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Conformational Analysis
Conformational Analysis
Cycloalkane conformers, while looking at first difficult to draw, are really quite simple. Let’s use
chair cyclohexane as an example:
A B C D
Start by drawing two parallel, but offset lines (A). Put a nose on it (B), followed by
a tail (C). Finally, add in the axial and equitorial bonds (D). When transcribing groups e a
from a cyclohexyl structure to the chair conformation, remember the relationship of a a e
e
axial and equitorial groups (and don’t mix this up with cis and trans!!). Practice will e a
e a
make perfect! a e
CH3 H
I H
II
To calculate the relative percentages or ratios of I to II:
• Find the A values for the groups involved. Here only methyl need be considered and it has
an A value of +1.7 kcals.
• Determine the sign of the A value for the equlibrium you are examining. For the example
above, the sign of the A value has to be negative (since AMe=+1.7 and the reaction as shown
above is going from eq to ax).
• Calculate the Keq using the equation above at 23°C (R= 1.986x10-3 Kcal/°K and T is in
[II] [II]
Kelvin [°K=273 + °C]). So, A = RT ln or -1.7= (1.986x10-3)(300)ln . Multiplication
[I] [I]
[II]
and division gives ln =-2.85; solving for the ratio (i.e. taking the antilog) gives
[I]
[II]
=0.058. This says that there is about 17 times more of conformer I than II at any given
[I]
time (or there is only about 6% of II in the equlibrium at any given time). This result should
make sense based on the A values.
Thats all! It really is simple (unless your math skills are poor) as long as you remember the
correct sign of the A value. What about multiple groups? They are handled in the same
manner:
Cl
CH3
H
CH3 H
Cl
I H
II
H
Cl has an A value of 0.43 and CH 3 has an A value of 1.7. A values are additive so:
Atotal=ACl+(-AMe)=0.43+(-1.7)=-1.27.
[II]
Substituting this into the equation (and using 23°C) gives a ratio of =0.119. This says that
[I]
there is about 8.3 times more of conformer I than II at any given time (or there is only about
12% of II in the equlibrium at any given time). Notice how the addition of another group
changes things? On your own, calculate equlibrium constants and relative ratios for the
equlibrium conformation concentrations one would expect for the following:
1-t-butylcyclohexane; cis 1,3-dimethylcyclohexane; trans 1,4-dihydroxycyclohexane; and
NH2
CH3
H H
Cl
H
Standard A Values (kJ)
H
R = 8.314 x 10-3 kJ/°K
Note: A is defined as a positive value when going from axial to equitorial
H
R = 1.986 x 10-3 kcal/°K
Note: A is defined as a positive value when going from axial to equitorial