Professional Documents
Culture Documents
Long - 2013 - Toward Cool C4 Groups
Long - 2013 - Toward Cool C4 Groups
Long - 2013 - Toward Cool C4 Groups
ANNUAL
REVIEWS Further Toward Cool C4 Crops
Click here for quick links to
Annual Reviews content online,
including:
Stephen P. Long and Ashley K. Spence
• Other articles in this volume Institute for Genomic Biology, Department of Crop Sciences, and Department of Plant
Access provided by Universidade Federal de Mato Grosso on 04/04/16. For personal use only.
• Top cited articles Biology, University of Illinois, Urbana, Illinois 61801; email: slong@illinois.edu
• Top downloaded articles
Annu. Rev. Plant Biol. 2013.64:701-722. Downloaded from www.annualreviews.org
701
PP64CH28-Long ARI 28 March 2013 16:18
CHILLS? . . . . . . . . . . . . . . . . . . . . . . . . . 707
annual dry-matter yield for a crop is for the C4
WHAT MIGHT WE INFER FROM
Annu. Rev. Plant Biol. 2013.64:701-722. Downloaded from www.annualreviews.org
estimated to require a 70% increase in global chilling conditions, with particular reference to
grain production by 2050 if shortages are to the comparison of chilling-sensitive maize with
be avoided (62). World production of rice and its chilling-tolerant relative M. × giganteus.
wheat has been stagnating, which could place
even more pressure on maize (70). The United The C4 Process
States is not only the largest producer but also C4 species are characterized by their light-
the largest exporter (30). Could its production energy-driven mechanism of concentrating
be increased? In 2011, 87% of US maize CO2 at the site of ribulose-1,5-bisphosphate
grain was produced in the Midwest, with Iowa (RuBP) carboxylation via RuBP carboxy-
and Illinois accounting for almost half of this lase/oxygenase (RuBisCO) (reviewed in 95,
total (118). The growing season in this area is 103). This elevation of CO2 concentration
limited by temperature and averages just four ([CO2 ]) up to approximately 10 times the
Access provided by Universidade Federal de Mato Grosso on 04/04/16. For personal use only.
the cold-adapted and related C4 grass M. × inhibit the oxygenase reaction catalyzed by
giganteus was 59% more productive than a RuBisCO (which would otherwise lead to
modern cultivar of maize in Illinois owing to photorespiration) and the inefficiency in net
a longer growing season permitted by superior carbon gain that photorespiration causes in
cold tolerance (21). If similar cold tolerance released CO2 and consumption of ATP and
of C4 photosynthesis could be introduced NADPH in competition with photosynthesis
into maize, a close relative of Miscanthus, then (32, 63). By avoiding photorespiration, C4
significant gains could be made in global grain plants have on average an approximately 30%
productivity and future food security. This may higher potential photosynthetic productivity
also become important to the major effort in (129) and higher efficiencies of water and
engineering C4 photosynthesis into rice (54). nitrogen use (34) compared with C3 plants.
Significant areas of current global rice produc- This concentration mechanism requires the
tion are subject to chilling conditions during isolation of RuBisCO from the intercellular air
early growth (47). Understanding how maize space, which is achieved, with very few excep-
could be adapted to chilling may therefore be tions, by two distinct layers of photosynthetic
equally important in achieving effective C4 rice tissue arranged concentrically around the leaf
crops. vascular bundles. This arrangement, termed
The photosynthetic C4 dicarboxylate Kranz (i.e., wreath-like) anatomy, contains the
cycle and its distribution between dimor- mesophyll cells on the outside in contact with
phic photosynthetic cells are the only major the intercellular air space. The mesophyll cells
photosynthetic differences between a C4 and surround the bundle sheath cells, which are
C3 plant, and are thus key to understanding isolated from the air space but in contact with
why C4 plants appear less productive in the inner surfaces of the mesophyll cells via
cold conditions. Of particular interest is the multiple plasmodesmata (41, 80, 99, 121). The
functioning of the C4 process under chilling bundle sheath cells, as the name implies, typ-
conditions. Tolerance of these conditions is ically form a ring around the vascular bundle.
critical to growth in the late spring and early The mesophyll cells assimilate CO2 from the
autumn in continental-microthermal climates air space into the four-carbon acid oxaloacetate
and throughout the growing season in cool (OAA) via phosphoenolpyruvate carboxylase
temperate climates. Physiological and molecu- (PEPc), which is localized in the mesophyll cell
lar mechanisms of damage by and acclimation cytoplasm. The phosphoenolpyruvate (PEP)
to chilling temperatures that are common to is synthesized in the mesophyll chloroplasts
all plants have been recently reviewed in depth from pyruvate, catalyzed by pyruvate inorganic
(98). The objective of this review is to examine phosphate dikinase (PPDK), at the expense of
the potential for adapting the C4 process to two ATPs per PEP molecule formed. OAA is
either reduced to malate or aminated to aspar- of all three pathways may be found in individu-
tate. The four-carbon dicarboxylate diffuses als to varying degrees, with the balance varying
to the bundle sheath cells that surround the not just with clade and species but also with
vascular bundle and constitute the inner layer development and environment (32). All types
of the C4 Kranz anatomy. In the bundle sheath, are believed to use the same pathway of PEP
the dicarboxylate is decarboxylated by one of carboxylation and (with the possible exception
three pathways, directly or indirectly providing of some PEP-CK types) PEP synthesis by
pyruvate to complete the C4 dicarboxylate PPDK within the mesophyll. In each case, the
cycle (22, 32, 103). These three pathways have C4 cycle may be viewed as an accessory to the
been used to categorize C4 species: Calvin-Benson cycle, which utilizes additional
1. NADP-ME species reduce OAA to ATP to concentrate CO2 at the site of Ru-
BisCO in the bundle sheath, thereby inhibiting
malate in the mesophyll chloroplasts.
Access provided by Universidade Federal de Mato Grosso on 04/04/16. For personal use only.
This malate diffuses to the bundle sheath the oxygenation of RuBP (22, 103, 121).
Annu. Rev. Plant Biol. 2013.64:701-722. Downloaded from www.annualreviews.org
1.0
a mixture of light-limited and light-saturated
Annu. Rev. Plant Biol. 2013.64:701-722. Downloaded from www.annualreviews.org
10◦ C decrease in leaf temperature, RuBisCO gen use efficiency (NUE) of C4 plants. NUE
is therefore likely to become even more limit- does indeed decline in C4 plants relative to C3
ing at suboptimal temperatures, so preventing plants with decreased growth temperature (60).
expression of the advantages in Asat and Ac , pre- However, even when grown at 52◦ N, the C4
dicted in Figure 2 (61, 100). grasses M. × giganteus and Spartina cynosuroides
This could be overcome if RuBisCO in- show a superior NUE to C3 species (12).
creased during acclimation to chilling or were
already present at a high enough concentration
to avoid such limitation at low temperatures. It WHY DOES MAIZE SUFFER
has been argued, however, that C4 plants may THE CHILLS?
be physically unable to accommodate more Figure 2 shows that C4 plants are theoret-
RuBisCO. Because C4 photosynthesis requires ically superior in carbon assimilation at all
Access provided by Universidade Federal de Mato Grosso on 04/04/16. For personal use only.
half contain RuBisCO, effectively only half the achieves remarkably high rates of leaf CO2 up-
volume is available to accommodate RuBisCO take when growing at optimal temperatures.
relative to C3 leaves (100). In C3 leaves, However, leaves grown at 14◦ C have almost
chloroplasts commonly hug the mesophyll no photosynthetic capacity at any measurement
wall adjacent to the intercellular air space (38). temperature (Figure 1). Similarly, when plants
This is assumed to be because diffusion of are transferred from warm conditions to 14◦ C,
CO2 in liquid is very slow, and concentration mature leaves lose much of their photosyn-
diminishes greatly with distance from the air thetic capacity (123)—in contrast, for example,
space (27), which appears to limit the number to wheat (49). Given the considerable interest
and therefore volume of chloroplasts in C3 in extending the growing season of maize and
leaves. In the C4 bundle sheath, elevation extending its planting into colder climates, the
of CO2 concentration avoids this diffusional basis of its intolerance to cold temperatures has
restriction, and so more plastids could be received much attention (36, 74). Although low
included, in contrast to the C3 situation. This spring temperatures may limit germination and
is consistent with the observation that plastid root growth into the soil (48), through the sep-
distributions within C4 bundle sheaths can be arate chilling of roots and shoots in controlled
both centrifugal (next to the mesophyll) and environments, the most critical factor was
centripetal (next to the bundle sheath). They found to be shoot temperature during the light
may also be seen to visibly occupy significantly period (74). This conclusion was subsequently
more of the cross-sectional leaf area than their supported by field experiments showing that
mesophyll counterparts in the cool-tolerant C4 shading during periods of chilling protects pho-
grass Spartina anglica (68). As discussed below, tosynthetic capacity and production (5).
improved immunological methods for detect- Mature maize leaves exposed to temper-
ing changes in RuBisCO have now shown atures of 17◦ C and below in the light lose
significant increases in this protein during photosynthetic capacity through slow or irre-
acclimation to chilling in two cool-tolerant C4 versible photoinhibition of photosynthesis (65,
grasses (107). Further, one C4 species in partic- 66). The primary cause of this damage appears
ular, M. × giganteus, has provided proof that to be decreased capacity for photosynthetic car-
the high productivity efficiencies associated bon assimilation at low temperatures, which in
with C4 photosynthesis can be achieved in a turn decreases the rate of photochemical
cool temperate climate and that the photosyn- utilization of absorbed light energy, increasing
thetic apparatus can be acclimated to function excitation pressure within the thylakoid mem-
efficiently at chilling temperatures. Increased brane and the probability of photoinhibition
investment in photosynthetic enzymes would (66). This is consistent with the fact that the
be expected to offset the normally higher nitro- less vigorous and photosynthetically less active
40
is inhibited in maize during chilling, which
Annu. Rev. Plant Biol. 2013.64:701-722. Downloaded from www.annualreviews.org
dominant components of natural grasslands ing section explores the productivity of these
throughout Japan and eastern China, extending species and how they acclimate to chilling when
into Siberia (108, 110). Similarly, S. pectinata maize does not.
occurs in prairie and mixed grasslands to 61◦ N
in Canada, often dominating wetter microsites
(76). MISCANTHUS AND SPARTINA
These C4 plants in cold climates may be Although they include tropical species, these
divided into two groups: those that avoid two genera of rhizomatous perennial C4 grasses
chilling conditions and those that can accli- also include species and ecotypes that not only
mate to chilling conditions. Avoidance may extend into cold climates but have proved
be as seen in warm-season grasses, where highly productive in cool temperate climates.
growth is limited to the summer months, when
Access provided by Universidade Federal de Mato Grosso on 04/04/16. For personal use only.
was intercepting 80% of the available sunlight (Vpr ) and CO2,max . In the absence of any gain
Annu. Rev. Plant Biol. 2013.64:701-722. Downloaded from www.annualreviews.org
(21). These leaves had high rates of leaf or loss of enzyme protein and activation state,
photosynthesis throughout, with the exception with a Q10 of 2.2 for rate-limiting enzymes
of the very end of the growing season in late of carbon metabolism, Asat and Vpr should
October (20). The ability of M. × giganteus decline by 59% on reduction of temperature
to form photosynthetically competent leaves from 25◦ C to 14◦ C. This is a simple result of
earlier and maintain them later is therefore key the direct effect of the lowered measurement
to the 59% higher dry-matter productivity of temperature on enzyme kinetics. Whereas
this crop compared with maize (21). maize shows an even larger decline, consis-
tent with the decline in the amount of key
Miscanthus × giganteus: Physiological enzymes, upon acclimation, M. × giganteus
and Molecular Analysis of Acclimation shows a decline much lower than would
to Chilling be predicted simply from Q10 (Figure 4).
Why is M. × giganteus able to acclimate This could be explained by increases in the
to chilling conditions when maize is not? rate-limiting enzymes, RuBisCO and PPDK.
Figure 3 shows the result of growing leaves of The most striking difference is the amount
both species under warm conditions and then of these two enzymes considered to exert
transferring the plants to chilling conditions. metabolic control on Asat , PPDK and Ru-
The light-saturated photosynthetic capacity BisCO, which increase by approximately 100%
of plants grown at 14◦ C (measured as Asat at and 50%, respectively (Figure 4). Earlier
a leaf temperature of 14◦ C) declines in both studies failed to identify a significant increase
crops for the first two days. In M. × giganteus, in RuBisCO during chilling (79). Improved
Asat recovers over the subsequent seven days to techniques for immunological quantification
90% of the prechill level, whereas it continues of this abundant protein have now revealed a
to decline in maize, eventually losing >60% large, statistically significant increase (107).
of its prechill capacity (Figure 3). The most Theoretical analysis suggests that Asat
striking changes over this nine-day period in C4 photosynthesis could be limited by
are a 40% loss of RuBisCO and 75% loss of PEPc, PPDK, or RuBisCO activity or some
PPDK protein contents in maize (123). By combination of these (121). A decrease in the
contrast, M. × giganteus doubles its PPDK amount or activity of all three has been found
content and the number of transcripts coding in C4 species in response to chilling (79, 100,
for this protein (123) (Figure 3). When maize 122). PEPc would exert control only if Ci were
is grown throughout its life at 14◦ C, Asat is less insufficient to saturate photosynthesis (121),
than 10% of the rate for plants grown at 25◦ C which is generally not the case in either species
at all measurement temperatures (Figure 1). (21, 78) and is even less likely under chilling,
By contrast, at any given measurement tem- where Ci either remains constant or is increased
(Figure 4). Transgenic reduction in enzymes case of M. × giganteus, the increase in PPDK
of carbon metabolism has suggested that con- is striking and proportional to the doubling
trol is shared between PPDK and RuBisCO of photosynthetic capacity at ≤5◦ C observed
(33). However, significant research has pointed in the leaves developed under daytime chill-
to RuBisCO having control during chilling. ing conditions (Figure 1). Transgenic intro-
Transgenic reductions in RuBisCO activity in duction of a cold-tolerant PPDK into maize was
F. bidentis correlate closely with the reductions found to allow a significant 23% increase in Asat
in light-saturated photosynthesis at low tem- at chilling temperatures, providing further evi-
peratures (57). In two C4 species occurring in dence of a limiting role for this enzyme (84, 85).
cold climates, Bouteloua gracilis and Muhlenber- Further evidence of a common pattern comes
gia montanum, Asat at and below 20◦ C were very from the C4 plant sugarcane, in which chilling
similar to the maximum extractable activities of conditions resulted in a significant 60% loss of
Access provided by Universidade Federal de Mato Grosso on 04/04/16. For personal use only.
RuBisCO (90, 91, 101). In the case of PPDK, PPDK activity, whereas activity was maintained
Annu. Rev. Plant Biol. 2013.64:701-722. Downloaded from www.annualreviews.org
the tetrameric C4 isoform of the enzyme is cold or increased in two more cold-tolerant Saccha-
labile in vitro, with the subunits dissociating rum species (23). RuBisCO activity was rela-
below approximately 10◦ C (15), and activities tively little affected, and its activity remained
have been found minimally sufficient to sup- higher than PPDK and observed photosyn-
port in vivo rates of photosynthesis (reviewed thetic rates.
in 100). Within the genus Flaveria, different Both M. × giganteus and maize show
C4 species show a range of cold sensitivities an almost 2.5-fold increase in the leaf con-
in the PPDK that they express (15). F. brownii tent of zeaxanthin when grown at 14◦ C
has a more cold-stable form of PPDK, and this (Figure 4). Zeaxanthin formation is key to
has been associated with specific amino acid nonphotochemical quenching of light ab-
substitutions conferring this cold tolerance. By sorbed by the photosynthetic membrane. It
contrast, sequence analysis revealed few differ- accumulates by de-epoxidation of violaxanthin
ences in either PPDK or RuBisCO between in response to excess absorbed light energy
M. × giganteus and maize (79, 122). M. × relative to photosynthetic capacity. It serves to
giganteus and maize PPDK recombinantly dissipate the excess energy as heat and so mini-
expressed in E. coli showed no detectable mizes the potential for production of oxidizing
difference in the decline in in vitro activity radicals on the photosynthetic membrane. On
with decrease in temperature. However, the return to low light, zeaxanthin is epoxidated
concentration of PPDK in vitro at the levels to violaxanthin, removing this route for dis-
indicated for cold-acclimated M. × giganteus sipating absorbed light energy and allowing
did provide some protection against activity the reaction centers to operate at maximum
loss at low temperature (122). This suggests efficiency under light-limiting conditions (66).
two different evolutionary strategies to over- However, maize under chilling conditions re-
coming PPDK limitation: increased content tains zeaxanthin even in the dark, which appears
of the protein in M. × giganteus and increased to be a further factor causing its low CO2,max
cold stability of the protein in F. brownii. under chilling conditions (31) (Figure 4). In
It cannot be determined from the studies M. × giganteus, by contrast, there is no decline
summarized in Figure 4 whether increased in CO2,max (10), indicating that the large
PPDK, increased RuBisCO, or both are key to increase in zeaxanthin serves to dissipate excess
photosynthetic tolerance to low temperature in energy under light-saturating conditions but
M. × giganteus, because both increase with ac- does not impair light-limited photosynthesis.
climation to chilling temperatures. Previously,
it has been strongly argued from comparative Spartina
data with other C4 species that RuBisCO must Spartina, a genus of C4 grasses, is in many
be the limitation (57, 100). However, in the respects a New World parallel to Miscanthus,
extending in distribution from the tropics to though (as in M. × giganteus) to a lesser extent
61◦ N. Particular attention has been given to (a) (107). This common large increase in PPDK in
the highly productive coastal salt-marsh grasses chilling-tolerant C4 species from very separate
S. anglica and S. alterniflora, which extend in evolutionary lines provides further evidence for
distribution northward along the Atlantic the apparent importance of this protein in chill-
coasts to southern Norway and southern ing tolerance of C4 photosynthesis. The differ-
Canada, respectively (69), and (b) the prairie ence in S. pectinata and S. anglica in apparent
and brackish water-marsh grasses S. cynosuroides PPDK content could reflect either the fact that
and S. pectinata, which are considered potential these species are within different subgenera of
bioenergy grasses (14, 92, 120). S. pectinata Spartina (76) or the difficulty of extracting an
extends in distribution as far north as 59◦ N in active PPDK from these grasses (105).
northern Alberta (76). Although somewhat less
Access provided by Universidade Federal de Mato Grosso on 04/04/16. For personal use only.
cold-tolerant maize could yield 60–100% more How Might We Make C4 Crops
than current silage maize (11, 12). Because the Chilling Tolerant?
cattle and dairy operations served by maize M. × giganteus and its close relatives M. sinen-
silage will use grain once forage sources are sis, M. sacchariflorus, and M. lutarioriparius have
exhausted, this would also relieve pressure on already emerged as significant chilling-tolerant
global grain markets. C4 crops providing renewable feedstocks for
Sugarcane has emerged as arguably the bioproducts, for bioenergy, and potentially
world’s best biofuel crop. In 2009, Brazil for cellulosic biofuels (43, 53). These species
consumed 14.1 Mt of fossil fuel oil for trans- are capable of high productivities across large
portation, compared with 19.0 Mt of sugarcane areas with cool temperate or continental-
ethanol (50). This has not only almost halved microthermal climates (40, 59, 75). In addition
net greenhouse gas emissions from Brazilian to their chilling tolerance, their high yields and
Access provided by Universidade Federal de Mato Grosso on 04/04/16. For personal use only.
automobiles but has also enabled the produc- low water and nitrogen requirements (in part
Annu. Rev. Plant Biol. 2013.64:701-722. Downloaded from www.annualreviews.org
maize. There are clear functional reasons to perature have a reversed response, or that the
Annu. Rev. Plant Biol. 2013.64:701-722. Downloaded from www.annualreviews.org
expect both to play a key part in allowing C4 modulator is increased rather than decreased.
photosynthesis at chilling temperatures. Both RNA-seq now provides a relatively cheap
enzymes have associated regulatory proteins, method that could be applied to understand
and although less is known about these, it the expression network that underlies the differ-
must be assumed that both are maintained ence in acclimation to chilling between Miscant-
at adequate levels under chilling conditions hus and maize. This could lead back to a small
in M. × giganteus, given its high photosyn- number of changes, at the level of transcrip-
thetic rates. Activation of RuBisCO was only tion control, needed to achieve chilling toler-
slightly decreased in leaves of M. × giganteus ance. These changes may possibly parallel or
developed under chilling conditions (122). In be part of the network that induces the changes
M. × giganteus, the increase in PPDK is closely involved in general plant acclimation to chilling
correlated with an upregulation of transcripts conditions established for the chilling-tolerant
for the single gene that codes for this protein, C3 plant Arabidopsis thaliana (98). Alternatively,
whereas downregulation occurs in maize (123). chilling tolerance may be achieved posttransla-
One strategy to confer cold tolerance to tionally by ubiquitination of PPDK and other
maize might therefore be to transgenically key proteins, slowing protein turnover and al-
upregulate the expression of PPDK. An lowing accumulation of these proteins (124).
alternative strategy would be to evolve a more Miscanthus spp. are assumed to have arisen in
cold-tolerant form of the enzyme that could the tropics and have evolved increasingly cold-
maintain a higher kcat at chilling temperatures. tolerant forms in a relatively short evolution-
Such a change appears to have occurred in ary time frame, allowing the species to colonize
the chilling-tolerant C4 dicot F. brownii but grasslands as far north as Siberia. This suggests
not in M. × giganteus (15, 79, 86, 123). Engi- that the chilling-tolerance syndrome may re-
neering the key amino acid changes conferring quire relatively few genetic changes.
improved PPDK cold tolerance into maize Achieving the above in maize and other ma-
did result in a significant improvement of jor C4 crops is likely to require transgenic modi-
leaf photosynthesis at low temperatures (84, fication, site-directed mutagenesis, or both (84,
85). However, the full advantage of increased 85). Are there also prospects for achieving this
PPDK levels could not be realized because the through “conventional” breeding?
PPDK regulatory protein was not elevated (85).
Another approach would be to discover and
manipulate the regulatory elements that result Interspecific Breeding for
in increases in PPDK, RuBisCO, and associ- Chilling Tolerance
ated proteins in Miscanthus. The recruitment of Although variability in chilling tolerance
the C3 PPDK-encoding gene in the evolution has been identified in maize, sorghum, and
sugarcane germplasm and that of their im- same tribe, maize is significantly more distant
mediate relatives, it is small compared with from Miscanthus in terms of genome similarity
the differences between M. × giganteus (87). However, wide crosses of maize to oat,
and these crops (1, 23, 79, 89). Miscanthus, which is genetically far more distant, have
Saccharum, Sorghum, and Zea are all gen- allowed introgression of maize genes into oat,
era of Andropogoneae and thus are closely suggesting that wide crosses with Miscanthus
related. A recent analysis showed that the would not be impossible (8, 116). Alternatively,
basic Miscanthus genome (n = 19) is in fact maize has been successfully and beneficially
a doubled sorghum genome (n = 10) in transformed with genes from a wide range
which a duplication event was followed by of sources, providing an alternative route for
rearrangement of the genome onto one fewer introducing cold tolerance from Miscanthus.
chromosomes (112). The sugarcane genome, in M. × giganteus is proof that the benefits
Access provided by Universidade Federal de Mato Grosso on 04/04/16. For personal use only.
contrast, is an eightfold multiplication relative of highly efficient light, nitrogen, and water
Annu. Rev. Plant Biol. 2013.64:701-722. Downloaded from www.annualreviews.org
to the sorghum genome (n = 80) (72, 126). use associated with C4 photosynthesis can be
Despite differences in ploidy, fertile crosses realized in cool temperate and continental-
between M. sinensis, one of the parents of microthermal climates. Importantly, it shows
M. × giganteus, and sugarcane have been that there is no fundamental barrier to extend-
obtained several times in breeding for cane ing the beneficial aspects of C4 photosynthesis
disease resistance (3). Although these crosses into colder climates. Breeding or engineering
have been with tropical ecotypes of M. sinensis, similar changes into maize could have profound
it seems equally feasible that the cold tolerance effects on global food and feed supply at a time
of northern populations of Miscanthus could when this may be much needed. Achieving this
be similarly introgressed into sugarcane. will require a far deeper understanding of the
Although far less routine, a genetic muta- genetic basis of the changes that have occurred
tion has been identified that overcomes the in Miscanthus to allow the acclimation of the
interspecific infertility barrier in sorghum, C4 apparatus to chilling conditions. This goal
potentially allowing crosses with Miscanthus (7) has been made far more feasible by recent and
and similarly suggesting a means to introgress rapid advances in the gene space sequencing and
chilling tolerance. Although they are within the structural genomics of Miscanthus (111, 112).
DISCLOSURE STATEMENT
S.P.L. is supported by funding from the Energy Biosciences Institute (which is supported by the
BP Group) and from the Bill & Melinda Gates Foundation. A.K.S. was supported in her graduate
studies by the Energy Biosciences Institute and is currently an employee of Procter & Gamble.
ACKNOWLEDGMENTS
We thank Rachel Shekar and an anonymous reviewer for their constructive comments on the
manuscript, and the Energy Biosciences Institute for support to both authors.
LITERATURE CITED
1. Aguilera C, Stirling CM, Long SP. 1999. Genotypic variation within Zea mays for susceptibility to and
rate of recovery from chill-induced photoinhibition of photosynthesis. Physiol. Plant. 106:429–36
2. Allen DJ, Ort DR. 2001. Impacts of chilling temperatures on photosynthesis in warm-climate plants.
Trends Plant Sci. 6:36–42
3. Altpeter F, Oraby H. 2010. Sugarcane. In Genetic Modification of Plants: Agriculture, Horticulture and
Forestry, ed. F Kempken, H Lorz, T Nagata, pp. 453–72. Berlin: Springer-Verlag
4. Atwell BJ, Kriedemann PE, Turnbull CGN. 1999. Plants in Action: Adaptation in Nature, Performance in
Cultivation. Melbourne: Macmillan Educ. Aust. 660 pp.
5. Baker NR, Bradbury M, Farage PK, Ireland CR, Long SP. 1989. Measurements of the quantum yield of
carbon assimilation and chlorophyll fluorescence for assessment of photosynthetic performance of crops
in the field. Philos. Trans. R. Soc. Lond. B 323:295–308
6. Barriere Y, Alber D, Dolstra O, Lapierre C, Motto M, et al. 2006. Past and prospects of forage maize
breeding in Europe. II. History, germplasm evolution and correlative agronomic changes. Maydica
51:435–49
7. Bartek MS, Hodnett GL, Burson BL, Stelly DM, Rooney WL. 2012. Pollen tube growth after inter-
generic pollinations of iap-homozygous sorghum. Crop Sci. 52:1553–60
8. Baum M, Lagudah ES, Appels R. 1992. Wide crosses in cereals. Annu. Rev. Plant Physiol. Plant Mol. Biol.
Access provided by Universidade Federal de Mato Grosso on 04/04/16. For personal use only.
43:117–43
Annu. Rev. Plant Biol. 2013.64:701-722. Downloaded from www.annualreviews.org
9. Beadle CL, Long SP. 1985. Photosynthesis—is it limiting to biomass production? Biomass 8:119–68
10. Beale CV, Bint DA, Long SP. 1996. Leaf photosynthesis in the C4 -grass Miscanthus × giganteus, growing
in the cool temperate climate of southern England. J. Exp. Bot. 47:267–73
11. Beale CV, Long SP. 1995. Can perennial C4 grasses attain high efficiencies of radiant energy-conversion
in cool climates? Plant Cell Environ. 18:641–50
12. Beale CV, Long SP. 1997. Seasonal dynamics of nutrient accumulation and partitioning in the perennial
C4 -grasses Miscanthus × giganteus and Spartina cynosuroides. Biomass Bioenergy 12:419–28
13. Bennell AP, Gregory NM, Schwarz E. 1995. Logan Botanic Garden. Edinburgh: R. Bot. Gard. Edinb.
14. Boe A, Owens V, Gonzalez-Hernandez J, Stein J, Lee DK, Koo BC. 2009. Morphology and biomass
production of prairie cordgrass on marginal lands. Glob. Change Biol. Bioenergy 1:240–50
15. Burnell JN. 1990. A comparative study of the cold-sensitivity of pyruvate, Pi dikinase in Flaveria species.
Plant Cell Physiol. 31:295–97
16. Chen H, Tian H, Liu M, Melillo J, Pan S, Zhang C. 2006. Effect of land-cover change on terrestrial
carbon dynamics in the southern United States. J. Environ. Q. 35:1533–47
17. Christian DG, Riche AB, Yates NE. 2008. Growth, yield and mineral content of Miscanthus × giganteus
grown as a biofuel for 14 successive harvests. Ind. Crops Prod. 28:320–27
18. Crowley JG. 1998. Improving Yield and Quality of Forage Maize. Dublin: Teagasc
19. Dohleman FG, Heaton EA, Arundale RA, Long SP. 2012. Seasonal dynamics of above- and below-
ground biomass and nitrogen partitioning in Miscanthus × giganteus and Panicum virgatum across three
growing seasons. Glob. Change Biol. Bioenergy 4:534–44
20. Dohleman FG, Heaton EA, Leakey ADB, Long SP. 2009. Does greater leaf-level photosynthesis explain
the larger solar energy conversion efficiency of Miscanthus relative to switchgrass? Plant Cell Environ.
32:1525–37
21. Dohleman FG, Long SP. 2009. More productive than maize in the Midwest: How does Miscanthus do
it? Plant Physiol. 150:2104–15
22. Drincovich MF, Lara MV, Andreo CS, Maurino VG. 2011. C4 decarboxylases: different solutions for
the same biochemical problem, the provision of CO2 to Rubisco in the bundle sheath cells. See Ref. 96,
pp. 277–300
23. Du YC, Nose A, Wasano K. 1999. Effects of chilling temperature on photosynthetic rates, photosynthetic
enzyme activities and metabolite levels in leaves of three sugarcane species. Plant Cell Environ. 22:317–24
24. Ehleringer J, Björkman O. 1977. Quantum yields for CO2 uptake in C3 and C4 plants: dependence on
temperature, CO2 , and O2 concentration. Plant Physiol. 59:86–90
25. Ehleringer JR. 1978. Implications of quantum yield differences on distributions of C3 and C4 grasses.
Oecologia 31:255–67
26. Ercoli L, Mariotti M, Masoni A, Arduini I. 2004. Growth responses of sorghum plants to chilling
temperature and duration of exposure. Eur. J. Agron. 21:93–103
27. Evans JR, Kaldenhoff R, Genty B, Terashima I. 2009. Resistances along the CO2 diffusion pathway
inside leaves. J. Exp. Bot. 60:2235–48
28. Farage PK, Blowers D, Long SP, Baker NR. 2006. Low growth temperatures modify the efficiency of
light use by photosystem II for CO2 assimilation in leaves of two chilling-tolerant C4 species, Cyperus
longus L. and Miscanthus × giganteus. Plant Cell Environ. 29:720–28
29. Farage PK, Long SP. 1987. Damage to maize photosynthesis in the field during periods when chilling
is combined with high photon fluxes. In Progress in Photosynthesis Research, ed. J Biggins, 4:139–42.
Dordrecht: Nijhoff
30. Food Agric. Organ. UN. 2012. FAOSTAT. Rome: Food Agric. Organ. UN. http://faostat.fao.org
31. Fryer MJ, Oxborough K, Martin B, Ort DR, Baker NR. 1995. Factors associated with depression of
photosynthetic quantum efficiency in maize at low growth temperature. Plant Physiol. 108:761–67
32. Furbank RT. 2011. Evolution of the C4 photosynthetic mechanism: Are there really three C4 acid
decarboxylation types? J. Exp. Bot. 62:3103–8
33. Furbank RT, Chitty JA, Jenkins CLD, Taylor WC, Trevanion SJ, et al. 1997. Genetic manipulation of
key photosynthetic enzymes in the C4 plant Flaveria bidentis. Aust. J. Plant Physiol. 24:477–85
Access provided by Universidade Federal de Mato Grosso on 04/04/16. For personal use only.
34. Ghannoum O, Evans JR, von Caemmerer S. 2011. Nitrogen and water use efficiency of C4 plants. See
Annu. Rev. Plant Biol. 2013.64:701-722. Downloaded from www.annualreviews.org
53. Jones MB, Walsh M. 2001. Miscanthus for Energy and Fibre. London: James and James
54. Kajala K, Covshoff S, Karki S, Woodfield H, Tolley BJ, et al. 2011. Strategies for engineering a two-celled
C4 photosynthetic pathway into rice. J. Exp. Bot. 62:3001–10
55. Kottek M, Grieser J, Beck C, Rudolf B, Rubel F. 2006. World map of the Koppen-Geiger climate
classification updated. Meteorol. Z. 15:259–63
56. Kubien DS, Sage RF. 2003. C4 grasses in boreal fens: their occurrence in relation to microsite charac-
teristics. Oecologia 137:330–37
57. Kubien DS, von Caemmerer S, Furbank RT, Sage RF. 2003. C4 photosynthesis at low temperature. A
study using transgenic plants with reduced amounts of Rubisco. Plant Physiol. 132:1577–85
58. Lafarge T, de Raissac M, Tardieu F. 1998. Elongation rate of sorghum leaves has a common response
to meristem temperature in diverse African and European environmental conditions. Field Crops Res.
58:69–79
59. Liu W, Yan J, Li JQ, Sang T. 2012. Yield potential of Miscanthus energy crops in the Loess Plateau of
Access provided by Universidade Federal de Mato Grosso on 04/04/16. For personal use only.
60. Long SP. 1983. C4 photosynthesis at low temperatures. Plant Cell Environ. 6:345–63
61. Long SP. 1999. Environmental responses. In C4 Plant Biology, ed. RF Sage, RK Monson, pp. 215–49.
San Diego: Academic
62. Long SP. 2012. Virtual special issue on food security: greater than anticipated impacts of near-term
global atmospheric change on rice and wheat. Glob. Change Biol. 18:1489–90
63. Long SP, Ainsworth EA, Rogers A, Ort DR. 2004. Rising atmospheric carbon dioxide: plants face the
future. Annu. Rev. Plant Biol. 55:591–628
64. Long SP, Bolharnordenkampf HR, Croft SL, Farage PK, Lechner E, Nugawela A. 1989. Analysis of
spatial variation in CO2 uptake within the intact leaf and its significance in interpreting the effects of
environmental stress on photosynthesis. Philos. Trans. R. Soc. Lond. B 323:385–95
65. Long SP, East TM, Baker NR. 1983. Chilling damage to photosynthesis in young Zea mays: I. Effects
of light and temperature variation on photosynthetic CO2 assimilation. J. Exp. Bot. 34:177–88
66. Long SP, Humphries S, Falkowski PG. 1994. Photoinhibition of photosynthesis in nature. Annu. Rev.
Plant Physiol. Plant Mol. Biol. 45:633–62
67. Long SP, Incoll LD. 1979. Prediction and measurement of photosynthetic rate of Spartina townsendii
(sensu lato) in the field. J. Appl. Ecol. 16:879–91
68. Long SP, Incoll LD, Woolhouse HW. 1975. C4 photosynthesis in plants from cool temperate regions,
with particular reference to Spartina townsendii. Nature 257:622–24
69. Long SP, Mason CF. 1983. Saltmarsh Ecology. Glasgow: Blackie
70. Long SP, Ort DR. 2010. More than taking the heat: crops and global change. Curr. Opin. Plant Biol.
13:241–48
71. Long SP, Woolhouse HW. 1978. Responses of net photosynthesis to light and temperature in Spartina
townsendii (sensu lato), a C4 species from a cool temperate climate. J. Exp. Bot. 29:803–14
72. Ma XF, Jensen E, Alexandrov N, Troukhan M, Zhang LP, et al. 2012. High resolution genetic mapping by
genome sequencing reveals genome duplication and tetraploid genetic structure of the diploid Miscanthus
sinensis. PLoS ONE 7:e33821
73. Matsuba K, Imaizumi N, Kaneko S, Samejima M, Ohsugi R. 1997. Photosynthetic responses to tem-
perature of phosphoenolpyruvate carboxykinase type C4 species differing in cold sensitivity. Plant Cell
Environ. 20:268–74
74. Miedema P, Post J, Groot PJ. 1987. The Effects of Low Temperature on Seedling Growth of Maize Genotypes.
Wageningen: Pudoc
75. Miguez FE, Maughan M, Bollero GA, Long SP. 2012. Modeling spatial and dynamic variation in growth,
yield, and yield stability of the bioenergy crops Miscanthus × giganteus and Panicum virgatum across the
conterminous United States. Glob. Change Biol. Bioenergy 4:509–20
76. Mobberley DG. 1956. Taxonomy and distribution of the genus Spartina. Iowa State Coll. J. Sci. 30:471–
574
77. Nagai T, Makino A. 2009. Differences between rice and wheat in temperature responses of photosynthesis
and plant growth. Plant Cell Physiol. 50:744–55
78. Naidu SL, Long SP. 2004. Potential mechanisms of low-temperature tolerance of C4 photosynthesis in
Miscanthus × giganteus: an in vivo analysis. Planta 220:145–55
79. Naidu SL, Moose SP, Al-Shoaibi AK, Raines CA, Long SP. 2003. Cold tolerance of C4 photosynthesis
in Miscanthus × giganteus: adaptation in amounts and sequence of C4 photosynthetic enzymes. Plant
Physiol. 132:1688–97
80. Nelson T. 2011. Development of leaves in C4 plants: anatomical features that support C4 metabolism.
See Ref. 96, pp. 147–59
81. Nie GY, Baker NR. 1991. Modifications to thylakoid composition during development of maize leaves
at low growth temperatures. Plant Physiol. 95:184–91
82. Nie GY, Robertson EJ, Fryer MJ, Leech RM, Baker NR. 1995. Response of the photosynthetic apparatus
in maize leaves grown at low temperature on transfer to normal growth temperature. Plant Cell Environ.
18:1–12
83. Nott A, Jung HS, Koussevitzky S, Chory J. 2006. Plastid-to-nucleus retrograde signaling. Annu. Rev.
Access provided by Universidade Federal de Mato Grosso on 04/04/16. For personal use only.
104. Sheen J. 1999. C4 gene expression. Annu. Rev. Plant Physiol. Plant Mol. Biol. 50:187–217
105. Smith AM, Woolhouse HW. 1983. Metabolism of phosphoenolpyruvate in the C4 cycle during photo-
synthesis in the phosphoenolpyruvate-carboxykinase C4 grass Spartina anglica Hubb. Planta 159:570–78
106. Somerville C, Youngs H, Taylor C, Davis SC, Long SP. 2010. Feedstocks for lignocellulosic biofuels.
Science 329:790–92
107. Spence AK. 2012. Understanding the physiological and molecular basis of chilling tolerance across species of the
C4 genera Miscanthus and Spartina. PhD thesis, Univ. Ill., Urbana-Champaign. 155 pp.
108. Stewart JR, Toma Y, Fernandez FG, Nishiwaki A, Yamada T, Bollero G. 2009. The ecology and agron-
omy of Miscanthus sinensis, a species important to bioenergy crop development, in its native range in
Japan: a review. Glob. Change Biol. Bioenergy 1:126–53
109. Stirling CM, Nie GY, Aguilera C, Nugawela A, Long SP, Baker NR. 1991. Photosynthetic productivity
of an immature maize crop: changes in quantum yield of CO2 assimilation, conversion efficiency and
thylakoid proteins. Plant Cell Environ. 14:947–54
Access provided by Universidade Federal de Mato Grosso on 04/04/16. For personal use only.
110. Sun Q, Lin Q, Yi Z-L, Yang Z-R, Zhou F-S. 2010. A taxonomic revision of Miscanthus s.l. (Poaceae)
Annu. Rev. Plant Biol. 2013.64:701-722. Downloaded from www.annualreviews.org
127. Zhang Y, Fu JJ, Gu RL, Wang JH, Chen XP, et al. 2009. Isolation and analysis of cold stress inducible
genes in Zea mays by suppression subtractive hybridization and cDNA macroarray. Plant Mol. Biol. Rep.
27:38–49
128. Zheng J, Zhao JF, Zhang JP, Fu JJ, Gou MY, et al. 2006. Comparative expression profiles of maize genes
from a water stress-specific cDNA macroarray in response to high-salinity, cold or abscisic acid. Plant
Sci. 170:1125–32
129. Zhu XG, Long SP, Ort DR. 2008. What is the maximum efficiency with which photosynthesis can
convert solar energy into biomass? Curr. Opin. Biotechnol. 19:153–59
130. Zhu XG, Long SP, Ort DR. 2010. Improving photosynthetic efficiency for greater yield. Annu. Rev.
Plant Biol. 61:235–61
131. Zimmermann J, Dauber J, Jones MB. 2012. Soil carbon sequestration during the establishment phase of
Miscanthus × giganteus: a regional-scale study on commercial farms using 13 C natural abundance. Glob.
Change Biol. Bioenergy 4:453–61
Access provided by Universidade Federal de Mato Grosso on 04/04/16. For personal use only.
Annu. Rev. Plant Biol. 2013.64:701-722. Downloaded from www.annualreviews.org
Annual Review of
Plant Biology
Elisabeth Gantt p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p 1
Annu. Rev. Plant Biol. 2013.64:701-722. Downloaded from www.annualreviews.org
v
PP64-frontmatter ARI 25 March 2013 10:21
vi Contents
PP64-frontmatter ARI 25 March 2013 10:21
Davide Bulgarelli, Klaus Schlaeppi, Stijn Spaepen, Emiel Ver Loren van Themaat,
and Paul Schulze-Lefert p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p p 807
Annu. Rev. Plant Biol. 2013.64:701-722. Downloaded from www.annualreviews.org
Indexes
Errata
An online log of corrections to Annual Review of Plant Biology articles may be found at
http://www.annualreviews.org/errata/arplant
Contents vii