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  • AGI Code Description NCBI Pfam Family Gravy: P.glauca

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    Max Neol
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    The document describes 14 Arabidopsis thaliana proteins that are similar to late embryogenesis abundant (LEA) proteins from other plant species such as Glycine max and Picea glauca. It provides information on the AGI code, description, predicted protein family or domain, predicted subcellular localization, and grand average of hydropathicity (GRAVY) score for each protein. Many of the proteins are predicted to be secreted, localized to mitochondria or chloroplasts, or have unknown localization and contain LEA-related domains.

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    codigo genes

    Original Title

    1471-2164-9-118-S1

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    The document describes 14 Arabidopsis thaliana proteins that are similar to late embryogenesis abundant (LEA) proteins from other plant species such as Glycine max and Picea glauca. It provides information on the AGI code, description, predicted protein family or domain, predicted subcellular localization, and grand average of hydropathicity (GRAVY) score for each protein. Many of the proteins are predicted to be secreted, localized to mitochondria or chloroplasts, or have unknown localization and contain LEA-related domains.

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    © All Rights Reserved
    Download as XLS, PDF, TXT or read online from Scribd
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    14 views2 pages

    AGI Code Description NCBI Pfam Family Gravy: P.glauca

    Uploaded by

    Max Neol
    The document describes 14 Arabidopsis thaliana proteins that are similar to late embryogenesis abundant (LEA) proteins from other plant species such as Glycine max and Picea glauca. It provides information on the AGI code, description, predicted protein family or domain, predicted subcellular localization, and grand average of hydropathicity (GRAVY) score for each protein. Many of the proteins are predicted to be secreted, localized to mitochondria or chloroplasts, or have unknown localization and contain LEA-related domains.

    Copyright:

    © All Rights Reserved
    Download as XLS, PDF, TXT or read online from Scribd
    Flag for inappropriate content
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    of 2

    AGI code Description NCBI Pfam family GRAVY

    AWPM-19-like membrane family


    At1g04560 protein. similar to LEA from G. max AWPM-19 0.45

    similar to LEA protein EMB8 from


    P.glauca,
    esterase/lipase/thioesterase family
    At1g34340 protein - 0.413
    LEA related. similar to EMB7 from
    P.glauca, contains InterPro domain
    At1g54890 "Root cap" - -0.202
    F-box family protein. similar to LEA
    At1g61340 from P.glauca - -0.631

    unknown protein. contains similarity


    to LEA from P.glauca, Gcn5-
    At1g71730 interacting protein - -0.387
    similar to LEA from P. glauca,
    contains InterPro domains "Root
    cap", "Antihaemostatic protein",
    "Pistil-specific extensin-like protein",
    At3g19430 "Small proline-rich" - -0.379

    At3g50790 putative LEA protein abhydrolase_1 -0.111


    F-box family protein. similar to LEA
    At4g05010 from P.glauca F-Box -0.638
    embryo sac development arrest 21,
    Defensin-like family protein. similar to
    At4g13235 LEA from P.glauca - 0.406

    similar to LEA from P. glauca,contains


    At4g27400 InterPro domain "Root cap" - -0.182

    At5g54370 similar to LEA from P. glauca root cap -0.37

    At5g60520 similar to LEA from P. glauca root cap -0.367

    At5g60530 similar to LEA from P. glauca root cap -1.044


    predicted
    subcellular
    localization

    secreted

    other

    secreted

    Mitochondrion

    Mitochondrion

    secreted

    Chloroplast

    other

    secreted

    secreted

    secreted

    secreted

    secreted

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