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ARTICLE IN PRESS

WAT E R R E S E A R C H 41 (2007) 3716– 3728

Available at www.sciencedirect.com

journal homepage: www.elsevier.com/locate/watres

Monitoring source water for microbial contamination:


Evaluation of water quality measures

Jeanine D. Plummera,, Sharon C. Longb


a
Department of Civil and Environmental Engineering, Worcester Polytechnic Institute, 100 Institute Road, Worcester, MA 01609, USA
b
Department of Soil Science and Wisconsin State Laboratory of Hygiene, 263 Soils Building, 1525 Observatory Drive,
Madison, WI 53706, USA

ar t ic l e i n f o abs tra ct

Article history: Watershed management programs often rely on monitoring for a large number of water
Received 13 January 2007 quality parameters to define contaminant issues. While coliforms have traditionally been
Received in revised form used to identify microbial contamination, these indicators cannot discriminate among
30 April 2007 potential contaminant sources. Microbial source tracking (MST) can provide the missing
Accepted 6 May 2007 link that implicates the sources of contamination. The objective of this study was to use a
Available online 22 May 2007 weight-of-evidence approach (land use analysis using GIS, sanitary surveys, traditional
Keywords: water quality monitoring, and MST targets) to identify sources of pollution within a
Watershed watershed that contains a raw drinking water source. For the study watersheds, statistical
Water quality analyses demonstrated that one measure each of particulate matter (turbidity, particle
Rhodococcus coprophilus counts), organic matter (total organic carbon, dissolved organic carbon, UV254 absorbance),
Bifidobacteria and indicator organisms (fecal coliforms, enterococci) were adequate for characterizing
Coliphages water quality. While these traditional parameters were useful for assessing overall water
Microbial source tracking quality, they were not intended to differentiate between microbial sources at different
locations. In contrast, the MST targets utilized (Rhodococcus coprophilus, sorbitol-fermenting
Bifidobacteria, and male-specific coliphages) pinpointed specific sources of microbial
pollution. However, these targets could not be used for routine monitoring due to a high
percentage of non-detects.
& 2007 Elsevier Ltd. All rights reserved.

1. Introduction monitoring plans are needed to identify pollutant sources


and develop appropriate remediation strategies.
The multiple barrier approach to providing safe drinking Monitoring programs often include a large number of water
water includes source water protection, treatment, and quality parameters in order to fully capture contaminant
maintenance of distribution system integrity. Development issues in a watershed. Physical and chemical parameters of
of watershed management programs relies on an under- interest include pH, temperature, dissolved oxygen (DO),
standing of the impact of watershed activities and land uses organic matter, particulate matter, and specific conductance.
on receiving water quality. Human impacts pose a threat to Indicator organisms, such as total and fecal coliforms, are the
maintenance of water quality due to contaminant introduc- most commonly used measures of microbiological quality.
tion. While land acquisition can permanently avoid these However, the use of coliforms as an indicator organism has
issues, increasing population pressures make this a non- been questioned because pathogens have been isolated when
viable option in many watersheds. Therefore, watershed there have been low concentrations of fecal coliforms, and

Corresponding author. Tel.: +1 508 831 5142; fax: +1 508 831 5808.
E-mail address: jplummer@wpi.edu (J.D. Plummer).
0043-1354/$ - see front matter & 2007 Elsevier Ltd. All rights reserved.
doi:10.1016/j.watres.2007.05.004
ARTICLE IN PRESS
WAT E R R E S E A R C H 4 1 (200 7) 371 6 – 372 8 3717

many viruses and protozoan cysts are more resistant to human-impacted samples (Mara and Oragui, 1983). In Africa,
disinfection than coliforms (AWWA, 1999). Coliform enu- Jagals et al. (1995) detected sorbitol-fermenting Bifidobacteria
meration does not have the ability to discriminate among at densities of hundreds to thousands per 100 mL downstream
potential sources of microbial contamination (Sinton et al., from human settlements with limited sanitation, with no
1998). Microbial source tracking (MST) can provide the detection upstream. In Massachusetts, USA, sorbitol-fermenting
missing link that implicates the sources of contamination. Bifidobacteria were detected in tributary samples from neighbor-
MST can be library independent or library based, and hoods served by aging septic systems and were absent from
involves the measurement of targets that are highly asso- areas distant from potential sewage inputs (Long et al., 2003).
ciated with fecal contamination from a certain source Research has consistently shown that R. coprophilus is
(Simpson et al., 2002). Understanding the origin of fecal present in the feces of herbivores such as cows, donkeys,
pollution allows for appropriate, targeted remedial measures goats, horses, and sheep, but is absent from the feces of
(Gilpin et al., 2003). Based on target, four major approaches to humans (Mara and Oragui, 1981; Jagals et al., 1995; Long et al.,
MST have emerged: chemical methods, phenotypic methods, 2002; Gilpin et al., 2003). It has also been isolated from the
host-specific methods, and molecular-based methods. feces of poultry reared in close proximity to farm animals,
This study focused on host-specific indicators, defined as and from fresh waters and wastewaters contaminated by
library-independent MST targets that are shed/associated animal fecal material (Mara and Oragui, 1981, 1983). Based on
with a specific host species such as humans but no others. these findings, R. coprophilus has been suggested as an
Many host-specific MST methods can be conducted using indicator of grazing animal contamination. The long environ-
standard bacteriological methods, which tend to be reprodu- mental persistence of R. coprophilus, up to 120 days, could be a
cible across investigations and utilize equipment and ex- problem because its presence would not necessarily indicate
pertise typically available at water utility laboratories. The recent fecal pollution (Oragui and Mara, 1983). Thus, locating
cost for performing these methods is relatively low compared sample sites upstream and downstream of potential animal
to other methods (Sinton et al., 1998). In addition, if a host- sources could overcome this limitation.
specific method is culture based, it provides a measure of Male-specific (F-specific) coliphages have rarely been de-
viable indicators. If environmental stresses have not inacti- tected in individual human feces samples (Dhillon et al., 1976;
vated the MST indicator, there is a potential that associated Osawa et al., 1981; Havelaar et al., 1986, 1990). Havelaar et al.
pathogens may not have been inactivated either. However, (1986) found F+RNA phages in the feces of pigs, broiler
further studies are necessary to determine specific infection chickens, sheep, and calves, but not in the feces of dogs,
risk associations between indicators and pathogens. cows, or horses. The proportion of human and animal
Successful implementation of source tracking has been populations that carry F-specific coliphages are the order of
demonstrated in several US watersheds, including Holmans a few percent; however, sewage, which is a composite of
Creek, Virginia; Kensico Reservoir, New York; and Homosassa materials from populations of typically 100 s of connections
Springs, Florida (Dart and Wiggins, 2003; Alderisio et al., 1996; or more, always tests positive for F-specific coliphages (Long
Griffin et al., 2000). Worldwide, MST has been applied with et al., 2005a; Blanch et al., 2006).
some success in locations such as Australia (Ashbolt, 2005; Pollution sources can be identified as human or non-human
Ahmed et al., 2006), Spain, and the United Kingdom (Payan by F+RNA subgroup classification via either serotyping or
et al., 2005). genotyping. Both of these methods have demonstrated
Among the host-specific or library-independent methods, promising results in the differentiation of F+RNA environ-
the fecal coliform/fecal streptococcus (FC/FS) ratio, which is mental isolate subgroups (Havelaar et al., 1990; Hsu et al.,
based on the hypothesis that different animals excrete fecal 1995; Sobsey et al., 1995). F+RNA coliphages may be classified
coliforms and fecal streptococci in different quantities, has into four subgroups (Furuse, 1987): subgroups II and III tend to
been strongly criticized due to inconsistent relationships be isolated from human feces and wastewater; subgroup I is
between the ratio and pollution sources (Pourcher et al., 1991; usually isolated from the feces of non-human mammals and
Howell et al., 1995; Anderson et al., 1997). Other organisms birds; and subgroup IV phages are of mixed origin but mostly
reported to be host specific include Clostridium perfringens, animal. These groupings can be applied as a general rule, but
Bacteroides spp., and phages of Bacteroides fragilis (Savichtcheva are not absolute. Recent research demonstrated that the
and Okabe, 2006). With the exception of Bacteroides spp., associations of F+RNA coliphage groups applied to 103 human
host-specific MST targets can be analyzed using culture- wastewaters tested, but failed for 35% of the 82 animal
based or molecular-based methods. This study used sorbitol- samples tested (Blanch et al., 2006). However, the samples
fermenting Bifidobacteria, Rhodococcus coprophilus, and F+RNA tested by Blanch et al. (2006) were composites and not
coliphage groups. individual fecal samples. All samples classified as human
Sorbitol-fermenting Bifidobacteria can be used to identify the were in fact wastewater and samples classified as animal
presence of human fecal or domestic wastewater pollution included slaughterhouse effluent or farm slurries.
because of its higher specificity to human fecal sources While MST targets may identify the origin of fecal inputs,
(Resnick and Levin, 1981; Mara and Oragui, 1983). As an many of the targets are not suitable for routine monitoring
obligate anaerobe, it is unlikely to multiply in environmental because of a high percentage of non-detects or because of the
waters and has exhibited short survival periods in the extra- relatively long analysis times required, up to 3 weeks for
intestinal environment (Mara and Oragui, 1983). Prior some targets. For example, the culture-based method for
research has demonstrated that sorbitol-fermenting Bifidoba- R. coprophilus requires a 10–14-day incubation of MM3 plates,
cteria were consistently isolated only from human and followed by 4 days of exposure to light for proper colony color
ARTICLE IN PRESS
3718 WAT E R R E S E A R C H 41 (2007) 3716– 3728

development before plate counts can be completed (Long surrounding communities. Table 1 shows the distribution of
et al., 2002). Therefore, the objective of this study was to use a land uses within each subwatershed. Both subwatersheds
weight-of-evidence approach (land use analysis using GIS, consist predominantly of forested and open land, followed by
sanitary surveys, traditional water quality monitoring, and residential development. Twenty-five percent of the Malagas-
MST targets) to identify sources of pollution within a co Brook sub-basin is under residential development, includ-
watershed from which raw drinking water is obtained. The ing 6% identified as high-density residential (highest absolute
suite of tools was evaluated for its ability to assess land use area in the Reservoir District). A large multi-unit housing
impacts in general and for defining specific microbial sources. complex, comprised of more than 100 units in 24 buildings, is
Both of these objectives were aimed at providing manage- the dominant development in the sub-basin. Beaman Pond
ment agencies with the information necessary to focus Brook sub-basin has the third highest percentage of residen-
remediation efforts on critical microbial sources in a tial development in the Reservoir District (predominantly
watershed. medium density) and as a result has the third highest
percentage of impervious surfaces as well. This is significant
as impervious surfaces reduce infiltration rates and increase
2. Materials and methods runoff of pollutants. As little as 20% impervious surfaces can
highly degrade receiving water quality (Schueler, 1994; Mallin
This study was aimed at identifying non-point source et al., 2000). Historical records from the Department of
pollution inputs in a watershed, with an emphasis on Conservation and Recreation (DCR) showed periodic elevated
microbial sources that may constitute a public health risk. fecal coliform measurements in the tributaries of these sub-
Sampling locations within a watershed were determined to basins. Numerous land use types could have contributed to
isolate surrounding land uses. For example, sample sites were the elevated bacterial levels and thus a sampling plan was
located both upstream and downstream of a horse pasture to initiated to identify microbial inputs to the subwatersheds.
ascertain the pasture’s influence on water quality. Grab Six sample sites were selected in the Malagasco Brook
samples were collected from a total of nine sampling sites, subwatershed as described in Table 2. Land uses that were
discussed further below, and analyzed for physical, chemical, isolated included the swampy headwaters, a plant nursery,
and microbial water quality as well as MST targets. The and a condominium complex. In the Beaman Pond Brook sub-
impacts of season and precipitation were determined by basin, the sampling locations were designed to isolate
developing a year-round sampling program that included impacts from domestic farm animals and from septic
both wet and dry weather flows. The data were analyzed to systems (see Table 2). In addition to the GIS data on land
determine relationships amongst water quality measures, uses within each subwatershed, characteristics of each
seasonal and precipitation influences, and the utility of MST sampling site were determined through a field reconnais-
targets to identify pollution sources. sance and personal interviews with the DCR wildlife biologist
to determine the presence/absence of wildlife activities.
2.1. Watershed sites Because of the compact nature of the landscape in New
England, it is possible that sampling sites may be influenced
Field and laboratory data were gathered from two sub-basins by multiple upstream land uses in these subwatersheds.
(Malagasco Brook and Beaman Pond Brook) in the Wachusett However, the sites selected for this study provide a realistic
Reservoir watershed located in central Massachusetts, USA, dataset, and thus are appropriate for thorough analysis of the
which serves as part of the water supply for Boston and the utility of an MST toolbox for identifying microbial inputs.

Table 1 – Percent land use characteristics of subwatersheds

Land use Percent of land use

Malagasco Brook Beaman Pond Brook Wachusett watershed


subwatershed subwatershed

Forested and open land 74 55 70


Agriculture o1 5 6

Residential
Low density 16 4 7
Medium density 3 17 4
High density 6 10 1

Commercial and industrial 0 6 1


Open water and wetlands o1 3 9

Total area 227 ha (562 acres) 151 ha (373 acres) 30,307 ha (74,889 acres)
% Impervious 12.2 19.6 7.6
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WAT E R R E S E A R C H 4 1 (200 7) 371 6 – 372 8 3719

Table 2 – Sample sites included in field study

Site Site location Distance from Site description


ID prior site

Malagasco Brook sub-basin


MB6 Headwaters of Malagasco Brook Heavily wooded; swampy
MB5 Intersection of Malagasco Brook and School 0.23 km (0.14 miles) Downstream of nursery; three single family homes
Street adjacent to site
MB4 Edgebrook Drive within condominium complex 0.50 km (0.31 miles) Dense residential development
MB3 Edgebrook Drive within condominium complex 0.48 km (0.30 miles) Dense residential development
MB2 East Temple Street, downstream of 0.35 km (0.22 miles) Moderate residential development
condominium complex
MB1 Confluence with Wachusett Reservoir on East 0.42 km (0.26 miles) Protected access; heavily wooded
Temple Street

Beaman Pond sub-basin


BP3 Route 110 on DCR property; upstream of private Swampy; low flow
horse farm
BP2 Route 110, downstream of private horse farm 0.10 km (0.06 miles) Overgrown; refuse leaves and manure near
embankment
BP1 Route 110, downstream of residence 0.42 km (0.26 miles) Residential property with cesspool; lightly wooded

2.2. Water sampling and testing program through a glass fiber filter in a UV–Visible Spectrophotometer
Cary 50 (Varian, Mulgrave, Victoria, Australia). Particle counts
Samples were collected from Malagasco Brook and Beaman in the 2–400-mm range were determined using a light blockage
Pond Brook subwatersheds from October 2003 to October particle counter (PC 2400 PS, Chemtrac Systems Inc., Nor-
2004, with a total of 11 sampling events over 13 months. All cross, GA). Total and dissolved organic carbon (TOC and DOC)
sites were sampled at least once during every season and at samples were preserved with acid on the day of collection,
least once during wet weather conditions (at least 1.3 mm stored at 4 1C, and analyzed within 2 weeks on a Shimadzu
(0.05 inches) of rain in the 48 h preceding sampling). In these TOC 5000-A analyzer (Shimadzu Corporation, Kyoto, Japan)
watersheds, this is the minimum amount of rain needed calibrated with potassium hydrogen phthalate standards.
before runoff might occur, depending on antecedent condi- Fecal coliforms and enterococci were enumerated using
tions (Rees, 2004). The samples were collected aseptically, membrane filtration techniques, Standard Methods 9222D
starting from the most downstream location, in sterilized and 9230C, respectively (APHA, AWWA and WEF, 1998). The
high-density polypropylene, wide-mouth, screw-capped bot- fecal coliform method used m-FC agar (Difco, Detroit, MI)
tles (Nalge Nunc International, Rochester, NY). The bottles plates with rosalic acid addition and incubation at 44.5 1C for
were immersed in the tributary and filled to capacity while 2472 h in a Neslab Exacal waterbath (Neslab Instruments,
standing and holding the bottle on the downstream side. Care Inc., Newington, NH). Enterococci enumeration used ME agar
was taken to avoid disturbing the sediments as much as incubated for 48 h at 4170.5 1C, followed by transfer to Esculin
possible. Samples were collected, transported, and handled in Iron agar plates. The Esculin Iron agar plates were retained at
accordance with US EPA quality assurance and quality control room temperature for 20–30 min, incubated at 4170.5 1C for
(QA/QC) standards (US Environmental Protection Agency (US 20 min, and then enumerated by counting pinkish red
EPA), 2001a). colonies that had developed a black precipitate on the
At each sampling site, water temperature, specific con- underside of the filter. For both microbial indicators, samples
ductance, and DO were measured in the field using YSI field were processed in triplicate, and QA/QC was maintained
meters (YSI, Yellow Springs, OH) in accordance with Standard through use of appropriate positive and negative controls.
Methods (APHA, AWWA and WEF, 1998). Samples were then Three MST targets were also enumerated for each sample:
transported to the laboratory for additional analysis. Labora- R. coprophilus above 50 cfu/100 mL, sorbitol-fermenting Bifido-
tory analyses included measurements of physical and che- bacteria, and F-specific RNA coliphage serotypes. Among these
mical water quality, indicator organism concentrations, and MST targets, a standardized method has only been estab-
MST targets. All physical and chemical water quality para- lished for enumeration and isolation of F-specific coliphages.
meters were measured in duplicate and average results are Coliphages were enumerated using EPA Method 1602, the
reported. pH was determined with a Fisher Scientific AB15 pH single agar layer method (US EPA, 2001b). Single plaque-
Meter (Fisher Scientific, Pittsburgh, PA) calibrated with three forming units were isolated and serotyped using an antisera
standard buffer solutions on the day of use. Turbidity was neutralization assay (Watanabe et al., 1967; Hsu et al., 1995;
measured using a Hach Model 2100N Ratio Turbidimeter Long et al., 2005a). R. coprophilus was quantified via membrane
(Hach Company, Loveland, CO) calibrated to sealed standards concentration, resuspension, and spread-plating as detailed
the day of use. UV254 absorbance, a surrogate measure of in Arango (2000) and Long et al. (2002). Sorbitol-fermenting
dissolved organic matter, was analyzed on samples filtered Bifidobacteria were enumerated using membrane filtration and
ARTICLE IN PRESS
3720 WAT E R R E S E A R C H 41 (2007) 3716– 3728

anaerobic incubation on human bifid sorbitol agar at 35–37 1C ranged from 387 to 805 mS, with means for the sample sites
for 4872 h, followed by biochemical confirmation (Arango, ranging from 572 to 658 mS. In general, specific conductance
2000; Long et al., 2002, 2005a, b). values averaged less than 200 mS in Malagasco Brook (with the
exception of MB1, the most downstream site), while the
2.3. Statistical analysis Beaman Pond Brook samples averaged greater than 500 mS. In
both subwatersheds, specific conductance increased with
Statistical analyses were conducted to determine the value of downstream distance. For example, the average specific
each parameter in relating to microbial water quality. So as conductance increased from 42 at MB6 (swampy headwaters)
not to assume normality of any of the parameters, correlation to 311 mS at MB1 (confluence with the reservoir). While there
analyses were performed using the non-parametric Spear- is no US water quality standard for specific conductance, it is
man’s rank correlation. The observations for each water used as a general indicator of dissolved solids. Thus,
quality parameter were ranked and correlation analysis was increasing concentrations downstream were anticipated.
performed using Analysis Tools with Microsoft Excel Profes- Also, higher levels in the Beaman Pond Brook subwatershed
sional Edition 2003. The individual water quality parameters are consistent with the presence of agricultural lands and
were compared to microbial measures to identify relation- the greater percentage of impervious surfaces in this
ships. Analysis was conducted for each subwatershed dataset subwatershed.
separately, and for the entire dataset to determine if relation- Three measures of organic matter were included in this
ships were watershed-specific. Critical values of r were study: TOC, DOC, and UV254 absorbance. In natural waters,
determined for the appropriate degrees of freedom for each excess organic matter can impart an oxygen demand that
dataset comparison. The r values larger than the critical lowers DO concentrations and affects fish and other aquatic
value of r at the 95% confidence level were considered species. In drinking waters, organic matter serves as a
significant. These analyses were also used to determine precursor for disinfection byproducts and may enhance the
which water quality measures were of most value in a survival of microorganisms (Scherer et al., 1992; Ferguson
watershed monitoring program focused on minimizing et al., 1996). Readily degradable organic matter can also lead
microbial risk and which could be eliminated to minimize to indicator regrowth (LeChevallier, 1990; Bouteleux et al.,
labor and costs. 2005). In Malagasco Brook, TOC and DOC levels were highly
Two-way analysis of variance (ANOVA) was used to variable depending on site and season. A pattern of decreas-
determine differences between seasons and precipitation ing TOC and DOC from MB5 (nursery) to MB1 (confluence with
conditions for each watershed and the entire dataset. In this the reservoir) was apparent. The highest TOC recorded was
way, the significance of season, occurrence of precipitation, 51.9 mg/L at MB5 in October 2003, compared to a low of
and the interactions between season and precipitation on 1.41 mg/L at MB1 in August 2004. In general, concentrations
sampling design could be assessed. First, monitoring data were approximately twice as high at MB6 (swampy head-
were reviewed for normality. Fecal coliform and enterococci waters) and MB5 (nursery) in comparison to MB1. High con-
data were log transformed to achieve normality. Owing to the centrations at the upstream sites in the fall can be attributed
very few samples in which R. coprophilus, sorbitol-fermenting to deciduous leaf litter and vegetation from the woodlands,
Bifidobacteria, and coliphages were detected, these parameters while site MB5 was elevated (greater than 20 mg/L) year-round
were excluded from ANOVA. Seasons were defined by the due to the influence of the plant nursery that stockpiled
solar calendar where spring begins at the end of March, compost and mulch products in uncovered piles. Lower
summer begins at the end of June, fall begins at the end of downstream concentrations indicate degradation without
September, and winter begins at the end of December. significant forest influence to further increase concentra-
Precipitation data at the Worcester Regional Airport in tions. In Beaman Pond Brook, organic carbon concentrations
Worcester, MA, for the day of and the days preceding remained below 7 mg/L year-round. The highest level was
sampling were obtained from the National Climatic Data 6.11 mg/L TOC at site BP3 (upstream of horse farm) in
Center. Rain measuring greater than 1.3 mm or 0.05 inches November, and the lowest level was 0.94 mg/L at BP1 (down-
was recorded for four of the 11 sampling dates. Statistical stream of residence) in January. In general, TOC tended to be
analyses were performed using the Mixed Procedure in SAS highest at BP3, while DOC was highest at BP1.
version 9.0 (SAS Institute, Cary, NC). For this analysis, Turbidity is an aggregate measure of particulate matter in
p-values less than 0.05 were considered statistically significant. water while particle counts provide exact numbers of
particles per milliliter in specific size ranges. In the Malagasco
Brook subwatershed, there was no apparent trend of parti-
3. Results and discussion culate matter with regard to site. All turbidities were below
5 ntu with three exceptions: MB5 (nursery), MB3 (town-
3.1. Land use and water quality relationships houses), and MB2 (downstream of townhouses) in August
2004. Particle counts were consistent with turbidity readings.
A summary of physical and chemical water quality including In the Beaman Pond Brook subwatershed, there was a clear
means and ranges for each sampling site is provided in pattern of elevated particulate readings at BP3 (upstream of
Table 3. In the Malagasco Brook subwatershed, specific horse farm) in comparison to the downstream sites. The
conductance ranged from 30 to 554 mS with means for the average turbidity level at BP3 was 8.22 ntu, compared to 2.37
sample sites ranging from 42 to 311 mS. In comparison, the and 1.06 ntu at BP2 and BP1, respectively. Site BP3 had a
values in the Beaman Pond Brook subwatershed samples shallow flow that was difficult to sample from without
Table 3 – Physical and chemical water quality

Site Temperature (1C) Dissolved oxygen (mg/L) Specific conductance (mS) pH

Mean Low High Mean Low High Mean Low High Mean Low High

Malagasco Brook subwatershed


MB6 9.4 1.4 11.2 2.89 2.30 4.08 42.0 30.0 58.0 5.9 5.6 6.1
MB5 9.9 0.2 18.6 5.03 2.90 8.20 88.3 56.0 110 6.0 5.3 6.4
MB4 7.8 0.0 18.1 10.5 7.64 12.8 170 71.0 341 6.7 6.1 7.3
MB3 7.6 0.1 18.2 10.2 7.23 12.6 152 79.0 217 6.7 6.2 7.0

WAT E R R E S E A R C H
MB2 7.6 0.1 18.9 11.3 7.82 14.2 150 79.0 215 6.9 6.5 7.3

ARTICLE IN PRESS
MB1 6.9 0.8 13.9 11.8 9.20 15.2 311 172 554 6.9 6.6 7.0

Beaman Pond Brook subwatershed


BP3 7.2 1.0 10.5 9.16 6.83 13.7 572 387 678 6.7 6.3 7.0
BP2 9.4 4.0 14.7 10.5 8.37 15.3 614 461 762 7.0 6.3 7.5

4 1 (200 7) 371 6 – 372 8


BP1 8.3 2.0 15.6 9.58 7.81 14.3 658 446 805 7.1 6.3 7.8

Site Total organic carbon (mg/L) Dissolved organic carbon (mg/L) UV254 (cm1) Turbidity (ntu) Particle counts (#/mL)

Mean Low High Mean Low High Mean Low High Mean Low High Mean Low High

Malagasco Brook subwatershed


MB6 35.4 19.4 50.8 33.7 18.4 46.9 1.6 0.80 2.3 1.96 1.00 3.67 4190 3010 5630
MB5 38.9 23.1 51.9 37.5 20.9 50.1 2.1 1.1 2.8 2.78 0.83 5.10 5050 2230 10,920
MB4 25.0 9.26 44.8 24.4 8.89 44.1 1.3 0.43 2.4 1.98 1.14 2.59 4140 2370 6050
MB3 22.7 8.00 42.1 21.8 6.16 41.3 1.1 0.30 2.2 3.21 1.01 8.27 5580 2520 11,620
MB2 21.8 9.67 39.5 21.4 8.31 39.5 1.1 0.41 2.1 2.63 1.23 5.99 4440 1750 9740
MB1 14.4 1.41 26.4 14.3 1.49 25.7 0.73 0.046 1.3 1.18 0.26 1.96 2610 1320 4450

Beaman Pond Brook subwatershed


BP3 3.21 2.11 6.11 1.13 0.81 1.36 0.029 0.017 0.051 8.22 4.60 17.8 5600 3920 6880
BP2 1.98 1.00 3.61 1.60 0.89 2.24 0.046 0.023 0.083 2.37 0.93 6.84 3800 2460 4760
BP1 1.94 0.94 2.83 1.90 0.98 2.89 0.044 0.021 0.080 1.06 0.52 2.83 2580 1370 3770

3721
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3722 WAT E R R E S E A R C H 41 (2007) 3716– 3728

disturbing the underlying sediments. Thus, the high particu- animal activity. R. coprophilus may be found in low numbers in
late numbers are a result of the site characteristics rather soils or on vegetation; therefore, a threshold level of 50 cfu/mL
than reflecting true sediment loadings from runoff. has been suggested to be indicative of animal fecal pollution
Traditional microbial indicators included fecal coliforms (Long et al., 2002). In the Malagasco Brook subwatershed,
and enterococci. These indicators can potentially identify R. coprophilus was detected at sites MB5 (nursery), MB4
areas of concern within a watershed with regard to fecal (townhouse development), and MB3 (townhouse develop-
inputs. Table 4 summarizes fecal coliform and enterococci ment). Overall, there were four detections among 28 possible
densities for the nine sampling sites. In the Malagasco samples, however never above the threshold limit of 50 cfu/mL.
Brook subwatershed, fecal coliform densities ranged Thus, grazing animal influences are not significant in this
from 2 to 2459 cfu/100 mL. Enterococci ranged from 1 to subwatershed and the low densities are likely due to runoff
3233 cfu/100 mL. Average enterococci densities were highest from vegetated areas. In the Beaman Pond Brook subwatershed,
at the sites within (MB4 and MB3) and just downstream of R. coprophilus was detected at every site at least once, with the
(MB2) dense residential development. This is consistent with highest densities at BP2 (horse farm) in five of six sampling
the fact that enterococci are more numerous in human- events. Densities were above the threshold for five out of 16
related fecal sources than in animal fecal sources (Wheeler samples: three times at BP2 (horse farm) and twice at BP1
et al., 2002). (residential development). In all but one sampling event,
The highest indicator densities all occurred during spring densities were higher at BP2 than BP1, indicating the major
and summer, and the lowest densities during the fall and contributing source of pollution at BP2 (horse farm), with some
winter. While these data appear to implicate the townhouse survival downstream of this source.
development as a major contributor to fecal pollution, the In the Malagasco Brook subwatershed, sorbitol-fermenting
individual data points cannot conclusively support this Bifidobacteria were found at site MB4 (townhouse develop-
assessment. Considering the six sampling events in Mala- ment), and in decreasing densities at each site downstream
gasco Brook, the highest density of fecal coliforms was found from MB4 with densities of 46, 16, 11, and 4 cfu/100 mL,
at MB6, MB4, MB3, and MB2 on different sampling dates. In respectively. The values shown in Table 4 were all from the
the Beaman Pond Brook subwatershed, while the average October 2003 sampling event: sorbitol-fermenting Bifidobacter-
densities of fecal coliforms and enterococci were highest at ia were detected at only one other time (4 cfu/100 mL at
BP2 (downstream of the horse farm), there was no consistent site MB4 in August 2004). These data indicate a human fecal
pattern in densities. The highest densities of indicator source upstream of MB4, with decreasing densities
organisms were found at each of the three different sites downstream indicative of transport and partial survival in
during different sampling events. Although the indicator agreement with Arango (2000) and Long et al. (2002). As
organism data provide preliminary evidence of fecal inputs, sorbitol-fermenting Bifidobacteria were never detected upstream
more specific information was needed to identify predomi- of the townhouses, this is clear evidence of human inputs from
nant microbial sources. the development. The development was constructed in the
Table 4 also contains the MST data for the Malagasco Brook early 1970s, with 24 buildings and 17 septic systems (including
and Beaman Pond Brook subwatersheds. Average values are leach pits, leach fields, and distributed leach fields). It is also
not provided as numerous samples were below detection significant to note that sorbitol-fermenting Bifidobacteria were
limits. R. coprophilus is an MST target indicative of grazing not detected in the winter sampling events in Malagasco Brook,

Table 4 – Microbial water quality

Site Fecal coliforms (cfu/ Enterococci (cfu/ R. coprophilus Sorbitol-fermenting Coliphages


100 mL) 100 mL) (cfu/100 mL) Bifidobacteria (cfu/ (pfu/100 mL)
100 mL)

Mean Low High Mean Low High Low High Low High Low High

Malagasco Brook subwatershed


MB6 252 2 734 16 1 31 BDLa BDL BDL BDL BDL BDL
MB5 199 3 568 232 1 1061 BDL 13 BDL BDL BDL 0.5
MB4 400 26 1664 611 12 2758 BDL 13 BDL 46 BDL 0.5
MB3 427 4 1832 698 13 3233 BDL 13 BDL 16 BDL 8.5
MB2 542 4 2459 292 10 1240 BDL BDL BDL 11 BDL 1.5
MB1 71 2 175 38 7 85 BDL BDL BDL 4 BDL 1.0

Beaman Pond Brook subwatershed


BP3 70 42 115 305 33 1000 BDL 13 BDL 8 BDL BDL
BP2 269 13 1364 323 38 1636 BDL 320 BDL 6 BDL 1
BP1 84 6 283 46 25 103 BDL 53 BDL 5 BDL BDL

a
Below detection limits.
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when DO levels were high (8.2–15.2 mg/L). As a strict anaerobe close to 100% positive for male-specific coliphages (Long et al.,
that is inactivated in the presence of DO, this MST target may 2005a; Blanch et al., 2006). Varying prevalence limits the use of
have limited applicability in cold climates when DO saturation male-specific coliphages to an MST target, as opposed to a
values approach 15 mg/L in 0 1C freshwater (US Geological general fecal indicator, and also supports its use as one of a
Survey, 2007). number of measurements in a toolbox approach.
In Beaman Pond Brook, sorbitol-fermenting Bifidobacteria Typing results demonstrated a predominance of F+DNA
were detected upstream of the horse stable (BP3) in the winter phages (93%) compared to F+RNA phages (7%). Research has
of 2004 at 8 cfu/100 mL. In combination with the enterococci shown that F+DNA coliphages tend to dominate F+RNA
data with densities up to 1000 cfu/100 mL at this site, an phages in waters with contamination of human origin (Long
upstream residential area may be contributing to fecal et al., 2005a). This was true of samples in and downstream of
contamination. In the summer, sorbitol-fermenting Bifidobac- the townhouse development in Malagasco Brook. In the
teria were found downstream of the horse stable (BP2). Beaman Pond Brook subwatershed, there was only one
Unfortunately, the upstream (BP3) location could not be positive sample, at HF2 (horse farm). In both subwatersheds,
sampled during this event due to lack of flow; therefore, no serotyping of the F+RNA coliphages isolates was inconclusive.
conclusion can be drawn regarding the exact source. In the The value in F-specific coliphage typing is that the associa-
spring, sorbitol-fermenting Bifidobacteria were detected at tions of the different groups with human (groups II and III)
5 cfu/100 mL downstream of the residential area (BP1) and and non-human (groups I and IV) fecal contamination have
not at any other site, indicating an input from septic systems. been demonstrated to apply globally and have remained
Considering both subwatersheds, R. coprophilus was de- stable for over three decades as reported by Japanese
tected in 15 of 44 samples (34%) and sorbitol-fermenting researchers and others (Watanabe et al., 1967; Osawa et al.,
Bifidobacteria were detected in eight of 44 samples (18%). 1981; Furuse, 1987; Long et al., 2005a; Blanch et al., 2006).
Therefore, these MST targets have limited utility for routine However, in watersheds where microbial sources are diffuse,
monitoring and derive their value as MST indicators only. As and therefore detection and densities may be low, coliphage
with many of the MST methods, a positive result can provide typing should be part of an MST toolbox.
definitive proof of the presence of a specific source; however, Overall, each group of water quality measures alone
a negative result may be inconclusive because of the nature of (physical, chemical, microbial, and MST) was not adequate
the survival and presence of inhibitors in environmental to characterize the non-point impacts within the watersheds
samples. The methods used in this study were based on studied. A total of 14 water quality measures were collected
culturing R. coprophilus or sorbitol-fermenting Bifidobacteria. over all four seasons under both baseflow and stormflow
Culture-based methods have some value in measuring viable conditions in combination with land use data. Studies of this
indicators and potential for infectious pathogen risk over magnitude can cost local governments or utilities tens of
quantification of nucleic acid targets alone. It has been thousands of dollars. Statistical analyses were conducted to
demonstrated that MST targets (i.e. Bacteroides spp.) quanti- determine which water quality measures provide the most
fied using real-time, quantitative PCR have been detected useful information and which ones could be eliminated from
throughout an industrial process train even after peroxide a watershed management sampling scheme to save costs.
oxidation treatment, whereas culturable sorbitol-fermenting
Bifidobacteria were only detected before oxidation (Olstadt, 3.2. Correlation analysis
2006). Thus, this study demonstrates the strength of a toolbox
or weight-of-evidence approach when applying MST so that As described above, non-parametric correlation analysis was
multiple measures may be used to provide evidence of conducted to determine whether significant relationships
microbial contaminant sources. This approach is also pro- exist among microbial measures and water quality. In
moted by the MST scientific community (Rochelle and addition, analyses by the subwatershed dataset were con-
DeLeon, 2006). ducted to determine whether relationships among para-
F-specific coliphages were detected in the Malagasco Brook meters are watershed specific. Table 5 summarizes the
subwatershed in seven out of 28 samples, at every site except correlations between water quality parameters that are
MB6. Densities were below 10 pfu/100 mL in all cases. The statistically significant at the 95% confidence level for
high percentage of negative samples and the low levels of Malagasco Brook, Beaman Pond Brook, and the complete
coliphages in these subwatersheds reflect the relatively small dataset. Significance was determined by calculating critical
animal and human populations within these areas. Unlike Spearman’s r values. If the calculated r value was greater
fecal coliforms which are universally shed in the feces of than the critical value, the correlation was judged to be
warm-blooded animals, male-specific coliphages have only significant. Few relationships among parameters were noted
been demonstrated to be shed by a small percentage of the for the Beaman Pond Brook dataset. This reflects the smaller
human and animal population. In one study out of Hong Kong number of data observations and lower statistical power.
that analyzed 13 cow, 21 pig, and 22 human fecal samples, no When considering the microbial parameters, the more
male-specific coliphages were detected (Dhillon et al., 1976). traditional microbial indicators (fecal coliforms, enterococci,
In another study conducted in the United States, less than 2% and coliphages) were related when all data were considered
of human fecal samples tested were positive for male-specific and when only the Malagasco Brook data were considered.
coliphages while up to 60% of cow feces contained male- Previous studies have reported moderate to strong correla-
specific coliphages (Long et al., 2005a). In contrast, composite tions between coliphage and fecal coliform densities in
samples (wastewater and animal waste slurries) are typically sewage and treated waters (r ¼ 0.69; Wentsel et al., 1982)
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3724 WAT E R R E S E A R C H 41 (2007) 3716– 3728

Table 5 – Statistically significant Spearman correlations* between microbial indicators and other water quality parameters

Watershed Malagasco Brook Beaman Pond Brook Entire dataset


Critical r (95% level) 0.37 0.50 0.30

Parameter Parameter r- Parameter r- Parameter r-


Value Value Value

Fecal coliforms Temperature 0.84 Temperature 0.74 Temperature 0.83


pH 0.42 DO 0.62 Turbidity 0.42
TOC 0.44 TOC 0.55 Particle counts 0.42
DOC 0.45 Enterococci 0.77
UV254 0.44 Coliphages 0.51
Turbidity 0.58
Particle counts 0.53
Enterococci 0.80
R. coprophilus 0.44
Coliphages 0.44

Enterococci Temperature 0.77 No significant correlations Temperature 0.66


pH 0.61 pH 0.41
TOC 0.44 TOC 0.31
DOC 0.45 DOC 0.34
UV254 0.44 UV254 0.31
Turbidity 0.40 Turbidity 0.31
Fecal coliforms 0.80 Fecal coliforms 0.77
R. coprophilus 0.44 Coliphages 0.48
Coliphages 0.59

R. coprophilus Temperature 0.47 No significant correlations Specific conductance 0.50


Turbidity 0.42 TOC 0.54
Particle counts 0.42 DOC 0.46
Fecal coliform 0.44 UV254 0.46
Enterococci 0.44

Sorbitol-fermenting pH 0.51 No significant correlations pH 0.42


Bifidobacteria

Coliphages Temperature 0.54 No significant correlations Temperature 0.45


Specific cond. 0.39 Particle counts 0.37
Turbidity 0.45 Fecal coliforms 0.51
TOC 0.50 Enterococci 0.48
DOC 0.48
UV254 0.48
Particle counts 0.44
Fecal coliforms 0.58
Enterococci 0.59
R. coprophilus 0.41

Water quality Temp. and DO 0.58 Temp. and DO 0.72 Temp. and DO 0.58
TOC, DOC, UV 40.99 Temp. and DOC 0.51 TOC, DOC, UV 40.95
Turbidity and particle 0.88 DO and TOC 0.68 Turbidity and particle 0.83
counts counts
pH and carbon 40.45 TOC, DOC, UV 40.53 pH and carbon 40.48
pH and specific 0.80 Turbidity and particle 0.80 pH and specific 0.58
conductance counts conductance

Malagasco Brook (28 data points per parameter), Beaman Pond Brook (16 data points per parameter), and the entire dataset (44 data points per
parameter).

and surface waters (r ¼ 0.387; Castillo et al., 1988), and turbidity and UV254 absorption could be used to trigger
consistently high levels of coliphages in domestic wastewater intensive microbial analyses. The lack of relationships
(Calci et al., 1998). Traditional microbial indicators were also between sorbitol-fermenting Bifidobacteria and traditional
related to particulate matter and inversely related to organic microbial indicators, and between R. coprophilus and tradi-
matter. Therefore, once experience with monitoring within a tional microbial indicators (except in Malagasco Brook)
watershed has been established, rapid measures such as supports the conclusion that these two MST targets are not
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Table 6 – Two-way ANOVA results (p-values) for water quality differences by site, season, and precipitation

Difference Season Precipitation Season by precipitation


by interaction

Dataset Malagasco Beaman All Malagasco Beaman All Malagasco Beaman All
Brook Pond data Brook Pond data Brook Pond data
Brook Brook Brook
Parameter

Temperature 0.002 0.610 0.031 o0.001 0.033 0.001 * 0.307 0.899


Dissolved 0.128 0.153 0.067 0.012 0.038 o0.001 * 0.399 0.986
oxygen
Specific 0.546 0.270 0.346 0.007 0.008 o0.001 * 0.352 0.584
conductance
pH 0.414 0.045 0.056 0.001 0.012 0.640 * 0.086 0.398
TOC o0.001 0.204 0.005 0.001 0.581 0.901 * 0.556 0.242
DOC o0.001 0.085 0.006 0.002 0.388 0.726 * 0.779 0.260
UV254 o0.001 0.077 0.008 0.002 0.109 0.719 * 0.086 0.247
Turbidity 0.592 0.358 0.457 0.067 0.662 0.234 * 0.701 0.799
Particle 0.056 0.973 0.084 0.102 0.582 0.059 * 0.902 0.990
counts
Log (fecal 0.004 0.520 0.036 0.026 0.410 0.014 * 0.670 0.070
coliforms)
Log 0.116 0.722 0.059 0.588 0.735 0.594 * 0.586 0.618
(enterococci)
R. * * * * * * * * *
cophrophilus
Sorbitol- * * * * * * * * *
fermenting
Bifidobacteria
Coliphages * * * * * * * * *

*Could not be calculated because of lack of adequate data pairs for each variable case.

suitable for routine microbial monitoring. While fecal coli- determine the significance of season and precipitation. The
forms and enterococci can be anticipated to occur in analysis was completed for every water quality parameter
relatively high concentrations due to any type of fecal that was measured. The data were analyzed separately for
contamination, sorbitol-fermenting Bifidobacteria would only each subwatershed and for the combined dataset. p-Values
be present if the fecal matter is of human origin and absent for the ANOVA results are summarized in Table 6, with
for fecal matter arising from grazing animals. A non-detect on statistically significant differences at the 95% confidence level
the MST target would provide limited information on indicated in italics. Once again, the statistical power within
potential public health risk. Thus, both a traditional indicator the Beaman Pond Brook dataset was relatively low; therefore,
and an MST target are needed to fully assess the pollution few statistically significant relationships were observed. The
level and source. numbers of replicate analyses for each sampling site within
When considering an overall monitoring plan, a number of each watershed were relatively small (6 and 5, respectively)
correlations were significant for the Malagasco Brook subwa- and thus conferred low statistical power. Sample sites were
tershed and combined dataset. Microbial indicator densities selected to hydrologically isolate specific land uses. Thus,
(fecal coliforms, enterococci, and coliphages) were all related, water quality at each sampling site was assumed a priori to be
while the measures of organic matter (UV254 absorbance, TOC, different. Owing to these factors, further statistical analyses
and DOC) were highly related, and measures of particulates for differences in water quality by site were not conducted.
(turbidity and particle counts) were also highly related. These For seasonal analysis, five, one, and five water quality
correlations between water quality measures are not likely parameters were statistically different by season for Mala-
watershed specific. Therefore, to optimize information and to gasco Brook, Beaman Pond Brook, and the combined dataset,
minimize labor and expenditure of resources, a water manage- respectively. Temperature was demonstrated to be affected by
ment agency might choose to measure only fecal coliforms, season, which is as expected, and therefore is a benchmark as
UV254 absorbance, and turbidity. to whether analyses were conducted properly. All three
measures of organic carbon were statistically affected by
3.3. Analysis of variance season. These parameters are affected by snow cover and
deciduous tree life cycles. Once again, these parameters
A two-way repeated-measures ANOVA, which accounted for indicate that analyses were conducted properly. Considering
correlation over time within the same site, was used to the indicator organisms, fecal coliforms were different by
ARTICLE IN PRESS
3726 WAT E R R E S E A R C H 41 (2007) 3716– 3728

season for the Malagasco Brook dataset and the combined utilities would only need to include one of each of these
dataset. In the climate of New England, seasonal variations in measures in their monitoring plan to keep budgets as
these microorganisms would be expected. In particular, low as possible without compromising the value of infor-
increased fecal indicator densities in summer months are mation gained. However, in order to fully understand
impacted by both increased inputs to surface waters and variability in microbial loadings within a watershed, monitor-
increased survival times. These factors are influenced by ing programs should include schemes to collect and analyze
temperature, incident solar radiation, livestock management samples each season and under different precipitation
practices, manure handling practices, and/or land store conditions.
recovery (Howell et al., 1995; Hunter et al., 1999; Edwards et al., The three culture-based, library-independent MST targets
2000). This supports the need to conduct monitoring in each of (R. coprophilus, sorbitol-fermenting Bifidobacteria, and coli-
the four seasons for watershed management purposes. phages) were selected for inclusion in this study based on
ANOVA was also conducted to determine differences in the non-point sources indicated by land use analyses
water quality parameters during dry versus wet weather (residential development served by aging septic systems, a
flows. For this analysis, a rain event was defined as 1.3 mm plant nursery, and a horse pasture). Collection and analysis of
(0.05 inches) or more of precipitation in the 48 h preceding MST targets from samples over a number of hydrologic and
sampling based on the advice of a hydrologist (Rees, 2004). seasonal conditions is suggested for source water protection.
Eight, four, and four water quality parameters were statisti- Diffuse and transient microbial sources in the study wa-
cally different by precipitation for Malagasco Brook, Beaman tershed often resulted in non-detects for the MST targets.
Pond Brook, and the combined dataset, respectively. Tem- Negative results for a single sampling time should be viewed
perature, DO, and specific conductance were significantly as inconclusive; however, repeated negative results over time
related to precipitation for all three datasets analyzed. pH was under different hydrologic conditions can provide proof that a
significant when each subwatershed was considered indivi- source is being adequately controlled. On the other hand, a
dually, but not in the combined dataset. This indicates that positive result provides proof of the contribution of a specific
constituents that affect pH behave in different manners source. Therefore, a toolbox approach incorporating a num-
within watersheds. Organic carbon varied significantly with ber of sampling campaigns is necessary since a single non-
precipitation in Malagasco Brook. This watershed is predo- detection of viable indicators may result in erroneous
minantly forested land (74%) as compared to Beaman Pond interpretations. The MST toolbox employed in this study
Brook (55%; Table 1). Therefore, greater amounts of organic was useful for microbial source identification, but could not
matter can be mobilized with runoff. Finally, fecal coliforms be used as the only tool in a watershed management
were statistically affected by precipitation when considering program. Therefore, this study supports the integration of
Malagasco Brook and the combined dataset. Increased land use analysis, traditional monitoring, and a suite of MST
streamflows in other studies have demonstrated increases targets to fully characterize non-point source and microbial
in bacterial content (Kay and McDonald, 1980; Ferguson et al., pollution in a drinking water subwatershed.
1996). These results indicate that in order to capture true
microbial indicator loading within a watershed, monitoring
should include capturing both baseflow and stormflow Acknowledgments
conditions.
Finally, the interaction between season and precipitation This work was funded in part by the Massachusetts Depart-
was evaluated using ANOVA analysis—however, this was only ment of Conservation and Recreation (DCR). The conclusions
done for observations taken in spring and fall, since there and recommendations are those of the authors and not
were no dates with precipitation in winter or summer. necessarily those of DCR. We would like to thank the students
Malagasco Brook was excluded as there were no dry observa- who assisted in sample collection and analysis: Malia Aull,
tions in spring. There was no interaction observed in any Tiffany Tauscher, and Craig Hebert. Special thanks to
model for any response. The implications for the design of Nicholas S. Keuler of the College of Agriculture and Life
watershed management programs are that monitoring Sciences Statistical Help Center, University of Wisconsin, for
schemes need to include collection of samples over all his statistical advice.
seasons and a variety of precipitation conditions.
R E F E R E N C E S

4. Conclusions
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