Professional Documents
Culture Documents
Pathology KKM
Pathology KKM
Pathology KKM
10(BP)
DEPARTMENTAL POLICY
OF
PATHOLOGY SERVICES
SEPTEMBER 2010
Publisher Identity:
Medical Development Division
Ministry of Health Malaysia
Level 5, Block E 1, Parcel E
62590 PUTRAJAYA
MALAYSIA
ISBN 978-983-3433-67-4
9 789833 433674
FOREWORD
ARTICLES
1 General Policy
2 Disciplines
4 Appendix
The universal need to convert an expanding mass of raw laboratory data into
accessible, cost effective and clinically usable information has continued to be
a matter of increasing significance throughout the medical community. The
need for expeditious and unencumbered information has been confirmed in
the daily practice of clinical Pathology and also in discussions with physicians.
Laboratory tests are part of most patient-physician encounters and contribute
greatly to the selection of additional diagnostic procedures. They often
precede the history and physical examination.
The department has developed from a simple municipal set up into a modern
multidisciplinary centre providing state of the art diagnostic, teaching and
research services in Malaysia. Many of our clinical laboratories have been
accredited by NATA, adopting Joint Committee International (JCI) standards
internationally and the Department of Standards Malaysia (DSM), locally.
1.1 Services
e) Hospitals planning for new tests shall notify and get approval
from the State Pathologist and the Heads of the relevant
Disciplines.
1.2 Organization
1.2.2 Statistics
h) Post graduate and post basic training for all categories of staff
shall be in accordance with service needs.
1.4.1 Pre-analytical
d) Sample collection
Specimen collection shall follow the guidelines provided by
the Pathology Department or any standard text book.
e) Sample Transport
Whenever possible, automated sample delivery e.g. via
1.4.2 Analytical
a) All methods shall be validated prior to use and all data record
are kept.
1.5 Finance
1.7 Safety
d) All tests that deal with numbers and required monitoring of IQC
and EQA are to be performed in the chemical Pathology laboratory
that can do such discipline-specific interpretation or if this is not
possible one Biochemist shall be put in charge and be trained in the
specifics for verification of results.
3.1.1 General
3.1.2 Procurement
by the MOH.
complied with.
i)
shall be determined as part of the commissioning process
before it can be used for service.
3.1.3 Maintenance
3.1.4 Training
3.2.1 Personnel
b) Head of Department
ii. All specialist hospitals shall have at least one SO for each
discipline appropriate for the workload.
iii. All state hospital shall have at least one SO for each
discipline in Pathology. The number shall follow the
norm/ workload.
3.3 Training
3.3.2 Specific
3.4.1 QA
3.5.1 General
a) All hospital laboratories shall have LIS suitable for the scope
of their service. The LIS could be standing alone LIS or part
of HIS. The LIS should be able to communicate with each
other using relevant open standard protocols.
3.5.2 Security
3.5.3 Environment
The system shall be placed in a secure environment and
appropriately maintained. It shall have appropriate
uninterruptible power supply and should be readily accessible
to appropriate fire-fighting equipment.
3.6.5 Training
Training shall be provided to all staff concerned inclusive of staff
of packaging centre, drivers, transporters and phlebotomists to
comply with safety standards.
Level.
9. List of Contributors.
14 21 20 7 75
K. Tinggi Ranau
Kulai
* Pusat Darah Negara, unlike other hospitals or institutions, has no hospital bed.
** PKKN, although not yet officially de-gazetted as a leprosarium, has been amalgamated
into Hospital Sungai Buluh for administrative matte.
Bintulu Tampin
T.Merah Mukah
Gua Musang
1. Air Sampling 3 3 3 3
2. Anaerobic culture & ID 3 3 3 3
3. Body fluid (C&S) 3 3 3 3
4. Blood (C&S) : Aerobic &
Anaerobic 3 3 3 3 3
5. CSF (C&S) 3 3 3 3 3
6. Environmental screen 3 3 3 3 3
7. Stool (C&S) 3 3 3 3 3
8. Genital (C&S) 3 3 3 3 3
9. Peritoneal fluid (C&S) 3 3 3 3 3
10. Pus/Swab (C&S) 3 3 3 3 3
11. Respiratory (C&S) 3 3 3 3 3
TB
12. AFB direct smear 3 3 3 3 3 3
13. Culture 3 3 3
14. ID 3 3
15. Sensitivity 3 3
16. Mycobacterium Genomic 3 3
Detection
17. Tissue 3 3 3 3 3
18. Urine (C&S) 3 3 3 3 3
19. Sterility A-Test 3 3 3 3 3
20. Sterility (C&S) 3 3 3 3 3
BACTERIOLOGY SEROLOGY
21. Chlamydia trachomatis IF 3 3 3 3
22. Clostridium. diffifile toxin 3 3 3 3
23. Chlamydia pneumonie IgG/lgM 3 3
24. Chlamydia tracomatis lgG/lgM 3 3
25. Chlamydia psittacii lgG/lgM 3 3
26. Chlamydia pneumonia/ 3 3
trachomatis/psittacii/IF
27. Coxiella serology 3
28. Brucella serology 3
29. CSF VDRL 3
30. CSF Bacterial antigen 3 3 3 3 3
31. Indirect Immunoperoxidase
(IIP) Rickettsial 3 3 3
32. Leptospira lgM 3 3 3
33. Legionella (IF) 3 3
34. Legionella urinary antigen 3 3
35. Mycoplasma pneumoniae lgM
36. TPHA 3 3 3 3
37. RPR 3 3 3 3 3
IMMUNOLOGY
A. INFECTIOUS DISEASES SEROLOGY
38. ASOT 3 3 3 3
39. Interferon gamma assays for
latent tuberculosis diagnosis 3 3 3
B. AUTOIMMUNITY
Connective tissue disease 3 3
40. Antinuclear antibody : ELISA
screening 3 3 3 3
41. ANA dilution/titre 3 3 3
42. Anti-ds DNA antibody IF
screening 3 3 3 3 3
43. Anti-ds DNA titre/quantitation 3 3 3 3 3
Director General
Director Medical
Development Division
National Pathology
Advisor
Head of
Department
Administrative
Staff e.g Personal
Assistant, Clerk, Asst Specific Dicipline
Information Officer Visiting Pathologist
Specialist
Medical
Officer
Scientific
Officer
Asst. Medical
Lab Technologist
Healthcare
Assistant
Head of
Department
Non-technical staff
* Staff Nurse (5) * PRO (3)
* Clerk (4) * IT Officer (1)
* Attendant (10) * Asst IT Officer (2)
Hispathologist Haemathologist
(5) (5)
Hispathologist
(5)
Haemathology Transfusion
Division Division
Medical Officer Medical Officer Medical Officer Medical Officer Medical Officer
(4) (2) (2) (1) (1)
Lab Manager
MO/Scientific
Scientific Officer Scientific Officer Scientific Officer Scientific Officer Scientific Officer Officer (1)
(2) (14) (3) (6) (6)
Quality Manager
Scientific Officer
MLT (15) MLT (18) MLT (7) MLT (25) MLT (25) SMLT (1)
Head of
Department
Non-technical staff
* Staff Nurse (3) * PRO (1)
* Clerk (2) * IT Officer (1)
* Attendant (5) * Asst IT Officer (1)
Medical Officer
(2)
Medical Officer
(4)
Scientific Officer Scientific Officer Scientific Officer Scientific Officer Scientific Officer
(2) (6) (2) (4) (1)
Quality Manager
Scientific Officer
SMLT (1)
MLT (8) MLT (8) MLT (5) MLT (12) MLT (7)
Head of
Department
Clinical Pathologist (1)
Non-technical staff
* Attendant (3)
Medical Officer
(2)
Haemathology Transfusion
Division Division
Head of
Department
Scientific Officer (1)
Non-technical staff
* Attendant (1)
1. CHEMICAL PATOLOGY
Hospital Category
Non Minor Major Regional/
No.
State
Specialist Specialist Specialist Referral
Test
Capacity No Capacity No Capacity No Capacity No Capacity No
A. PREANALYTICAL
1. Pneumatic tube 3 3 3
2. Preanalytical Automated System 3 3
3. Auto sampler Sorter 3
B. ROUTINE CLINICAL CHEMISTRY
1. Chemistry analyzer with ISE 700 t/hr 1200 t/h 1200 t/h 2400 t / hr 2400 thr
2. Blood Gas analyzer 80 t/hr units 80 t/hr units 80 t/hr units 80 t/hr units 80 t/hr
units
3. Fully automated Urine analyzer w 3 3
microscopic
4. Automated Urine analyzer strip 3 3 3
(manual microscopic)
5. Osmometer 3 3 3 3 3
6. HbA1c-HPLC automated with
auto-sampler 50
test /hr 50 test /hr 50 test /hr 100 test /hr 100 test/ hr
7. Analyser for Microalbumin 3 3 3 3 3
C. HORMONES/ TUMOUR MARKERS
1. Immunoassay analyzer
(routine hormones) 50-100 t/hr 200 t/hr 200 t/hr 200 t/hr 200 t/hr
2. Immunoassay analyzer 200 t/hr
(extended hormones)
3. Gamma counter (for Hormone 3
test RIA method)
4. HPLC (Catecholamine) 3
D. IEM 3
1. GCMS (Organicacid)
2. HPLC (amino acids) 3
3. HPLC (purine & pyrimidine) 3
4. Spectrophotometer 3
5. Tandem mass spectrophometry 3
A. CLINICAL TOXICOLOGY
1. Chemistry Analyzer without ISE 3 3 3 3
2. Immunoassay (TDM) analyzer 200 t/hr 200 t/hr 200 t/hr
3. GCMS 3
4. LC MS/MS 3
5. HPLC 3
6. Horizontal Shaker medium speed 3
7. Centrifuge floor stand for 50 cc 3
type (Drug)
8. Sample Vacuum Concentrator
9. Autoclave floor model 3
10. Automated SPE System 3
11. Electrolyte analyzer with lithium 3
12. Atomic Absorption 3
Spectrophotometer
F. PROTEIN AND PROTEONOMIC
1. 1D Electrophoresis Hosp Ampang 3
2. 2D electrophoresis 3
3. Image Scanner
4. 2DPlatinum Analyser 3
5. Spot picker 3
6. Gel Digester & Spotter 3
7. Automated Spot Handler 3
8. HPLC 3
9. 2D Gel Imaging Sys & Protein 3
spot picker
10. Gel Documentation 3
11. Hydrasys Electrophoresis 3
12. Microarray Analyser 3
13. Gel electrophoresis 3
14. Immunochemiluminescence
Analyser 3
15. Macintosh computer software
16. LC/MS/MS( Q-TOF) 3
17. Ampliprep
18. Refrigerated centrifuge 3
19. Amplificator Analyser &Datastation 3
20. Radiograph developer 3
21. UV spectrophotometer 3
22. Flurorescene scanner 3
23. Light Cycle 3
24. Automatic stainer 3
25. Capillary electrophoresis 3
26. Pure LC automated Nucleic acid
purufication system 3
27. Automated sample homogeniser
system 3
28. Biological Safety Cabinnette
Class II 3
29. Agarose gel electrophoresis system 3
30. Gene Micro/Nanoarray 3
31. Automated nucleic acid extraction 3
32. Centrifuge high speed with rotor 3
33. Incubator shaker 3
G. COMMMON (Pre / Analiyical / Post )
1. Bench Top Centrifuge
2. Microcentrifuge
3. Refrigerator
4. Freezer (-70)
5. Freezer -20
6. Refrigerator Medical 1000L
7. Refrigerator 480 L
8. Fume Hood
9. Balance analytical 200 G, 0.01g
10. Balance weighing 1200g
Hospital Category
Non Minor Major State Regional/
Specialist Specialist Specialist Referral
No. Test
Capacity No Capacity No Capacity No Capacity No Capacity No
A. BACTERIOLOGY CULTURE
1. Microscope - binocular 3 3 3 3 3
2. - inverted 3 3 3 3
3. Slide heater 3 3 3 3 3
4. Incubator – CO2 3 3
5. - 370C 3 3 3 3
6. Centrifuge 3 3 3 3 3
7. Fridges 3 3 3 3
8. Safety Cabinet Class II 3 3 3 3 3
9. Autoclave 3 3 3 3 3
10. Cytospin 3 3 3 3
11. Water bath 3 3 3 3
12. Water deioniser 3 3 3 3
13. Automated urine analyzer/ 3 3 3 3
quantitative
14. Automated blood Culture system 3 3 3 3
15. Automated bacte identification & 3 3
susceptibility
16. Automated media dispenser 3 3
17. Automated media preparation 3 3
system
18. Immunofluorescene microscope 3 3
19. Air sampler 3 3
20. Automated Antibiotic reader 3 3
21. Anaerobic culture workstation 3 3 3 3
22. Automated glassware washer 3 3
B. TB LAB
23. Incubator for – CO2 3 3
24. Incubator - 370C 3 3
25. Centrifuge 3 3
26. Fridge 3 3 3
27. Microscope binocular 3 3 3 3 3
28. Safety Cabinet 3 3 3 3 3
29. TB culture & identification system 3 3
C. BACTERIOLOGY SEROLOGY
30. Safety cabinet class II 3 3 3 3
31. Centrifuge 3 3 3 3
32. Fridge 3 3 3 3
33. Freezer-20C 3 3 3 3
34. -70C
35. Automated enzyme immunoassay 3 3 3 3
system
36. EIA reader 3 3 3 3
37. EIA washer 3 3 3 3
38. Shaker/Rotator 3 3 3 3
39. Microscope 3 3 3 3
40. Water bath 3 3 3 3
D. VIROLOGY
41. Automated enzyme immunoassay 3 3 3 3
system
42. Centrifuge 3 3 3 3
43. Fridge 3 3 3 3
44. Freezer – 20 º C 3 3 3 3
45. - 70 º C 3 3 3 3
46. Safety cabinet class II 3 3 3 3
47. Binocular microscope 3 3 3 3
C. IMMUNOLOGY
48. Safety cabinet class II 3 3 3
49. Centrifuge 3 3 3
50. Fridge 3 3 3
51. Freezer - 20C 3 3 3
52. - 70C 3 3 3
53. Automated enzyme immunoassay
system 3 3 3
54. EIA reader 3 3 3
55. EIA washer 3 3 3
56. Shaker 3 3 3
57. Microscope-binocular 3 3 3
F. MYCOLOGY
58. Mycology blood system 3 3 3
59. Safety cabinet class II 3 3 3
60. Fridge 3 3 3
61. Microscope - binocular 3 3 3
62. - inverted 3 3 3
63. Incubator - CO2 3 3 3
64. - 37C 3 3 3
65. - 40C
66. Centrifuge
G. PARASITOLOGY
67. Safety cabinet class II 3 3 3 3
68. Fridge 3 3 3 3 3
69. Incubator - CO2 3 3 3 3
70 - 37C 3 3 3 3
71. Safety cabinet class II 3 3 3 3
72. Fridge 3 3 3 3
73. Incubator - CO2 3 3 3 3
74. - 37C 3 3 3 3
75. Water bath 3 3 3 3
76. Water bath 3 3 3 3 3
77. Microscope - binocular 3 3 3 3 3
78. Inverted 3 3 3 3 3
H. MOLECULAR LAB
79. Thermal Cycler Machine 3
80. Electrophoretic set 3
81. Gel Imaging System 3
82. Dry block 3
83. BSC II 3
84. Spectrophotometer 3
85. Refrigerated Centrifuge 3
86. Microcentrifuge 3
87. Micropipettor 3
88. Vortex 3
89. Fridge 3
90. Ice Flaker Machine 3
91. Freezer -30 3
92. Freezer -80 3
93. Automated PCR System 3
I. LAB FOR UNKNOWN ORGANISM
94 BSC II 3
95 Microscope binocular 3
96 Incubator 37oC 3
97 Incubator CO2 3
98 Bench top Centrifuge 3
99 Freezer -20oC 3
100 Refrigerator 3
101 Autoclave 3
102 Bacticinerator 3
103 Automated EIA Analyser 3
104. UV microscope 3
105. Rotater 3
0
2. Haematology Analyser. High range min 0 0 CBC>100/hr 1 CBC>100/hr 1
22 parameters.
6. Haemoglobinometer:
For Antenatal and Haj pilgrimage
2 2 2 2 2
checkup
1 1 1 1 1
10.Centrifuge,Bench top,refrigerated
C. THALASSEMIA / HAEMOGLOBINOPATHY
1. Automated Hb electrophoresis Fully auto 10 Fully auto 10
0 0 0 samples 1 samples 1
2. HPLC 0
0
0 2 2
3. Water bath 0 0 0 1 1
D. HAEMOLYTIC ANAEMIAS
1. UV box (G6PD Screening) 1 1 1 1 1
2. Water bath
1 1 1 1 1
3. UV Visible Spectrophotometer (RBC 0 0 0 (HKL only) 1 (HKL only) 1
Enzyme Assay)
0 0 0 (HKL only) 1 (HKL only) 1
4. Block Heater(RBC Enzyme Assay)
E. HEMOSTASIS / THROMBOSIS
1. Regionalised service for Extended
Basic Haemostasis & Thrombosis in
PP,SAJB,KT,QE,Kuching only)
A. HEMATO-ONCOLOGY
Regionalised service in HKL,KB,SAJB,PP,QE & Kuching
6 Flowcytometer 0 0 0
1 each 1 each
7 Freezer,-80 C o 0 0 0
1 each 1 each
8 Refrigerator, laboratory 0 0 0
1 each 1 each
10 Centrifuge 0 0 0
1 each 1 each
A. DEMOGRAPHY
A. DEMOGRAPHY
1 Computer 1 1 2
3 Acroprinter 1 1 2
B. GROSSING SECTION
B. GROSSING SECTION
1 Grossing station 1 2 3
4 Transcription/Dictation system 1 2 3
5 Grossing set 1 4 6
8 Photography system 1 1 1
9 Computer 1 1 2
C. TISSUE PROCESSING
C. TISSUE SECTION
PROCESSING SECTION
1 Tissue processor (low/medium 2
capacity)
2 Tissue processor (high capacity) 2 3
D. D.
EMBEDDING SECTION
EMBEDDING SECTION
1 Tissue embedding centre 2 2 3
E. SECTIONING SECTION
E. SECTIONING SECTION
1 Freezer 0ºC 1 1 1
2 Cold plate 2 2 3
3 Microtome 2 3 4
F. F.
STAINING
STAINING
AND AND
F. STAINING MOUNTING
ANDMOUNTING
SECTION
MOUNTING SECTION
SECTION
1 Fume cabinet 1 1 1
6 Binocular microscope 1 1 1
7 Cryocut 1 1 1
A. A.
IMMUNOFLUORENCE AND AND
IMMUNOFLUORENCE HISTOCHEMICAL ENZYMEENZYME
HISTOCHEMICAL
Trinocular dissecting microscope(renal,
1 1 1 1
rectal and muscle bx)
2 Cryocut 1 1 2
3 Ultra low freezer(-80C) 1
4 Freezer(-30C) 1 1 1
5 2 door chiller for reagents 1 1 2
B. B.
SPECIAL STAIN
SPECIAL AND AND
STAIN IMMUNOHISTOCHEMISTRY
IMMUNOHISTOCHEMISTRY
1 Analytical measuring balance 1 1 1
3 Binocular microscope 1 1 1
8 pH meter 1 1 1
11 Water distiller 1 1 1
C. C.
DIAGNOSTIC
DIAGNOSTIC
1 Binocular microscope( 1 for each MO 3 4 6
according to workload norm)
2 Double viewer microscope 3 4 5
3 Multiviewer microscope 1 2 3
4 Trinocular dissecting microscope with CCD
attachment with software and hardware( 1 for 5 8 11
each pathologist according to workload norm)
5 Computer (for reporting 1 each reporting
doctor) 8 12 16
LIST OF CONTRIBUTORS
Dr Arni Talib
Consultant Pathologist
Hospital Kuala Lumpur
Dr Azizon Othman
Consultant Pathologist
Hospital Tuanku Jaafar, Seremban
Dr Liza Dat
Consultant Pathologist
Hospital Tuanku Fauziah, Kangar
Dr Hakimah Mahsin
Consultant Pathologist
Hospital Pulau Pinang
Dr Jamilah Baharom
Consultant Pathologist
Hospital Pulau Pinang
Dr Kreetharan Ayudurai
Consultant Pathologist
Hospital Sultanah Aminah, J. Bahru
Datin Dr S. Ganeswarie
Consultant Pathologist
Hospital Sultanah Aminah, J. Bahru
Dr Hj Zakaria Jusoh
Consultant Pathologist
Hospital Sultanah Nur Zahirah, Kuala Terengganu
En Sofian Abdullah
Hospital Selayang, Selangor
Dr Zuraihan Dahari
Senior Assistant Director
Clinical Support Services Unit
Medical Development Division
http://www.moh.gov.my
ISBN 978-983-3433-67-4
9 789833 433674