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    Treutlein tSNE Type1 PDF

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    Bang Tran
    The document shows t-SNE plots that were used to identify different cell types in mouse lung tissue samples. The plots map single cells to two dimensions based on their gene expression profiles, allowing visualization of distinct clusters that likely correspond to different cell types like alveolar type 1 cells, alveolar type 2 cells, bronchial epithelial cells, ciliated cells, and Clara cells.

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    Treutlein tSNE Type1 PDF

    Uploaded by

    Bang Tran
    26 views1 page
    The document shows t-SNE plots that were used to identify different cell types in mouse lung tissue samples. The plots map single cells to two dimensions based on their gene expression profiles, allowing visualization of distinct clusters that likely correspond to different cell types like alveolar type 1 cells, alveolar type 2 cells, bronchial epithelial cells, ciliated cells, and Clara cells.

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    The document shows t-SNE plots that were used to identify different cell types in mouse lung tissue samples. The plots map single cells to two dimensions based on their gene expression profiles, allowing visualization of distinct clusters that likely correspond to different cell types like alveolar type 1 cells, alveolar type 2 cells, bronchial epithelial cells, ciliated cells, and Clara cells.

    Copyright:

    © All Rights Reserved
    Download as PDF, TXT or read online from Scribd
    Flag for inappropriate content
    Download as pdf or txt
    26 views1 page

    Treutlein tSNE Type1 PDF

    Uploaded by

    Bang Tran
    The document shows t-SNE plots that were used to identify different cell types in mouse lung tissue samples. The plots map single cells to two dimensions based on their gene expression profiles, allowing visualization of distinct clusters that likely correspond to different cell types like alveolar type 1 cells, alveolar type 2 cells, bronchial epithelial cells, ciliated cells, and Clara cells.

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    © All Rights Reserved
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    of 1

    treutlein_cell_type1

    2.5 2.5
    2.5

    tSNE2

    tSNE2
    0.0 0.0
    tSNE2

    0.0

    −2.5 −2.5 −2.5

    −5.0 −5.0 −5.0

    −6 −3 0 3 −6 −3 0 3 −6 −3 0 3
    tSNE1 tSNE1 tSNE1

    original AT1 AT2 BP ciliated Clara pins1 1 2 3 pins2 1−1 1−2 2−1 2−2 3

    2.5
    tSNE2 2.5 2.5

    0.0
    tSNE2

    tSNE2
    0.0 0.0

    −2.5
    −2.5 −2.5

    −5.0
    −5.0 −6 −3 0 3 −5.0

    −6 −3 0 3 tSNE1 −6 −3 0 3
    tSNE1 tSNE1
    1 3 5 7
    sincera
    sc3 1 2 3 2 4 6 8 seurat 0 1

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