3.

Analisis korelasi-kofenetik
Perbandingan hasil analisis koefisien korelasi antara matriks similaritas unsorted dan
matriks similaritas sorted Simple matching Coefisient (Ssm) dan Jaccard's Coefisien (Sj)
a. Simple matching Coefisien (Ssm) = 0.703431354 = 70,34 %
b. Jaccard's Coefisien (Sj) = 0.847290695 = 84,72 %

4. Analisis cluster

Analisis cluster Jaccards Coefficient

Objects
Node Group 1 Group 2 Simil. in group
1 NF1-04 NF2-04 0,727 2
2 NF5-03 NA2-05 0,636 2
3 NF5-03 Node 2 0,583 3
4 Node 3 NF7-K 0,528 4
5 Node 4 NF6-05 0,452 5
6 NF3-04 Node 5 0,429 6
7 NA2-04 NA1-04 0,417 2
8 Node 1 NA3-04 0,417 3
9 Node 6 NF4-05 0,356 7
10 Node 7 Node 8 0,335 5
11 Node 10 Node 9 0,301 12
12 Node 11 NA4-04 0,141 13

Analisis cluster Simple Matching Coefficient

Objects
Node Group 1 Group 2 Simil. in group
1 NF1-04 NF2-04 0,889 2
2 NA1-05 NA2-05 0,852 2
3 NF5-03 Node 2 0,815 3
4 NA3-04 NA1-04 0,778 2
5 Node 3 NF7-K 0,778 4
6 NA2-04 Node 4 0,741 3
7 Node 5 NF6-05 0,741 5
8 NF3-04 Node 7 0,711 6
9 Node 6 Node 1 0,685 5
10 Node 8 NF4-05 0,673 7
11 Node 9 NA4-04 0,652 6
12 Node 11 Node 10 0,631 13
6. Dendogram

a. Dendogram Jaccards Coeffisient

Keterangan:
a = NA2-04 = Flavobacterium
b = NF1-04 = Azotobacter
c = NA3-04 = Rhizomonas
d = NA4-04 = Acinetobacter
e = NA1-04 = Alcaligens
f = NF2-04 = Serpens
g = NF3-04 = Enhydrobacter
h = NF4-05 = Bacillus
i = NF5-03 = Azotobacter
j = NF6-05 = Xanthomonas
k = NF7-K = Enhydrobacter
l = NA1-05 = Alcaligenes
m = NA2-05 = Enterobacter

b. Dendogram Simple Matching Coefficient

7. Error Test
Varian tes individual antara organisme replikasi:
Si2 = n/2t, dengan n adalah jumlah OTU dan t adalah jumlah total strain
Si2 = 27/(2x13)