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Transaminases: Scheme 1 General Reaction Scheme For - Transaminase-Catalyzed Asymmetric Reductive Amination
Transaminases: Scheme 1 General Reaction Scheme For - Transaminase-Catalyzed Asymmetric Reductive Amination
2.4.3 ø-Transaminases
R. C. Simon, E. Busto, E.-M. Fischereder, C. S. Fuchs, D. Pressnitz, N. Richter, and
W. Kroutil
General Introduction
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ø-Transaminases[1–12] (EC 2.6.1.X) catalyze the reversible transformation of a ketone to an
amine via reductive amination. The nitrogen and the electrons are transferred to the ke-
tone from pyridoxamine 5¢-phosphate (PMP), thereby releasing pyridoxal 5¢-phosphate
(PLP) (Scheme 1).
O NH2
ω-transaminase
R1 R2 R1 R2
NH2 H O
OH HO
2−O
3PO OPO32−
N N
PMP PLP
The catalytically required cofactor PLP is ideally recycled to PMP by the same ø-transami-
nase at the expense of an amine donor, which is usually required in stoichiometric
amounts (Scheme 2). Common amine donors employed include alanine or diverse alkyl-
and (arylalkyl)amines.[7,13,14] When using alanine as the amine donor, the thermodynamic
equilibrium is in general on the side of the starting materials (ketone and alanine);[15] con-
sequently, the coproduct, pyruvate, needs to be removed in order to shift the equilibrium
to the product side. This is mainly achieved with a consecutive enzymatic step.[7] More-
over, since ø-transaminases are mostly enantiospecific, enantiopure l- or d-alanine
must be employed. In the case of isopropylamine as amine donor, removal of the coprod-
uct acetone via evaporation is feasible[16] as well as the application of huge amounts there-
of.[17,18] 1-Phenylethylamine is well suited for thermodynamic reasons,[13] but it is the most
expensive choice, especially as only one enantiomer is transformed by stereoselective
ø-transaminases. Thus, either optically pure 1-phenylethylamine is applied or more
workup efforts are required to separate and recover all products.
O NH2
ω-transaminase
R1 R2 R1 ∗ R2
PMP PLP
O NH2
R3 R3
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R3 = Me, CO2H, Ph, etc.
PLP PMP
NH2 O
CO2H CO2H
Regarding the overall efficiency, the reductive amination is generally favored, because
the product can be obtained in up to 100% yield in contrast to only 50% via kinetic resolu-
tion. For the sake of clarity, the cofactor PLP/PMP cycle is not displayed in the schemes
below.
One option to shift the unfavorable thermodynamic equilibrium toward product forma-
tion when using alanine as amine donor is to reduce the coproduct pyruvate to lactate via
a lactate dehydrogenase (LDH). For this particular transformation, additional reducing
equivalents in the form of NADH are required; therefore, a further subsystem containing
a third enzyme such as either glucose dehydrogenase (GDH) or formate dehydrogenase
(FDH) is needed. For practical reasons (accessibility of the enzyme, commercial availabil-
ity, etc.), glucose dehydrogenase is most commonly employed, although pH control is re-
quired on a preparative scale due to the formation of gluconic acid.[7,12,17,19–21] The LDH sys-
tem has also been applied in the presence of organic cosolvents such as dimethyl sulfox-
ide (Scheme 4).[19,22–24]
2.4.3 ø-Transaminases 385
ω-transaminase
O PLP, buffer
NH2
R1 ∗ R1
NH2 O OH
OH OH LDH OH
O O O
NADH NAD+
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GDH
gluconolactone glucose
Coproduct removal not only shifts the unfavorable thermodynamic equilibrium to the
product side but also prevents possible inhibition of the ø-transaminases by, for example,
pyruvate. Inhibition of the ø-transaminase by pyruvate, as well as by other ketones, may
become an important issue at increased substrate concentration and is therefore of par-
ticular interest.[25] For instance, 1-phenylethylamine (2) is a strong inhibitor for ø-trans-
aminases, although it is still accessible by the transformation of acetophenone (1) in
high substrate concentrations of 50 g/L in a system whereby the formed product is re-
moved from the reaction medium using an acidic ion-exchange resin (Amberlite XAD
1180).[26] After biotransformation, the product can be easily recovered by washing the
resin under basic conditions. Employing this concept, (R)- and (S)-1-phenylethylamine (2)
can be produced in enantiomerically pure form with >90% isolated yield using stereocom-
plementary, commercially available ø-transaminases (Scheme 5).
ω-transaminase
O PLP, buffer
NH2
Ph Ph ∗
1 2 >90%; >99% ee
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NH2 O OH
OH OH LDH OH
O O O
NADH NAD+
GDH
gluconolactone glucose
ω-transaminase
PLP, buffer (pH 7)
Me O 30 oC, 24 h
Me NH2
N O N O
Et Et
O O
NH2 O OH
OH OH LDH OH
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O O O
NADH NAD+
GDH
gluconolactone glucose
MK-6096 (8) is an orexin receptor agonist and hence a potential drug for the treatment of
insomnia. A process for MK-6096 has been developed including an ø-transaminase-cata-
lyzed asymmetric reductive amination as the key step. Notably, the chemoenzymatic syn-
thesis for this pharmaceutical has been established on a kilogram scale (Scheme 7).[31]
In this approach, the chirality on the 6-methylpiperidin-2-one core (6R)-7 is intro-
duced via enzymatic transamination using a commercially available ø-transaminase
(ATA-117). The utilization of d-alanine as the amine source allows the transformation of
the oxo diester 5 into the corresponding amino diester (R)-6, which cyclizes spontaneous-
ly to afford the optically pure lactam (6R)-7 (>99% ee). The thermodynamic equilibrium is
shifted toward product formation for two reasons: on the one hand the amino diester (R)-6
spontaneously cyclizes to the desired piperidin-2-one (6R)-7, avoiding concomitant prod-
uct inhibition. On the other hand, the formed pyruvate is removed employing the LDH
system to circumvent inhibition of the enzyme by pyruvate. This process illustrates the
high applicability of the LDH system in large-scale processes.
Scheme 7 A Biocatalytic Key Step in the Chemoenzymatic Synthesis of the Orexin Receptor
Antagonist MK-6096[31]
ATA-117, PLP
buffer (pH 7.4)
O CO2Me NH2 CO2Me
30 oC, 42 h
HN
CO2Me CO2Me CO2Me
2 2
O
5 (R)-6 (6R)-7
NH2 O OH
LDH
OH OH OH
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O O O
NADH NAD+
GDH
gluconolactone glucose
N O
HN
CO2Me O N
N N F
O
(6R)-7 8 MK-6096
2.4.3.1.1.1.2.1 (S)-Amination
An alternative method to shift the equilibrium involves the recycling of l-alanine from
pyruvate using three different types of enzymes:[17,32] an ø-transaminase, an alanine dehy-
drogenase (AlaDH), and either glucose dehydrogenase (GDH) or formate dehydrogenase
(FDH). As the AlaDH recycles pyruvate to l-alanine by consuming NADH and ammonia,
additional recycling of NADH becomes necessary. The advantage of this system is that
the amine donor alanine is recycled during the reaction and not consumed as in the reac-
tions described in Section 2.4.3.1.1.1.1.3. However, to date, only l-alanine dehydrogenases
2.4.3 ø-Transaminases 389
are known, implying that only l-alanine can be recycled. Examples of amines (S)-9 prepar-
ed using this approach are given in Scheme 8.[17,23,32,33]
O ω-transaminase NH2
PLP
R1 R1
(S)-9
NH2 O
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CO2H CO2H
L-AlaDH
H2O NH4+
NADH NAD+
FDH or
formate CO2
GDH
or or
glucose gluconolactone
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[33]
ArS 64 >99
[33]
CV 52 94
a
Origin of enzymes: VF = Vibrio fluvialis; PD = Paracoccus denitrificans;
PF = Pseudomonas fluorescens; BM = Bacillus megaterium; AD = Alcali-
genes denitrificans; CV = Chromobacterium violaceum; ArS = Arthro-
bacter citreus; ATA-113 = commercial enzyme available from Codexis.
b
Conversion determined by achiral GC-FID measurement.
c
Values in parentheses are values obtained for reactions in the pres-
ence of DMSO (15 vol%) as cosolvent.
d
Enantiomeric excess determined by GC on a chiral stationary phase
after derivatization to the corresponding acetamide.
2.4.3.1.1.1.2.2 (R)-Amination
O ω-transaminase NH2
PLP
R1 R1
(R)-10
NH4+ H2O
NH2 O NH2
L-AlaDH
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NADH NAD+
FDH or
formate CO2
GDH
or or
glucose gluconolactone
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after derivatization to the corresponding acetamide.
Although, as described in the previous sections, the removal of pyruvate allows the unfa-
vorable equilibrium to be shifted toward product formation, the requirement of addition-
al enzymes besides the ø-transaminase increases the complexity of the amination in gen-
eral. Consequently, isopropylamine seems to be a suitable alternative to alanine because
it is achiral, volatile, and inexpensive. The equilibrium is shifted either by using a large
excess of isopropylamine[17,18] or by removing the oxidized coproduct (acetone) via a gas
sweep,[16] under reduced pressure,[34] or using a multienzyme network.[35] Although isopro-
pylamine has multiple advantages over alanine, this amine source is, however, accepted
only by a limited number of ø-transaminases. This limitation can be circumvented by em-
ploying rational protein design to develop novel catalysts with the ability to accept this
amine source.[16] The multigram-scale synthesis of sitagliptin [12, R1 = 2-oxo-2-{3-(trifluo-
romethyl)-5,6-dihydro-[1,2,4]triazolo[4,3-a]pyrazin-7(8H)-yl}ethyl; R2 = 2,4,5-F3C6H2CH2], a
therapeutically useful drug for the treatment of diabetes mellitus type 2, is based on the
amination of prositagliptin ketone [11, R1 = 2-oxo-2-{3-(trifluoromethyl)-5,6-dihydro-
[1,2,4]triazolo[4,3-a]pyrazin-7(8H)-yl}ethyl; R2 = 2,4,5-F3C6H2CH2] using isopropylamine as
amine source (Scheme 10).[16] By using directed evolution techniques, a solvent and tem-
perature tolerant catalyst (ArRmut11) has been developed which is ideal for the amina-
tion of the bulky ketone precursor. The amination proceeds smoothly at high substrate
concentration (200 g/L), satisfying the catalyst requirement for drug production in terms
of substrate/catalyst ratio (» 2600 mol/mol) and turnover frequency (163 h–1),[36] giving the
enantiopure amine in excellent overall yield. Moreover, the evolved biocatalyst (ArR-
mut11) has also been successfully employed for the preparation of the fluorinated
amine 12 (R1 = Ph; R2 = CF3), which is not accessible by traditional chemical reductive am-
ination approaches. Perfect stereoselectivity is also observed for the preparation of
1-phenylethylamine (12, R1 = Ph; R2 = Me), however, a depletion of the enantiomeric ex-
cess is detected for substrates bearing long flexible chains such as phenoxy- and methoxy-
acetone derivatives 11 (R1 = CH2OPh; R2 = Me and R1 = CH2OMe; R2 = Me, respectively).[22] A
dynamic protocol has been established for the amination of a panel of racemic Æ-alkylated
2.4.3 ø-Transaminases 393
-oxo esters {e.g., 11 [R1 = Me; R2 = (S)-CH(Et)CO2Et]} using a set of commercially available
ø-transaminases.[37] As a general trend, excellent conversions and enantiomeric excesses
are achieved for acyclic derivatives, though with moderate diastereoselectivity except in a
few cases.[5]
ω-transaminase
O NH2 PLP NH2 O
+ +
R1 R2 R1 R2
11 12
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R1 R2 ø-Transaminasea Conditions Conversion ee Ref
(%) (%)
F3C
[16]
Ph CF3 ArRmut6 30% DMSO, 99 >99
pH 8.5, 60 8C, 24 h
[22]
Ph Me ArRmut11 20% DMSO, pH 11, 85 >99
45 8C, 24 h
[22]
CH2OPh Me ArRmut11 20% DMSO, pH 11, >99 80
45 8C, 24 h
[22]
CH2OMe Me ArRmut11 20% DMSO, pH 11, >99 >99
45 8C, 24 h
Et
Me TA-P1-A06 2.5% DMSO, 87 >99b [37]
(R)-3-Amino-1-[3-(trifluoromethyl)-5,6-dihydro[1,2,4]triazolo[4,3-a]pyrazin-7(8H)-yl]-4-
(2,4,5-trifluorophenyl)butan-1-one [12, R1 = 2-Oxo-2-{3-(trifluoromethyl)-5,6-dihydro-
[1,2,4]triazolo[4,3-a]pyrazin-7(8H)-yl}ethyl; R2 = 2,4,5-F3C6H2CH2; Sitagliptin];
Typical Procedure:[16]
The reaction was run in a vessel fitted with a mechanical stirrer, temperature probe, pH
probe, and base addition line. The pH was kept between 8.4 and 8.6 by addition of 4 M aq
iPrNH2. H2O was added to the vessel (1.92 L), followed by Et3N (109 mL, 0.82 mol,
0.33 equiv), and 4 M aq iPrNH2 (1.64 L, 6.56 mol). The pH was adjusted to 8.5 using 12 M
aq HCl (424 mL). The reactor was then charged with PLP (6.7 g, 0.027 mol) followed by
ø-transaminase ArRmut11 (40 g). The vessel was placed on the reactor block with the tem-
perature probe, base addition line, and pH probe, and the mechanical stirrer was set to
400 rpm. DMSO (2.22 L) was added and the reactor was heated to 45 8C. After the temper-
ature had stabilized, the pH control loop was turned on and adjusted to pH 8.5. At this
point, stirring was increased to 600 rpm, but tip speed was kept below 2 m/s to avoid vor-
texing. Then, the ketone substrate 11 [R1 = 2-oxo-2-{3-(trifluoromethyl)-5,6-dihydro-
[1,2,4]triazolo[4,3-a]pyrazin-7(8H)-yl}ethyl; R2 = 2,4,5-F3C6H2CH2] as hemihydrate (1.0 kg,
2.46 mol) was dissolved in DMSO (1.11 L) and this soln was added to the reactor over
2–3 h. The reactor was stirred at 45 8C for another 13 h with acetone removal being accom-
plished with 300 Torr vacuum and 2 fps N2 sweep. After 15 h (total reaction time), the re-
action was at 90–95% conversion as judged by HPLC analysis. Then, the pH loop control
was turned off and 12 M aq HCl was added until pH 2–3. The mixture was then aged at
45 8C and 1000 rpm for 2 h. The batch was cooled to rt and iPrOH (3 L) was added, followed
by iPrOAc (3 L). The pH of the aqueous phase was then adjusted to 11 with 19 M aq NaOH.
The mixture was shaken at 20–45 8C (heat may be used to break the emulsion) and then
allowed to settle and separate. The organic phase was set aside and the aqueous layer was
extracted with an iPrOH/iPrOAc mixture (1:4; 3 L). The combined organic extracts were
washed with brine (pH 11; 3 L) and the soln was assayed for yield: 872–902 g (87–90%).
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The amination of ketones followed by spontaneous ring-closure reaction of the amine
moiety with an ester, or by another nucleophilic substitution, provides straightforward
access to complex heterocyclic compounds without requiring the isolation or purification
of the unstable intermediates. Moreover, isopropylamine (as the amine donor) can be pro-
vided at low concentration because the irreversible cyclization step drives the reaction to
completion. Using this approach, the amination of ethyl 5-oxohexanoate (Table 1, entries
1 and 2) has been reported at a concentration of 50 g/L.[26] The spontaneous cyclization of
the so-obtained amino ester affords 6-methylpiperidin-2-one, a valuable building block
for the preparation of natural products. Furthermore, the amination of a chlorinated ke-
tone (entry 3) using an engineered enzyme as catalyst enables the efficient synthesis of a
pharmaceutically relevant pyrrolidine.[16] Finally, the multigram chemoenzymatic syn-
thesis of a precursor of Suvorexant, a potent orexin receptor antagonist bearing a diaze-
pane moiety for the treatment of primary insomnia, is achieved by this method (entry 4).
The amination of the ketone precursor directly affords the diazepane ring in good yield
through a spontaneous ring-closure reaction.[38]
2.4.3 ø-Transaminases 395
ω-transaminase
O PLP NH2 spontaneous R1
∗
R1 R2 R1 R2 N
H
NH2 O
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O
[26]
1 ATA-117 >90 >99
CO2Et O N
H
O
[26]
2 ATA-114 >90 >99
CO2Et O N
H
O HN
Cl [16]
3 ArRmut6 57 >99
F F
MsO HN
O
N N
[38]
4 ArRmut11 62 >99
N O N O
Cl Cl
a
Origin of enzymes: ArRmut11 = Arthrobacter sp. round 11 mutant; ArRmut6 = Arthrobacter sp.
round 6 mutant; ATA-114 = Codex transaminase screening kit; ATA-117 = Codex transaminase
screening kit.
this time the slurry was filtered and dried with a stream of N2 over the filter pad, provid-
ing the product as a colorless crystalline solid; yield: 7.80 g (62%); >99% ee; [Æ]D25 –4.67 (c 1,
MeOH).
The excellent compatibility between different biocatalysts opens the possibility of com-
bining enzymatic reactions to develop efficient one-pot cascade reactions. This concept
becomes particularly interesting when the reaction intermediates are unstable or diffi-
cult to obtain through alternative synthetic procedures.[1] For instance, the coupling of
two biocatalytic steps has been successfully used for the preparative-scale (15 mmol) pro-
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duction of (R)- and (S)-homoalanine (15), which are valuable building blocks for the prep-
aration of antibiotics. [39] The coupled system avoids the handling of the expensive and un-
stable oxo acid 14 which is produced from readily available l-threonine (13) using a threo-
nine deaminase as catalyst. Moreover, the reductive amination of the oxo acid affords the
l- or d-isomers, depending on the ø-transaminase used [ArRmut11 (Arthrobacter sp. round
11 mutant) or OATA (ø-transaminase from Ochrobactum anthropi)], in good isolated yield
(78%) and enantiopure form (Scheme 11).
NH2
threonine deaminase
CO2H
− NH3
OH
13
OATA
PLP, iPrNH2 NH2
buffer (pH 7), 37 oC
CO2H ArRmut11
PLP, iPrNH2 NH2
buffer (pH 7), 37 oC
14 CO2H
78%; >99% ee
(R)-15
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nine (16, R1 = CH2F; R2 = CO2H) can be readily synthesized through amination of 3-fluoro-
pyruvate using Vibrio fluvialis ø-transaminase as catalyst.[40] The reaction must be per-
formed in a two-phase system to avoid inhibition of the enzyme by acetophenone. This
approach is also suitable for the multigram preparation of valuable drug precursors
such as (S)-1-(5-fluoropyrimidin-2-yl)ethanamine (16, R1 = 5-fluoropyrimidin-2-yl; R2 =
Me), a building block for the preparation of the kinase inhibitor AZD1480.[41] Inhibition
effects observed at high substrate concentration (0.35 M) are avoided by adding toluene
as a second phase.
ω-transaminase
O NH2 PLP NH2 O
+ +
R1 R2 Ph ∗ R1 ∗ R2 Ph
16
N [41]
Me S VF 25% toluene, 99 >99 S
N
pH 7.5, 29 8C
F
a
Origin of enzymes: ArRmut11 = Arthrobacter sp. round 11 mutant; OATA = Ochrobactum anthropi; VF = Vibrio
fluvialis.
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0.53 mol) in 2-methyltetrahydrofuran (544 mL). The biphasic mixture was stirred at 40 8C
for 2 h. Harborlite (12.0 g) was added, and stirring was continued for an additional 15 min.
The mixture was filtered and the filter bed was washed with a mixture of H2O (136 mL)
and 2-methyltetrahydrofuran (136 mL). The aqueous layer was extracted with 2-methyltet-
rahydrofuran (272 mL). The organic layers were combined and distilled at atmospheric
pressure until the internal temperature reached 98 8C (760 mL distillate collected). The re-
sidual soln was treated with a 5.55 M soln of HCl in iPrOH (238 mL, 1.32 mol). The mixture
was heated to 40 8C for 18 h, whereby the amine hydrochloride precipitated. Heptane
(204 mL) was added over 15 min and the resulting suspension was stirred at 20 8C for
16 h. The mixture was filtered and the isolated amine hydrochloride was washed with
2-methyltetrahydrofuran (102 mL) and dried under reduced pressure; yield: 68.2 g (77.1%).
ω-transaminase
O PLP, t-BuOMe
NH2
R1 R2 R1 ∗ R2
17 >99% ee
NH2 O
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[42]
CH2OMe Me 3 2 ArR >99 >99 R
[42]
CH2OMe Me 3 4 ArS >99 >99 S
[42]
CH2CO2Et Me 3 24 ArR >99 >99 R
[42]
CH2CO2Et Me 3 12 ArS 88 >99 S
[42]
Ph CH2OH 3 24 ArR 98 >99 S
[42]
Ph CH2OH 3 72 CV 7 >99 R
[42]
CH2OPh Me 3 9 ArR >99 >99 R
[42]
CH2OPh Me 3 24 CV >99 >99 S
[42]
Ph Me 3 72 ArR 43 >99 R
[42]
Ph Me 3 72 ArS 39 >99 S
[42]
(CH2)2Ph Me 3 72 ArR 48 >99 R
[42]
(CH2)2Ph Me 15 24 ArS 75 >99 S
[42]
(CH2)5Me Me 3 72 ArR 41 >99 R
[42]
(CH2)5Me Me 3 72 ArS 44 >99 S
a
Origin of enzymes: ArR = R-selective ø-transaminase from Arthrobacter sp. (1.60 U/mg of
crude preparation); CV = S-selective ø-transaminase from Chromobacterium violaceum (2.04
U/mg of crude preparation); ArS = HisTag Arthrobacter citreus (0.74 U/mg of crude prepara-
tion).
Regioselective transformations are highly desired in organic synthesis because they allow
elaborate protecting group strategies and additional purification steps to be avoided. For
example, various substituted 1,5-diketones 18 with R1 being either a linear or branched
alkyl, aryl, or cyclic residue are regioselectively converted into the enantiopure 2,3,4,5-
tetrahydropyridines (˜1-piperideines) 19 by employing enantiocomplementary ø-trans-
aminases (Scheme 14). The enzymatic reductive amination proceeds almost exclusively
at the sterically less demanding (ø-1) carbonyl residue to afford an amino ketone, which
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cyclizes spontaneously to the corresponding six membered imine 19. Notably, even bare-
ly soluble substrates can be transformed by the addition of organic solvents such as di-
methylformamide or dimethyl sulfoxide.[43] Using alanine as amine donor, the equilibri-
um is shifted to the product side either by recycling the formed pyruvate to alanine via
AlaDH or reduction to lactate via LDH (see Sections 2.4.3.1.1.1.2.1 and 2.4.3.1.1.1.1). The
cyclic imines are obtained with excellent conversion and optical purity, and high regiose-
lectivity.[43–45] As the products are rather volatile and prone to racemization, it is recom-
mended that further transformations be performed immediately.
O O
R1
18
OH
ω-transaminase
NH2
buffer, PLP
NAD+, FDH
O 30 oC, 24 h
OH
O
NH2 O O NH2
∗ R1 ∗ R1
− H2O − H2O
∗ ∗
N R1 N R1
19
2.4.3 ø-Transaminases 401
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[44]
iBu BM >99 >99:1 >99 S
[44]
iBu HN >99 >99:1 >99 R
[44]
Ph PF >99 >99:1 98 S
[44]
Ph ArR >99 >99:1 >99 R
a
Origin of enzymes: CV = Chromobacterium violaceum; AT = Aspergillus terreus; VF = Vibrio fluvia-
lis; HN = Hyphomonas neptunium; ArS = Arthrobacter citreus; BM = Bacillus megaterium; PF =
Pseudomonas fluorescens; ArR = Arthrobacter sp.
b
Reaction performed in the presence of 20 vol% DMF.
c
Reaction performed in the presence of 20 vol% DMF and 5 vol% heptane.
N Pr
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Hydrochloride]; Typical Procedure:[44]
The crude soln from the biotransformation containing the corresponding cyclic imine
(S)-2-methyl-6-propyl-2,3,4,5-tetrahydropyridine [(S)-20] was treated with Pd/C (10% wt).
The mixture was stirred vigorously and a stream of H2 was bubbled through the soln for
4 h. After full conversion, which was detected via GC or GC/MS, the soln was filtered
through a small plug of Celite and cooled to 0 8C. A soln of ethereal HCl (~5 equiv) was
added. The solvent was removed and the precipitate was collected to give the product as
a colorless solid; yield: 82 mg (94%); dr (syn/anti) 99:1; mp 243–245 8C; [Æ]D20 –12.2 (c 0.5,
EtOH).
CAUTION: Solid lithium aluminum hydride reacts vigorously with a variety of substances, and
can ignite on rubbing or vigorous grinding.
Cyclic structures are often a key feature of bioactive compounds and natural products, in
particular cyclic chiral amines are interesting targets for the development of new phar-
maceuticals.
Apart from the case of cyclohexanone (22, R1 = R2 = R3 = R4 = R5 = H), which leads to achiral
cyclohexylamine (23, R1 = R2 = R3 = R4 = R5 = H),[32,52] chiral 3-substituted cyclohexylamine
derivatives 23 are prepared from ketones 22 via an enzymatic cascade utilizing ø-trans-
aminases in the key step (Scheme 16).[53] By choosing an R- or S-selective ø-transaminase,
2.4.3 ø-Transaminases 403
either enantiomer can be obtained. The amination is performed using either alanine
(LDH/GDH system, see Section 2.4.3.1.1.1.1) or isopropylamine (see Section 2.4.3.1.1.2) as
amine donor.
O NH2
ω-transaminase
PLP
R1 R1
R5 R5
R2 R2
R3 R4 R3 R4
NH2 O
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22 23
R6 ∗ R6
the anti amino ester (1S,2S)-24 with high conversions, enantiomeric excess (>99%), and
diastereomeric excess (94–96%). Scheme 17 outlines the results of a preparative-scale con-
version using TA-P1-G05 as catalyst.[37]
O NH2
ω-transaminase
CO2Et PLP CO2Et
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rac (1S,2S)-24 58%;
>99% ee; 98% de
NH2 O
O ω-transaminase NH2
PLP, pH 7.0, 30 oC
R1 R1
NH2 O
R2 R2
R2 = CO2H, Me
ø-Transaminasea
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Entry Starting Material Product Conversion ee Ref
(%) (%)
O NH2
[19,24,55,57]
1 ArS >99 >99
O NH2
[19,24,55,57]
2 ArR 14 76
O NH2
[24]
3 ArS 90 >99
MeO MeO
O NH2
[24]
4 ArRmut11 >99 >99
MeO MeO
O NH2
[22,24,56]
7 VF 22 98
O NH2
[22,24,56]
8 ArRmut11 26 >99
O NH2
[22,24,56]
9 BV 51 >99
O NH2
[24]
10 VF 56 >99
O O
Table 2 (cont.)
Entry Starting Material ø-Transaminasea Product Conversion ee Ref
(%) (%)
O NH2
[24]
11 ArRmut11 54 >99
O O
O NH2
[24]
12 ArS >99 >99
O O
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O NH2
[24]
13 AN 22 >99
O O
a
Origin of enzymes: ArS and ArR = S- and R-selective enzymes from Arthrobacter; ArRmut11 = variant of (R)-Ar-
throbacter sp.; VF = Vibrio fluvialis; AN = Aspergillus niger; BV = Burkholderia vietnamiensis.
In addition to mono- and bicyclic ketones, ø-transaminases have also been applied for the
amination of multicyclic ketones. For example, a very efficient route for the synthesis of
(R)-ramatroban, a pharmaceutical used in the treatment of allergic rhinitis and asthma,
has been established employing an ø-transaminase for the asymmetric key step.[58] The
developed route gives the desired R-enantiomer with excellent isolated yield of up to
95% and an enantiomeric excess of >97% (Table 3, entries 1–3), replacing a chemoenzy-
matic four-step synthesis using lipases or oxidoreductases.[59] A further very interesting
example is the chemoenzymatic multistep synthesis of the CRTH2 antagonist MK-7246.
Here, a chemical route (18 steps, ~10% overall yield) was optimized by reducing the num-
ber of steps to eight, mainly due to the direct installation of the required chiral amine
2.4.3 ø-Transaminases 407
functionality from the prochiral ketone precursor (entry 4).[60] This enabled a more scala-
ble and cost-efficient manufacturing route to MK-7246.
ω-transaminase
O PLP
NH2
R1 R2 R1 ∗ R2
NH2 O
3 3
R R
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Entry Starting Material R3 ø-Transaminasea Product Yield (%) ee (%) Ref
O NH2
[58]
1 Ph ArRmut11 96 >97
N N
H H
O NH2
N N
H H
O NH2
[58]
3 CO2H CV 62 >97
N N
H H
O H2N
N N
[60]
4 Me CDX-017 76 >99
EtO2C EtO2C
a
Origin of enzymes: ArRmut11 = variant of R-selective ø-transaminase from Arthrobacter sp.; ArS = Arthrobacter
citreus; CV = Chromobacterium violaceum; CDX-017 = R-selective ø-transaminase variant available from Codexis.
b
Only conversion was reported.
control (pH 8.3–8.5) by adding 4 M aq iPrNH2. The mixture was cooled to rt and adjusted to
pH 7.0 using MsOH (0.45 mL), and then cooled to 12 8C, acidified to pH 2.0 with another
portion of MsOH (0.2 mL), and kept for 3 h at 12 8C and 1000 rpm. The mixture was fil-
tered, rinsing with a chilled mixture of H2O/DMSO/MsOH (60:40:1; 3 10 mL). The filtrate
was washed with cyclopentyl methyl ether (40 mL) and the organic layer was discarded.
Cyclopentyl methyl ether (70 mL) was added to the aqueous layer and the mixture was ad-
justed to pH 10.5 using 5 M aq NaOH (5.5 mL). The layers were separated and the aqueous
layer was extracted with cyclopentyl methyl ether (40 mL). The combined organic layers
were washed with sat. aq NaCl (20 mL), concentrated, and flushed with cyclopentyl meth-
yl ether (24 mL). The soln was then cooled to 0 8C and seeded with the product salt (24 mg),
and a 5.5 M soln of HCl in iPrOH (1.76 mL) was added over 2 h until a nominal pH of 6.0 was
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reached. The slurry was further aged at 0 8C for 1 h, filtered, washed with cyclopentyl
methyl ether (2 5 mL), and dried at rt under reduced pressure to give the product as a
cream powder; yield: 2.27 g (76%); >99% ee.
Steroids and steroidal compounds are further interesting classes of target molecules. Ste-
roids have, based on their natural function as secondary metabolites controlling a variety
of biological processes, enormous potential as pharmaceuticals. Indeed, among the 200
top-selling drugs in 2010, 13% were steroids and derivatives thereof.[61]
For instance, the ø-transaminases ATA-113 and ATA-117 and the ø-transaminase
from Vibrio fluvialis have been successfully applied for the preparation of amine steroid
derivatives giving both enantiomers in moderate conversions (37–49%, Table 4, entries
4–6).[62] In further examples, the ø-transaminase ArRmut11 has been employed for the
preparation of various 17-Æ-amino steroids, compounds recently highlighted as potent in-
hibitors of steroid sulfatase, a target in the treatment of breast cancer.[63–66] In this ap-
proach, steroids can be prepared on a preparative scale with high isolated yields (83–
89%) and excellent selectivity (entries 1–3).[67]
Table 4 Asymmetric Reductive Amination of Steroids and Related Compounds with ø-Transaminases[62,67]
ω-transaminase
O PLP
NH2
R1 R2 R1 R2
NH2 O
R3 R3
O NH2
H H
1 Me ArRmut11 83 17-Æ-Rb [67]
H H H H
HO HO
O NH2
H H
2 Me ArRmut11 85 17-Æ-Rb [67]
H H H H
HO HO
2.4.3 ø-Transaminases 409
Table 4 (cont.)
Entry Starting Material R3 ø-Trans- Product Yield Config Ref
aminasea (%)
O NH2
H H
3 Me ArRmut11 89 17-Æ-Rb [67]
H H H H
HO HO
H H
Cbz Cbz
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N N
H H
H H
O O
H H
O H2N
Cbz Cbz
N N
H H
H H
O O
H H
O H2N
Cbz Cbz
N N
H H
H H
O O
H H
O H2N
a
Origin of enzymes: VF = Vibrio fluvialis; ArRMut11 = R-selective ø-transaminase variant from Arthrobacter sp.;
ATA-113 and ATA-117 are commercial enzymes available from Codexis.
b
dr 1:99.
c
Only conversions determined by HPLC were reported.
0.17 mmol) in DMF (7 mL) was added. The reaction was started by addition of freeze-dried
E. coli cells containing overexpressed ArRmut11 (500 mg) and shaken at 45 8C. After 3 d,
the reaction was stopped by addition of 2 M aq HCl (6 mL) and the mixture was extracted
with EtOAc (2 10 mL). The remaining aqueous phase was treated with 10 M aq NaOH
(1 mL) and extracted again with EtOAc (4 10 mL). The combined organic layers were
dried (Na2SO4), filtered, and concentrated under reduced pressure. The product, a brown-
ish solid, was purified by flash column chromatography (CH2Cl2/MeOH/Et3N 90:9:1). The
product was obtained as a colorless, amorphous solid; yield: 43.7 mg (89%); [Æ]D25 –12.5 (c
0.8, MeOH).
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The amination of aldehydes has been investigated mainly in the course of the character-
ization of novel transaminases during the determination of their substrate scope and ki-
netic studies.[28,52,68–70] In general, as to be expected, aldehydes are more active amine ac-
ceptors than ketones or oxo acids.[68,71] However, the ø-transaminase-catalyzed amination
of aldehydes on a preparative scale has been less investigated compared to the amination
of ketones.
In one, preparative, example a ª-aminobutyric acid (GABA) derivative was accessed,
which is a key precursor for a series of potent drugs for the treatment of various diseases
concerning the central nervous system (e.g., epilepsy, Huntingtons and Parkinsons dis-
ease).[72] In the first report of dynamic kinetic resolution mediated by ø-transaminases, a
chemoenzymatic concept was employed for the synthesis of the GABA precursors (R)- and
(S)-4-phenylpyrrolidin-2-one (27) (Scheme 18).[73] In this approach, the chiral ª-amino ester
26 is formed by transaminase-catalyzed amination of racemic aldehyde rac-25. The ami-
nation product 26 cyclizes spontaneously to the corresponding lactam 27, which can be
transformed into a GABA derivative by subsequent ring opening. Due to the spontaneous
racemization of substrate 25, the reaction proceeds via dynamic kinetic resolution and
hence complete conversion can be obtained.
ω-transaminase
PLP, buffer (pH 7) H
H O H 2N O
O 15% DMSO O N
30 oC, 24 h
∗
Ph OEt Ph ∗ OEt
Ph
rac-25
26 27
NH2 O OH
LDH
OH OH OH
NADH
O O recycling O
ø-Transaminasea Cosolvent (vol %) Conversionb (%) Yield (%) eec (%) Config Ref
[73]
VF DMSO (10) 98 90 6 S
[73]
ATA-114 DMSO (10) 99 80 45 S
[73]
ATA-117 none 98 93 61 R
[73]
ATA-117 DMSO (10) >99 95 65 R
a
Origin of enzymes: VF = Vibrio fluvialis; ATA-114 and ATA-117 are commercial enzymes.
b
Determined by GC.
c
Determined by HPLC on a chiral stationary phase.
2.4.3 ø-Transaminases 411
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One of the most attractive routes to prepare amines is the catalytic amination of alcohols,
because alcohols are often readily available, e.g. from renewable sources, on a large
scale.[74] Moreover, ideally external reducing or oxidizing reagents may be avoided as
both alcohol substrate and product amine are in the same oxidation state.[75] Even though
no enzyme is capable of catalyzing the direct amination, various multienzyme one-pot
cascades have been developed to afford the corresponding amines.
For instance, a redox-self-sufficient multienzyme cascade has been designed based
on the “borrowing hydrogen” approach for the amination of primary alcohols without re-
quiring external redox equivalents.[76] In the first step, an alcohol dehydrogenase (ADH)
catalyzes the oxidation of the primary alcohol to the corresponding aldehyde, giving
one equivalent of the reduced cofactor NADH. Next, the ø-transaminase performs the am-
ination of the intermediate aldehyde at the expense of l-alanine. Finally, alanine dehydro-
genase (AlaDH) connects the oxidation and reductive amination step by consuming NADH
obtained in the oxidation for the regeneration of l-alanine from pyruvate. Primary amines
bearing aliphatic or even bulkier aromatic moieties are obtained with excellent conver-
sion from the corresponding alcohols (Table 5). Even more interesting is the application
of this multienzyme network for the diamination of 1,ø-diols which provides straightfor-
ward access to 1,ø-diamines, valuable building blocks for the preparation of polyamide
derivatives (entries 4 and 5). In this particular case, the synthesis of decane-1,10-diamine
has been performed on a preparative scale. Due to the poor solubility of the diol, the ad-
dition of 10% 1,2-dimethoxyethane is required. The desired diamine is obtained in good
yield without detecting traces of the intermediate aldehyde or over-oxidation products.
Alternatively, the intermediate aldehyde can be produced using an oxidase, but in this
case the efficiency is lower because it is necessary to add external redox equivalents.[77]
Table 5 ø-Transaminase-Catalyzed Redox-Neutral Cascade for the Amination of Primary and Secondary
Alcohols[76,78,79]
R1 R2
NH2
ADH ω-transaminase
OH
NADH
O
NAD+ AlaDH O
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OH
OH NH2
NH3 H2O O
R1 R2 R1 R2
Entry Starting Material ADHa ø-Transaminaseb Product Conversion (%) Yield (%) Ref
OH NH2
1 hT CV >99 –c [76]
5 5
2 Ph OH hT CV Ph NH2 87 –c [76]
Ph OH Ph NH2
3 hT CV >99 –c [76]
3 3
HO OH H2N NH2
4 hT CV >99 –c,d [76]
8 8
HO OH H2N NH2
5 hT CV 94 70d [76]
10 10
OH NH2
[78]
6 A BM 54 35
5 5
HO H H2N H
O O
7 LR PD (L417M) 7 –c [79]
O O
H OH H OH
a
Origin of alcohol dehydrogenases: hT = Bacillus stearothermofilus; A = Rhodococcus ruber; LR = Leifsonia aquatica.
b
Origin of ø-transaminases: CV = Chromobacterium violaceum; BM = Bacillus megaterium; PD (L417M) = Paracoccus
denitrificans L417M variant.
c
Not isolated.
d
10% DME was added due to solubility reasons.
enantiomeric excess (78%) compared with the previous results obtained in the amination
of octan-2-one (>99% ee).[78] This depletion in enantiomeric excess is attributed to the con-
tinuous back and forward reactions of the system. The diamination of cyclic secondary
alcohols such as isosorbide has also been studied, however, in this case the transforma-
tion gives the (2S,5S)-configured amino alcohol (entry 7) with only 7% conversion.[79]
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each dissolved in H2O (500 L), additional H2O (3.12 mL), ADH (4 mL, 5 U), ø-transaminase
CV (4 mL, 4 U), and AlaDH (300 mL, 5 U) were added. After the mixture had been shaken at
20 8C and 120 rpm (orbital shaker, Infors Unitron) for 22 h, the product was separated
from the mixture and purified through a weak acid cation exchanger; yield: 121 mg (70%).
H 2N H2N O
ω-transaminase
PLP
N N + N
R1 R1 R1
n n n
rac-28 (R)-28 29
O O
OH OH
O NH2
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R1 n ø-Transaminasea Conversion (%) eeb (%) Ref
[85]
H 1 Ad 52 89
[85]
H 1 VF 55 86
[85]
Bn 1 Ad 50 81
[85]
Bn 1 VF 49 77
[85]
Boc 1 Ad 50 98
[85]
Boc 1 VF 50 90
[85]
Cbz 1 Ad 51 99
[85]
Cbz 1 VF 50 >99
[85]
H 2 Ad 54 72
[85]
H 2 VF 54 76
c [85]
Boc 2 Ad 55 97
c [85]
Boc 2 VF 55 96
a
Origin of enzymes: Ad = Alcaligenes denitrificans; VF =
Vibrio fluvialis.
b
R-Enantiomer was the main product.
c
Assumed to have R configuration.
sumed in the first step is recycled in situ by an amino acid oxidase (DAAO). To improve the
deracemization approach of mexiletine described above, immobilized ø-transaminase
has been employed, with the enzyme immobilized in a sol-gel/Celite matrix. In contrast
to free enzymes, the sol-gel immobilized ø-transaminases are easily removable by centri-
fugation or filtration after the first step.[86] The sol-gel entrapment represents an easy and
effective way to prepare high-performance amines. Using this approach (S)-mexiletine
[(S)-30] is obtained in enantiomerically pure form and up to 95% isolated yield.[20]
NH2
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O
rac-30
O2
CO2H
(R)-ω-transaminase
DAAO PLP, pH 7.0, 30 oC
NH2
CO2H
H2O2
O NH2
O O
+
31 (S)-30
+
NH4
NH2
CO2H
(S)-ω-transaminase
NADH
L-AlaDH PLP, pH 7.0, 30 oC
recycling
CO2H
H2O
NH2
O
ω-transaminase
amine acceptor
NH2 NH2 O
PLP, pH 7.0, 30 oC
1 2 1 2 + 1
R R R R R R2
rac
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enantiocomplementary ω-transaminase
NH2
amine donor, PLP, pH 7.0, 30 oC
R1 R2
b c [20]
Et Me ATA-117 ATA-113 >99 >99 S
Et Me ATA-114 ATA-117 >99b >99c R [20]
b c [20]
CH2OMe Me ATA-117 ATA-113 >99 >99 S
CH2OMe Me ATA-114 ATA-117 >99b 96c R [20]
b c [20]
Cy Me ATA-117 ATA-113 62 >99 S
b c [20]
Cy Me ATA-114 ATA-117 88 >99 R
b c [20]
Ph Me ATA-117 ATA-113 60 >99 S
b c [20]
Ph Me ATA-114 ATA-117 84 >99 R
Ph Et ATA-117 ATA-113 82b >99c S [20]
b c [20]
Ph Et ATA-114 ATA-117 72 >99 R
(CH2)2Ph Me ATA-117 ATA-113 >99b 5c S [20]
b c [20]
(CH2)2Ph Me ATA-114 ATA-117 >99 >99 R
b c [86]
(CH2)2Ph Me ATA-117 ATA-114 90 >99 S
b c [20,21,86]
2,6-Me2C6H3OCH2 Me ATA-117 ATA-113 >99 >99 S
b c [20,21,86]
2,6-Me2C6H3OCH2 Me ATA-114 ATA-117 81 >99 R
2,6-Me2C6H3OCH2 Me ATA-117 CV 97b >99c S [21]
b c [21]
2,6-Me2C6H3OCH2 Me ATA-117 BM 77 95 S
2,6-Me2C6H3OCH2 Me ATA-117 VF >99b 96c S [21]
b c [21]
2,6-Me2C6H3OCH2 Me CV ATA-117 >99 >99 R
2,6-Me2C6H3OCH2 Me ATA-113 ATA-117 97b >99c R [21]
d d,e [87]
4-HOC6H4 Me (S)-PO (R)-MV >99 >99 R
d d,e [87]
4-HOC6H4 Me (S)-PO (R)-NF >99 >99 R
4-FC6H4 Me (S)-PO (R)-MV 82d >99d,e R [87]
d d,e [87]
4-FC6H4 Me (S)-PO (R)-NF 71 >99 R
3,4-F2C6H3 Me (S)-PO (R)-MV 98d >99d,e R [87]
d d,e [87]
3,4-F2C6H3 Me (S)-PO (R)-NF 87 >99 R
3,5-F2C6H3 Me (S)-PO (R)-MV 87d >99d,e R [87]
d d,e [87]
3,5-F2C6H3 Me (S)-PO (R)-NF 94 >99 R
2.4.3 ø-Transaminases 417
d d,e [87]
4-Tol Me (S)-PO (R)-MV >99 >99 R
4-Tol Me (S)-PO (R)-NF 89d 81d,e R [87]
d d,e [87]
3-Tol Me (S)-PO (R)-MV 98 >99 R
d d,e [87]
3-Tol Me (S)-PO (R)-NF 79 >99 R
d d,e [87]
3-NCC6H4 Me (S)-PO (R)-MV >99 >99 R
d d,e
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[87]
3-NCC6H4 Me (S)-PO (R)-NF 77 >99 R
a
Origin of enzymes: CV = Chromobacterium violaceum; BM = Bacillus megaterium; VF = Vibrio flu-
vialis; PO = Polaromonas sp.; MV = Mycobacterium vanbaalenii; NF = Neosartorya fischeri; ATA-
113, ATA-114, and ATA-117 are commercial enzymes.
b
Conversion determined by achiral GC-FID measurement.
c
ee determined by GC on a chiral stationary phase after derivatization as the corresponding
acetamides or trifluoroacetamides.
d
Conversion and ee were determined by HPLC using a Crownpak CR(+) column. Conversion is
the percentage of the remaining amine concentration to the initial amine concentration.
e
ee determined using a C18 symmetry column after GITC derivatization.
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