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Bicarbonate-Based Cultivation of Dunaliella Salina For Enhancing Carbon Utilization PDF
Bicarbonate-Based Cultivation of Dunaliella Salina For Enhancing Carbon Utilization PDF
Bicarbonate-Based Cultivation of Dunaliella Salina For Enhancing Carbon Utilization PDF
PII: S0960-8524(17)30490-X
DOI: http://dx.doi.org/10.1016/j.biortech.2017.04.009
Reference: BITE 17904
Please cite this article as: Kim, G-Y., Heo, J., Kim, H-S., Han, J-I., Bicarbonate-based Cultivation of Dunaliella
salina for Enhancing Carbon Utilization Efficiency, Bioresource Technology (2017), doi: http://dx.doi.org/10.1016/
j.biortech.2017.04.009
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1 Bicarbonate-based Cultivation of Dunaliella salina for Enhancing Carbon Utilization
2 Efficiency
a
5 Department of Civil and Environmental Engineering, KAIST, 373-1 Guseong-dong,
b
7 Cell Factory Research Center, Korea Research Institute of Bioscience and Biotechnology
c
9 Biotechnology, University of Science and Technology (UST), Daejeon 305-350, Republic
10 of Korea
*
11 Corresponding author: Jong-In Han (E-mail address: hanj2@kaist.ac.kr; Tel: +82-42-350-
13
14 Abstract
17 L-1 of sodium bicarbonate was found to well support the growth of Dunaliella salina,
18 showing 2.84-fold higher specific growth rate than a bicarbonate-free control. This
19 bicarbonate-fed cultivation also could yield biomass productivity similar to that of CO2-based
20 system as long as pH was controlled. While the supplied CO2, because of its being a gas, was
21 mostly lost and only 3.59% of it was used for biomass synthesis, bicarbonate was effectively
22 incorporated into the biomass with 91.40% of carbon utilization efficiency. This study
23 showed that the bicarbonate-based microalgae cultivation is indeed possible, and can even
26
27 Keywords
28 CO2 capture and utilization (CCU); microalgae; Dunaliella salina; sodium bicarbonate
30
31 1. Introduction
32 Ever-increasing concerns about the climate change due to CO2 have strongly
33 demanded ways to reduce the greenhouse gas emission and even use it in a beneficial way.
34 These approaches are collectively referred to as carbon capture and utilization (CCU)
36 Microalgae can assimilate CO2 through photosynthesis, and its biomass can then be
38 chemicals (González-Delgado and Kafarov, 2011). There have been a good many studies that
39 microalgae were cultivated in such a way that consumes CO2 contained in flue gases,
40 focusing on the aspect of CCU. Despite the theoretical feasibility of this technology, however,
41 there are three critical obstacles: low quality of flue gas, high cost for CO2 transportation, and
43 The flue gas contains toxic components, such as SOX and NOX; thus, its direct
44 application to algal culture may inhibit the algal growth (Negoro et al., 1991). The need for
45 transportation adds another burden. Land available for algae cultivation around power plants
46 is generally limited and hence CO2 has to be transported in a highly pressurized form with a
47 typical pressure of 150 atm (Chi et al., 2011). Besides, the gaseous CO2, when supplied to
48 algae pond, is utilized by microalgae only to a very limited degree on account of its low water
49 solubility. All these happen due to gaseous being of CO2; therefore, it is our hypothesis that
53 can be a good candidate for the alternative carbon source. In fact, our research group has been
56 compression and can be transported through a simple water pipe line. The high water
57 solubility of NaHCO3 (9.21% (w/w) at 25˚C) also leads to high carbon utilization efficiency,
58 and all these make the overall process simple and easy to control.
59 Up until now, however, only a few studies have demonstrated that bicarbonate ion
60 indeed has a positive effect on microalgal cell growth, and they have mainly focused on the
61 basic mechanism at the genetic level (Chi et al., 2011; Moroney and Ynalvez, 2007; Price et
62 al., 2008; Wang et al., 2011). Among microbes known to be able to grow on bicarbonate ion,
63 prokaryotic cyanobacteria have been mainly studied because of their superior genetic
64 manipulability to eukaryotic algae, and works on eukaryotic microalgae were scarce (Ma et
65 al., 2014).
66 The objective of this study was, therefore, to explore the ability of eukaryotic green
67 algae to utilize NaHCO3 as its major carbon source from an engineering point of view. To this
68 end, Dunaliella salina, which is a halophilic green microalgae often found in marine habitats,
69 was selected as a model eukaryotic algae species. Dunaliella salina is known to be the richest
70 natural source of carotenoid, beta carotene, and this property makes it possible to capture CO2
71 in an economically beneficial way (Borowitzka, 1990).
73 when combined with these seawater algal species. Seawater, which has a salinity value of 35
74 g salt per kg seawater, has the following carbonate species concentrations at pH 8.1 and 25˚C:
75 [CO2] = 10.4 µmol kg-1, [HCO3-] = 1818 µmol kg-1, and [CO32-] = 272 µmol kg-1 with pK1
76 and pK2 values of 5.86 and 8.92, respectively (Zeebe and Wolf-Gladrow, 2001). This
77 condition that is low in CO2 but high in bicarbonate is expected to be beneficial to the
79 The effect of bicarbonate on the growth of Dunaliella sp. was investigated, and
80 optimal culture conditions, such as NaHCO3 concentration, culture temperature, and light
85
88 Dunaliella salina JDS 001 (KT778301.1) was isolated from the salt pond in the
89 western sea, Korea, and it was maintained in Modified Johnsons (MJ) medium with 2 M of
90 NaCl (Borowitzka, 1988). To check whether this Dunaliella species is able to grow with
92 to 30 g L-1 of NaHCO3 were supplemented into the MJ medium. For this experiment, a new
93 equipment named PhotoBiobox was employed (Heo et al., 2015). This high-throughput
94 device made it possible to cultivate microalgae in a 96-well plate with a wide range of
95 temperature and light intensity. In each of 96 wells, 200 μL of the Dunaliella culture, which
96 had 0.1 of initial optical density at 680 nm (OD680), was added, and the plate was sealed with
97 an air permeable membrane (Breathe-Easy, Diversified Biotech). Dunaliella sp. was then
98 cultivated for 2-3 days with each chosen condition in triplicate until it reached stationary
99 phase. OD680 was measured with a microplate reader (Sunrise, Tecan) three times a day, and
100 the specific growth rate (SGR) of Dunaliella sp. was calculated only at the exponential
101 growth phase by the equation (1) where X1 and X2 represent OD680 on day t1 and t2,
102 respectively.
103 (1)
104 Temperature and light intensity were maintained as 25˚C and 340 μE m-2 s-1 (based on
105 the surface of membrane), respectively, and the same experiment was repeated by using the
106 Dunaliella cells, which had been cultured in the first batch, as an inoculum. New MJ media,
107 which contained each concentration of NaHCO3, were supplemented and each well served as
108 an inoculum to make initial OD680 of 0.1 with all other conditions remained the same.
109
111 Optimum temperature and light intensity for bicarbonate-based Dunaliella cultivation
112 were obtained with 5 g L-1 of NaHCO3 and compared to those obtained from CO2-based
113 cultivation. 5% (v/v) of CO2 was supplied at a steady flow, and 5 g L-1 of NaHCO3 was
114 included in the MJ medium at the outset only. In the PhotoBiobox, 96 different combinations
115 were simultaneously tested: 12 different levels of temperature, from 19 to 31˚C, and 8 levels
116 for light intensity, from 85 to 500 μE m-2 s-1. Dunaliella sp., which had been acclimated to
117 each of carbon sources and stored at 25˚C with 30 μE m-2 s-1 of light intensity under the LED
118 fluorescent light, was used as an inoculum. It was then cultivated for two days, and optimal
119 conditions were determined on the basis of its SGR.
120
122 The effectiveness of aqueous bicarbonate as a substitute carbon source was confirmed
123 in a larger flask scale. For that, bicarbonate-based cultivation with 5 g L-1 of NaHCO3 and
124 CO2-based cultivation with 2% (v/v) of CO2 were comparatively analyzed. In the
125 PhotoBiobox experiment, CO2 was provided through an air-permeable membrane after being
126 filled in a closed compartment. In the flask cultivation, however, CO2 was directly bubbled
127 into the culture medium, so it was supplied with a reduced amount of 2% (v/v) rather than 5%
128 (v/v).
129 Dunaliella cells were inoculated into 250 mL baffled culture flasks containing 220 mL
131 medium (for CO2-based cultivation) in such a way that initial OD680 values fell into 0.2.
132 Cultivations were proceeded with the operational conditions of shaking at 160 rpm,
133 temperature at 30ºC, 280 μE m-2 s-1 of light intensity at the surface of culture medium, and 0.2
134 vvm of air or 2% (v/v) CO2 supply. All cultivations were done in triplicate, and growth was
136 This experiment was repeated with pH controlled and with all the other conditions
137 remained unchanged. The pH was adjusted as 8 by adding hydrochloric acid on a daily basis.
138
140 The cell number of Dunaliella sp. was counted by using an automated cell counter
141 (Cellometer, Nexcelom). Ash free dry weight (AFDW) was measured by Zhu’s method with
143 Lichtenthaler’s method (Lichtenthaler and Wellburn, 1983; Zhu and Lee, 1997). Carbon
144 utilization efficiency was defined as the percentage of fixed carbon in total input carbon.
145
146 (2)
147
148 In the bicarbonate-based cultivation, total input carbon was defined as the sum of (1)
149 a reduced amount of total inorganic carbon (TIC), which was obtained by total organic
150 carbon analyzer (Multi N/C 3100, Analytikjena), and (2) an amount of carbon introduced
151 through air bubbling. For the CO2-based cultivation, the total input carbon was calculated
152 based on an amount of carbon supplied in the form of CO2 throughout the cultivation.
153 In order to estimate the mass of fixed carbon, amounts of carbon contained in final
154 microalgae biomass were obtained by an element analyzer (FLASH 2000 series, Thermo
155 Scientific), and the carbon content was multiplied by AFDW. The detailed calculation process
157
160 Dunaliella sp. was able to well utilize NaHCO3 as a carbon source, and their response
162 Dunaliella sp. also increased especially at a low concentration range. Specifically, 0.34 day-1
163 of initial SGR was raised to 0.70 day-1 (2.06 times) in the presence of 5 g L-1 of NaHCO3 (Fig.
164 1). In addition, in the second round of batch cultivation, when the Dunaliella cells had
165 already exposed and adapted to bicarbonate, SGRs were further increased by 2.84 times
167 In general, when microalgae are exposed to a high level of sodium, sodium ions are
168 accumulated to an excessive degree, leading to the inactivation of some enzymes and
169 eventually to the growth inhibition (Sudhir and Murthy, 2004). It is this reason that a majority
170 of microalgae species, even some marine species, typically have a peak SGR at a certain
171 concentration of NaHCO3, and above it, their growth is inhibited (White et al., 2013). On the
172 contrary, Dunaliella sp. behaved differently. It reached a stationary state at 5 g L-1, and SGRs
173 were maintained even above it. This was attributable to the fact that Dunaliella sp., which
174 had been isolated from saltworks where sea salts are produced through evaporating the
175 seawater, potentially had developed resistance to high sodium conditions. While a
176 conventional culture medium for Dunaliella sp. contains only 0.043 g L-1 of NaHCO3
177 (Borowitzka, 1988), the NaHCO3 concentration for the optimal growth was found to be 5 g L-
1
178 ; this concentration was used in all subsequent experiments.
179 SGR with respect to NaHCO3 concentration could be also nicely depicted by the
180 nonlinear fitting of Monod equation (Fig. 1), and its kinetic parameters were determined as
181 maximum SGR (µmax) of 1.11 day-1 and half saturation constant (KS) of 0.42 g L-1.
182
184 Optimum temperature and light intensity were also investigated for both bicarbonate-
185 based and CO2-based Dunaliella cultivations, and the optimum SGRs were compared to see
187 The highest SGRs were found to be not much different regardless of the carbon
188 source: 0.97 day-1 with bicarbonate and 0.95 day-1 with CO2. Conditions to support the best
189 growth, however, were somewhat different: 30.2ºC and 375 μE m-2 s-1 of light intensity with
190 bicarbonate and 27.9ºC and 425 μE m-2 s-1 with CO2 (Fig. 2).
191 Contrary to a widely accepted notion that microalgae prefer CO2 to bicarbonate
192 (Moroney and Somanchi, 1999), Dunaliella sp. responded similarly to both of the two.
193 Dunaliella sp., which had long been exposed to its natural habitat of the seawater, where CO2
194 is scarce but bicarbonate is rich ([CO2] : [HCO3-] : [CO32-] ≈ 0.5% : 86.5%: 13%) (Zeebe and
195 Wolf-Gladrow, 2001), is likely to be adapted to the bicarbonate, similarly to CO2. This ability
196 of Dunaliella sp. to utilize bicarbonate as a carbon source, even with comparable SGR to the
197 conventional CO2-based cultivation, has high applicability. Gas-free microalgae cultivation
198 yet with equivalent biomass productivity has a great many operational advantages.
199 With CO2, however, Dunaliella sp. could have high SGRs (> 0.7 day-1) in wider
200 range of temperature and light intensity than bicarbonate: in about half of conditions tested
201 for the CO2-based cultivation, but in only about a quarter for the bicarbonate. This implied
202 that it is critical to maintain a certain controlled condition so as to obtain the high biomass
204
206 To confirm the experimental results obtained from the PhotoBiobox, Dunaliella sp.
207 was cultivated with a larger-scaled reactor. In the 200 μL-scaled test, the instantaneous SGRs
208 were similar in both bicarbonate-based and CO2-based cultivations, but it was not the case in
210 The bicarbonate-based cultivation was found to be inferior to the CO2-based one; the
211 final OD680 value under the CO2 condition was almost twice as high as that under the
212 bicarbonate condition (Fig. 3). This retarded growth in the bicarbonate condition appeared to
213 be related with a sudden rise in pH. While pH in the CO2 condition was maintained around 7-
214 8, it was escalated rapidly to 10 in three days in the bicarbonate condition. It was from this
215 third day that the OD values started to show significant difference. This pH rise was because
216 OH– ions were accumulated in the process of metabolizing bicarbonate (Chi et al., 2014).
217 Bicarbonate must be first converted into CO2 to be fixed by Rubisco, but in so doing H+ is
218 consumed and OH– is left in the algal cell according to this equilibrium equation, H+ +
219 HCO3– ⇌ CO2 + H2O. This OH– is then neutralized by H+ uptake from the extracellular
220 environment; thus, the reduction of H+ in the culture medium unavoidably increases the pH.
221 To prove this hypothesis, the growth of Dunaliella sp. with bicarbonate was re-
222 examined, but in this time with pH controlled. The pH was adjusted to 8 instead of 7-7.5,
223 which was the pH range in the CO2 condition. Considering the aim of this study to cultivate
224 microalgae with bicarbonate, pH 8, at which bicarbonate is abundant according to the pKa
225 values of carbonate species, was the most desirable condition. In addition, to lower the pH by
226 using chemical leads to an increase in overall production cost. Taking these reasons together,
227 the pH 8 was determined to be the best value in terms of both efficiency and economic
228 feasibility.
229 As expected, almost the same amount of OD680 and cell number were achievable at
230 the end of cultivation in both conditions (Fig. 4). The AFDW also supported this with 3.17 ±
231 0.15 g L-1 in the bicarbonate condition and 3.47 ± 0.25 g L-1 in the CO2 condition. Although it
232 has been a rather unshakable belief that CO2 is superior and irreplaceable for the effective
233 microalgae cultivation, our results strongly suggested that bicarbonate also can produce
235 This bicarbonate ion had positive effects not only on the biomass productivity of
236 Dunaliella sp. but also on the productivity of target value chemicals, carotenoids, showing
237 the highest carotenoids concentration in the bicarbonate condition, 20.43 ± 2.84 µg mL-1 (Fig.
238 5). This value was significantly higher than that of a similar previous study, 7.10 ± 0.08 µg
239 mL-1 with 12.6 g L-1 of NaHCO3 (Srinivasan et al., 2015). Usually, Dunaliella sp. has a
240 separated induction stage, particularly for the accumulation of carotenoids, and this induction
241 process is carried out by several stress conditions, such as nitrogen starvation, high salinity,
242 or high temperature (Pisal and Lele, 2005). Further in-depth research may prove that
243 NaHCO3-based stress can indeed be an easy and effective induction method, and even more
245
247 The most important factor of microalgae cultivation as a CO2 utilization technology is
248 how much carbon is converted into algal biomass. To assess it, carbon utilization efficiency
249 was estimated on the basis of the 9th day when Dunaliella cells were still actively dividing.
250 In the bicarbonate condition, TIC decreased from 533.5 mg L-1 to 152.6 mg L-1 with
251 the growth of Dunaliella sp. on the 9th day, and Dunaliella sp. grown with bicarbonate
252 contained 49.59 ± 0.42% of carbon and with CO2 51.06 ± 0.67% (Table 1), suggesting that
253 the form of utilized carbon was not a determining factor of carbon contents. The amounts of
254 fixed carbon were obtained by multiplying these carbon contents by AFDW of Dunaliella sp.:
255 1.85 g L-1 in the bicarbonate condition and 2.22 g L-1 in the CO2 condition.
256 The overall carbon utilization efficiency in the bicarbonate-based cultivation was
257 found to be 91.40%, and in the CO2 cultivation 3.59%. It is typical that open-culture systems
258 are not effective in terms of CO2 utilization. CO2 supplied in a gaseous form easily escapes
259 from the culture medium, rather than being captured and utilized by the cell, due to its poor
260 mass transfer efficiency. It is also because the medium is generally neutral and the reactors
261 are too shallow to keep the gas in the medium long enough. All these consequently result in a
262 high CO2 outgassing rate and low CO2 fixation efficiency of only 10-30% (E. W. Becker,
263 1994; Weissman and Goebel, 1985). In this study, this inherent inefficiency was further
264 exaggerated as 3.59% on account of smallness and shallowness of the bioreactor. Even taking
265 it into consideration, however, this huge discrepancy (3.59% and 91.40%) indicated that most
266 of CO2, which was continuously supplied throughout the cultivation just as in the
267 conventional system, was lost to the atmosphere. Besides, the solubility of CO2 decreases
268 with increasing salinity (Hangx, 2005). The exceedingly high salinity (2 M NaCl) of MJ
269 medium might also play a role in the high outgassing rate. With bicarbonate, however, such
270 an uncontrollable loss did not take place because of its being ions in water; thus, it appeared
271 to be clear that carbon utilization efficiency is much higher when bicarbonate is used as a
272 carbon source. This also implies that substantially more is required with the gaseous form of
273 CO2 than with an ionic form of bicarbonate to yield the same biomass productivity.
274 It is true that the bicarbonate-based culture system also has several weaknesses; for
275 instance, high cost for bicarbonate supply and the necessity of pH control. This bicarbonate-
276 based algae cultivation, however, can serve as a truly eco-friendly way of producing algae
277 biomass when an innovative technology for CO2 mineralization, such as electrochemical
279
280 4. Conclusions
281 This study demonstrated that NaHCO3 can be a carbon source for microalgae
282 cultivation, and it can be equally effective to the gaseous CO2. The proposed bicarbonate-
284 continuous supply of CO2 gas, even with its cost ignored, is rather a hassle. The gas-free
285 microalgae cultivation makes the overall bio-process easier to control. Furthermore, it has a
286 significant merit from a CCU perspective as well. To realize the potential of this ideal way of
287 supplying carbon, however, economic methods of producing bicarbonate and controlling pH
289
291
292 Acknowledgements
293 This research was supported by the Advanced Biomass R&D Center (ABC) through
294 the National Research Foundation of Korea (NRF) funded by the Ministry of Science, ICT &
295 Future Planning (NRF-2011-0031348) and by Korea Electric Power Corporation (KEPCO)
297
298 References
299 [1] Borowitzka, M.A., 1988. Algal growth media and sources. Micro-algal
301 [2] Borowitzka, M.A., 1990. The mass culture of Dunaliella Salina. Tech. Resour. Pap.
303 [3] Chi, Z., Elloy, F., Xie, Y., Hu, Y., Chen, S., 2014. Selection of microalgae and
304 cyanobacteria strains for bicarbonate-based integrated carbon capture and algae production
306 [4] Chi, Z., O’Fallon, J. V., Chen, S., 2011. Bicarbonate produced from carbon capture
310 [6] González-Delgado, Á.D., Kafarov, V., 2011. Microalgae based biorefinery: Issues to
312 [7] Hangx, S.J.T., 2005. Subsurface mineralisation: rate of CO2 mineralisation and
313 geomechanical effects on host and seal formations, Shell International Exploration and
314 Production.
315 [8] Heo, J., Cho, D.H., Ramanan, R., Oh, H.M., Kim, H.S., 2015. PhotoBiobox: A tablet
316 sized, low-cost, high throughput photobioreactor for microalgal screening and culture
317 optimization for growth, lipid content and CO2 sequestration. Biochem. Eng. J. 103, 193-197.
318 [9] Lichtenthaler, H., Wellburn, A., 1983. Determinations of total carotenoids and
319 chlorophylls b of leaf extracts in different solvents. Biochem. Soc. Trans. 11, 591-592.
320 [10] Ma, A.T., Schmidt, C.M., Golden, J.W., 2014. Regulation of gene expression in
323 [11] Moroney, J. V., Somanchi, A., 1999. How do algae concentrate CO2 to increase the
325 [12] Moroney, J. V., Ynalvez, R.A., 2007. Proposed carbon dioxide concentrating
327 [13] Negoro, M., Shioji, N., Miyamoto, K., Micira, Y., 1991. Growth of microalgae in
328 high CO2 gas and effects of SOX and NOX. Appl. Biochem. Biotechnol. 28-29, 877-886.
329 [14] Pisal, D.S., Lele, S.S., 2005. Carotenoid production from microalga, Dunaliella
331 [15] Price, G.D., Badger, M.R., Woodger, F.J., Long, B.M., 2008. Advances in
333 components, Ci transporters, diversity, genetic regulation and prospects for engineering into
335 [16] Srinivasan, R., Kumar, V.A., Kumar, D., Ramesh, N., Babu, S., Gothandam, K.M.,
336 2015. Effect of dissolved inorganic carbon on β-carotene and fatty acid production in
338 [17] Sudhir, P., Murthy, S.D.S., 2004. Effects of salt stress on basic processes of
341 mechanism in Chlamydomonas reinhardtii: Inorganic carbon transport and CO2 recapture.
343 [19] Weissman, J.C., Goebel, R.P., 1985. Production of liquid fuels and chemicals by
344 microalgae.
345 [20] White, D.A., Pagarette, A., Rooks, P., Ali, S.T., 2013. The effect of sodium
348 [21] Xie, H.P., Wang, Y.F., He, Y., Gou, M.L., Liu, T., Wang, J.L., Tang, L., Jiang, W.,
349 Zhang, R., Xie, L.Z., Liang, B., 2014. Generation of electricity from CO2 mineralization:
350 Principle and realization. Sci. China Technol. Sci. 57, 2335-2343.
351 [22] Zeebe, R.E., Wolf-Gladrow, D.A., 2001. CO2 in seawater: Equilibrium, kinetics,
353 [23] Zhu, C.J., Lee, Y.K., 1997. Determination of biomass dry weight of marine
355
356 Fig. 1. The specific growth rates of Dunaliella salina with various concentrations of NaHCO3.
357 Fig. 2. The optimization of temperature and light intensity (a) with 5% CO2 (v/v) supply, and
358 (b) with NaHCO3 5 g L-1: red color represents high growth rate (day-1), and purple for low
359 growth rate.
361 Fig. 4. Cultivation of Dunaliella salina with pH controlled: (a) OD680 and cell number; and (b)
362 pH.
366
367
368
17
369 Fig. 2. The optimization of temperature and light intensity (a) with 5% (v/v) CO2 supply, and
370 (b) with NaHCO3 5 g L-1: red color represents high growth rate (day-1), and purple for low
371 growth rate.
372
373
374
375
18
376
377 Fig. 3. Cultivation of Dunaliella salina.
378
379
380
381
19
382 Fig. 4. Cultivation of Dunaliella salina with pH controlled: (a) OD680 and cell number; and (b)
383 pH.
384
20
385
386
387
21
389
390
391
22
392 Table 1 Element composition of cultured Dunaliella salina
393
394
23
395 Highlights
396
397 To utilize bicarbonate as carbon source for microalgae cultivation was investigated.
398 The specific growth rate of Dunaliella sp. was significantly increased with NaHCO3.
399 pH control was important to obtain high biomass productivity with bicarbonate.
400 NaHCO3 positively affected not only for growth but also for carotenoid production.
401 With bicarbonate, carbon utilization efficiency was apparently higher than with CO2.
402
24