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Biology Lecture
Biology Lecture
- why is this?!
2!
Why Most Cells Remain Small in Size
________________________.!
diffusion supply
diffusion !
supply!
_________________________________!
cell surface
Fig. 48.12
https://quizlet.com/19110502/parts-of-the-cell-flash-cards/
cytoplasmic streaming
6!
Microscopes ________ magnify objects but they also help us to __________!
resolve
_________________________.!
objects that are close together
Magnification: _____________
ratio between the size of an image produced by a !
microscope and its actual size.!
7!
Two Types Of Microscopes Available Based On !
Source Of Illumination !
Light microscopes!
- Use _________
light for illumination!
- Focus light using glass _________!
lenses
Electron microscopes!
- Use _________________
electron beam for illumination!
- Focus beams of electrons using __________!
magnets
F 7!
9!
Types Of Light Microscopes
A. Light Microscope (Bright Field)
Transmitted ___________
white light is used!
to illuminate samples. !
11
B. Differential Interference Contrast (DIC) And
Phase Contrast Microscopes
DIC
Phase
Phase contrast
Fig. 2.4 contrast
1) Fluorescent stains!
15
2) fluorescent proteins!
_____________________,
Green fluorescent proteins GFP traditionally!
refers to a protein first isolated from!
the jellyfish Aequorea victoria.
__________________________________
using biotechnology, the GFP gene has been inserted into the !
genome of organisms and maintained in their genome through!
breeding.!
16
Gene for synthesis of GFP is inserted into a gene that
produces a particular protein of interest.
ww.conncoll.edu/ccacad/zimmer/GFP-ww/prasher.html
18
D. Confocal Laser Scanning Microscopy!
19
____________
laser illuminate various points in the sample.!
Points are processed by a computer to give a very ______________.!
sharp 3-D image
21!
Types Of Electron Microscopes
Disadvantage of electron microscopes is you _________________!
can not study living cells or tissues
_____________________ with them.!
A. Transmission Electron Microscope (TEM)!
Most ________________
cells organelles are too small to be studied with a light!
microscopes.!
Organelles and other cell structures can be studied using electron!
microscopes.!
Use an ______________
electron beam instead of light and the beam is focused!
using ________________
magnets rather than glass lenses.!
A TEM, a ____________________________,
a transmission electron microscope is used to study _____!
thin
________________
sections of tissue.!
22
A beam of electrons is focused on a _______________________ in!
then section of specimen
a vacuum. Electrons that pass through the tissue form the image; !
structures that scatter electrons ____________.
appear dark Various ________!
fixing
and _______ methods
staining are used to highlight structures of interest. !
Beam of electrons passing through the tissue is focused onto a!
fluorescent screen.!
A part of the image on the screen can be photographed to produce!
an ______________________.!
electron micrograph
23!
Electron microscopes can achieve magnifications of up to ________.!
500,000x
24!
E. Scanning Electron Microscope (SEM)
To observe the ____________
3-D structure of very small specimens, a scanning !
electron microscope (SEM) is used.!
Object is coated with gold.!
A electron beam striking the gold surface causes the surface!
to ________________.!
emit electrons
25
Purification of cells and their parts may be performed using the!
following a method called ___________________________.!
subcellular fractionation
26
Subcellular
Fractionation
________________
rupture cells in some way in!
an isotonic solution creating!
a ____________
suspension of broken cells!
and subcellular components!
Use ________________________!
differential centrifugation
to obtain relatively pure samples!
of the _______________________.
desired components(s) !
- use of a sequential increase in !
__________________
gravitational force results in !
the sequential ______________
separation of !
__________________
organelles according to!
their density.!
27
Cell Organization
Features Shared By All Cells
All cells are surrounded by a ___________________
plasma membrane and some cells!
have _______________________,
coordinated chemical system as well.!
Fig. 2.9!
28
polar head
__________________
water pushes the hydrophobic regions!
of phospholipids away from itself resulting!
in one of the molecular formations illustrated !
on the previous slide. !
Fig. 5.4
30!
All cells store hereditary information in the same linear chemical!
code consisting of the _______________
nucleic acid DNA molecules located in one!
or more ____________________.!
chromosomes
Chemistry of _____________
every living cells is fundamentally similar, because!
it must provide for the synthesis of ________________________.!
DNA, RNA, and protein
Template DNA!
DNA replication!
New DNA!
31!
Templated polymerization is also used to transcribe portions of !
the information on DNA into _______________________.
molecules of RNA !
RNA
RNA in turn guides the synthesis __________of proteins by the more complex !
machinery of ________________,
translation involving large _____________!
multimolecular
_____________________________________.!
machine in the cytoplasm called ribosomes
Cytosol is an _____________
aqueous solution containing ions and various organic !
molecules. !
The cytoplasm also has a _________________________________.
cytoskeleton made of protein fibers !
- cytoskeleton maintains cell shape and plays key roles in cell!
division and chromosome segregation.!
33
Cell Types
Two cell types are recognized, the ___________________
prokaryotic cell typical of!
__________________________________.!
prokaryotes in Domain Bacteria and Archaea
Fig. 2.7
prokaryote 34
eukaryote
Internal Organization in Eukaryotic Cells!
In cells of eukaryotes, the region inside the plasma membrane is!
subdivided into the ________________________.!
nucleus and the cytoplasm
35
In multicellular eukaryotes shape, size, and organization vary!
considerably among different species and among different cell!
types of the same species.!
All the cells have the same _________
genome but because different genes !
are expressed in different cells they don’t have the same!
___________________.!
proteomes
36
A genome is an organism’s ___________________,
complete set of DNA including all of !
its genes.!
37
Internal Organelles!
I. Nucleus!
_____________,
Large organelle which you can study under the light microscope.!
Is involved in:!
- _________________
Cellular reproduction !(contains the genetic material DNA and!
replicates DNA).!
- _____________________!
controls activity of cell by (transcribes and splices RNA)!
controlling gene expression
- __________________________
controls selective exchange of molecules between the!
cytoplasm and the nucleoplasm. !
nucleus maintains the integrity of the DNA
38!
Fig. 2.10
Surrounded by a _______________
nuclear envelope consisting of _______________!
two membranes
__________________________________.!
separated by a fluid-filled perinuclear space
But these larger molecules can cross the nuclear envelope because!
the envelope is penetrated by many _______________________!
large nuclear pore complexes
___________________. !
40!
Fig. 2.10!
Over 500 molecules per second can pass through each nuclear pore. !
____________________________________
RNA molecules and ribosomal subunits are transported from the !
nucleus into the cytosol while _____________
proteins enter the nucleus through!
the pores.!
41!
Nucleoplasm includes the ______________
liquid medium inside the nucleus as well!
as a ______________________________________________.
network of fibers called the internal nuclear matrix !
The nucleus is filled with ___________________.!
chromatin
42!
One or more _____________
nucleoli may be present inside the nucleus.!
Fig. 2.10!
The _________
nucleolus is a region where ________________
ribosomal subunits are assembled !
from ribosomal RNA(s) and proteins.!
Ribosomal subunits exit the nucleus through the nuclear pores and!
enter the cytosol.!
43!
Some cells, as they mature lose their nucleus.!
44!
II. Endoplasmic Reticulum (ER) and Ribosomes
lumen
Fig. 2.12
46!
ER connects at certain points with the outer membrane of the!
_____________________.!
nuclear envelope
ER involved in ________________________________
formation of nuclear membrane during cell!
division and the ____________________
addition or subtraction of membrane from the !
nuclear envelope.!
So, lumen in the cisternae is continuous with the ______________
perinuclear !
_____________
space but separated from the cytosol.!
47!
Note the attachment !
of ER to outer membrane !
of nuclear envelope!
cisternae
lumen
Fig. 2.16
48!
Two kinds of ER:!
1) Rough ER – outer
! surface studded with ribosomes
49!
II. A. Ribosomes!
These tiny cytoplasmic structures which are really!
more like ____________________.!
enzymes than organelles
Fig. 13.10
ribosome!
Fig. 2.11!
50!
Some ribosomes are ____________________.!
free in the cytosol
ribosome!
such as:!
-!nucleus
-!mitochondria or plastids
51
Posttranslational Import!
Certain polypeptides produced in the cytosol can ______________!
enter organelles
after protein synthesis by _____________________
post-translational import.!
Involves a _______________
signal sequence on the polypeptide (called a ________!
transit
___________)
sequence which is recognized by a ______________
receptor protein on the!
membrane of the target organelle.!
posttranslational import of
a __________________________ into
a mitochondrion
http://www.unitus.it/scienze/corsonew/lezione11.html 52
https://www.youtube.com/watch?v=LfDYGanMi6Q
53!
Proteins synthesized on ________________________
ribosomes attached to the ER either:!
- 1) become inserted ____________!
into the ER membrane
___________________.!
- or 2) _________________________!
enter the ER for enzymatic modification and
___________________________.!
transport
ribosome!
Insertion of a protein
into the ER membrane
during translation
54!
https://www.youtube.com/watch?v=LfDYGanMi6Q
https://www.youtube.com/watch?v=4g
55!
Cotranslational Import Into The ER
Polypeptide chains synthesized on ribosomes attached to the !
ER may ______________________.!
enter the lumen of the ER
Fig.
13.19
. called coiltranslation import 56!
II. B. Function of Rough ER Fig. 2.16
Fig. 2.12
http://slideplayer.com/slide/2521323/
http://slideplayer.com/slide/2521323/ Slide 17
58!
Rough ER also has ______________
enzymes that can modify the transported proteins!
by _________________________________________
adding oligosaccharide carbohydrates to the proteins.!
- the covalent attachment of a carbohydrate to another molecule is!
called _______________:
glycosylation if to a lipid (_________________)
result is a glycolipid or to!
a protein (result is a _______________________).!
glycoprotein
https://www3.nd.edu/~aseriann/CHAP12B.html/sld081.htm 59!
glycoproteins!
protein!
When proteins enter
protein the ER most acquire
the 14 sugar residues
shown here _____________________
oligosaccharide
Some of these sugars carbohydrate!
may be removed and
carbo-
others added as proteins
hydrate pass through the Golgi
apparatus
60!
Some ribosomes attach to the outer surface of the ______________.!
nuclear envelope
Fig. 2.10!
61!
II. C. Smooth ER
Fig. 2.12
62!
Nervous stimulation of the muscle cell causes a _______________!
sudden release
_________________________________.!
of Ca++ into the cytoplasm
Figure 38.6
63!
Smooth ER is the site of _________________________________.!
lipid synthesis and lipid modification
64!
III. Golgi Apparatus
Golgi apparatus is a system of membrane-bound, fluid-filled sacs!
(cisternae) arranged _________________________.!
parallel to each other
Fig. 2.13!
Number can vary from one to hundreds in cells.!
The ________________
receiving (cis) side faces the _______________________!
ER and the shipping (trans)
side faces the __________________.!
plasma membrane
_________
clisternae
Vesicles budded
Internal from Golgi _________
containing
space ___________________
finished product
__________________________
sac to sac via tiny vesicles that bud off one sac and move to the!
next sac.!
Fig. 2.13
Fig. 2.16
68
____________________
Secretory vesicles that bud off the Golgi and go to the plasma!
membrane contain molecules destined to be ___________________.!
released from the cell
Once the vesicles reach the plasma membrane, they fuse with the!
membrane and release their contents to the outside via __________.!
exocytosis
Fig. 2.14
Endocytic vesicle
Instructions for
building proteins
5 Lysosomes leave the nucleus
Damaged and enter the
organelle cytoplasm.
Nucleus
Vesicles
Golgi 2
1 Rough ER
complex
Secretory
3 Ribosomes Proteins (green and
vesicles yellow) are
4 assembled from
amino acids by
ribosomes attached
to the ER or free
Fig. 2.16
70! in the cytosol.
Molecules for use within the cell are released from the Golgi and:!
- packaged into vesicles called ___________________.!
lysosomes
71
IV. Lysosomes
Small membrane-bound vesicles in animal cells containing _________!
hydrolytic
_________________________________
enzymes necessary to digest complex organic molecules.!
Found in animal but not plant cells.!
1) Involved in _______________________________.!
intracellular digestion in food vacuole
73
3) Lysosomes are also involved in the breakdown of ____________!
worn out or
_________________________________________.!
damaged organelles or other cellular material
The molecules that result from the hydrolytic reactions are ________!
reused
by the cell or they are _____________
excreted from the cell.! 74
http://dev.biologists.org/content/135/14/2347/F1.expansion.html
75
V. Vacuoles!
Fluid-filled spaces surrounded by a ______________________.!
vacuolar membrane
a) Contractile Vacuole!
In freshwater protozoans a ____________________
contractile vacuole is involved in!
removing _________________
excess water that diffuses into the cell.!
Fig. 22.4!
77
b) Food Vacuoles!
Some protozoans cells and some animal cells engulf larger food!
items into their cells ______________________________________.!
by a form of endocytosis called phagocytosis
Fig. 2.14!
78
They serve as a sites of ________________________.!
intracellular digestion
__________
Lysosomes fuse with the food vacuole and __________________!
introduce hydrolytic
________________________.!
enzymes into the vacuole
Resulting _______________________
smaller monomer molecules are then absorbed into !
the ____________.!
cytosol
79
c) Central (or Plant) Vacuole!
Many mature ____________
plant cells contain a _______________________.!
large central vacuole
central !
Outer membrane called! vacuole!
the ______________.!
tonoplast
___________________________________.!
into structural and functional compartments
82
Membrane ______________________________
flows between parts of this system and to and from the!
plasma membrane via _________________.!
tiny vesicles
83