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Mitochondrial Pyruvate Carrier Regulates Autophagy, in Ammation, and Neurodegeneration in Experimental Models of Parkinsons Disease
Mitochondrial Pyruvate Carrier Regulates Autophagy, in Ammation, and Neurodegeneration in Experimental Models of Parkinsons Disease
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Mitochondrial and autophagic dysfunction as well as neuroinflammation are involved in the pathophysiology of
Parkinson’s disease (PD). We hypothesized that targeting the mitochondrial pyruvate carrier (MPC), a key controller
of cellular metabolism that influences mTOR (mammalian target of rapamycin) activation, might attenuate neuro-
degeneration of nigral dopaminergic neurons in animal models of PD. To test this, we used MSDC-0160, a compound
that specifically targets MPC, to reduce its activity. MSDC-0160 protected against 1-methyl-4-phenylpyridinium (MPP+)
insult in murine and cultured human midbrain dopamine neurons and in an a-synuclein–based Caenorhabditis elegans
molecular pathways that are perturbed in PD and reduce neurodegen- Some mice were pretreated with MSDC-0160, whereas controls received
eration in cellular and animal models of PD. vehicle. Twenty-four hours later, the mice were subjected to a subacute
MPTP regimen, that is, five daily injections of MPTP (25 mg/kg per day
intraperitoneally) (48, 49). During this time, mice received daily oral
RESULTS gavage of MSDC-0160 or vehicle for a total of 11 days (fig. S4A). Four
Protective role of MPC modulation in cellular and days after the last MPTP injection, we tested the mice for spontaneous
nematode models locomotion in an open-field arena and for motor coordination on the
Previous studies have shown that micromolar concentrations of rotarod test. Consistent with previous reports (48, 50, 51), MPTP injec-
MSDC-0160 acutely modulate the metabolism of pyruvate in multiple tions caused significant impairment on both tests, with decreases in dis-
cells types, including neurons, through a direct interaction with MPC tance traveled, speed, and mobility time in the open field, as well as time
(24). We hypothesized that this modulation of MPC function by spent on the rotating rod. However, MSDC-0160 pretreatment attenu-
MSDC-0160 would protect compromised dopaminergic neurons in ated or prevented these deficits (Fig. 2, A and B, and fig. S4B). The
models of PD both in vitro and in vivo. We used several model brains from treated mice were subjected to immunohistochemistry, ste-
systems to evaluate the potential pathways involved. reological counting of neurons, and high-performance liquid chroma-
We found that modulation of MPC shielded cultured human, tography (HPLC) and Western blot analyses. As expected (47, 48),
murine, and invertebrate dopaminergic neurons from 1-methyl-4- MPTP treatment induced a loss of dopaminergic neurons and terminals
phenylpyridinium (MPP+) toxicity (Fig. 1, B, G, and K, and fig. S1, A in the substantia nigra and striatum, respectively (Fig. 2, C to E), a re-
Fig. 1. MSDC-0160 protects dopaminergic neurons against MPP+-induced toxicity in cell cultures and C. elegans. LUHMES cells were pretreated with 10 mM MSDC-
0160 (0160) for 1 hour followed by 10 mM MPP+ treatment for 24 hours. (A) Double-label immunocytochemistry for TH and Tuj1 in LUHMES cells. (B) Number of TH-positive
dopaminergic neurons, (C) mean neurite length (mm), (D) neurite branching points in each neuron, and (E) longest neurite length (mm). Primary mesencephalic mouse neurons
were pretreated with 10 mM MSDC-0160 for 1 hour followed by 10 mM MPP+ treatment for 24 hours. (F) Double-label immunocytochemistry for TH and Tuj1 in primary
mesencephalic culture. (G) Number of TH-positive dopaminergic neurons, (H) mean neurite length (mm), (I) neurite branching points in each neuron, and (J) longest neurite
length (mm). C. elegans were synchronized, and L1 larvae were placed in 96-well plates containing OP50 bacteria in liquid culture (6 mg/ml) and MPP+ (0.75 mM) with MSDC-
0160 (1, 10, and 100 mM) for 48 hours. (K) Quantification of percent dopaminergic neuron loss in C. elegans. Scale bars, 50 mm. Data are means ± SEM of three independent
experiments. ****P < 0.0001, ***P < 0.001, **P < 0.01, *P < 0.05, analyzed by one-way analysis of variance (ANOVA) with Tukey’s multiple comparison test.
Fig. 2. MSDC-0160 improves motor behavior, protects nigrostriatal neurons, and suppresses disease progression in the MPTP mouse model of PD. (A) Open-field
parameters: distance traveled (cm), mean speed (cm/s), and time spent mobile (s). (B) Time spent on rotarod (s). (C) Diaminobenzidine immunohistochemistry for TH in
substantia nigra (SN; upper panel) and striatum (ST; lower panel) of MPTP mice. (D) Stereological counting of TH-positive neurons from the SN. (E) Relative density of TH-positive
neuronal fibers in the ST. Quantification of (F) dopamine (ng/mg) and (G) the dopamine metabolite DOPAC (ng/mg) by HPLC in the ST. (H) Representative Western blots
illustrating the expression of TH in SN and ST. Bar graph showing mean Western blot TH/b-actin in SN (I) and in ST (J). For the disease progression studies, mice were administered
MSDC-0160 (30 mg/kg per day) starting 3 days after MPTP treatment, with continuing treatment for another 7 days. (K) Stereological counting of TH-positive neurons from SN. (L)
Relative density of TH-positive neuronal fibers in ST. Quantification of striatal (M) dopamine and (N) DOPAC by HPLC. Scale bars, 50 mm (SN) and 200 mm (ST). Data are means ±
SEM of 7 to 10 mice per group. ****P < 0.0001, ***P < 0.001, **P < 0.01, *P < 0.05. Data were analyzed by one-way ANOVA with Tukey’s multiple comparison test.
Fig. 3. MSDC-0160 improves motor behavior in the open-field and rotarod tests in the En1+/− genetic mouse model of PD. (A) Schedule for MSDC-0160 treatment of
En1+/− mice in the mild pathology stage. (B) Schedule for MSDC-0160 treatment of En1+/− mice in the modest pathology stage. (C) Distance traveled (cm), (D) mean speed (cm/s),
(E) maximum speed (cm/s), and (F) time on rotarod (s) in the mild pathology stage. WT, wild type. (G) Distance traveled (cm), (H) mean speed (cm/s), (I) maximum speed (cm/s),
and (J) time on rotarod (s) in the modest pathology stage. Data are means ± SEM of 8 to 12 mice per group. ***P < 0.001, **P < 0.01, *P < 0.05, oP < 0.05 to 0.1. Data were analyzed
using linear mixed-effects regression analysis with false discovery rate (FDR)–corrected P values.
until euthanasia at week 28 or week 48. At the modest pathology stage, On the basis of the literature, we hypothesized that the mammalian
En1+/− mice were fed the same diet starting at week 8 until euthanasia target of rapamycin (mTOR) pathway is involved downstream of
at week 16 or week 28. At each time point, we assayed motor behavior, MPC (29, 56–59). In nematodes, we knocked down genes of interest
and after euthanasia, we performed immunohistochemistry, Western related to MPC and to the mTOR pathway by RNA interference and
blotting, and HPLC analysis to examine dopaminergic markers and neu- evaluated whether the knockdown of these genes affected the protec-
rotransmitter concentrations. For motor behaviors, including sponta- tion of A53T a-synuclein–induced dopaminergic neurons from degen-
neous activity in the open-field and coordination testing on the rotarod, eration by MSDC-0160. MSDC-0160 treatment prevented neuron loss
the MSDC-0160–treated group exhibited improvements on all mea- due to the A53T mutation in a-synuclein in control worms, which were
sures (Fig. 3, C to G, fig. S5, and table S1). fed bacteria expressing the empty vector L4440 (Fig. 5C). Knockdown
For all outcomes, the En1+/− non–MSDC-0160–treated control of BRP44L (the ortholog of MPC-1) prevented neuroprotection by
group of mice performed significantly worse than did the wild-type MSDC-0160 (Fig. 5D). Furthermore, knockdown of AKT-1 (a serine/
control mice (see the En1 genotype variable in table S1 for adjusted threonine kinase that functions upstream of RHEB-1; Fig. 5E), RHEB-
and unadjusted P values). Treatment with MSDC-0160 did not signif- 1 (a guanosine triphosphatase that is a stimulator of the mTOR
icantly affect the behavior of wild-type mice. However, the En1+/− pathway; Fig. 5F), or LET-363 (the C. elegans ortholog of the human
group treated with MSDC-0160 showed evidence of improvement (af- mTOR protein; Fig. 5G) also prevented the neuroprotection exerted by
ter false discovery multiple testing adjustments) in mean maze speed MSDC-0160 in this dopaminergic neuronal loss assay. By contrast,
for the groups that started on MSDC-0160 at 3 and 8 weeks of age knockdown of AAK-1, which is a homolog of adenosine monopho-
Fig. 4. MSDC-0160 prevents dopaminergic neurodegeneration in the En1+/− genetic mouse model of PD. (A) TH immunostaining in the SN. (B) Stereological counting
of TH-immunoreactive (TH+) neurons in the SN. (C) Representative Western blot illustrating the expression of TH in the SN. (D) Bar graph showing mean Western blot TH/
b-actin ratios in SN, quantification of striatal (E) dopamine (ng/mg), and (F) DOPAC (ng/mg) by HPLC in the mild pathology stage. (G) TH immunostaining in SN (upper panel
pictures are from 16 weeks of age, and lower panel pictures are from 28 weeks of age). Scale bars, 50 mm. (H) Stereological counting of TH-positive neurons in SN from 16 weeks of
age. (I) Stereological counting of TH-positive neurons in SN from 28 weeks of age. (J) Representative Western blot illustrating the expression of TH in SN from 16 weeks of age (top)
and 28 weeks of age (bottom), and bar graphs showing mean Western blot TH/b-actin ratios in SN at 16 weeks (K) and at 28 weeks of age. (L) Quantification of striatal (M) dopamine
and (N) DOPAC by HPLC at 16 weeks of age. Quantification of striatal (O) dopamine and (P) DOPAC by HPLC at 28 weeks of age in the modest pathology stage. Data are means ± SEM
of six to eight mice per group. ****P < 0.0001, ***P < 0.001, **P < 0.01, *P < 0.05. Data were analyzed by two-way ANOVA with Bonferroni’s multiple comparison test.
Western blotting of substantia nigra samples, we quantitated mTOR, experiments described above, MSDC-0160 treatment of the wild-
p-mTOR (Ser2448 and Ser2481), p70S6kinase, phosphorylated p70S6kinase type mice did not affect mTOR signaling proteins (fig. S7). Notably,
(Thr389), pS6 (Ser235/Ser236), S6, AKT, phosphorylated AKT (Thr308), En1+/− mice also had reduced LC3b/b-actin (Fig. 6, E, H, and K) and
regulated in development and DNA damage responses 1 (REDD1), p62/b-actin ratios (fig. S7G) relative to the wild-type mice, suggest-
LC3b, and p62 (Fig. 6, A to E, and fig. S7). These data show that all ing that the genetic model has a disturbance in autophagy. Treat-
of these pathways were perturbed in the En1+/− mice versus wild-type ment of the En1+/− mice with MSDC-0160 returned the amounts
animals (P value between 0.01 and 0.0001). Treatment with MSDC- of LC3b and p62 proteins to those seen in wild-type mice. Again,
0160 moved all of these changes toward the values observed in wild- there was no significant effect of MSDC-0160 treatment on the expres-
type mice. The changes included those in mTOR signaling—increases sion of these autophagy markers in wild-type mice (Fig. 6, E and K,
in p-mTOR Ser2448/mTOR/b-actin, phosphorylated p70S6kinase/ and fig. S7, C to G).
p70S6kinase/b-actin, pS6/S6/b-actin (Fig. 6, B to D, F, G, I, and J)— Together, the results indicate that modulation of MPC leads to an
and also REDD1/b-actin ratios (fig. S7, C and F). As in the MPTP immediate effect on mitochondrial metabolism associated with a later
Fig. 6. MSDC-0160 down-regulates mTOR signaling and restores autophagy in the En1+/− genetic mouse model of PD. (A) Representative Western blot illustrating the
expression of p-mTOR (Ser2448), mTOR, phosphorylated p70S6kinase (p-p70S6K) (Thr389), p70S6kinase, pS6 (Ser235/Ser236), S6, and LC3b in the SN. Bar graphs showing mean
Western blot p-mTOR/mTOR ratios relative to b-actin (B), mean Western blot p-p70S6K/p70S6K ratios relative to b-actin (C), mean Western blot pS6/S6 ratios relative to b-actin
(D), and mean Western blot LC3b/b-actin ratio (E). (F) Immunostaining for TH and p-mTOR (Ser2448) in SN; insets demonstrate overlap of TH and p-mTOR. (G) Immunostaining
for TH and pS6 (Ser235/Ser236) in the SN. (H) Immunostaining for TH and LC3b. DAPI, 4′,6-diamidino-2-phenylindole. Intensity of p-mTOR (Ser2448) (I), pS6 (Ser235/Ser236)
(J), and LC3b (K) in the TH-positive neurons [a.u. (arbitrary units)]. Scale bars, 10 mm. Data are means ± SEM of six to eight mice per group. ****P < 0.0001, ***P < 0.001,
**P < 0.01, *P < 0.05. Data were analyzed by two-way ANOVA with Bonferroni’s multiple comparison test.
reduction in the overactivation of the mTOR pathway. The data sug- in LPS-activated BV2 cells treated with MSDC-0160. A reduction in
gest that MPC modulation induces autophagy as part of the response mTOR activation caused by LPS was only observed after 24 hours of
that prevents neurodegeneration. incubation with MSDC-0160 (Fig. 7P and fig. S9, B and C). Subse-
quently, LPS-induced activation of S6 was also attenuated by
Role of inflammation in the effects of MPC modulation MSDC-0160 in BV2 cells (Fig. 7Q). However, no changes in the
Given that neuroinflammation is also considered a contributory factor AKT pathway (pAKT/AKT ratio) were detected at any time point
to PD pathogenesis and occurs in several PD animal models (60), we (fig. S9, B and C). This supports the notion that the anti-inflammatory
were curious whether modulation of MPC with MSDC-0160 treatment effects of modulating MPC are downstream of the immediate effects
would directly reduce inflammation. We found that MSDC-0160 re- on metabolism. Modulation of MPC had anti-inflammatory
duced glial fibrillary acidic protein (GFAP; an astrocyte marker), io- consequences in cellular and mouse models of inflammation and
nized calcium-binding adapter molecule 1 (Iba-1; a microglial PD. The earliest measured effects involved direct modulation of pyr-
marker), and inducible nitric oxide synthase (iNOS) expression in uvate metabolism and protection of oxidative metabolism followed by
the substantia nigra of MPTP-treated mice (Fig. 7, A to D, and fig. changes in the mTOR/AKT pathways (increases in mTOR phospho-
S8D). Similarly, in En1+/− mice, treatment with MSDC-0160 at the rylation while AKT activation was reduced).
modest pathology stage attenuated expression of Iba-1, GFAP, and
iNOS in the ventral midbrain, as assayed by immunoblot (Fig. 7, E
to G, and fig. S8F). In addition, immunohistochemical analysis for DISCUSSION
Fig. 7. MSDC-0160 attenuates inflammation in animal models and in mouse microglial cells. (A) Representative Western blot of Iba-1 and iNOS in the SN. Bar graphs
show mean Iba-1/b-actin (B) and mean iNOS/b-actin in SN (C). (D) Iba-1 immunostaining in SN. Bar graph shows number of Iba-1–positive cells in SN. (E) Representative blot of
Iba-1 and iNOS in SN. Bar graph shows mean Iba-1/b-actin (F) and mean iNOS/b-actin in SN (G). (H) Iba-1 immunostaining in SN. Bar graph shows number of Iba-1–positive
cells in SN. (I) Immunocytochemistry of Iba-1 and iNOS in primary mouse microglial cells. (J) Nitrite measurement and (K) immunocytochemistry of Iba-1 and NF-kB–p65 in BV2
mouse microglial cells. (L) Representative Western blot of NF-kB–p65 from cytosol and nucleus in BV2 cells. Concentration of interleukin-1b (IL-1b) (pg/ml) (M), tumor necrosis
factor–a (TNF-a) (pg/ml) (N), and IL-6 (pg/ml) (O) in BV2 cells. Immunocytochemistry of Iba-1 and p-mTOR (P) and Iba-1 and pS6 (Q) in BV2 cells. Scale bars, 50 mm (D, H, and I),
5 mm (K, P, and Q). (A to H) Data are means ± SEM of six to eight mice per group. (I to Q) Data are means ± SEM (n = 3 experiments). ****P < 0.0001, ***P < 0.001, **P < 0.01, *P <
0.05. Data were analyzed by two-way ANOVA with Bonferroni’s multiple comparison test.
to wild-type levels. We also observed increased expression of REDD1 (85, 86), and because mTOR inhibitors can inhibit release of inflam-
protein and inhibition of AKT phosphorylation at Thr308 in the En1 matory cytokines from activated macrophages (85, 86), we speculated
+/−
mice. These changes are all relevant to the pathophysiology of PD that MPC modulation would also mitigate mTOR activation in stimu-
because dopaminergic neurons in PD exhibit down-regulation of the lated microglia. In LPS-stimulated BV2 cells, exposure to MSDC-0160
Ser473- and Thr308-phosphorylated forms of AKT (67). REDD1, which caused a down-regulation of p-mTOR (Ser2448) and its target mole-
functions upstream of AKT, is induced during the neurodegenerative cule, pS6 (Fig. 7). As was the case for neurons, these effects were tem-
process (72). Modulation of MPC by MSDC-0160 reduced REDD1 porally downstream from the direct effects of mitochondrial
(fig. S7, C and F). Although this could be due to attenuation of metabolism in the microglia. These results are key because they
p70S6kinase activation, REDD1 was increased in response to multiple showed that MPC was engaged in both neurons and glial cells and
stresses, and it is likely that the upstream modulation of stress path- that down-regulating the mTOR signaling pathway was a consequence
ways is a component of the metabolic modulation. in both cell types. On the basis of our observations, we propose that
Part of the metabolic modulation by MSDC-0160 in all of the strategies that modulate MPC can have dual beneficial effects in PD,
models we examined included increased phosphorylation of AKT at by both improving autophagy in neurons and reducing microglia
Thr308. Although the precise mechanism underlying this change is not activation (fig. S10). We suggest that modulation of MPC by MSDC-
clear, reduction in endoplasmic reticulum stress might play a role (74). 0160 reduced the effects of PD-causing insults, whether a toxin, a mis-
Some of the effects we observed after modulation of MPC function folded protein (a-synuclein), or an En1+/− mutation. The direct interaction
were consistent with previous work using mTOR inhibitors (72). No- of MSDC-0160 with the MPC complex has recently been modeled,
of pioglitazone (45 mg, once daily). In response to MSDC-0160, hemo- of varying concentrations, the exact dose ingested by the worm cannot
globin A1c and fasting blood glucose in diabetic patients fell to levels be accurately calculated. Therefore, the maximum concentration that
similar to those of people taking pioglitazone, but fluid retention and had a neuroprotective effect was used in subsequent experiments to
other side effects were less prominent with MSDC-0160 treatment (41). ensure efficacy. About 50 worms were added per well, and the plate
Given the effects of MPC modulation by MSDC-0160 in several was incubated at 20°C for 48 hours. After 48 hours, worms were moved
different PD models in this study and its favorable safety profile in and allowed to recover on unseeded nematode growth medium plates
humans, we believe that targeting MPC in PD is warranted. MPC as for several minutes before being mounted on an agarose pad with 3 mM
a target is attractive because it affects multiple processes that are im- levamisole and analyzed microscopically. Each worm was scored for
plicated in PD pathogenesis, including autophagy and neuroinflam- the presence of GFP-fluorescent dopaminergic neurons in the anterior
mation, through actions on both neurons and glia. These findings of the worm (CEP and ADE neurons). A minimum of 25 worms were
should stimulate the development of other MPC modulators as analyzed for each condition in three independent trials.
potential disease-modifying therapeutic agents in PD and related
neurodegenerative disorders. Measurement of brain and plasma drug concentrations
C57BL/6J mice were orally dosed with MSDC-0160 (30 mg/kg)
suspended in 1% low-viscosity methylcellulose with 0.01% Tween
MATERIALS AND METHODS 80 in distilled water (10 ml/kg) and then euthanized 2 and 4 hours
Study design later. Plasma and whole-brain homogenates were extracted and
mice were placed daily inside the chamber for 10 min for two consec- plates and supplemented with Advanced Dulbecco’s modified Eagle’s
utive days. Open-field activities were recorded for 10-min test sessions. medium/F12 medium. At 24 hours before the assay, 10 mM MPP+ or
We evaluated a total of seven parameters: total distance traveled, mean 10 mM LPS was added to appropriate wells, and Seahorse probes were
speed, maximum speed, time frozen, time mobile, time immobile, and hydrated with Seahorse calibrant solution (pH 7.4). The day of the
head distance traveled. For the rotarod experiment, a speed of 18 rpm assay, medium was removed and replaced with Seahorse media (pH
for C57BL/6J mice and 10 rpm for En1+/− mice was used. Before testing, 7.4). One hour before the assay, cells were treated with 10 mM MSDC-
each mouse was trained on the rotarod for 5 min on three consecutive 0160 (posttreatment conditions). Cells were then washed twice in Sea-
days. Mice were given a 7- to 10-min rest between rotarod recording horse medium and calibrated in a 37°C non-CO2 incubator for 1 hour.
sessions. All behavior experiments were conducted in a blinded fashion. Oxygen consumption was measured twice basally. Injections of vehi-
cle, 10 mM MSDC, or 10 mM MPP+/LPS (pretreatment conditions)
Measurement of fluorescence intensity and densitometry were then added, and six oxygen consumption rate measurements
A total of three to four sections per brain containing the substantia of 3 min each were taken in a blinded manner. Measurements were
nigra and three mice per group were stained with antibodies directed normalized to 50,000 cells per well. A total of 15 wells per condition
against TH, p-mTOR, pS6, and LC3b. After immunofluorescence were measured, and three independent experiments for each cell line
staining, we took five 40× images from each section, blind-coded were performed.
them, and used the NIS-Elements AR 4.00.08 software (Nikon) to
quantify mean intensity of fluorescence of p-mTOR, pS6, LC3b, and Statistical analysis
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Cell culture
(ATCC, (43)). The LUHMES cells were plated and grown as described by (98 ). Briefly,
plastic cell culture flasks and multi-well plates were pre-coated with 50 μg/mL poly-L-
ornithine and 1 μg/mL fibronectin (Sigma-Aldrich, St. Louis, MO, USA). Cells were
grown at 37°C in a humidified 95% air, 5% CO2 atmosphere using proliferation medium
ng/mL recombinant basic fibroblast growth factor (R&D Systems, Minneapolis, MN,
USA). Proliferating cells were enzymatically dissociated with trypsin and differentiated
Aldrich) and 2 ng/mL recombinant human GDNF (R&D Systems). We used LUHMES
cells in all experiments at 5-6 d post-differentiation. First, LUHMES cells were pretreated
processed for immunocytochemistry. For the time course experiments, LUHMES cells
were treated with 10 μM MSDC-0160 for 2, 6, or 24 h. Cells were collected at these time
Primary mesencephalic neuronal cultures were prepared from the ventral mesencephalon
balanced salt solution (HBSS) and then dissociated in HBSS containing 0.25% trypsin-
EDTA for 20 min at 37°C. Cultures were maintained in Neurobasal medium with 50x B-
27 supplement, 500 mM L-glutamine, 100 IU/ml penicillin, and 100 μg/mL streptomycin
(all reagents were purchased from Invitrogen). The cells were maintained in a humidified
CO2 incubator (5% CO2 and 37°C) for 24 h. Five days post-culture, primary
immunocytochemistry.
BV2 cells were purchased from ICLC (Catalog number ATL03001) (61). The media in
which BV2 cells proliferate contained RPMI 1640 supplemented with 10% heat-
BV2 cells were plated at a density of 200 cells per mm2. After one day, FBS was
removed from the media and the cells were pretreated with 10 μM MSDC-0160. One
hour later, they were treated with 1 μg/mL lipopolysaccharide (LPS) (Escherichia coli
treatment, supernatant was collected for cytokine analysis or Griess assay and cells were
processed for immunocytochemistry. For the timecourse experiments, BV2 cells were
treated simultaneously with 10 μM MSDC-0160 and 1 μg/mL LPS for 2, 6, or 24 h. Cells
were collected at these time points and processed for western blotting.
For primary microglia isolation, we followed the procedure as described by (62). Briefly,
cortical tissues were dissected out from postnatal-day-3- to day-5-old mouse pups. Tissue
was dissociated using Miltenyi Biotec Neural Tissue Dissociation Kit (P, Miltenyi
Separator. Cells were then plated in 24-well dishes for treatments. Media for primary
penicillin and 50 μg/ml streptomycin. Primary microglial cells were plated at a density of
200 cells per mm2. After one day, FBS was removed from the media and the cells were
pretreated with 10 μM MSDC-0160. One hour later, they were treated with 1 μg/mL
LPS. After 24 h of LPS treatment, supernatant was collected for cytokine analysis or
Worm strains BY250 (GFP expression in dopaminergic neurons) and JVR203 (GFP + α-
grown in liquid culture (6 mg/mL OP50, 120 μM FUDR) treated or untreated with 100
μM MSDC-0160 for 12 d. After this time, worms were scored for neurodegeneration as
described above. RNAi experiments were carried following an identical paradigm using
strains JVR325 and JVR326, in which RNAi is only effective in neuronal cells. Bacterial
RNAi clones were obtained from the Ahringer RNAi library (Source Bioscience). NGM
plates were supplemented with 100 µg/mL carbenicillin and 1 mM IPTG. Bacterial
clones were grown overnight in LB with 100 µg/mL carbenicillin. The following day,
IPTG was added to a final concentration of 1 mM and the bacteria were allowed to grow
(shaking at 37 °C) for another hour. 50 µL of culture was seeded onto each plate. Worms
were synchronized and 100 L1s were added to each NGM RNAi plate and incubated at
20 °C in the dark for 48 h. L4s/early adults were washed from the plates and 50 worms
per well were incubated at 20 °C in M9 with RNAi bacteria (6 mg/mL), FUDR (120 uM),
IPTG (1 mM) and either MSDC-0160 or vehicle (methoxy cellulose). Freshly grown
RNAi bacteria in LB (with 0.1 mM IPTG and 100 μg/mL carbenicillin) was added to the
wells every 3 d. Worms were removed from liquid culture and scored for
cDNA was made from individual worms using the CellsDirectTM One-Step qRT-PCR
Kit (Invitrogen). qPCR was performed with Power SYBR green from Applied
Biosystems and cycled on an Applied Biosystems Step One Plus system. All reactions
were repeated multiple times: three technical replicates for each of two biological
Immunocytochemistry
The LUHMES cells, primary mesencephalic neurons, BV2 cells, or primary microglia
cells were fixed with 4% paraformaldehyde in 1X PBS for 20 min and processed for
immunocytochemistry. First, nonspecific sites were blocked with 0.2% bovine serum
albumin, 0.5% Triton X-100, and 0.05% Tween 20 in PBS for 1 h at room temperature.
Cells were then incubated with different primary antibodies: TH (1:1600, EMD
Millipore, Billerica, MA, USA); Tuj-1 (1:1000, Abcam, Cambridge, MA, USA); iNOS
(1:300, Santacruz, Dallas, TX, USA); Iba-1 (1:800, WAKO, Richmond, VA, USA); p-
mTOR (1:300, Cell Signaling, Danvers, MA, USA); p-S6 (1:1000, Cell Signaling,
Danvers, MA, USA) at 4°C overnight. Appropriate secondary antibodies (Alexa Fluor
488 or 594, Invitrogen, Carlsbad, CA, USA) were used followed by incubation with
DAPI to stain the nucleus. The coverslip-containing stained cells were washed twice with
PBS and mounted on slides. Cells were viewed under a NIKON Eclipse Ni-U
fluorescence microscope (Nikon, Melville, NY, USA); images were captured with a
Retiga Exi digital camera using NIS Elements AR 4.00.08 software (Nikon).
Cytokine analysis
Supernatant from treated BV2 cells was collected and stored at -80°C until
analysis. Analysis was performed using the V-PLEX Proinflammatory Panel 1 (mouse)
kit from Meso Scale Discovery (Rockville, MA, USA). Calibration solutions and buffers
were prepared as described by the kit. Supernatants were thawed and 25 μL of sample
was diluted 1:1 with 25 μL Diluent 41 from the kit. Sample was loaded onto the reading
plate and sealed before incubation at RT for 2 h with shaking. After 3 washes with 150
μL wash buffer, 25 μL of detection antibody solution was added to each well. Again, the
plate was sealed and incubated at RT for 2 h with shaking. An additional 3 washes were
performed followed by the addition of 150 μL 2X Read Buffer T. The plate was then read
Standards in triplicate were used for each plate. Standard mix was made up of 1 mL
media and 1 μL sodium nitrite and added to wells in volumes increasing by 5 μL from 0-
35 μL. Media was added to each well to bring volume up to a total of 100 μL. Sample
supernatant was added in triplicate to remaining wells in 100 μL amounts. Then, 100 μL
of Griess reagent (Sigma, USA) was added to each well and incubated at RT for 10
minutes on a rotator. Absorbance at 540 nm was detected in a Synergy NEO plate reader
Immunohistochemistry
Mice were anesthetized with sodium pentobarbital (130 mg/kg; Sigma) and perfused
(IHC), free-floating sections were washed with 0.1 M PBS (pH 7.4), incubated with 3%
H2O2 for 10 min to quench endogenous peroxidase activity, and were blocked for 1 h
with 10% normal goat serum and 0.25% Triton X-100. Next, the sections were incubated
WAKO); GFAP (1:1000, EMD Millipore). Then, the sections were incubated with
0.2% bovine serum albumin, 0.5% Triton X-100, and 0.05% Tween 20 in PBS for 1 h at
room temperature. Next, sections were incubated with different antibodies: TH (1:1500,
EMD Millipore); p-mTOR (1:200, Cell Signaling); p-S6 (1:800, Cell Signaling); LC3B
Appropriate secondary antibodies (Alexa Fluor 488 or 594, Invitrogen) were used
followed by incubation with DAPI to stain the nucleus. The sections were viewed under a
Nikon Eclipse Ni-U fluorescence microscope (Nikon); images were captured with a
Retiga Exi digital camera using NIS Elements AR 4.00.08 software (Nikon).
For the purpose of cell counting, we stained sections with 0.1% cresyl violet. Stained
cells were counted using unbiased sampling and blinded stereology. Following TH-DAB
immunostaining, the TH-ir neurons were counted using unbiased sampling and blinded
stereology as mentioned previously (51, 53). Briefly, the substantia nigra region was
outlined based on the Allen mouse brain atlas (Allen Institute, Seattle, WA, USA) using a
section of the substantia nigra using the optical fractionator probe in Stereo Investigator
software (MBF Bioscience, Williston, VT, USA). The parameters used include a 60× oil
objective, a counting frame size of 100 × 100, a sampling site of 140 × 140, a dissector
height of 18 μm, 2 μm guard zones, and the Schaffer second estimated co-efficient error
was less than 0.1. In addition, the Gunderson estimated coefficient error was less than
0.1. A total of 6 to 9 animals per group were used and 5 to 7 sections per animal were
4.00.08 software (Nikon) in a blinded manner. Briefly, striatal pictures were first taken at
2x magnification, then thresholded. After that, the optical density of fibers was counted
Western blotting
inhibitor mixture. Cell suspensions were sonicated after resuspension, whereas mouse
brain tissues were homogenized, sonicated, and then centrifuged at 14,000 x g for 45 min
at 4°C. Protein concentrations were estimated using a BCA kit (Thermo Scientific,
nitrocellulose membrane, and nonspecific binding sites were blocked by treating with
either Odyssey blocking buffer (LI-COR, Lincoln, NE, USA) or TBS with 5% bovine
(1:1000, Cell Signaling); p70S6 kinase (1:1000, Cell Signaling); phospho (Thr308) AKT
(1:1500, Cell signaling); S6 (1:1500, Cell signaling); LC3B (1:500, Cell signaling);
REDD1 (1:2000, Bethyl Laboratories, Montgomery, TX, USA); p62 (1:500, Abcam);
iNOS (1:300, Santa Cruz); GFAP (1:1000, EMD Millipore); Iba-1 (1:500, WAKO);
NFκB p65 (1:300, Santa Cruz); and β-actin (1:10,000, Sigma). Secondary IR-680-
conjugated anti-goat (1:10,000, donkey anti-goat, Molecular Probes, USA), IRDye 800
donkey anti-rabbit (1:10,000, Rockland, Pottstown, PA, USA) were used. New blot
stripping buffer (LI-COR, USA) was used to reprobe the membrane. Western blot images
were captured with a LI-COR Odyssey machine (LI-COR, USA). The western blot bands
were quantified using ImageJ software (National Institutes of Health, USA). An antibody
cells. Blue arrows show degenerating TH-ir dopaminergic neurons in the MPP+ treatment
group. C. elegans were synchronized and L1 larvae were placed in 96-well plates
containing OP50 bacteria in liquid culture (6 mg/mL) and MPP+ (0.75 mM) with MSDC-
0160 (1 μM, 10 μM and 100 μM) for 48 h. (B) GFP expressing dopaminergic neurons in
expression of different genes in C. elegans. Data are means ± SEM (n=3 experiments).
Supp
plementary Fig. 2. Mod
dulation of MPC
M improoves mitochoondrial funcction. Mice
dosin
ng. The plasm
ma (black do
otted lines; ng/mL)
n and bbrain homoggenates (blacck continuouus
duplicate) on rat brain mitochondria incubated with MitoXpress Xtra reagent (described
in the Materials and Methods section). The concentrations of MSDC-0160 shown were
added at the start of the reaction which contained 5 mM pyruvate. (C) The loss of oxygen
from the medium was measured over time as the increase in relative fluorescence (RFU).
Mean RFU is plotted at each time point. LOESS curves with 95% confidence ribbons are
plotted over top to show smoothed behavior over time. (D) Calculated changes in the
initial rate of oxygen consumption and SEM at the given concentration of MSDC-0160.
Data for are means ± SEM (n=3 experiments). (E) Measurement of oxygen consumption
MSDC-0160 and oxygen consumption was measured basally and for 30 minutes after
for each experimental group at each time point (n=3 experiments). LOESS curves with
95% confidence ribbons are plotted over top to show smoothed behavior over time.
Supplementary Fig. 3
actin in LUHMES cells. (B) Mean western blot phospho-mTOR/mTOR ratios relative to
β-actin. Data are means ± SEM (n=3 experiments). Data were analyzed by one-way
mouse model. (A) Treatment schedule of MPTP-injected mice with MSDC-0160 (Pre-
0160 pre-treatment schedule (D) Measurement of striatal MPP+ (ppb). (E) Treatment
mg/kg/day) by oral gavage two days post MPTP treatment (25 mg/kg/day) and continued
the treatment for another 7 days (Post-treatment of MSDC-0160). Four days after the last
MPTP injection, mice were tested for spontaneous open field behavioral activities. (F)
schedule (G) Distance traveled (cm), time mobile (sec), time immobile (sec) and time
freeze (sec). Data are means ± SEM of seven to ten mice per group. ****p < 0.0001,
***p < 0.001, **p < 0.01, *p < 0.05. Data were analyzed by one-way ANOVA with
Tukey’s multiple comparison test except (D) which was analyzed by unpaired student’s t-
test.
Supplementary Figure
F 5
Supp
plementary Fig. 5. MS
SDC-0160 improves
i b
behavioral activities in
n the En1++/−
mice. At the milld pathology 1+/- mice weere fed a dieet of chow fformulated tto
y stage, En1
immobile (sec), (D) Head distance traveled (cm). At the modest pathology stage, En1+/-
mice were fed a diet mixed with MSDC-0160 (30 mg/kg) starting at week 8 weeks and
were tested for motor functions at 16 weeks and 28 weeks. (E) Time freeze (sec), (F)
Time mobile (sec), (G) Time immobile (sec), (H) Head distance traveled (cm). Data are
means ± SEM of eight to twelve mice per group. ***p < 0.001, **p < 0.01, *p < 0.05,
o
p < 0.05-0.1. Data were analyzed using linear mixed-effects regression analysis false
En1+/− mice. (A) Stereological counting of cresyl violet (CV)-stained neurons in SN from
3W-28W group. (B) Stereological counting of CV-stained neurons in SN from 8W-16W
group. (C) Stereological counting of CV-stained neurons in SN from 8W-28W group. (D)
Representative western blot illustrating the expression of TH in striatum from 16W (top)
and 28W (bottom). (E) Bar graph showing mean western blot TH/β-actin ratios in ST at
16W. (F) Bar graph showing mean western blot TH/β-actin ratios in ST at 28W. Data are
means ± SEM of six to eight mice per group. ****p < 0.0001, ***p < 0.001, **p < 0.01,
*p < 0.05. Data were analyzed by two-way ANOVA with Bonferroni’s multiple
comparison test.
Supplementary Fig. 7
restores autophagy in the En1+/− mice. En1+/- mice were fed a diet formulated to
deliver MSDC-0160 (30 mg/kg) starting at week 8 (8W) and were euthanized at week 16
(16W). Substantia nigra (SN) tissues were processed for western blotting. (A)
Representative western blot for MPC-1 and MPC-2 in SN. (B) Immunohistochemistry of
mice. (C) Representative western blot illustrating the expression of phospho-mTOR (Ser
2481), mTOR, phospho-AKT (Thr 308), AKT, REDD1 and p62 in SN after treatment
with MSDC-0160 or control in WT and En1+/- mice. (D) Bar graph showing mean
western blot phospho-mTOR (Ser 2481)/mTOR ratios in SN relative to β-actin. (E) Bar
graph showing mean western blot phospho-AKT/AKT ratios in SN relative to β-actin. (F)
Bar graph showing mean western blot REDD1/β-actin ratios in SN at 16W. (G) Bar
graph showing mean western blot p62/β-actin ratios in SN at 16W. Scale bars, 5 μm. Data
are means ± SEM of six mice per group. ****p < 0.0001, ***p < 0.001, **p < 0.01, *p
< 0.05. Data were analyzed by two-way ANOVA with Bonferroni’s multiple comparison
test.
Supplementary Fig. 8
Supplementary Fig. 8. MSDC-0160 attenuates inflammation in BV2 cells and in vivo
animal models. (A) Representative western blot illustrating the expression of MPC-1 and
cells. (C) Western blotting of iNOS in BV2 cells. In the MPTP model, MPTP and
(D) Representative western blot illustrating the expression of GFAP in SN. Bar graph
showing mean western blot GFAP/β-actin ratios in SN. (E) DAB immunostaining of
Materials and Methods. (F) Representative western blot illustrating the expression of
GFAP in SN. Bar graph showing mean western blot GFAP/β-actin ratios in SN. (G)
DAB immunostaining of GFAP in SN. Scale bars, 5 μm. (A-C) Data are means ± SEM
(n=3 experiments). (D-G) Data are means ± SEM of six to eight mice per group. ****p <
0.0001, ***p < 0.001, **p < 0.01, *p < 0.05. Data were analyzed by two-way ANOVA
Supp
plementary Fig. 9. MSD
DC-0160 improves mitoochondrial ffunction and blocks
mTO
OR activatio
on in BV2 ceells. (A) Measurement oof oxygen consumption
n in BV2
consu
umption wass measured basally
b and for
f 30 minut es after injecction of vehiicle, MSDC--
MSD
DC-0160 in BV2
B cells. BV2 M LPS and 10 μM
B cells weere co-treateed with 10 μM
MSDC-0160 for 2, 6 or 24 h. Representative western blot of phospho-mTOR (Ser 2448),
mTOR and β-actin in BV2 cells. (C) Mean western blot phospho-mTOR/mTOR ratios
relative to β-actin. Data are means ± SEM (n=3 experiments). *p < 0.05. Data were
MSDC-0160 in glial cells and dopaminergic neurons. MSDC-0160 has a dual effect on