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Article in Press: Seminars in Cell & Developmental Biology
Article in Press: Seminars in Cell & Developmental Biology
1 Review
8
22 a r t i c l e i n f o a b s t r a c t
9
10 Article history: Paraganglioma and pheochromocytoma are neuroendocrine tumors that originate from either the sym-
11 Received 20 March 2015 pathetic or the parasympathetic branches of the autonomic nervous system. Although 14 different genes
12 Received in revised form 27 May 2015 have been linked to paraganglioma/pheochromocytoma, a subgroup of these genes is associated with
13 Accepted 28 May 2015
hereditary paraganglioma–pheochromocytoma, the genes related to mitochondrial succinate dehydro-
14 Available online xxx
genase (SDH) including SDHA, SDHB, SDHC, SDHD and the assembly factor SDHAF2. Unlike mutations in
15
other SDH subunit genes, mutations in SDHD and SDHAF2 show a remarkable parent-of-origin dependent
16 Keywords:
tumorigenesis in which tumor formation almost exclusively occurs following paternal transmission of
17 Paraganglioma
18 Pheochromocytoma the mutation. To date, three different models have sought to explain the striking inheritance pattern seen
19 SDHAF2 in SDHD and SDHAF2-linked families. Despite the fact that the models suffer to varying degrees from a
20 SDHD lack of experimental verification, all three models have made some attempt to incorporate current data
21 MAX and understanding of this phenomenon. In this review, we discuss our present understanding of this
phenomenon and describe the three models that seek to explain the inheritance pattern in SDHD and
SDHAF2-linked families.
© 2015 Elsevier Ltd. All rights reserved.
23 Contents
24 1. Introduction . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 00
25 2. Associated genes . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 00
26 3. Succinate dehydrogenase . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 00
27 4. MAX . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 00
28 5. Inheritance pattern . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 00
29 6. Models of parent-of-origin tumorigenesis . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 00
30 6.1. The Hensen model . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 00
31 6.2. The Muller threshold model . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 00
32 6.3. The Baysal methylated boundary element model . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 00
33 7. Conclusions . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 00
34 Acknowledgement . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 00
35 References . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 00
36
39
38 The neuroendocrine tumor, paraganglioma, is associated with tem. Parasympathetic paragangliomas occur most commonly in the 42
both the sympathetic and parasympathetic nervous systems. head and neck region and most frequently arise in the carotid body 43
Q2 sity Medical Centre, PZ S-04, P.O. Box 9600, 2300 RC Leiden, The Netherlands.
of the head and neck usually show relatively mild symptoms and 47
Tel.: +31 715269512; fax: +31 715268285. display a characteristically indolent tumor progression [2]. Promi- 48
E-mail address: j.p.l.bayley@lumc.nl (J.-P. Bayley). nent characteristics of pheochromocytomas and extra-adrenal 49
http://dx.doi.org/10.1016/j.semcdb.2015.05.011
1084-9521/© 2015 Elsevier Ltd. All rights reserved.
Please cite this article in press as: Hoekstra AS, et al. Models of parent-of-origin tumorigenesis in hereditary paraganglioma. Semin Cell
Dev Biol (2015), http://dx.doi.org/10.1016/j.semcdb.2015.05.011
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50 paragangliomas are the hypersecretion of catecholamines and essential for the correct flavination of SDHA and function of the SDH 111
51 elevated blood pressure. Sympathetic paragangliomas also show complex. The first mutation identified in SDHAF2, a missense vari- 112
52 a greater propensity for malignant degeneration compared to ant c.232G>A (p.Gly78Arg), was identified in a large Dutch head and 113
53 pheochromocytomas or head and neck paragangliomas [3]. neck paraganglioma kindred and was shown to result in the loss of 114
67 The SDHD and SDHAF2 genes both encode proteins related to the tion factor that forms a complex with the important oncogene MYC. 128
68 mitochondrial succinate dehydrogenase (SDH) complex and tumor MAX is also found in repressor complexes with other transcrip- 129
69 development occurs almost exclusively in carriers of paternal tion factors, which effectively oppose the function of the MYC-MAX 130
70 mutations [6,7]. Carriers of MAX mutations also show ‘paternal- heterodimer [25]. Germline loss-of-function MAX mutations were 131
71 only’ tumor development, but in contrast to the so-called cluster 1 identified by sequencing the entire exome of 3 unrelated patients 132
72 pseudohypoxia-driven tumors including the SDH genes and VHL, with a family history of pheochromocytoma [8]. Intriguingly, these 133
73 MAX mutations are associated with cluster 2, the PGL/PCC subgroup patients exhibited a loss of heterozygosity of the wild-type allele 134
74 thought to be associated with kinase signaling [5,8]. that was shown to be dependent on uniparental disomy (in this 135
101 inducible factor (HIF). Leiden University Medical Center noticed an unusual pattern of 162
102 Despite the close functional relationship of the SDH proteins, tumor inheritance in families with paraganglioma type 1 (PGL1), 163
103 mutations result in striking differences in both tumor location and with an apparently exclusive development of tumors in the chil- 164
104 clinical phenotype. The molecular basis for this clinical divergence dren of male family members [7]. Clinicians and scientists working 165
105 is not yet understood. at Leiden University Medical Center were well-placed to recog- 166
106 SDHAF2 encodes a gene for a novel protein that acts as an acces- nize the paternal inheritance of PGL1 tumor susceptibility due 167
107 sory/assembly factor for the SDH complex, adding a flavin-adenine to the predominance of PGL1-linked cases, and absence of cases 168
108 dinucleotide (FAD) prosthetic group to form a catalytically active linked to other genes, amongst the numerous affected families in 169
109 SDHA flavoprotein. Initially referred to as SDH5, the succinate dehy- the immediate Leiden area. In a second area of the Netherlands, 170
110 drogenase complex assembly factor 2 (SDHAF2) was shown to be the Nijmegen/Den Bosch region, researchers from the Radboud 171
Please cite this article in press as: Hoekstra AS, et al. Models of parent-of-origin tumorigenesis in hereditary paraganglioma. Semin Cell
Dev Biol (2015), http://dx.doi.org/10.1016/j.semcdb.2015.05.011
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172 University Medical Center recognized another focus of paragan- heterogeneity and copy neutral LOH could impair the detection of 234
173 glioma patients that showed a similar phenomenon of exclusively genomic alterations in some tumor samples [42]. In addition, other 235
174 paternal transmission of disease susceptibility [28]. It became clear genetic and epigenetic mechanisms may result in functional loss of 236
175 early on that a second and distinct genetic locus was responsible one or more genes in the 11p region. It is interesting to note that 237
176 for disease in these patients [29]. These gene loci were described as chromosome 11p loss is also a prominent feature in VHL-related 238
177 PGL1 and PGL2, and were later shown to harbor mutations in the PGL/PCC [41,43]. 239
178 SDHD (2000) and SDHAF2 (2009) genes, respectively [6,10]. If the loss of chromosome 11 is important for the development 240
179 The failure of maternally transmitted mutations to initiate of all SDH-related tumors, one prediction of the Hensen model 241
180 tumorigenesis initially suggested that a maternally imprinted gene is that mutations in SDHD and SDHAF2 will display higher pene- 242
181 could be the underlying cause of the tumor [7]. However, follow- trance than mutations in SDHA, B, or C. Tumorigenesis in SDHD and 243
182 ing the identification of SDHD it was demonstrated that the gene SDHAF2 mutation carriers requires only a single somatic genetic 244
183 shows biallelic expression in a range of fetal and adult tissues event (chromosome 11 loss), as opposed to the two events required 245
184 [10,30]. Subsequent studies also failed to uncover evidence for gene in SDHA, B, and C mutation carriers (loss of the respective wild- 246
185 methylation in any tissue analyzed to date [30–32]. It could be type allele, together with independent loss of chromosome 11). 247
186 argued that these findings were not unexpected, due to both the This prediction appears to be borne out by the wide difference in 248
187 ubiquitous and essential nature of the SDH enzyme and because lifetime penetrance between mutations in SDHD (∼90%) [44] and 249
188 mutation carriers with a paternally inherited mutation would expe- SDHAF2 (>95%) [45], compared to SDHB (∼30%) [46–48], and SDHA 250
189 rience a profound deficiency of succinate dehydrogenase activity, and SDHC (both with unknown, but probably very low, penetrance). 251
190 a situation known to cause major developmental defects [33]. Particularly striking is the contrast in penetrance between germline 252
191 Unsurprisingly, homozygous knockout of SDHD in mice results in mutations of SDHA, in which carriers appear to be sporadic cases, 253
192 embryonic lethality [34,35]. Even if one assumes that SDHD shows and its assembly factor, SDHAF2, in which germline mutations have 254
193 tissue-specific or temporally restricted monoallelic expression, the a clearly familial presentation and display almost full penetrance 255
194 complete absence of SDH in any tissue during development would in known pedigrees. As the role of SDHAF2 mutations in tumori- 256
195 probably be incompatible with normal development. genesis is thought to be mediated through the loss of SDHA, SDHA 257
196 6. Models of parent-of-origin tumorigenesis The Hensen Model is also relevant to the rare cases in which 260
197 6.1. The Hensen model leagues predicted that “when the SDHD mutation is maternally 262
198 Against a background of a theoretical model of direct maternal mechanisms will be required. . . namely loss of the paternal wild- 264
199 imprinting, an unexpected finding in SDHD-linked paragangliomas type SDHD allele by, for example, mitotic recombination, followed 265
200 was the frequent loss of the maternal copy of chromosome 11 by loss of the recombined paternal chromosome containing the 266
201 [36–39]. Although this conforms to the Knudson two-hit model for paternal 11q23 region and the maternal 11p15 region” [37]. This 267
202 tumor suppressor genes in which the remaining wild-type allele is phenomenon has indeed been observed in at least two cases of 268
203 lost early in tumorigenesis, it is counterintuitive if one assumes maternal inheritance. Both cases were patients with pheochromo- 269
204 that imprinting inactivates the maternal allele. The presence of cytoma, caused by either a c.242CT SDHD mutation [49] or by the 270
205 a paternal parent-of-origin effect in SDHAF2-associated paragan- Dutch founder mutation, c.274G>T, in SDHD [50], both inherited via 271
206 glioma families, together with its absence in families caused by the maternal line. Analysis of microsatellite markers revealed only 272
207 other SDH genes, again argues that their location on chromosome partial loss of the paternal chromosome, with loss of a significant 273
208 11 is an important factor in SDHD- and SDHAF2-related tumorigen- proportion of the maternal chromosome 11 including the p arm 274
209 esis. and centromeric q arm. Both cases showed somatic recombination 275
210 Taken together, these observations suggested that a simple of chromosome 11 in the tumor, resulting in loss of the paternal 276
211 model, in which a paternal mutation is accompanied by a mater- wild-type SDHD gene and the maternal 11p15 region. 277
216 [37]. While there is no evidence that either SDHD or SDHAF2 are effects has been advanced by Ulrich Muller, one of the researchers 280
217 imprinted, the main cluster of human imprinted genes is located on involved in the identification of SDHC as the gene underlying 281
218 the short arm of chromosome 11 (11p15). This led to the hypothesis paraganglioma, type 3 (PGL3)[51]. This ‘threshold model’ assumes 282
219 that loss of the maternal copy of chromosome 11 in paragan- a “partial inactivation” of the maternally derived copies of either 283
220 glionic cells of individuals carrying a paternally derived mutation in SDHD or SDHAF2 and requires the existence of a mechanism 284
221 SDHD or SDHAF2 not only completely inactivated wild-type activ- of partial imprinting [52]. Given that all studies to date have 285
222 ity at these loci, but also a critical maternally expressed, paternally found no increase in DNA methylation in the promoter region of 286
223 imprinted gene in the 11p15 region (Fig. 1). It is conceivable that SDHD, partial inactivation of SDHD would require an alternative 287
224 the loss of this as yet unidentified locus (or loci) in 11p15 pro- mechanism. 288
225 vides the necessary conditions in which SDHD-null cells can foster The model proposes that partial inactivation of the maternal 289
226 tumor development. Several genes on chromosome 11 are known allele, together with an inactivating mutation on the paternal allele, 290
227 to be exclusively maternally expressed, including CDKN1C, KCNQ1, results in a state in which some residual activity of SDH is main- 291
228 KCNQ1DN, ZNF215, SLC22A18, PHLDA2, OSBPL5, and H19. A well- tained in cells with a paternally derived mutation (Fig. 2). This 292
229 described gene in the chromosome 11p15.5 region is CDKN1C, the residual activity is sufficient to maintain normal function in para- 293
230 expression of which is frequently deregulated in imprinting disor- ganglia cells over long periods (decades). Functionally, the model 294
231 ders such as Beckwith–Wiedemann Syndrome and Silver–Russell goes on to postulate that ongoing exposure to elevated levels of 295
232 Syndrome [40]. Although it has been shown that the loss of chromo- ROS and succinate (both known to be elevated by SDH gene muta- 296
233 some 11p does not occur in all SDH-related PGL/PCC [37,41], tumor tions), together with chronic hypoxia, favor pathogenic processes 297
Please cite this article in press as: Hoekstra AS, et al. Models of parent-of-origin tumorigenesis in hereditary paraganglioma. Semin Cell
Dev Biol (2015), http://dx.doi.org/10.1016/j.semcdb.2015.05.011
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Fig. 1. Hensen model explaining parent-of-origin transmission in SDHD-linked PGL/PCC. Maternal (white) and paternal (gray) chromosomes 11 are depicted. (a) Paternal
transmission of an SDHD mutation together with loss of maternal chromosome 11 targets both the wildtype maternal SDHD allele and a second tumor suppressor gene –
tumor formation is initiated. (b) In the case of transmission of a maternal SDHD mutation, followed by loss of paternal chromosome 11, a second tumor suppressor gene is
still present on the maternal chromosome and tumor formation is suppressed. (c) Upon maternal transmission of a mutated SDHD gene, two events are required for tumor
development: mitotic recombination of the paternal wildtype SDHD allele with a section of the maternal chromosome containing a second tumor suppressor gene, followed
by loss of the recombined chromosome.
298 and chromosomal nondisjunction. This results in loss of maternal Other mechanisms such as inhibition of histone demethylases 314
299 chromosome 11 and causes SDH activity to dip below a permissive [23,53,54] or inhibition of EglN3-mediated apoptosis [55] have 315
300 threshold, triggering the adult-onset of PGL tumorigenesis (Fig. 2b). been linked to SDH-related PGL, which can’t be explained by the 316
301 Conversely, a maternally derived mutation does not have a simi- ‘Muller Threshold’ model. 317
302 larly deleterious effect because sufficient SDH activity and normal A virtue of the ‘Muller Threshold’ hypothesis is that it makes 318
303 function is maintained due to the activity of the paternally derived a clear prediction regarding activities of the respective maternal 319
304 wild-type SDHD allele (Fig. 2c). SDH activity is thus at close to nor- and paternal alleles of the SDHD/SDHAF2 genes and as such exper- 320
305 mal levels (Fig. 2a). In contrast to a paternally derived mutation, imental verification appears to be relatively straightforward. If we 321
306 elevated ROS, succinate and chronic hypoxia are avoided and the assume that gene alleles show differing activities dependent on 322
307 cellular milieu disfavors nondisjunction or loss of the wild-type the parent-of-origin, this could be demonstrated by allele-specific 323
308 allele. expression studies in healthy individuals. The proposed effects 324
309 A weakness of this hypothesis is that it explicitly posits that of low SDH activities on the cellular milieu could be established 325
310 hypoxic stimulation via HIF underlies tumor formation. Whereas through the study of in vitro systems or of primary cells from 326
311 HIF activation is a prominent feature of SDH-related paragan- SDHD/SDHAF2 mutation carriers with either maternal or paternally 327
312 gliomas, it remains unclear how, or indeed whether, it is directly inherited mutations. However, to the best of our knowledge no 328
313 involved in triggering or promoting tumor formation in PGL/PCC. supporting data have appeared to date. 329
Please cite this article in press as: Hoekstra AS, et al. Models of parent-of-origin tumorigenesis in hereditary paraganglioma. Semin Cell
Dev Biol (2015), http://dx.doi.org/10.1016/j.semcdb.2015.05.011
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Fig. 2. Threshold model of partial imprinting (inactivation) leading to tumor formation in SDHD-linked PGL/PCC. Maternal (white) and paternal (gray) chromosomes 11 are
depicted. (a) In wildtype cells, SDH activity is high and succinate, ROS and HIF1␣ levels are low due to sufficient combined maternal and paternal expression of SDHD –
tumor formation is not initiated. (b) Paternal transmission of an SDHD mutation eliminates the dominant SDHD allele, decreasing SDH activity and increasing succinate, ROS
and HIF1␣ levels. Chronic cellular hypoxia rises above a threshold (dotted line) beyond which non-disjunction and tumor formation can take place. (c) Following maternal
transmission of an SDHD mutation, sufficient expression and SDH activity is maintained thanks to the paternal allele. Succinate, ROS and HIF1␣ levels remain below the
threshold and tumor formation is suppressed.
Q7 Figure modified from Müller [52].
330 6.3. The Baysal methylated boundary element model of CpG island methylation, the authors widened their search for 346
a DMR-like element and found two CpG islands (#1 & #2) 9.5 kb 347
331 Another model that addresses the SDHD-linked parent-of-origin upstream of UPGL that function as an alternative promoter. 348
332 dependent inheritance pattern focuses on the idea that expression As a previous study had identified a strong binding site for the 349
333 at or near the SDHD locus determines the pattern of inheritance chromatin regulator CCCTC-binding factor (CTCF) within a UPGL 350
334 [30]. This model is broadly similar to the Muller model in that it CpG island, the authors performed ChIP analyses and confirmed 351
335 supposes differential activity of the two parental alleles at the SDHD strong CTCF binding at CpG island #1 in adrenal and lung tissues 352
336 locus but with an emphasis on the underlying genetic mechanism. [30]. However, in contrast to imprinted loci such as the IGF2/H19 353
337 Baysal and colleagues studied the SDHD region, in which they locus, there was no evidence of significant CpG methylation in the 354
338 identified a differentially methylated CpG island that serves as an CTCF-binding site in either normal tissue or in PGL tumors. Cohesin 355
339 alternative promoter for a large intergenic non-coding (lincRNA), is a chromatin-associated protein complex with a diverse range of 356
340 which the authors termed Untranslated in ParaGanglioma Locus functions, one of which includes co-localizing with CTCF to act as 357
341 (UPGL) [30]. This element is located at the boundary between the an isolator in the IGF2/H19 region. The authors found that RAD21, 358
342 SDHD locus and a flanking gene desert and the authors speculated a cohesin subunit, showed increased binding in fetal adrenal tissue 359
343 that as such it resembles the IGF2/H19 region and therefore might relative to fetal lung and brain [30]. 360
344 also harbor a differentially methylated region (DMR) as controlling Mechanistically, Baysal and colleagues went on to speculate that 361
345 element. As the immediate UPGL promoter showed no evidence CTCF-cohesin binding to the hypermethylated maternal allele of 362
Please cite this article in press as: Hoekstra AS, et al. Models of parent-of-origin tumorigenesis in hereditary paraganglioma. Semin Cell
Dev Biol (2015), http://dx.doi.org/10.1016/j.semcdb.2015.05.011
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Fig. 3. Differential long-range accessibility of a downstream enhancer to the SDHD promoter by genomic imprinting. On the paternal allele, a cis-acting element such as
an enhancer may gain access to the SDHD promoter, since cohesion engagement to CTCF may be competitively inhibited by a transcription factor bound to unmethylated
alternative UPGL promoter, resulting in high SDHD expression. On the maternal allele, the alternative UPGL promoter is methylated, making the enhancer instead available
to the UPGL promoter, resulting in low SDHD expression.
Q8 Figure modified from Baysal (2013).
363 the UPGL alternative promoter creates an insulator that interferes absent at the SDHA, SDHB and SDHC loci, explaining the lack of a 396
364 with a functional interaction of the SDHD promoter and a cis-acting parent-of-origin effect on these genes. 397
Please cite this article in press as: Hoekstra AS, et al. Models of parent-of-origin tumorigenesis in hereditary paraganglioma. Semin Cell
Dev Biol (2015), http://dx.doi.org/10.1016/j.semcdb.2015.05.011
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Q5
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