Professional Documents
Culture Documents
The Effects of Increasing Lipidation of Apoe4 On Neurodegeneration and Alzheimer'S Disease
The Effects of Increasing Lipidation of Apoe4 On Neurodegeneration and Alzheimer'S Disease
Veronica Benedict
Table of Content
Abstract…. Pg 1
Introduction… Pg 1
Abstract
The role of the Apolipoprotein (APoE) in the pathology of Alzheimer's Disease has
become more prevalent in finding a cure for the disease. The three different isoforms of APoE,
APoE2, APoE3 and APoE4, each has its own effect on cognitive function, and the risk of
neurodegeneration from Alzhimer’s. However, scientists have found that the lipidation of the
proteins plays a major role in their function, increasing or decreasing the risk of Alzheimr’s
development. The APoE proteins provide targets for scientists to analyze their structures and
how the APoE proteins interact with the composition of the brain, and effects of changing the
makeup of these APoE proteins, specifically how the cognitive function and memory is
improved. In this study, the insight of the effects of increasing the lipidation of the APoE4
Introduction
memory and other cognitive functions . As the most common form of dementia, the most
prominent sign of the disease is memory loss, however there are many other symptoms
including, confusion, dramatic behavioral changes and difficulty performing tasks such as
age, genetics, lifestyle, and environment. Age is an important factor, for, according to the
Alzheimer's Association, most patients with Alzheimer’s are over 65. Increasing age increases
the risk of developing Alzheimer’s. One’s genetics also plays a key role in the development of
Alzheimer's. The inheritance of the Apolipoprotein E4 (APoE4) allele increases the chances of
unhealthy diet, a lack of exercise, and withdrawal from social engagement, can also increase the
risk of Alzhiemer’s, for the brain is not being stimulated to perform efficiently. Lastly, the
surrounding environment can also affect the chances of developing the disease. For instance,
according to Lewis O. J. Killin et al, exposure to heavy amounts of toxic metals and other
Specifically, the APoE protein is found to be the main “genetic factor” linked to the disease. The
APoE protein helps to maintain lipoproteins and amyloid-β (Aβ) peptide clearance in the brain.
Lipidation is an important process due to the importance of lipids and protein regulation in cell
function and growth, especially in the brain. Furthermore, Aβ peptide accumulation contributes
to amyloid plaques that are found in Alzhimer’s patients (Chia-Chen Liu et al) In addition, there
are three different isoforms of the APoE protein: APoE2, APoE3 and APoE4. Their different
functions affect their regulation of lipid binding and Aβ clearance. APoE2 is known as the
neuroprotective, for this isoform helps rescue Aβ deposition and increase clearance. The APoE3
isoform is more neutral and is the most common isoform, with a worldwide frequency of 77.9%,
according to Chia-Chen Liu et al. Finally, the APoE4 isoform is the neurodegenerative isoform
and the strongest risk factor for Alzheimer’s, for it increases Aβ deposition and impairs its ability
to bind to lipids, causing a decrease in lipidation. (Chia-Chen Liu et al) Therefore, it is important
to increase lipidation for the Apolipoprotein E-4 protein due to the effects of the three different
types of the Apolipoprotein E proteins, the connection between these isoforms and Alzheimer’s,
the effects of lipids on neurodegenerative diseases, and the potentiality of increasing lipidation.
Literature Review
Apolipoproteins (APoE) are found to be the most relevant genetic factor for Alzheimer’s
Disease. The mechanisms of these proteins impact the brain’s cognition and function as the
APoE “...is a major cholesterol carrier that supports lipid transport and injury repair in the brain.
APOE polymorphic alleles are the main genetic determinants of Alzheimer disease (AD) risk”
(Chia-Chen Liu et al, 2012) When inheriting the APoE alleles, one receives two alleles, one
allele from the father and the other from the mother. Typically, one will develop a variation of
the APoE3 (the most common allele), and inherit either APoE2 or APoE4. The different
combinations often determines the risk of Alzheimer’s, as the three different alleles, APoE2,
APoE3 and APoE4, each have different effects on cognition, which will be explained further
broken down and secreted in order to avoid plaques and aggregation. The APoE proteins play a
major role in Aβ metabolism; “APOE genotypes strongly affect deposition of Aβ to form senile
plaques and cause cerebral amyloid angiopathy (CAA), two major hallmarks of amyloid
important mechanism that allows for clearance in the brain. Without this process, Aβ plaques
Additionally, lipid binding plays a major role in cognition affected by the APoE protein.
These APoE proteins involve another class of proteins: lipoproteins. Lipoproteins are complexes
that allow for the transportation of lipids, regulating balance and function, and are primarily
made in the brain. “ApoE–lipoproteins bind to several cell-surface receptors to deliver lipids and
also to hydrophobic amyloid-β (Aβ) peptide, which is thought to initiate toxic events that lead to
synaptic dysfunction and neurodegeneration in AD.” (Chia-Chen Liu et al, 2012) Once again, the
function of lipid binding is another mechanism of APoE that regulates Aβ clearance in the brain,
to prevent neurodegeneration. The consistent transport of lipids helps to clear the periphery and
maintain stable levels of lipids and Aβ peptides. Furthermore, lipid binding in APoE proteins
involves monomeric lipids, which can react with other lipids, binding due to the C-terminal
domain. These binding domains are often followed by other binding steps. (Carl Frieden et al,
2017) The process of lipid binding involves different domains that regulate the effectiveness of
the binding of lipids. One of the domains includes the C-terminal domain which contains the
major lipoprotein-binding sites, excluding the binding receptor. This presumably results in the
APoE only being partially lipidated. Another APoE domain is the N-terminal domain, which is
linked to the C-terminal domain. Similarly to the C-terminal domain, “The [N-terminal] domain
is responsible for the LDLR-binding, yet, in isolation, binds weakly to lipids” (Jianglei Chen, et
al, 2011) The different domains of the APoE affect the binding of the lipids, which consequently
affects the effectiveness of the transportation of lipids. If the lipoproteins were to bind with lipids
only in the C-terminal or N-terminal, the lipids may not bind as effectively, causing an
Moreover, these effects are overall determined by the type of APoE protein one has. To
reinforce, with its three different isoforms, each APoE isoform has different effects on the
cognitive function of the brain. Firstly, ApoE2 has been found as a neuroprotectant, however due
to the limited research on how it provides neuroprotection, the researchers, Long Wu and Liqin
Zhao, Ph.D, designed an experiment to examine differences at the molecular level. It was found
that the brains of individuals with the ApoE2 isoforms have the strongest profiles bio-
provides the neuroprotection and benefits cognitive function is revealed. (Long Wu and Liqin
Zhao, 2016) Having an APoE2 allele will decrease the risk of developing Alzherimer’s, and
general. Additionally, unlike the other two APoE proteins, APoE2 will provide improved
The APoE3 protein is considered as to be the most common and more neutral protein, as
it does not provide neuroprotection nor cause neurodegeneration. Through the regulation of its
functions, “ApoE3 displays extensive domain interactions of salt-bridges and H-bonds, causing
shielding of the major LDLR-binding region by the [C-terminal] domain from binding to
receptors” (Jianglei Chen, et al, 2011) One of the mechanisms of APoE3 is the involvement of
the covalent interactions of the salt-bridges and H-bonds, which lead to lipids unable to bind to
the lipid receptor in the C-terminal domain. This allows for the lipids to instead remain lipidated,
which plays a vital role in cell signaling and regulation of the APoE protein function. Unlike
APoE2 and APoE4, the APoE3 mechanism allow for more neutral effects on cognition and
neurobehavior.
most likely genetic factor. APoE4 has clinically shown to advance neurodegeneration, increasing
the “...severity of cognitive decline, with a lower age of onset, and with altered response to AD
treatments.” (Long Wu and Liqin Zhao, 2016) As shown to be the commonly found genetic
factor of Alzhiemr’s, individuals with the APoE4 protein experience faster and more detrimental
affects causing neurodegeneration that those with APoE2 or APoE3. The APoE4 protein affects
many important mechanisms that occur in the brain, including Aβ deposition and domain to
domain interaction, leading to cognitive decline and neurodegeneration. Having the APoE4
protein causes “...[an] increased amount of Aβ including the more toxic oligomeric form found
deposition and plaque deposition in the brain parenchyma…” (Yu Yamazaki, et al, 2016) Unlike
toxic plaques that accumulate. This accumulation leads to the blocking of important pathways
and cerebral arteries, which damages cognitive function leading to neurodegeneration as seen
through the Alzheimer's Disease. Correspondingly, APoE4 also affects the domain-domain
interactions, which can be compared to APoE3. While APoE3 does bind to the C-terminal
domain, “APOE4 is unique in that it has increased propensity of domain-domain interactions that
reduces lipid binding to the C terminal domain leading to loss of stability and function. The
presence of Arg112 in APOE4 enhances the intramolecular interaction between its N-terminal
domain and the C-terminal domain via a salt bridge known as the APOE4 domain interaction. As
where the lipoproteins are not completely lipidated leads, is a detrimental factor of APoE4. Since
the lipoproteins are less lipidated, they are not able to effectively continue performance of
cognitive function. Lipid transfer is essential for maintaining neurons to an extent. An increase in
lipid transfer and any impairment of lipid transports could lead to neurodegeneration and
damage. (Penelope J. Hallett et al, 2019) Having lipids transfer into the APoE protein is essential
for these lipids provide important roles that help proteins, including protection, energy storage,
signaling and structure. As these lipids provide continuously provide for the APoE proteins, the
APoE is able to carry out its function, which stimulates and improves cognition of the brain. This
can be seen with the APoE3 protein, where the protein is lipidated, enabling the protein to work
effectively, which causes the individual to have normal levels of cognition. Without proper
With decreased lipidation, as seen with APoE4, the risk of neurodegeneration and
developing Alzheimer’s is increased. The lack of the transfer of lipids into the APoE4 causes the
protein to be unable to perform successfully in its functions, specifically regarding cognition and
memory. As lipidation decreases for the APoE4, “The effects… may result in reduced neuronal
protection or repair. Neuronal injury increases brain APOE levels, although the increase is not
immediate. The presence of an APOE4 allele decreases the brain’s neuronal reparative capacity
in AD patients.” (Rebeck, 2017) One of the neurodegenerative factors of the APoE4 includes its
hypolididated characteristics. Due to the lack of lipidation, the APoE is unable to successfully
perform its function, causing insufficiency in cognition and memory of the individual.
Additionally, the presence of the APoE4 inhibits the neuroprotective role the APoE protein plays
Currently, several research regarding potential treatment plans for Alzhier’s is being
conducted. One of the more prominent methods related to the using of the APoE4 as a target fro
treatment. Since the APoE4 allele of the APoE protein has many factors that add up to its
neurodegenerative characteristics, there are different methods for targeting APoE4. Firstly, the
increasing of the expression of the Abca1 regulatory protein in the APoE4 has become a
potential method. ABCA1 is an important factor in lipidation of ApoE genes, and if increased,
could provide a potential treatment method for ApoE-4 isoforms.(Safieh, M., Korczyn, et al,
2019) Although the research is still recent, there have been findings related to the Abca1 and
APoE4, and how its expression can help decrease or eliminate the neurodegenerative effects of
the APoE4. With the Abca1, the APoE protein will be able to better perform cognitive tasks,
improving memory and reducing the risk of cognitive decline from Alzhiemr’s. Furthermore, as
[amyloid responses] while overexpression of ABCA1 reduces the amyloid load in PDAPP
transgenic mice. [This supports] the hypothesis that ABCA1-mediated lipidation is crucial Aβ
clearance,” (Williams et al, 2020) With the expression of Abca1, the neurotoxic effects of
APoE4 will be reduced, allowing for improved cognitive levels and memory.
Another prominent method targeting APoE4 is the correction of the domain interactions
of the proteins to other molecules. “...[When] apoE4 is expressed in neurons under stress,
domain interaction is responsible for [breakdown] of… apoE4 into neurotoxic fragments.
dysfunction in neurons. Small molecule structure correctors that interfere with this property and
convert apoE4 to an apoE3-like molecule have been reported to mitigate the neurotoxic effects”
(Suidan and Ramaswamy, 2019) Through the improvement of the domain interactions of APoE4,
more molecules will be able to interact and bidn with the APoE, allowing for the reduction of the
neurotoxicity of the APoE4. Additionally, through this method, the APoE4 will be made more
similar to the characteristics of the APoE3, allowing for more neutral effects relating to cognition
and memory.
Finally, one of the more promising methods that is being studied is the increasing of
lipidation of the hypolipidated APoE4. A key factor of this method accounts for the expression
of Abca1. As many studies have shown, “... a direct peptide activator of abca1, CS-6253, has …
[increased] lipidation of apoE4... suggesting that increasing apoE4 lipidation via Abca1
activation could overcome the pathological effects of the apoE4 allele (Suidan and Ramaswamy,
2019) Through the expression of Abca1 and the increasing of lipidation in the APoE4, this
method has the potential to decrease the risk of neurodegeneration caused by APoE4. Increasing
lipidation will allow for more molecules and lipids the APoE4 is deprived of to enter the protein
and provide for the APoE. Therefore, increasing lipidation through the expression of Abca1 will
decrease the chances of an individual developing Alzheimer’s. This will be further explained
below.
Data Collection
Part I:
“ABCA1 To utilize CS- The Abca1 In this study, the The results of
Agonist 6253, which agonist, CS- researchers used this study
Reverses the would activate 6253, increased the CS-6253, showed to be
ApoE4- Driven Abca1, and Abca1 levels in which enabled effective, as the
Cognitive and examine the APoE4 mice, as Abca1, which is mice showed
Brain extent to which well as lipidation a major transport improved
Pathologies” it can affect the levels. These protein related to cognitive
(Anat Boehm- degree of levels were lipidation and function and
Cagana, Roni lipidation of unaffected in the homeostasis of memory.
Bara, Ori Liraza, APoE4 and APoE3 mice. lipoproteins. The Additionally,
John K. counteract the researchers although
Bielickib, Jan O. associated brain essentially performance
Johanssonc and and behavioral increased the levels of the
Daniel M. pathologies. lipidation APoE3 group
Michaelson, pathway of were higher, the
2016) APoE4 to APoE4 group
stimulate only differed by
lipidation and a small margin
change its of...
characteristics to
be more similar
to APoE3.
Part II (Analysis):
Rationale:
to find information from previous case studies that have shown the effects of the drug, CS-6253,
using a qualitative research design. Furthermore, to collect data, an experimental data collection
method would be most effective to study the effects of the independent variable, CS-6253, on the
dependent variable, APoE4. To collect this data, using the data collection method of meta-
analysis was the most appropriate method due to the limited resources that the researcher
physically has. However the researcher did have access to the many studies that have been
conducted over the years, which made meta-analysis the most feasible method. By analyzing
raw, reliable data from four case studies, key results from each of the studies were found. The
studies all collectively have similar methodologies and results throughout their trials. Similarly,
their background information and purposes are also almost complementary, if not the same.
Additionally, it was important to find studies that well explained the importance of finding a
method to treat APoE4 in a manner that reverses its effects, but does not affect the genotypic or
phenotypic levels of APoE3 This allowed for the comparison of the effects of CS-6253 on
APoE4 shown through all the case studies to determine how effective CS-6253 is in reversing
Analysis
The four studies analyzed all had similar results and processes used by throughout their
processes. As shown in the table above, the authors of three of the four studies were able to use
the CS-6253 peptide to alter its levels to match APoE3 levels, while also not affecting the
APoE3 proteins in the mice. The study conducted by Hafiene et. al. however did not examine the
effects of CS-6253 on APoE3. Through these studies, as well as from previous research, it was
proven that one of the major differences between the APoE3 protein and APoE4 protein is their
lipidation levels. However, this difference was adjusted by the CS-6253 peptide to be more
similar to APoE3. This not only led to lipidation levels being similar among the two proteins, but
also Aβ deposition. Most importantly, cognitive levels of the mice with APoE4 protein increased
and these mice had better cognitive function and spatial learning abilities.
Additionally, among all four studies, the findings were consistent and there were major
no outliers in the data. This illustrates how CS-6253 poses as a viable method that could be used
to target APoE4 in Alzhimer’s patients. Nevertheless, these studies also had a few risks involved
using CS-6253. Specifically, in the study, “ABCA1 Agonist Reverses the ApoE4- Driven
Cognitive and Brain Pathologies,” the authors, Boehm-Cagana et. al., state the possibility of risks
being involved in the study since they did not completely know the full mechanism of the
peptide, and how the APoE4 protein could be affected. Although this risk created some
uncertainty at the beginning of the study, the authors were still successful in completing their
study and they acquired results that correlated with the findings of the other three studies.
Conclusion
The results of these studies show the extent to how successful CS-6253 is in altering
APoE4 to correspond to APoE3 levels. Overall, using the CS-6253 peptide is a viable method
that could be used to target APoE4 in Alzhiemer’s patients to increase its lipidation, improve
cognitive performance, and decrease Aβ accumulation, to allow the protein to have similar
effects to APoE3. This ultimately improves cognitive function and spatial learning. Additionally,
lipidation is generally an important factor in APoE, which was heavily expressed throughout
several literature review articles. This was proven in these studies as well, as the mice with the
APoE4 protein had improved cognitive function as they received the CS-6253 peptide compared
to the control APoE4 mice. This again illustrates how important this method is and its possibility
of being used to treat Alzhiemer’s patients. Using peptides such as CS-6253 and finding more
treatment methods that increase lipidation long term is an important goal to find for people
suffering from Alzheimer’s Disease. With increased lipidation, cognitive function and memory is
improved, and the brain is further stimulated to improve its activity. With these results, scientists
in the future will be able to continue to develop treatment methods to treat APoE4 and
Alzheimer’s patients, and eventually a cure, to help decrease the amount of people suffering
Conclusion
almost 44 million people worldwide. Although caused by a variety of factors, the impact of the
APoE4 protein in the development of the Alzheimer's Disease has been proven to be one of the
most unparalleled genetic risk factors. Over the years, many studies have shown the significance
of the APoE protein and how it affects the cognitive function of individuals with APoE4.
However, more recently, an increasingly amount of studies have shown that the decreased
Furthermore, studies and trials have also shown that increasing the lipidation of the APoE
improves cognitive function in mice, proving that increasing lipidation of APoE4 is an effective
method to continue to study. In summary, it is important to continue further research into the
Abca1 Deficiency Affects Alzheimer's Disease-like Phenotype in Human Apoe4 But Not in
https://www.jneurosci.org/content/32/38/13125
"ApoE3 displays extensive domain interactions of salt-bridges and H-bonds, causing shielding of
the major LDLR-binding region by the [C-terminal] domain from binding to receptors"
Boehm-Cagan, A., Bar, R., Liraz, O., Bielicki, J. K., Johansson, J. O., & Michaelson, D. M.
(2016). ABCA1 Agonist Reverses the ApoE4-Driven Cognitive and Brain Pathologies.
160467
Boehm-Cagan, A., Bar, R., Harats, D., Shaish, A., Levkovitz, H., Bielicki, J. K., Johansson, J. O.,
https://doi.org/10.1371/journal.pone.0166195
Frieden, C., Wang, H., & Ho, C. (2017). A mechanism for lipid binding to apoE and the role of
the National Academy of Sciences of the United States of America, 114(24), 6292–6297.
https://doi.org/10.1073/pnas.1705080114
Hafiane, A., Bielicki, J. K., Johansson, J. O., & Genest, J. (2015). Novel Apo E-Derived ABCA1
https://doi.org/10.1371/journal.pone.0131997
https://www.ncbi.nlm.nih.gov/pubmed/31331333
Liu, C. C., Liu, C. C., Kanekiyo, T., Xu, H., & Bu, G. (2013). Apolipoprotein E and Alzheimer
disease: risk, mechanisms and therapy. Nature reviews. Neurology, 9(2), 106–118.
https://doi.org/10.1038/nrneurol.2012.263
Rebeck G. W. (2017). The role of APOE on lipid homeostasis and inflammation in normal
Safieh, M., Korczyn, A.D. & Michaelson, D.M. ApoE4: an emerging therapeutic target for
4
Targeting Apolipoprotein E For Alzheimer's Disease: An Industry PerspectiveGeorgette Suidan-
Williams, T., Borchelt, D.R. & Chakrabarty, P. Therapeutic approaches targeting Apolipoprotein
https://doi.org/10.1186/s13024-020-0358-9
Wu, L., & Zhao, L. (2016). ApoE2 and Alzheimer's disease: time to take a closer look. Neural
Yamazaki, Y., Painter, M. M., Bu, G., & Kanekiyo, T. (2016). Apolipoprotein E as a Therapeutic
Target in Alzheimer's Disease: A Review of Basic Research and Clinical Evidence. CNS