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  • Swiss Model

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    Abdul Ghiffari
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    The document contains protein sequence information for several proteins, including sequences, structure IDs, alignment data, and modeling information. It provides the amino acid sequences of proteins identified as f0c167236781cf58dbb27fbba0a46b70MSPQVDTL and comparisons to other protein sequences and structures in databases like SwissModel, RaptorX, ModBase, and I-TASSER.

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    The document contains protein sequence information for several proteins, including sequences, structure IDs, alignment data, and modeling information. It provides the amino acid sequences of proteins identified as f0c167236781cf58dbb27fbba0a46b70MSPQVDTL and comparisons to other protein sequences and structures in databases like SwissModel, RaptorX, ModBase, and I-TASSER.

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    11 views24 pages

    Swiss Model

    Uploaded by

    Abdul Ghiffari
    The document contains protein sequence information for several proteins, including sequences, structure IDs, alignment data, and modeling information. It provides the amino acid sequences of proteins identified as f0c167236781cf58dbb27fbba0a46b70MSPQVDTL and comparisons to other protein sequences and structures in databases like SwissModel, RaptorX, ModBase, and I-TASSER.

    Copyright:

    © All Rights Reserved
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    of 24

    SWISS-MODEL

    RAPTORX
    >439611_1

    MSPQTETKASVGFKAGVKEYKLNYYTPQYQTKDTDILAAFRVTPQPGVPPEEAGAAVAAE

    SSTGTWTTVWTDGLTSLDRYKGRCYHIEPVAGEENQYICYVAYPLDLFEEGSVTNMFTSI

    VGNVFGFKALRALRLEDLRIPTSYVKTFQGPPHGIQVERDKLNKYGRPLLGCTIKPKLGL

    SAKNYGRAVYECLRGGLDFTKDDENVNSQPFMRWRDRFLFCAEALFKAQAETGEIKGHYL

    NATAGTCEEMMKRAIFARELGAPIVMHDYLTGGFTANTSLAHYCRDNGLLLHIHRAMHAV

    IDRQKNHGMHFRVLAKGLRMSGGDHVHAGTVVGKLEGERDITLGFVDLLRDDFIEKDRSR

    GIYFTQDWVSLPGVLPVASGGIHVWHMPALTEIFGDDSVLQFGGGTLGHPWGNAPGAVAN

    RVALEACVQARNEGRDLAREGNEIIRQASKWSPELAAACEVWKEIKFEFEAVDTL

    >1ir1A

    -----------EFKAGVKDYKLTYYTPEYETLDTDILAAFRVSPQPGVPPEEAGAAVAAE

    SSTGTWTTVWTDGLTNLDRYKGRCYHIEPVAGEENQYICYVAYPLDLFEEGSVTNMFTSI

    VGNVFGFKALRALRLEDLRIPVAYVKTFQGPPHGIQVERDKLNKYGRPLLGCTIKPKLGL

    SAKNYGRAVYECLRGGLDFTMDDENVNSQPFMRWRDRFLFCAEALYKAQAETGEIKGHYL

    NATAGTCEDMMKRAVFARELGVPIVMHDYLTGGFTANTTLSHYCRDNGLLLHIHRAMHAV

    IDRQKNHGMHFRVLAKALRLSGGDHIHSGTVVGKLEGERDITLGFVDLLRDDYTEKDRSR

    GIYFTQSWVSTPGVLPVASGGIHVWHMPALTEIFGDDSVLQFGGGTLGHPWGNAPGAVAN

    RVALEACVQARNEGRDLAREGNTIIREATKWSPELAAACEVWKEIKFEFPAMDTV
    >Alignment RMSD

    -----------8700000000000000000000000000000000000000000000000

    000000000000000000000000000000000000000000000000000000000000

    000000000000000000000000000000000000000000000000000000000000

    000000000000000000000000000000000000000000000000000000000000

    000000000000000000000000000000000000000000000000000000000000

    000000000000000000000000000000000000000000000000000000000000

    000000000000000000000000000000000000000000000000000000000000

    0000000000000000000000000000000000000000000000000000088
    MODBASE
    >P1;f0c167236781cf58dbb27fbba0a46b70MSPQVDTL sequence:f0c167236781cf58dbb27fbba0a46b70MSPQVDTL:7 : :475 :
    :f0c167236781cf58dbb27fbba0a46b70MSPQVDTL:Seq-Seq (1000):-1.00:-1.00
    TKASVGFKAGVKEYKLNYYTPQYQTKDTDILAAFRVTPQPGVPPEEAGAAVAAESSTGTWTTVWTDGLTSLDRYK
    GRCYHIEPVAGEENQYICYVAYPLDLFEEGSVTNMFTSIVGNVFGFKALRALRLEDLRIPTSYVKTFQGPPHGIQ
    VERDKLNKYGRPLLGCTIKPKLGLSAKNYGRAVYECLRGGLDFTKDDENVNSQPFMRWRDRFLFCAEALFKAQAE
    TGEIKGHYLNATAGTCEEMMKRAIFARELGAPIVMHDYLTGGFTANTSLAHYCRDNGLLLHIHRAMHAVIDRQKN
    HGMHFRVLAKGLRMSGGDHVHAGTVVGKLEGERDITLGFVDLLRDDFIEKDRSRGIYFTQDWVSLPGVLPVASGG
    IHVWHMPALTEIFGDDSVLQFGGGTLGHPWGNAPGAVANRVALEACVQARNEGRDLAREGNEIIRQASKWSPELA
    AACEVWKEIKFEFEAVDTL*

    >P1;1gk8A structureX:1gk8:7 :A:475 :A:1gk8A:Seq-Seq (1000):-1.00:-1.00


    TKAGAGFKAGVKDYRLTYYTPDYVVRDTDILAAFRMTPQPGVPPEECGAAVAAESSTGTWTTVWTDGLTSLDRYK
    GRCYDIEPVPGEDNQYIAYVAY-IDLFEEGSVTNMFTSIVGNVFGFKALRALRLEDLRIPPAYVKTFVG-PHGIQ
    VERDKLNKYGRGLLGCTIKPKLGLSAKNYGRAVYECLRGGLDFT-DDENVNSQPFMRWRDRFLFVAEAIYKAQAE
    TGEVKGHYLNATAGTCEEMMKRAV-AKELGVPIIMHDYLTGGFTANTSLAIYCRDNGLLLHIHRAMHAVIDRQRN
    HGIHFRVLAKALRMSGGDHLHSGTVVGKLEGEREVTLGFVDLMRDDYVEKDRSRGIYFTQDW-SMPGVMPVASGG
    IHVWHMPALVEIFGDDACLQFGGGTLGHPWGNAPGAAANRVALEACTQARNEGRDLAREGGDVIRSACKWSPELA
    AACEVWKEIKFEFDTIDKL*
    >P1;f0c167236781cf58dbb27fbba0a46b70MSPQVDTL sequence:f0c167236781cf58dbb27fbba0a46b70MSPQVDTL:1 : :475 :
    :f0c167236781cf58dbb27fbba0a46b70MSPQVDTL:Seq-Prf (0001):-1.00:-1.00 MSPQTETKASVGFKAGVKEY-
    KLNYYTPQYQTKDTDILAAFRVTPQPGVPPEEAGAAVAAESSTGTWTTVWTDGL
    TSLDRYKGRCYHIEPVAGEENQYICYVAYPLDLFEEGSVTNMFTSIVGNVFGFKALRALRLEDLRIPTSYVKTFQ
    GPPHGIQVERDKLNKYGRPLLGCTIKPKLGLSAKNYGRAVYECLRGGLDFTKDDENVNSQPFMRWRDRFLFCAEA
    LFKAQAETGEIKGHYLNATAGTCEEMMKRAIFARELGAPIVMHDYLTGGFTANTSLAHYCRDNGLLLHIHRAMHA
    VIDRQKNHGMHFRVLAKGLRMSGGDHVHAGTVVGKLEGERDITLGFVDLLRDDFIEKDRSRGIYFTQDWVSLPGV
    LPVASGGIHVWHMPALTEIFGDDSVLQFGGGTLGHPWGNAPGAVANRVALEACVQARNEGRDLAREG--NEIIRQ
    ASKWSPELAAACEVWKEIKFEFEAVDTL*

    >P1;5mz2A structureX:5mz2:5 :A:480 :A:5mz2A:Seq-Prf (0001):-1.00:-1.00 VSERTRIK-


    SDRYESGVIPYAKMGYWDAAYSVKDTDILALFRIT-QPGVDPVEAAAAVAGESSTATWTVVWTDLL
    TACERYRAKAYRVDPVPNSTDVYFAFIAYE-DLFEEASLSNLTASIIGNVFGFKAISALRLEDMRIPHSYLTFQG ATG--IIVERERLNKYGTP-
    LGATVKPKLGLSGKNYGRVVYEG--LGGLDFLDDENINSQPFMRWRERFLNCLEG
    INRAAAATGEVKGSYLNITAATMEEVYKRAEYAKAIGSVVVMID-LVMGYTAIQSIAYWARENDMLLHLHRAGNS
    TYARQKNHGINFRVICKWMRMSGVDHIHAGTVVGKLEGDP-LMIGFYDILRLTELEVNLPFGIFFEMDWASLRRC
    MPVASGGIHCGQMHQLIHYLGDDVVLQFGGGTIGHPDGIQAGATANRVALEAMVLARNEGADYFNNQVGPQILRD
    AAKTCGPLQTALDLWKDISFNYTSTDTA*
    I-TASSER

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