areas which have a
in the global enzyme market, it is obviously bulk pH which is neutral or acidic also possess
localised alkaline pockets in which alkaliphiles can
thrive. Enzymes from these microorganisms have
found major commercial applications such as
* To whom all correspondence should be addressed. providing additives to laundry detergents, for use
E-mail: dr.arunmicro@gmail.com
in efficient food processing, in the finishing of
2008 CHINNATHAMBI, Biosci., Biotech. Res. Asia, Vol. 12(3), 2007-2016 (2015)
fabrics, and for use in the pulp and paper Alkaliphiles consist of two main
industries. physiological groups of microorganisms;
Here i will highlight the main enzymes alkaliphiles and haloalkaliphiles. Alkaliphiles
which are derived from alkaliphiles and discuss require an alkaline pH of 9 or more for their growth
their industrial application. and have an optimal growth pH of around 105.
Definition - Alkaliphiles Haloalkaliphiles, in contrast, require both an
A number of microorganisms exhibit alkaline pH (pH 9) and high salinity (up to 33%
more than one pH optimum for growth depending NaCl). Alkaliphiles have been isolated mainly from
on the prevailing growth conditions, particularly neutral environments, sometimes even from acidic
in relation to nutrients, metal ions and soil samples and feces. Haloalkaliphiles are mainly
temperature. Alkaliphiles are microorganisms that found in extremely alkaline saline environments,
grow well, or optimally at pH values above 9, often such as the Rift Valley lakes of East Africa and the
between 10 and 12, but do not grow at the near western soda lakes of the United States6,7.
neutral pH of 6.5 3 (Fig. 1) Distribution of alkaliphiles
Alkaliphiles have a world-wide
distribution in, deep sea, alkaline lake, sub-ground
soils and etc. They include, amongst other bacterial
groups, aerobic spore-formers, anaerobic non-
spore-formers, halophiles, thermophiles, archaea,
psychrophiles and piezophile; alkaliphiles fungi,
yeast and phages have also been isolated.
Naturally occurring alkaline
environments, such as carbonate springs, alkaline
soils, and soda lakes, are characterized by their
high values (pH 8.011.0) due to the presence of
high concentrations of sodium carbonate salts
which are generally formed by evaporative
concentration8. The Egyptian hyper saline soda
lakes in the Wadi Natrun area (3015N, 3030E)
Fig. 1. pH dependent growth of alkaliphic
are an excellent example of these hitherto
microorganism. Squares represent
unexplored alkaline ecosystems. The following
neutrophiles and circle represents alkaliphiles3
figure shows the relationship between soil pH and
the distribution of alkaliphiles (Fig. 2).
Background of the study
Few papers on alkaliphiles were published
during in the late nineteen sixties, but since then
interest in this group, particularly in relation to
their ability to produce industrially useful enzymes
has burgeoned. The first paper reporting the
production of a alkaline enzyme by an alkaliphilic
microorganism appeared in 19714. Traditionally, the
Japanese used indigo to dye cloth which had been
naturally reduced under alkaline conditions in the
presence of slaked lime, wood ash and Japanese
sake. Indigo derived from indigo leaves is reduced
by particular bacteria that grow under these highly
alkaline conditions in a traditional process called
indigo fermentation. The most important factor
in this process is pH control which was formerly
controlled by the skill of craftsmen. Fig. 2. Distribution of
alkaliphiles in soil in relation to pH
CHINNATHAMBI, Biosci., Biotech. Res. Asia, Vol. 12(3), 2007-2016 (2015) 2009
which can diminish indigo back staining under xylan contains many side chains, several enzymes
higher pH, are recommended for further are required to act in a synergistic fashion to effect
improvement of the process38. complete hydrolysis of the substrate.
Lipase Pectinase
Lipases cause hydrolysis of triglycerides Pectinolytic enzymes (pectinases), which
releasing fatty acids and glycerol. They can also degrade pectic polysaccharides such as pectin and
catalyze the reverse esterification reactions, thus pectic acid, are distributed in microorganisms and
producing glycerides from glycerol and fatty acids. higher plants but not higher animals. Microbial
Many lipases are also involved in the catalysis of pectinases are widely used in the fruit- and
trans-esterification reactions and enantioselective vegetable-processing industries. Recently, a novel
hydrolyses39,40,41,42. Most commercial lipases are field of application is envisaged for pectinases in
obtained from fungi (mainly Rhizopus, Candida, the production of oligosaccharides as functional
and Rhizomucor) and bacteria (Pseudomonas and food components49. Fogarty and coworkers50, 33
Chromobacterium)43. The optimum pH of the two have also reported that Bacillus sp. strain RK9
lipases was 9.5. Both enzymes were inhibited by produces an endopolygalacturonate lyase, whose
bile salts such as sodium cholate, sodium optimum pH for the enzyme activity toward acid-
deoxycholate, and sodium taurocholate at soluble pectic acid was 10.0.
0.25%.Although the initial motivation for studying Bacteria secreting alkaline pectinase were
alkaline lipase was its application to detergents, first used in the retting process of Mitsumata bast52.
many alkaline lipases are significantly inhibited in Alkaliphilic bacterial strain NT-33 can also degum
the presence of either alkylbenzene sulfate or ramie fibers53 and the retting process of a type of
dodecyl benzene sulfonate 3 . Watanabe 44 Japanese paper has been improved considerably
conducted an extensive screening for alkaline by the use of alkaline pecticlyase (optimal pH of
lipase-producing microorganisms from soil and 9.5) from Bacillus sp. strain GIR 277; this use leads
water samples. Two bacterial strains were selected to the production of stronger, better quality paper.
as potent producers of alkaline lipase. These were Polysaccharide-degrading enzymes from alkaliphilic
identified as Pseudomonas nitroreducens nov. bacteria have been studied for their effectiveness
subsp. thermotolerans and P. fragi. Wang45 then in degumming of ramie fibers54 and thermoalkali-
produced thermostable alkaline lipase from a newly stable polygalacturonase from Bacillus sp. MG-
isolated thermophilic Bacillus, strain A30-1 (ATCC cp-2 are used for similarly treating ramie and sunn
53841). The organism grew optimally at 60-65C hemp fibers55 .
and in the pH range of 6-9. It was characterized as Catalase
a Bacillus species. Catalases are classified into:
Xylanase monofunctional catalases, catalase-peroxidases
The first paper of xylanase production by with dual functionality, non-heme catalases, and
an alkaliphilic bacteria was published in 1973 by minor catalases. In addition there exist minor
Horikoshi and Atsukawa46. Okazaki reported that catalases, such as chloroperoxidase and plant
four thermophilic alkaliphilic Bacillus stains (Wl peroxidases, are heme-containing proteins.
(JCM2888), W2 (JCM2889), W3 and W4) produced Monofunctional catalases comprise the largest
xylanases47 . The pH optima for enzyme action of group and are produced by most aerobic
strains Wl and W3 was 6.0 and for strains W2 and Prokaryotes and Eukaryotes. Structurally, they are
W4 was found to be between 6 and 7. The enzymes homotetramers with four prosthetic heme groups
are stable between pH 4.5 and 10.5 at 45C for 1 h. and range in size from 200 to 340 kDa. The catalase-
The optimum temperatures of xylanases of Wl and peroxidases are homodimeric heme-containing
W3 is 65C and those of W2 and W4, 70C. The proteins of sizes 120340 kDa and display both
degree of hydrolysis of xylan is about 70% after 24 catalase and peroxidase activities. Peroxidase (EC
h incubation. The purified enzyme of Bacillus sp. 1.11.1.7) function results in the reduction of H2O2
No. C- 59-2 exhibits a broad optimum pH ranging to H2O utilizing organic substances as electron
from 6.0 to 8.0. Xylanases are hydrolases with a donors56. Non-heme catalases contain manganese
substantial market value of US $200 million48. Since (and not heme) in their active sites and have been
CHINNATHAMBI, Biosci., Biotech. Res. Asia, Vol. 12(3), 2007-2016 (2015) 2013
isolated from diverse groups of bacteria; catalases thermoalkali stable types, means that these
find biotechnological applications in the food, enzymes are likely to continue to play an important
medical, and textile industries57. role in textile and food-processing industries;
Catalase (EC 1.11.1.6) is an anti-oxidant genetic and protein engineering techniques are also
biocatalyst facilitating the conversion of H2O2 to likely to bring about desirable changes in the
O2 and H2O58, and is produced in response to properties of catalases, making them even more
oxidative stress or due to presence of ROS59. useful for use in industry.
Aerobic organisms utilize oxygen to facilitate Chitinase
efficient metabolism of nutrients. However, during Chitinous waste (chiefly from the seafood
this process, oxidants (collectively called reactive industry) needs to be recycled to maintain the
oxygen species or ROS) are formed. The ROS are carbonnitrogen balance in the environment64.
formed due to incomplete reduction of oxygen60. Tsujibo65 isolated two types of chitinases from the
Such oxidants can cause damage to lipids, proteins, alkaliphilic Nocardiopsis albus subsp. prasina
and nucleic acids, as a result, microorganisms OPC-131. The optimum pH of chitinase A was pH
produce antioxidants in the form of enzymes and 5.0, and that of chitinase B was pH 7.0. Later,
other molecules to reduce the levels of ROS60.. Bhushan and Hoondal66 isolated the alkaliphilic,
Allgood and Perry61 in 1986 reported that chitinase-producing Bacillus sp. strain BG-11. The
thermo and alkali-stable catalases such as that purified chitinase from this organism exhibited a
produced by Thermoleophilum album. Yumotos broad pH and temperature optima of 7.5 to 9.0 and
group, in 1990, had reported of alkaliphilic Bacillus 45 to 55C, respectively, and the enzyme was found
YN-2000 secreting a catalase that showed to be stable between pH 6.0 and 9.0 at 50C for
substantial peroxidase as well as catalase activity. more than 2 h. Ag1, Hg21, dithiothreitol, -
The catalase quantity was found to be elevated mercaptoethanol, glutathione, iodoacetic acid, and
when cells were grown at pH 10.0 than at lower pH iodoacetamide inhibit the activity of the enzyme
ranges of 7.09.0. Hicks62 observed that cells of B. up to 50%. Chitinase characteristics of
firmus OF4, a facultative alkaliphile, showed twice gammaproteobacteria (obtained from an alkaline,
the specific activity for catalase when grown at pH hypersaline lake) and from a metagenomic library
10.5 compared to when grown at pH 7.5. (estuarine bacteria) have been studied using
Nevertheless, the cells grown at pH 10.5 showed fosmids, the latter are f-factor cosmids capable of
more sensitivity to exogenous hydrogen peroxide. containing up to 50-kb DNA. The enzymes from
In the facultative psychrophile Vibrio rumoiensis the alkaline lake organisms showed distinctive
S-1T, isolated from an H2O2-rich location63, the adaptations making them haloalkali tolerant.
catalase activity was found to be 527,500 U mg
protein-1, and was faster than that of bovine liver CONCLUSIONS
catalase. The catalase functioned optimally at
broad pH ranges (6.010.0). Subsequently, The major applications of these enzymes
Phucharoen57 isolated an alkali- and halo-tolerant have a great economic potential in several industrial
bacterium Halomonas sp. SK1, which produced a processes such as detergent industry, food
catalase with high specific activity (57,900 U mg industry, leather processing, chemical synthesis,
protein-1). This activity was twice as high as pharmaceutical applications and waste
bovine liver catalase and the enzyme was active management. A number of microbial sources exist
over pH ranges of 5.011.0 with optimal activity at for the efficient production of this enzyme, but
pH 10.0. They concluded that use of the catalase only a few selected strains of alkaliphiles to meet
had a noticeable and enhanced effect on the the criteria for commercial production. In order to
dyeing process in addition to improved color yield. achieve the efficient, large-scale manufacture, the
There was also added simplicity of application structural and functional relationships of
since the catalase could be used in the dyeing alkaliphiles organisms have to be identified in detail.
bath right after bleaching, leading to lesser This will lead to improving the stability of the
washing, water consumption, and effluent volume. existing enzymes and discovery of several novel
The varied properties of catalase, notably the ones.
2014 CHINNATHAMBI, Biosci., Biotech. Res. Asia, Vol. 12(3), 2007-2016 (2015)
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