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  • Zeisel tSNE Type1 PDF

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    Bang Tran
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    The document shows t-SNE plots that visualize cell types in mouse brain samples. There are three plots that each show cell types clustered in two-dimensional space, likely based on gene expression profiles. Labels indicate different cell types including neurons, astrocytes, oligodendrocytes, microglia and others. Numbers in the plots are used to classify individual cells.

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    zeisel_tSNE_type1.pdf

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    The document shows t-SNE plots that visualize cell types in mouse brain samples. There are three plots that each show cell types clustered in two-dimensional space, likely based on gene expression profiles. Labels indicate different cell types including neurons, astrocytes, oligodendrocytes, microglia and others. Numbers in the plots are used to classify individual cells.

    Copyright:

    © All Rights Reserved
    Download as PDF, TXT or read online from Scribd
    Flag for inappropriate content
    Download as pdf or txt
    30 views1 page

    Zeisel tSNE Type1 PDF

    Uploaded by

    Bang Tran
    The document shows t-SNE plots that visualize cell types in mouse brain samples. There are three plots that each show cell types clustered in two-dimensional space, likely based on gene expression profiles. Labels indicate different cell types including neurons, astrocytes, oligodendrocytes, microglia and others. Numbers in the plots are used to classify individual cells.

    Copyright:

    © All Rights Reserved
    Download as PDF, TXT or read online from Scribd
    Flag for inappropriate content
    Download as pdf or txt
    of 1

    zeisel_cell_type1

    30 30
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    tSNE2

    tSNE2

    tSNE2
    0 0 0

    −30
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    tSNE1 −50 −25 0 25 50 −50 −25 0 25 50
    tSNE1 tSNE1
    astrocytes endothelial interneurons mural s1pyramidal
    al
    ca1pyramidal ependymal microglia oligodendrocytes pins1 1 2 3 4 5 pins2 1−1 1−2 2−1 2−2

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    tSNE2

    tSNE2
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    tSNE2

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    tSNE1 −30

    1 16 22 29 35
    −50 −25 0 25 50
    10 17 23 3 4 tSNE1
    11 18 24 30 5
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    sc3 12 19 25 31 6 tSNE1 0 12 2 6
    13 2 26 32 7 1 13 3 7
    seurat
    14 20 27 33 8 1 3 5 7 10 14 4 8
    sincera
    15 21 28 34 9 2 4 6 8 11 15 5 9

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