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Lecture 3 - Protein Adsorption Part 1 PDF
Lecture 3 - Protein Adsorption Part 1 PDF
Models of Adsorption
Introduction to the various ways adsorption is modeled
Langmuir Isotherm
Simplified model of adsorption for reversible binding assumption
Quantifying Adsorption
Defining the mathematical terms used in adsorption
Vroman Effect
Introduction to modeling competitive adsorption
Protein Adsorption
Binding of proteins to biomaterial surface via chemically/energetically favorable
interactions determined by their respective structures.
Reversible Binding:
⚬ Modeled by first order reaction kinetics (linear dependency between product & reactant)
⚬ Assumption #1: Only one protein binds per site
⚬ Assumption #2: Dilute solution of protein
⚬ Assumption #3: equilibrium condition is met when rate of adsorption = rate of desorption
■ Reversibility condition
𝒌𝒂 𝑷 𝑺 = 𝒌𝒅 [𝑷𝑺]
[𝑷𝑺] 𝑲[𝑷]
𝒗= =
𝑺 + [𝑷𝑺] 𝟏 + 𝑲[𝑷]
Quantification of Binding
Dissociation (KD):
⚬ inverse of affinity. Likelihood of the loss of
interaction
⚬ [P] < KD means few occupied surfaces
⚬ [P] = KD means ½ of sites occupied
⚬ [P] > KD means majority of sites occupied
Scatchard Plot:
⚬ Linearization of occupied fraction plot
⚬ Slope of line is Ka
⚬ Y-intercept is measure of total available
surface sites ([S]0)
[𝑷𝑺]
= 𝑲( 𝑺 𝟎 − 𝑷𝑺 )
[𝑷]𝟎
Quantification of Binding
Effective Area (Aeff):
⚬ How much surface area a single protein
occupies.
⚬ Dictates total number of available surface
sites
⚬ Depends on surface concentration (Γ)
𝑴𝒑𝒓𝒐𝒕𝒆𝒊𝒏
𝑨𝒆𝒇𝒇 =
𝑵 ∗ 𝚪𝒎𝒂𝒙
𝟏
𝑨𝒆𝒇𝒇 =
[𝑺]𝟎
Factors of Competition:
1) Size | Larger proteins bind more favorably
because they can form more surface interactions
2) Charge Distribution | Patterning of electrostatic
(hydrophilic) and uncharged (hydrophobic) regions
that match that of material surface
- isoelectric point | charged residues appear
uncharged @ a certain pH
(look @ pKa vs physiological pH)
3) Stability | Proteins prone to unfolding can then
cover more surface sites
Vroman Effect
• Competitive absorption usually results in the
displacement of some (or all) species of a lower
affinity binder with that of higher affinity
Layer Formation
• After a monolayer has formed, new proteins
must either compete for the displacement of
adsorbed proteins
• OR find sites of favorable interactions on the
monolayer to begin a new layer
⚬ Protein-protein interactions
Availability is Diffusion Limited
• All adsorption processes are governed by transport phenomena
⚬ Local availability for things to bind and at what condition will steady state be reached
• BUT they are especially important when considering competitive adsorption/the Vroman effect.
• Four major transport phenomena:
⚬ Diffusion | Thermal Convection | Flow | Coupled Transport (multiple processes)
Dij = diffusion due to interactions between ith & jth species (=/= Dji) Dij = Maxwell-Stefan Diffusion Coeffient (not same as Fick & Dij = Dji )
Ji = flux of species i 𝛁𝑻,𝑷 𝝁𝒊 = gradient of chemical potential @ isotherm & isobare
n = total number of species (allowing for n-1 interactions) ui = diffusive velocity of ith species
• Maxwell-Stefan is more accurate and robust, BUT more difficult to obtain diffusion coefficient
• Not a lot of published tabulated data as it is
• Approximation formulas exist to handle systems behind ternary mixtures
• Maxwell-Stefan considers friction and external driving forces
• “Classical” Fick can be derived from Maxwell
• Reliability of model caps around ternary systems
Examples will be covered in guided worksheets this week
AND in class over Zoom next week.