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European Journal of Medicinal Chemistry
European Journal of Medicinal Chemistry
European Journal of Medicinal Chemistry
Mini-review
a r t i c l e i n f o a b s t r a c t
Article history: CXCR4 (C-X-C Chemokine Receptor type 4) and its natural ligand SDF-1a (Stromal-Derived-Factor-1a) are
Received 26 June 2017 involved in a number of physiological and pathological processes including cancer spread and pro-
Received in revised form gression. Over the past few years, numerous CXCR4 antagonists have been identified and currently are in
9 August 2017
different development stages as potential agents for the treatment of several diseases involving the
Accepted 10 August 2017
CXCR4/SDF-1a axis. Herein, we focus on small molecules reported in literature between 2013 and 2017,
Available online 12 August 2017
claimed as CXCR4 antagonists and potentially useful in the treatment of cancer and other diseases where
this receptor is involved. Most of the compounds resulted from a chemical optimization of previously
Keywords:
CXCR4
identified molecules and some of them could represent suitable candidates for the development of
Small molecules advanced anticancer agents.
Antagonists © 2017 Elsevier Masson SAS. All rights reserved.
Cancer
http://dx.doi.org/10.1016/j.ejmech.2017.08.027
0223-5234/© 2017 Elsevier Masson SAS. All rights reserved.
520 F. Grande et al. / European Journal of Medicinal Chemistry 139 (2017) 519e530
2. CXCR4 antagonists
FC131 has been adopted as a suitable lead for the design of novel
CXCR4 antagonists, in which various modifications of both the Nal
and Tyr residues were attempted. Moreover, the replacement of
Arg1 with the N-methyl-D-arginine led to the most potent deriva-
tive FC122 [43].
A small library of pentapeptide derivatives was accordingly
prepared and tested in a functional competitive assay that
measured inhibition of SDF-1a-induced activation of human
CXCR4. The chemical structures of the most active compounds are
reported in Fig. 4 (compounds 1e7). Further development of SAR
studies suggested that simpler peptidomimetics CXCR4 antagonists
could be designed starting from the Arg2-2-Nal3 fragment [44].
2.2. Tripeptidomimetics
Fig. 3. Co-crystallized structure of CXCR4 with the known ligand IT1t.
Successively, in-depth SAR studies on cyclopentapeptide CXCR4
antagonists proved that the tripeptide motif L-/D-Arg1-Arg2-2-
distinct classes.
Nal3 represents the minimal peptide sequence for the antago-
nistic activity. Thus, a systematic synthetic elaboration of the
2.1. Cyclopentapeptides sequence led to the identification of a series of constrained tri-
peptidomimetics, still endowed with CXCR4 antagonist activity.
Previous studies led to the discovery of a potent antagonist, These compounds were characterized by a dioxohexahydropyr-
FC131 (cyclo(-Arg1-Arg2-2-Nal3-Gly4-D-Tyr5-), 2-Nal ¼ 3-(2- azinothiazine bicyclic central core, bringing two tails ending with a
naphthyl)alanine) (Fig. 4), the structure of which was deducted guanidine residue and a third tail containing a naphthyl system
from extensive SAR studies based on a pharmacophore model (Fig. 5, compounds 8 and 9). Although the potency of such new
containing the Arg2-Nal3-D-Tyr5-Arg14 sequence. More recently, derivatives resulted lower than the cyclopeptides, as determined by
Fig. 4. Structures of FC131 and most active cyclopentapeptide analogues with relative EC50 calculated by a functional competitive assay against COS-7 cells.
522 F. Grande et al. / European Journal of Medicinal Chemistry 139 (2017) 519e530
Fig. 5. Representative structures of tripeptidomimetics with relative EC50 calculated by a functional competitive assay against COS-7 cells.
a functional assay, they could represent suitable starting points for tripeptidomimetic antagonist KRH1636 to CXCR4 was assessed by
the development of specific and less bulky CXCR4 ligands [45]. A the combination of SAR, receptor mapping, and molecular docking
further development of this study focused on the length of the studies (Fig. 6). Accordingly, a small series of tripeptide analogues
three side chains of these compounds. It was demonstrated that the has been synthesized and their antagonistic potency was calculated
optimal spacer between the central core and both the guanidine in a functional inhibition assay measuring the SDF-1a mediated
moieties consists of a three-carbon atoms chain. On the other hand, activation of CXCR4. As a result, the identification of a binding
the distance between the naphthyl group and the bicyclic core must model resulted from the inspection of interactions with the re-
kept in a two-carbon spacer, whereas a one-carbon spacer is ceptor providing new insight for structure-based design of novel
tolerated when a bromine atom was present on the aromatic sys- small-molecule CXCR4 antagonists [34]. The chemical structures of
tem, as calculated by functional antagonistic assay on a diastereo- the most promising derivatives are depicted in Fig. 6 (compounds
isomeric mixture of bromine derivative 10 (Fig. 5) [46]. 11e15).
In a recent study, the binding of a previously described
Fig. 6. Chemical structures of selected KRH1636 tripeptidomimetic analogues with relative EC50 calculated by a functional competitive assay against COS-7 cells.
F. Grande et al. / European Journal of Medicinal Chemistry 139 (2017) 519e530 523
2.3. Indoles
Fig. 9. Structure of the most active tetrahydroquinoline based compounds with relative IC50 calculated by a calcium flux/release assay in Chem-1 cells.
Fig. 12. Structures of representative examples of symmetrical and unsymmetrical p-xylylenediamine based CXCR4 antagonists with relative EC50 calculated by a MTT assay against
MT-4 cells.
Fig. 14. Structures of selected p-xylylene based CXCR4 antagonists with relative EC calculated by a rhodamine binding assay against MDA-MB-231 breast cancer cells.
Fig. 15. Structures of the most active sulfonamide derivatives with relative EC calculated by a rhodamine binding assay against MDA-MB-231 breast cancer cells.
quinazoline system as one side chain, while in the second series the a commercially available compound, has been proved as an effec-
quinazoline was replaced by a substituted purine. The other side of tive agent able to mobilize hematopoietic stem/progenitor cells by
the molecule contains a cyclohexylamine propyl fragment in all the a mechanism involving the inhibition of the SDF-1a/CXCR4 axis.
derivatives (Fig. 17, compounds 53e58). Me6TREN promoted a significant inhibition of SDF-1aeinduced
The most active analogue 58, belonging to the purine series, chemotaxis in cells based assay (Fig. 19) [61].
showed a remarkable CXCR4 binding affinity with an IC50 value of A trisubstituted amine derivative, 3-((((1-cyclopentylpiperidin-
4.2 nM, thus representing a promising starting point for the 3-yl)methyl)(2-(piperidin-1-yl)ethyl)amino)methyl)phenol (CX6),
development of potent CXCR4 antagonists [59]. was selected after a computational search throughout a library as
The same research group designed and synthesized a series of an ideal small molecule CXCR4 antagonist (Fig. 20). The search was
novel symmetrical compounds characterized by a p-xylylene or a conducted on the base of the shape of the known IT1t CXCR4 in-
2,6-pyridil central core bearing, as a structural novelty, a tertiary hibitor (Fig. 2) as a reference and employing various algorithms
amine on both sides of the molecule. The significant CXCR4 against the IT1t/CXCR4 complex crystal structure. A number of
antagonistic effect was successfully retained, since ten derivatives molecules has been accordingly synthesized and tested against
showed potent binding affinity with EC50 values from 1 to 100 nM. U373-MAGI cells leading to compound CX6 as the most promising
Some of the synthesized compounds were also found to be able to candidate. In fact, CX6 showed to be able to inhibit Ca2þ flux elicited
significantly limit tumor cell invasion, with inhibitory rates ranging by SDF-1a with an IC50 value of 92 nM [62].
from 65% to 100%. These results clearly showed that tertiary amines
linked to the central core play a crucial role for the interaction with
the receptor and thus leading to an improved antagonistic activity. 2.7. Oxadiazolepyrimidine
The chemical structures of the most promising derivatives are
depicted in Fig. 18 (compounds 59e64) [60]. A new class of small molecule CXCR4 antagonists based on the
use of computational modelling studies combined with in vitro
evaluation of SDF-1a -induced intracellular calcium mobilization,
2.6. Trisubstituted amines proliferation and chemotaxis was discovered. The lead compound,
ICT5040, a 2-(pyridin-3-yl)-1,3,4-oxadiazole derivative, was shown
Some trisubstituted amine derivatives were known to be to inhibit SDF-1a induced intracellular calcium mobilization, with
capable of inhibiting the SDF-1a/CXCR4 axis provoking different an IC50 value of 3.8 mM, and was opportunely used for chemical
effects on haematopoiesis, stem cells mobilization and cancer. The optimization. A series of analogues with improved anti-migratory
potent previously mentioned tetrahydroquinoline derivative potency was then obtained and the most representative deriva-
AMD070 (Fig. 2) is also referable to this class of compounds. tive was identified as the soluble analogue 65, which resulted very
Recently, tris-[2-(dimethylamino)ethyl] amine (Me6TREN, Fig. 19), potent in inhibiting SDF-1a induced intracellular calcium
Fig. 17. Quinazoline or purine containing p-xylylene derivatives with relative IC50 calculated by a cytotoxic assay against CEM cells.
528 F. Grande et al. / European Journal of Medicinal Chemistry 139 (2017) 519e530
Fig. 18. Representative examples of active symmetrical CXCR4 antagonists with relative EC calculated by a rhodamine binding assay in MDA-MB-231 breast cancer cells.
3. Conclusion
Fig. 21. Representative examples of oxadiazolepyrimidine CXCR4 antagonists with relative IC50 calculated by MTT assay against U87-MG cells.
F. Grande et al. / European Journal of Medicinal Chemistry 139 (2017) 519e530 529
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