Assessment of Knowledge of Participants On Basic Molecular Biology Techniques After 5 Day Intensive Molecular Biology Training Workshops in Nigeria PDF

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Article

Assessment of Knowledge of Participants J. I. Yisau†


A. O. Adagbada†
on Basic Molecular Biology Techniques T. Bamidele†
M. Fowora†
After 5-Day Intensive Molecular Biology B. I. C. Brai†
O. Adebesin‡
Training Workshops in Nigeria M. Bamidele†
T. Fesobi†
F. O. Nwaokorie†
A. Ajayi§
S. I. Smith†*

From the †Molecular Biology and Biotechnology Division, Nigerian


Institute of Medical Research, Yaba, Lagos, Nigeria, ‡Department of
Cell Biology and Genetics, University of Lagos, Akoka, Lagos, Nigeria,
§Department of Microbiology, University of Lagos, Akoka, Lagos,
Nigeria

Abstract
The deployment of molecular biology techniques for diag- the workshops on knowledge and skill acquisition was
nosis and research in Nigeria is faced with a number of evaluated by pre- and post-tests which consisted of 25 mul-
challenges, including the cost of equipment and reagents tiple choice and other questions. Sixty-five participants
coupled with the dearth of personnel skilled in the proce- took part in the workshops. The mean knowledge of molec-
dures and handling of equipment. Short molecular biology ular biology as evaluated by the pre- and post-test assess-
training workshops were conducted at the Nigerian Insti- ments were 8.4 (95% CI 7.6–9.1) and 13.0 (95 CI 11.9–14.1),
tute of Medical Research (NIMR), to improve the knowl- respectively. The mean post-test score was significantly
edge and skills of laboratory personnel and academics in greater than the mean pre-test score (p < 0.0001). The five-
health, research, and educational facilities. Five-day molec- day molecular biology workshop significantly increased the
ular biology workshops were conducted annually between knowledge and skills of participants in molecular biology
2011 and 2014, with participants drawn from health, techniques. VC 2017 by The International Union of Biochem-
research facilities, and the academia. The courses con- istry and Molecular Biology, 00:000–000, 2017.
sisted of theoretical and practical sessions. The impact of

Keywords: Molecular biology; techniques; training; assessment

Introduction concerned with identifying the cause of a disease or precise


and consistent outcomes that are results of direct or indirect
The burden of communicable and noncommunicable dis-
actions, reactions and interactions between the cause of a
eases are great in developing countries, therefore accurate
disease and the host [1]. Prior to the advent of molecular
diagnosis is essential for effective treatment. Diagnosis is
biological methods for the detection and characterization of
microorganisms, the emphasis of basic biomedical science
Volume 00, Number 00, Month/Month 2017, Pages 00–00 was on studying diseases in patients and using diagnostic
*To whom correspondence should be addressed. Tel.: 108037058989. techniques such as isolation, culture, and microscopy [2, 3].
E-mail: stellaismith@yahoo.com. However with the development of molecular markers for
Received 30 August 2016; Revised 28 October 2016; Accepted 13 infectious agents such as bacteria, viruses, parasites, and
November 2016 for disease genes of noncommunicable diseases, molecular
Disclosure: The authors hereby declare that there is no conflict of
biology techniques have become attractive due to their high
interest.
Ethical approval: This article does not contain any study that required specificity, sensitivity, and turnaround time.
ethical approval. Molecular typing methods, such as restriction fragment
DOI 10.1002/bmb.21039 length polymorphism (RFLP), pulse-field gel electrophoresis
Published online 00 Month 2017 in Wiley Online Library (PFGE) and random amplified polymorphic DNA (RAPD) have
(wileyonlinelibrary.com) become increasingly useful in typing and discriminating

Biochemistry and Molecular Biology Education 1


Biochemistry and
Molecular Biology Education

Summary of educational background of participants


TABLE 1

No. of
students Degree Field of specialty Institution

15 PhD 2-Parasitology All University


5-Biochemistry
4-Biotechnology
3-Microbiology
1-Genetics
16 MSc 2-Biochemistry 1-Research institute
2-Biotechnology 1-Polytechnic
4-Microbiology 14-University
8-Genetics
7 MBBS/MBDS 1-Oral Pathology & Biology All, University Teaching Hospitals
1-Obsterics & Gynecology
1-Preventive Medicine
2-Chemical Pathology
2-Medical Microbiology
13 BMLS/FIMLT 2-Haematology 1-Polytechnic
2-Microbioloy 4-Private laboratory
1-Virology 2-Research Institute
2-Parasitology 6-University Teaching Hospitals
1 HND Science Laboratory Technology Polytechnic
13 PhD students 4-Biochemistry University
3- Cell Biology & Genetics
4-Microbiology
2-Molecular Genetics
Total 65

among pathogenic isolates, while PFGE is useful for the The aims of the workshop were:
assessment of interrelatedness of pathogens, RFLP is used
1. To train participants the art of molecular biology
for typing pathogens of the same species, while RAPD is use-
2. To impart on participants the requisite knowledge to
ful for the detection of genetic diversity in pathogens [4].
perform basic molecular biology techniques and their
Useful as these techniques are, their deployment in
underlying principles
Nigeria for disease diagnosis and biomedical research
3. To acquaint participants with the ethics of their chosen
presents with myriads of challenges which includes the
fields of biology
cost of equipment, reagents, and the skilled manpower to
4. To facilitate collaborations between participants and the
operate equipment for carrying out tests and accuracy in
interpreting results. The requirement for skilled manpow- Nigerian Institute of Medical Research (participant–par-
er is further heightened by the increase in number of ticipant interaction, NIMR–participants interaction)
postgraduate students carrying out researches that 5. To contribute to the effort to increase the critical mass
involves the use of molecular techniques. Studies have of molecular biologists in Nigeria
shown that training provides learners with hand-on expe-
rience and updates their knowledge, especially when
combined with work on ongoing research in research lab-
oratories [5]. Methodology
The molecular biology workshop organized by the Short courses in molecular biology were conducted to
Molecular Biology Division of the Nigerian Institute of Medi- improve the skills of laboratory and research personnel to
cal Research (NIMR), was designed to bridge the knowledge perform basic molecular biology techniques for disease
gap in molecular biology techniques in Nigeria. diagnosis as well as for research, with participants drawn

2
Course synopsis of theoretical and practical class sessions.
PLA 1

from both private and public health facilities, research genome of infectious agents, gel electrophoretic analysis of
institutions, and the academia as shown in Table 1. Five- amplicons obtained and gel scoring with regards to the
day molecular biology hands-on-training courses were con- positive identification of the infectious agent in the sample
ducted annually between 2011 and 2014. Two courses from which it was isolated and use of fluorescent in situ
were conducted in 2011 making a total of five hands-on- hybridization (FISH) of nucleic acid using rRNA probes for
training courses. The courses included theoretical and the diagnosis of Helicobacter pylori, the causative agent of
practical sessions. The theoretical session consisted of peptic ulcer disease.
classroom lectures in ethics and various aspects of molecu- The participants’ knowledge was evaluated at the
lar biology as they relate to specific disease agents that are beginning prior to the administration of the course and at
of medical importance in Nigeria (Plate 1). The practical the end after the administration of the course through pre-
session consisted of a hands-on active learning, in which and post-test questions that were the same. The evaluation
the participants were taken step wise through the proce- was based on a set of 25 questions which comprise both
dures of specific molecular biology techniques. The techni- multiple choice questions as well as problem solving cover-
ques covered during the workshops included, DNA extrac- ing both practical and theoretical aspects of the course
tion from Gram-positive and Gram-negative bacteria, (Plate 2). For the practical aspect, participants were to
nucleic acid quantification with nanodrop technology, plas- interpret the results of the electrophoretic analysis.
mid profiling, and restriction endonuclease analysis, poly- Data obtained were inputted into Microsoft Office Excel
merase chain reaction (PCR) of specific segments of the 2010, converted into a CSV (comma separated values) file

3
Biochemistry and
Molecular Biology Education

Format of questions that were administered for both pre and post-test evaluations.
PLA 2

format and imported into R Statistical software for Win- and completed both assessments over a period of 4 years
dows. Data analysis was done using R statistical software were analyzed. The mean pre-and post-test scores were 8.4
for Windows, version 3.1.1 (95% Cl: 7.6–9.1) and 13.0 (95% Cl: 11.9–14.1), respectively.
The distribution of the scores for the two categories of tests
is shown in Fig. 1. Table 2 shows the distribution of the raw
Results scores. There was a significant difference in the median pre-
Overall, a total of 65 pre- and post-test records of partici- and post-test scores (p < 0.001). Analysis of the professional
pants who participated in the molecular biology workshops affiliations of the participants showed that 60 of the

4
Distribution of the scores for the pre- and
TABLE 2 post-test assessments

Pretest Class marks Post-test


frequency frequency
19 0–6 7
39 7–12 24
7 13–20 29
0 21–25 5
Total 65 65
Boxplot of scores of participants in the multiple
FIG 1 choice question for the pre- and post-test assess- to their students with a better understanding following the
ment. The bold line through the boxes repre-
skills they acquired at the workshop. One of the aims of the
sents the median scores of each test category.
workshop was for the participants to also start up molecular
biology training in their localities with the capacity they
participants were academics, 9 of whom were from research
have acquired with support from the workshop organizers
institutions, and 51 from universities. The remaining five
where required. This is about to commence in a center
participants were medical laboratory scientist from specialist
where one of the participants who attended our courses is
hospitals. The participants represented 16 states of Nigeria.
to organize a training course in molecular biology.
Our result therefore show that knowledge and skills
Discussion were imparted during the course of the training and these
will provide teachers with the knowledge of laboratory tech-
The training undertaken during the molecular biology work-
niques to enable better learning by the students prior to
shops showed a significant difference in the post- and pre-
working in a molecular biology laboratory. It is also believed
test assessment, with higher scores in the post-test assess-
that with the wide attendance of the workshop participants
ment. Although the number of days did not vary, it was
from five geo-political zones out of six, many universities in
observed that a 5-day workshop would be sufficient to
Nigeria will be better positioned in the area of molecular
impart knowledge on the participants who demonstrated
biology techniques for research and development.
increasing interest and greater confidence each day through
the practical sessions which were complemented by class-
room sessions. Majority of the participants were drawn from Conclusion
the academia, this is due to the fact that contact persons of Following the effectiveness of molecular biology techniques
the organizers who were instrumental to awareness crea- workshop recorded in this study it would be imperative for
tion for the workshops were mainly from the academia. institutions to adapt this model in the training of personnel.
In an evaluation of the impact of molecular biology However, this can be optimized and remodeled to suit insti-
training on participants using a combination of online train- tutional purpose.
ing materials and hand-on laboratory experience, partici-
pants gave positive feedbacks on the impact of training on References
knowledge and skill acquisition [6]. This corroborates our [1] Sarkinfada, F. Auwal, I., Manu, A. Y. (2014) Applications of molecular diag-
study in which a combination of theoretical lectures and nostic techniques for infectious diseases. Bayero J. Pure Appl. Sci. 7, 37–45.
hand-on laboratory sessions also elicited improved perform- [2] Speers, D. J. (2006) Clinical applications of molecular biology for infec-
ances in an assessment tests from participants. In addition, tious diseases. Clin. Biochem. Rev. 27, 39–51.
[3] Weatherall, D. (1998) The future of molecular and cell biology in medical
it was observed that majority of lecturers who had given lec-
practice in the tropical countries. Br. Med. Bull. 54, 489–501.
tures on molecular biology techniques to students did not [4] Lin, T. H. Lin, H. Y., Zhang, F. (2014) Review on molecular typing meth-
have any practical experience, so the workshop availed ods of pathogens. Open J. Med. Microbiol. 4, 147–155. doi:10.4236/
them the opportunity of acquiring first-hand the requisite ojmm.2014.43017
practical molecular biology technique skill they needed for [5] National Science Foundation (2003). Research experience for undergrad-
uates (RUE) program description. https://mote.org/research/. . ./research-
better understanding of what they taught their students.
experiences-for- undergraduates-reu. . .
It is not known if a 2-week practical session would have [6] Boulay, R., Parisky, A., Campbell, C. (2010) Developing teachers under-
done better, but we are confident that some of the partici- standing of molecular biology: Building a foundation for students. ASCI-
pants who are lecturers would go on to pass the knowledge LITE Annu. Conf. 119–128.

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