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Field Survey of Major Tomato Growing Areas of Karnataka To Assess Fusarium Wilt Disease Incidence
Field Survey of Major Tomato Growing Areas of Karnataka To Assess Fusarium Wilt Disease Incidence
Field Survey of Major Tomato Growing Areas of Karnataka To Assess Fusarium Wilt Disease Incidence
3.1. Introduction
Tomatoes are susceptible to a large number of diseases. The diseases are region
specific, is because of the influence of climate and soil type. Fusarium wilt caused by Fusarium
oxysporum f. sp. lycopersici is a very destructive disease usually killing the infected plants.
Fusarium oxysporum infects tomato plants through the rootlets, invading the xylem and
eventually extending throughout the plant. The xylem of infected plants turns brown and this
discolouration can be seen in cross sections of the stem or by peeling away the outer layers to
reveal the xylem. It can often be traced through the entire plant to shoot tips and fruits. The
xylem at first may be discoloured only on one side, but eventually the entire circle of xylem as
seen in a section becomes brown. The browning of the vascular system is characteristic of the
disease and generally can be used for its identification (Cerkauskas, 2005). Once the fungus is
established in a field, it remains indefinitely and invades susceptible plants when conditions are
suitable. Fusarium is favoured by relatively high soil temperature. In general, F.oxysporum f. sp.
lycopersici attacks plants commonly at air and soil temperatures of 24°C to 32°C or 35°C
(Agrios, 2005, Mandal et al., 2009). The fungus can spread on contaminated seed or infected
plant parts and in infested soil (Agrios, 1988).
Field survey and estimation of crop loss in field conditions is very much important in
agriculture. It can provide information about the status and location of disease and economic
loss. Spores of fungi are one of the important means of dissemination and also used in the
identification and classification of the organism. It is well established that seed-borne fungi of
tomato could survive on the infected seeds for several days. The ability of the pathogen to
survive for long time in the diseased plant parts, soil and on alternate hosts in the absence of the
main host, determines the ability of the pathogen to perpetuate. As a soil inhabitant F. oxysporum
can survive extended periods in the absence of the host, mainly in the form of thick walled
chlamydospores. Indeed, once an area becomes infected with F. oxysporum, it usually remains so
indefinitely (Agrios, 1997).
As long as the plant is alive, the vascular wilt fungus remains strictly limited to the
xylem tissues and a few surrounding cells. Only when the infected plant is killed by the disease
does the fungus invade the parenchymatous tissue and sporulate profusely on the plant surface.
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Chapter 3: Field survey of major tomato growing areas of Karnataka to assess Fusarium wilt disease incidence
F. oxysporum thus occupies a highly specific ecological niche, shared by only a few other fungal
plant pathogens such as Verticillum dahlia and Ceratocystis ulmi (Agrios, 1997).
Quality of the seeds is very much important for seed purpose as well as consumption
point of view. Seed-borne fungi reduce the seed germination, seed viability, crop yield,
nutritional and market value. Infection of seeds by fungi can have a marked negative effect on
seed and nutritional qualities. For seed producers and farmers the seed quality is very much
important. In addition to that infected seeds that germinate will produce blighted seedlings,
which also further reduce planting value of seeds. Seed-borne fungi not only reduce the quality
and quantity of fruits but also infect and transmit the disease through seeds (Ellis et al.1975,
Elarosi 1993).
In the present study field survey followed by laboratory analysis was undertaken with the
following objectives.
OBJECTIVES
Field survey of major tomato growing areas of Karnataka to assess Fusarium wilt disease
incidence.
Collection of infected plant material, soil and seed samples from different places of
Karnataka.
Field survey was undertaken to collect the infected plant materials, soil and seed samples
and to assess the Fusarium wilt disease incidence in major tomato growing areas of Karnataka
such as Mysore, Hassan, Kolar, Bangalore Rural, Mandya, Ramanagara, Chikkaballapur and
Chikmagalur districts and their surrounding villages and also to assess the occurrence of seed-
borne disease fusarium wilt disease incidence and crop loss.
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Chapter 3: Field survey of major tomato growing areas of Karnataka to assess Fusarium wilt disease incidence
Tomato fields were observed, and in each field, five random microplots (25 x 25m2 area) with at
least 50 plants/microplot were examined for disease symptoms. Counts were taken for the total
and diseased plants in each microplot and the mean disease incidence for each tomato field was
calculated (Hassen 1982). Data were also collected for the cultivar designation, the seed
company that has released the cultivar. Total number of fields surveyed and the area of
cultivation of tomato in different districts surveyed were generated. Diseased samples like fruits,
leaf materials, stem, soil and seed sample were collected from the field survey. The stem sections
of diseased plants were observed for the vascular discoloration or browning prior to isolation of
the target pathogen from the diseased plants.
Tomato plants with typical wilt symptoms were collected from the fields. Infected stems
were cut with the help of knife to confirm for fusarium wilt in the tomato plants. The plant and
rhizosphere soil samples were collected from at least five different parts of each field. Around
5-10 g of rhizosphere soil was collected in separate plastic covers and sealed. The samples were
brought to the laboratory, stored under proper conditions (at temperature 4o C) and were used for
the isolation of the pathogen.
During field survey seed samples were collected from different agroclimatic regions of
Karnataka like Mysore, Hassan, Kolar, Bangalore Rural, Mandya, Ramanagara, Chikkaballapur
and Chikmagalur and their surrounding villages, research institutes and local seed agencies. The
collected samples were stored in polythene bags at temperature 26 + 2o C until further use.
3.2.5 Isolation of Fusarium oxysporum from infected plant and soil samples
Plant samples, root and stem tissues were washed under running tap water. Plant pieces
taken from the lower hypocotyls and upper taproot were surface sterilized in 1% NaOCl (sodium
hypo chlorite) solution for 1 to 2 min, rinsed twice in sterile distilled water and dried between
sterile filter papers. Pieces of surface disinfected tissues were plated on PDA (Potato Dextrose
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Chapter 3: Field survey of major tomato growing areas of Karnataka to assess Fusarium wilt disease incidence
Agar). The plates were incubated at room temperature for 7-10 days for the development of
typical white mycelial growth of Fusarium oxysporum f.sp. lycopersici and subcultured onto
PDA slants and maintained at 4 ± 2o C according to the procedure of Norhito et al., (2004).
Soil dilution technique was used for the isolation of F. oxysporum f.sp. lycopersici from
soil (Nash and Synder, 1962). One gram of soil was suspended in 9ml of 0.1% agar suspension
instead of plain water. One ml aliquot of 0.1% agar suspension from soil dilution was poured on
petridishes containing PDA media and the suspension was spread on agar surface by rotating the
dishes. Plates were incubated at room temperature for 7-10 days for the development of typical
white mycelial growth of F. oxysporum f.sp. lycopersici and subcultured onto PDA slants and
maintained at 4 ± 2o C.
The seeds were surface sterilized in 1% NaOCl for one to two minutes, and were
subjected to standard blotter method (SBM). Four hundred seeds of tomato were pla ted (25
seeds/plate) on wet blotters and were incubated for 7 days at 27+1o C under 12/12h alternate
cycles of near ultraviolet (NUV) and darkness (ISTA 2005). On the 8 th day of incubation, seeds
were thoroughly examined using stereobinocular microscope, and the incidence of different
fungi were recorded and tabulated. The percent incidence of seed-borne Fusarium oxysporum
and other fungal pathogens was calculated by using formula,
Sand- corn meal medium was prepared in the proportion 95:5 in order to get maximum inoculum
of the fungus. About 400g of Sand- corn meal medium was taken in 1000ml flasks and watered
to 20 percent of its weight and sterilized. The pure culture of F. oxysporum was inoculated
separately to the flask under aseptic condition and incubated at 27±1ºC for 15 days. The flasks
were shaken on alternate days to get uniform growth. The culture so obtained was used for
preparing sick soil for further studies.
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Chapter 3: Field survey of major tomato growing areas of Karnataka to assess Fusarium wilt disease incidence
3.2.8 Pathogenecity
The isolated F.oxysporum was confirmed by observing the conidial morphology under
compound microscope. Further confirmation of the pathogen was done by pathogenecity test
under greenhouse conditions.
3.3 Results
Systemic survey for Fusarium wilt incidence was carried out in different tomato growing
districts of Karnataka such as Mysore, Mandya, Hassan, Chikmagalur, Bangalore Rural,
Ramanagara, Kolar and Chikkaballapur during Kharif season of 2006–2009 (Fig.3.1), (Table 3.1
and 3.2).
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Chapter 3: Field survey of major tomato growing areas of Karnataka to assess Fusarium wilt disease incidence
3.3.3 Incidence of different seed -borne fungal pathogens in tomato seeds on SBM
The incidence of different seed borne fungi like Alternaria alternata, A. solani,
Aspergillus flavus, A. niger, Curvularia lunata, Drechslera halodes, Fusarium moniliforme,
F. oxysporum and F. solani recorded in thirty different tomato seed samples collected during
field survey are given in the Table 3.4.
The percent incidence of seed borne fungi was calculated for ten susceptible seed
samples of tomato (Pusa Ruby, Rasmi, Arka Vishal, Vaishali, Madanpalli, Sultan seeds,
Mahadhan Sugam, Punjab Choara, Namdhari seeds and PKM-1,) and is given in the (Table3.3).
In tomato different fungi like Alternaria alternata, A. solani, Aspergillus flavus, A. niger,
Curvularia lunata, Drechslera halodes, Fusarium oxysporum, F. moniliforme and F.solani
recorded was 8.4%, 15.6%, 10.0%, 10.5%, 4.1%, 4.7%, 28.5%, 7.85% and 9.1% respectively.
Among all the fungi recorded F.oxysporum was expressed at very high incidence and it was 32%
in PKM-1 variety (Table 3.5).
3.3.5 Isolation of Fusarium oxysporum from infected plant and soil samples
Fungal pathogen was isolated from infected plant and soil samples as detailed in material and
methods and the identity confirmed by observing the conidial morphology under compound
microscope as F. oxysporum f.sp. lycopersici. The fungus F. oxysporum produced microconidia,
microconidia and chlamydospores. Microconidia were abundant, hyaline, continuous or 1-
septate, ovoid to ovate. Microconidia were scarce, often lacking and variable, 3 septate or rarely
4–5 septate measured 19.1 – 21.2 x 3.2 – 4.5 μm. Chlamydospores were hyaline, usually
vacuolated and spherical, measured 7 – 10 μm in diameter. The culture of fungus on potato
dextrose agar was whitish to pink coloured mycelium (Fig 3.3). Further confirmation of the
pathogen was done by pathogenecity test under greenhouse conditions. Reidentification and
confirmation of the pathogen was done from National Fungal Culture Collection of India
(NFCCI), Agharkar Research Institute, Pune.
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Chapter 3: Field survey of major tomato growing areas of Karnataka to assess Fusarium wilt disease incidence
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Chapter 3: Field survey of major tomato growing areas of Karnataka to assess Fusarium wilt disease incidence
Figure. 3.1. Karnataka state map showing diffe rent districts and the location of the current
studies (coloured with red, blue and green).
Field survey for the Fusarium wilt incidence in tomato was carried out for three
consecutive seasons (2006-2009).
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Chapter 3: Field survey of major tomato growing areas of Karnataka to assess Fusarium wilt disease incidence
Figure. 3.2. (i). Tomato fields infected with Fusarium wilt near, (a) Kolar,
(b) Mandya, (ii). Healthy tomato fields near, (c) Mysore, (d) Chikkaballapur.
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Chapter 3: Field survey of major tomato growing areas of Karnataka to assess Fusarium wilt disease incidence
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Chapter 3: Field survey of major tomato growing areas of Karnataka to assess Fusarium wilt disease incidence
1-No symptoms.
2-Slight chlorosis, wilting or stunting of the plant.
3-Moderate chlorosis, wilting or stunting of the plant.
4-Severe chlorosis, wilting or stunting of the plant.
5-Death of the plant.
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Chapter 3: Field survey of major tomato growing areas of Karnataka to assess Fusarium wilt disease incidence
Table 3.1. Details of selected districts of Karnataka (locations) in the present study
Sl. No. Districts Soil type Area under tomato Total production
Location cultivation (tonnes)
(hectares)
1 Mysore Red sandy loam 2455 40137
2 Mandya Red sandy loam 2539 13146
3 Hassan Red sandy loam 807 10347
4 Chikmagalur Red sandy loam 2243 33824
5 Bangalore Rural Red lomy 1354 23064
6 Ramanagara, Red lomy 1550 20165
7 Kolar Red lomy & Laterite 6362 41893
8 Chikkaballapur Red lomy & Laterite 2345 35624
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Chapter 3: Field survey of major tomato growing areas of Karnataka to assess Fusarium wilt disease incidence
Table 3.2. Tomato seed samples collected from different parts of Karnataka during field
survey.
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Chapter 3: Field survey of major tomato growing areas of Karnataka to assess Fusarium wilt disease incidence
Table 3.3 Assessment of Fusarium wilt disease incidence in tomato growing areas of
different districts of Karnataka (2006-2009).
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Chapter 3: Field survey of major tomato growing areas of Karnataka to assess Fusarium wilt disease incidence
Table 3.4 Seed-borne fungal disease incidences in different tomato variety on SBM
(standard blotter method)
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Chapter 3: Field survey of major tomato growing areas of Karnataka to assess Fusarium wilt disease incidence
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Chapter 3: Field survey of major tomato growing areas of Karnataka to assess Fusarium wilt disease incidence
3.4 Discussion
Fungal diseases of tomato lead to drastic reduction of fruit yield. In recent years, it has
assumed serious proportions in Karnataka and several complaints have been reported from the
farmers regarding the improper control of the disease by the recommended management
practices made at present. Sudarshan Rao (1975) stated that, survey and surveillance form the
basis for any successful plant protection strategy. Successful plant protection depends upon early
detection of the disease incidence followed by timely adoption and application of preventive
measures.
In the present studies the disease was found to be prevalent in all the districts. Based on
the field survey in major tomato growing areas of Karnataka it was evident that the incidence of
Fusarium wilt diseases was highly prevalent. The fusarium wilt pathogen was commonly
associated to diseased plants and seeds as well as in soil samples taken of the affected fields. The
high incidence of Fusarium wilt indicated that the Fusarium wilt is a recurrent problem in the
Karnataka state and all popular varieties appeared to be susceptible to the disease. The incidence
of the disease could in fact be higher as no attempts were made in the isolation of the pathogen
from plants without symptoms. Assessment of the presence of Fusarium wilt pathogen in plants
merely by scoring of disease symptoms often gives only a superficial picture of invasive
properties of this organism. The consequence of symptomless invasion of tomato plants by
Fusarium oxysporum is without doubt, an important means for the survival of the pathogen
resulting in the potential for infestation of soil and other plants.
Severe losses due to the disease have been observed in Assam, Andhra Pradesh, Punjab,
Haryana and Delhi (Kapoor, 1988). Fusarium wilt had been the most devastating disease
resulting in 10 to 50% crop losses around the world (Lukyanenko, 1991). Therefore, an
investigation was carried out on various aspects of the pathogens and diseases both under
laboratory and greenhouse conditions.
Symptoms produced are varied. In the field, the characteristic symptoms of wilt observed
included stunted growth, yellowing and drooping of older leaves proceeding upwa rds, and
complete or partial wilting in some cases. Infections in young plants resulted in sudden wilting.
When the affected stems were cut open at the collar region prominent dark brown to slightly
pinkish discoloration of vascular bundles was observed in most of the cases and the most
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Chapter 3: Field survey of major tomato growing areas of Karnataka to assess Fusarium wilt disease incidence
The disease is reported to occur more on warm sandy soil and also whenever tomato is
grown with other vegetables (Kapoor, 1988). Fusarium wilt in general, disease of warm soils
being most destructive around 28°C (Agrios, 1997). Serious losses due to wilt disease in tomato
were reported in Florida (Jones et al., 1991).
Standard blotter method to check the incidence of different seed-borne fungi in different
seed samples of tomato was carried out. In tomato different fungi like Alternaria alternata, A.
solani, Aspergillus flavus, A. niger, Curvularia lunata, Drechslera halodes, Fusarium
moniliforme, F. oxysporum and F. solani were recorded and F. oxysporum was expressed at
very high incidence (28%). Removal of externally seed borne fungi by surface sterilization
provides a chance for the seed-borne fungi to appear in greater number. There are reports that
F.oxysporum remained viable in dried pulp fragment on the surface of seeds for many years. The
isolation of F.oxysporum from greater number of seed samples after surface sterilization would
suggest that F.oxysporum was also internally seed borne. The quantitative and qualitative
variation in the incidence of seed-borne fungi can be attributed to the weather conditions like
temperature, rainfall and relative humidity. The ability of the pathogens to infect and colonize
the seed is dependent primarily on the environmental conditions like rainfall, temperature etc.
(Besri 1978; Frisullo et al., 1986).
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