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Received 19 November 2002; received in revised form 27 August 2003; accepted 14 October 2003
Abstract
In France, breeding value estimations for horses are calculated according to a BLUP animal model fitted to the log of annual
earnings in jumping, trotting races, flat races, steeplechases and hurdle races.
The regression b p/I0 and correlation R between the breeding value estimation at the moment of conception with the mean of
future performances P make it possible to check the practical efficiency of the method of indexation used.
The expected regression is one and the expected correlation depends on heritability and the mean of the determination
coefficient of the index I0. The results are the following.
The situation appears to be suboptimal in the case of jumping but improvements are certainly possible in the case of races.
The obtained results, however, confirm the usefulness of these tools for trotting and flat races. The case of steeplechases and
hurdle races is not as effective mainly because of the low precision of the estimations. Other predictors of performance, BLUP
for yearlings or at 3 years of age for jumpers, confirm this first analysis and the results, age per age, are detailed in the text.
D 2003 Elsevier B.V. All rights reserved.
Keywords: Horse; Performance; Breeding value; Earnings; BLUP; Animal model; Performance prediction; Sport competitions; Races
Résumé
Efficacité pratique des indices de sélection fondés sur les gains annuels en concours hippique et dans les courses de trot et de
galop en France.
0301-6226/$ - see front matter D 2003 Elsevier B.V. All rights reserved.
doi:10.1016/j.livprodsci.2003.10.003
100 B. Langlois, C. Blouin / Livestock Production Science 87 (2004) 99–107
L’estimation de la valeur génétique des chevaux est calculée en France par un BLUP en modèle animal ajusté sur le
logarithme des gains annuels en concours hippique, en courses au trot et au galop, en plat et à l’obstacle.
La régression b p/I0 et la corrélation R entre l’estimation de la valeur génétique au moment de la conception, avec la moyenne
des futures performances P autorise à vérifier l’efficacité théorique et pratique de la méthode d’indexation mise en œuvre. La
régression attendue est de 1 et la corrélation attendue dépend de l’héritabilité et du coefficient de détermination moyen de
l’indice I0. Les résultats obtenus sont les suivants:
La situation apparaı̂t être suboptimale dans le cas du concours hippique mais des améliorations sont très certainement
envisageables dans le cas des courses. Toutefois, les résultats obtenus confirment l’utilité de ces outils de sélection pour les
courses au trot et les courses plates. Dans le cas des courses à obstacles c’est moins évident principalement à cause de la
faible précision moyenne des estimations. D’autres prédicteurs de la performance, le BLUP des yearling ou des 3 ans pour
les chevaux de sport confirment cette première analyse et les résultats âge par âge sont détaillés dans le texte.
Mots clés: Cheval/Valeur génétique/Gains/BLUP/Modèle animal/Prédiction des performances/Compétitions équestres/
Courses
D 2003 Elsevier B.V. All rights reserved.
ef-fects on different performances of the same horse, heritability, r: repeatability, v: ‘‘maternal’’ component
e = vector of residual error, X, Z, W are incidence of variance.
matrices. Relationship matrix includes all animal performers
Fixed effects were sex (female and male or geld- and nonperformers, reproducers and nonreproducers.
ing) and an age by year interaction. There were five Lines of the Z matrix corresponding to nonperformers
age classes: 4, 5, 6 – 7, 8 –10, 11 years old and more are filled with zeros.
for jumping; 2, 3, 4, 5, 6– 10 years old for trotters.
There were four age classes for gallop races: 2, 3, 4, 5 2.3. Estimating breeding values
years old and more for flat races and 3, 4, 5, 6 years
old and more for steeplechases and hurdle races. Equations obtained by minimisation of the error
These age classes were cross classified with year of variance for estimating the effects of the model
performance starting in 1972 for jumping, 1968 for described above are as follows:
trotting and 1950 for gallop races. The effects of age
with year is significant and can be explained by the 2 3
XVX XVZ XVW XVZ
policy of allocating money for age classes changes 6 7
with time and combines its effect with that of money 6 7
6 7
inflation. 6 ZVX ZVZ þ t1 A1 ZVW ZVZ 7
6 7
The ‘‘maternal’’ effect is an interpretation of the 6 7
6 7
difference found between the paternal and maternal 6 7
6 WVX WVZ WVW þ t2 I WVZ 7
components of variance. This difference is due to the 6 7
6 7
common environment of the offspring of the same 4 5
mare because, in the great majority of cases, an ZVW ZVZ ZVW ZVZ þ t3 I
2 3 2 3
owner only has one mare; the maternal effect (sensu b XVy
stricto) is confounded with the influence of the 6 7 6 7
6 7 6 7
breeder. 6 7 6 7
6 u 7 6 ZVy 7
Common environment on different performances 6 7 6 7
6 7 6 7
of the same horse represents the difference between 6 7¼6 7
6 7 6 7
the correlations between two performances (repeat- 6 m 7 6 WVy 7
6 7 6 7
ability) and heritability added to the ‘‘maternal’’ 6 7 6 7
4 5 4 5
component, and is explained by the permanent envi-
ronment of the horse after the rearing period. p ZVy
Expectation (E) and variance– covariance matrix
(V) of this linear model are: with: t 1 =(1 r)/h 2 , t 2 =(1 r)/v, t 3 =(1 r)/(r
h2 v), resolution of these equations and calculation
2 3 2 3 of the precision are shown in Tavernier (1988).
y Xb Genetic parameters for jumping have been estimated
6 7 6 7 2 u 3 2 Ar 2 0 0 0
3
by Langlois (1975b, 1980a) and Tavernier (1986).
6 7 6 7
6 7 6 7 6 7 6 u 7 Repeatability is 0.45, maternal component of variance
6u7 6 0 7
6 7 6 7 6 7 6 7
6 7 6 7 6 7 6 7 0.05, and heritability 0.20.
6 7 6 7 6m7
6 6 0 Ir2m 0 0 7
6 7 6 7 6 7 7
6
6
7
7 For trotting, the genetic parameters have been
E6 7 6
6 m 7¼6 0 7
7V6 7¼6 7 estimated by Langlois (1984a, 1986, 1989) and
6 7 6 6 7
7 6 7 6 7
6 7 6 7 6p7 6 0 0 Ir2p 0 7 [Tavernier (1989a,b). Heritability is 0.26, repeat-
6 7 6 7 6 7 6 6
7
7
6p7 6 7
0 7 4 5 4 5 ability 0.36, and maternal component of variance
6 7 6
6 7 6 7 2 0.04.
4 5 4 5 e 0 0 0 Ire
For gallop races, the genetic parameters used are
e 0 the last estimated by Langlois et al. (1996). In flat
102 B. Langlois, C. Blouin / Livestock Production Science 87 (2004) 99–107
Table 1
Percentage of born horses having earnings at a given age
Activity Breed Age (years) Career
2 3 4 5 6
Jumping SF + AA (% of the total)a – – 0.22 0.29 0.29 0.42
(0.90) (0.82) (0.76) (0.75)
Trotting TF 0.04 0.25 0.27 0.18 – 0.32
Flat races Thoroughbred 0.16 0.32 – – – 0.35
Steeplechases and hurdle races Thoroughbred – 0.08 0.10 0.07 – 0.16
Abbreviations: SF = ‘‘Selle Francßais’’; AA = Anglo-Arab; TF = ‘‘Trotteur Francßais’’.
a
Jumping competitions are open to racing breeds.
races, such as steeplechases and hurdle races, herita- where R is the precision of I (correlation of I with A)
bility is 0.25 and maternal component of variance is and c is the correlation of I with E
0.05, repeatability being 0.38 and 0.44, respectively.
rI ¼ RrA
They are in concordance with our previous results
(Langlois 1975a, 1980b). ¼ RhrP
rE ¼ erP
2.4. Expected regressions and correlations between By definition of e, which lead to
breeding value and future performances
CovðI; PÞ ¼ R2 r2A þ cRher2P
Let I be the animal model BLUP Index estimator of
and to the regression of performance P on I
the additive genetic value A of a horse for the aptitude
to a given discipline (jumping, trotting races, flat CovðI; PÞ R2 h2 r2P cRher2P
races, hurdle races and steeple chases). Let P be the bP =I ¼ ¼ 2 2 2 þ 2 2 2
r2I R h rP R h rP
measure of the horse performance:
which give after simplifications
P ¼AþE
1 e
where E is a residual error mainly due to the effect of bP =I ¼ 1 þ c
R h
environment. We can write:
If c = 0 the value of that regression is 1 and
CovðI; PÞ ¼ CovðI; AÞ þ CovðI; EÞ deviation from 1 gives a tool to evaluate c the
correlation between BLUP evaluation and environ-
CovðI; AÞ ¼ RrI rA mental effect on performance.
If such a correlation exists, it induces a genotype
and Cov(I, E) = crIrE by environment correlation s = Rc between A and E.
Table 2
Population structure
Breed SF + AA TF Thoroughbred
Activity Jumping Trotting Flat races Steeplechases
and hurdle races
Considered career (years) 4–6 2–5 2–3 3–5
Mean number of yearly performances per horse having earnings 1.9 2.3 1.4 1.6
Mean yearly number of offsprings born per stallion 9.3 14.0 6.6
Mean age of reproducers 11.6 11.3 10.6
Abbreviations: SF ‘‘Selle Francßais’’; AA = Anglo-Arab = TF = ‘‘Trotteur Francßais’’.
B. Langlois, C. Blouin / Livestock Production Science 87 (2004) 99–107 103
Table 4
Linear relationship between the annual phenotypic index and the BLUP breeding value estimation at the moment of conception and at 3 years of
age for jumping horses (all breeds) (mean for birth years 1988 and 1989)
Performance at Performance at Performance at Mean performance
4 years of age 5 years of age 6 years of age of the career
Number of horses 4203 6031 6385 9569
Regression coefficient on 0.76 1.03 1.02 0.95
the BLUP at conception
Expected correlationa 0.20 0.20 0.20 0.25
Obtained correlation 0.35 0.36 0.34 0.39
Table 5
Linear relationship between the annual phenotypic index and the BLUP breeding value estimation at the moment of conception and as yearling
for trotters (mean for birth years 1989 and 1990)
Performance at Performance at Performance at Performance at Mean performance
2 years of age 3 years of age 4 years of age 5 years of age of the career
Number of horses 808 5402 5837 3923 7029
Regression coefficient 0.60 0.76 0.89 0.75 0.79
on the BLUP at conception
Expected correlationa 0.28 0.28 0.28 0.28 0.33
Obtained correlation 0.17 0.22 0.26 0.21 0.26
For thoroughbreds in flat races, i = 0.189 which performance. Table 8 gives the estimates of these
implies a selection rate p = 0.90, also far from the 0.35 correlations from the observed data. It reveals that
presented in Table 1. they are quite low, if they exist.
The situation in steeplechases and hurdle races From a practical point of view, breeding value
gives i = 0.257 which implies a selection rate p = estimation at the moment of conception has a corre-
0.86, again far from the 0.16 presented in Table 1. lation of 0.39 with further performances in jumping
One can observe from this data that the selection and 0.33 with those of flat races. In these two cases,
bias is not as important as it first appears. We can also the correlations exceed the expected values (0.25 and
note that the other birth years and BLUP as yearling 0.27, respectively). In the case of trotting races,
or as 3 year olds gave similar results. steeplechases and hurdle races, correlations of 0.33
3. Results Table 6
Linear relationship between the annual phenotypic index and the
Tables 4 –7 give the detailed results for jumping, BLUP breeding value estimation at the moment of conception and
as yearling for flat races (mean for birth years 1991 and 1992)
trotting races, flat races and steeplechases and
hurdle races, respectively. Performance Performance Mean
at 2 years at 3 years performance
Predicting performance through breeding value of age of age of the career
evaluation at the moment of conception overevaluated
Number of horses 1928 3792 4383
the level of performance actually achieved by 5%,
21% and 20%, respectively, for jumping, trotting, and Regression 0.77 1.23 1.18
coefficient on the
steeplechases and hurdle races. On the contrary, it BLUP at conception
underevaluated by 18% in the case of flat races. The Expected correlationa 0.26 0.26 0.27
situation was similar for predicting performance at the Obtained correlation 0.21 0.31 0.33
moment of the sale (as yearlings or as 3-year-old sport
horses). For jumping it was suboptimal, as already Regression coefficient 0.79 1.25 1.21
on the BLUP as
discussed by Tavernier (1994). In the other cases, we a yearling
have either an over- or underestimation of the realised Expected correlationa 0.26 0.26 0.28
heritability or we have to take into account a correla- Obtained correlation 0.23 0.33 0.34
tion between breeding value estimation at the begin- a
Calculated from heritability, accuracy of the BLUP and the
ning of the career and further environmental effects on reduction of variance in the mean performance of the career.
B. Langlois, C. Blouin / Livestock Production Science 87 (2004) 99–107 105
Table 7
Linear relationship between the annual phenotypic index and the BLUP breeding value estimation at the moment of conception and as yearling
for steeplechases and hurdle races (mean for birth years 1990 and 1991)
Performance at Performance at Performance at Mean performance
3 years of age 4 years of age 5 years of age of the career
Number of horses 1013 1296 856 1986
Regression coefficient 0.71 0.90 0.69 0.80
on the BLUP at conception
Expected correlationa 0.20 0.20 0.20 0.22
Obtained correlation 0.13 0.16 0.12 0.15
and 0.22 were expected but only 0.26 and 0.15 are ters) can easily be explained by certain changes in
obtained, respectively. data management (anniversary date changing from
Age by age, the results showed that agreement December 31 to September 15 in 1992).
between expected and obtained values were generally Between the moment of conception and that of
better for performances obtained in older horses. Total sale, the slight increase in accuracy and in efficacy is
expression of the performance potential was probably surprising. This is due to a large dispersion of the
not regularly achieved in young animals. annual information over too many stallions. This is a
For the two birth years tested, agreement was characteristic of horse breeding structures (small
generally good. The rare exceptions (2-year-old trot- number of mated mares per stallion and great variance
of family size).
Table 8
Interpretation of the difference to 1 of the regression coefficient of 4. Discussion
the mean performance (P) on the BLUP at conception and as
yearlings or 3 years old (I ) for jumpers in terms of genetic/
environment correlation The results of this study indicate that breeding
Discipline bP/I CD c s
value estimations proposed in France to optimise the
use of earnings in competitions for breeding purposes
Jumping
Conception 0.95 0.19 0.01 0.00
are doing well for sport horses selected for jumping.
3 years old 0.93 0.22 0.01 0.00 In this case, BLUP breeding offers a correlation close
to 0.40 with the future performance of the horse. This
Trotting races is much higher than traditional methods based on the
Conception 0.79 0.31 0.07 0.04 appreciation of conformation and gaits for which
Yearling 0.81 0.30 0.06 0.04
similar efficiency was found between 0.10 and 0.15
Flat races by Langlois et al. (1978).
Conception 1.18 0.27 + 0.06 + 0.03 In the case of race horses, we can distinguish
Yearling 1.21 0.28 + 0.06 + 0.03 between flat races, where there was a correlation of
0.33 but where breeding value estimations systemat-
Steeplechases and hurdle races
Conception 0.80 0.19 0.05 0.02
ically underestimated the level of performances
Yearling 0.86 0.18 0.03 0.02 achieved, and the case of trotting races and steeple-
CD: mean coefficient of determination of the BLUP; c: estimated
chases/hurdle races with, respectively, a correlation of
correlation of the BLUP and environmental effect on performance; 0.26 and 0.15 and which overestimated the level of
s: induced genetic/environment correlation. performances. In the case of trotting, the underesti-
106 B. Langlois, C. Blouin / Livestock Production Science 87 (2004) 99–107
Langlois, B., 1996a. Méthodes objectives de sélection dans l’espèce Francßais d’après leur estimation génétique par un Blup modèle
équine. Rev. Port. Zootec. 3 (2), 13 – 29. animal. Ann. Zootech. 38, 145 – 155.
Langlois, B., 1996b. A consideration of genetic aspects of some Tavernier, A., 1989b. Breeding evaluation of French trotters ac-
current practices in thoroughbred horse breeding. Ann. Zootech. cording to their race earnings: 2. Prospects. Proceedings of the
45, 41 – 51. EAAP Symposium of the commission on horse production,
Langlois, B., Blouin, C., Tavernier, A., 1996. Nouveaux résultats Helsinki, Finland, June 27 July 1988. EAAP Publication,
d’estimation de l’héritabilité des gains en course des pur sang en vol. 42, pp. 41 – 54.
France. Genet. Sel. Evol. 28, 275 – 283. Tavernier, A., 1990a. Caractérisation des chevaux de concours hip-
Minkema, D., 1979. Studies on the genetics of trotting perfor- pique français d’après leur estimation génétique par un Blup
mances in Dutch trotters: I. Heritability of trotting performance. modèle animal. Ann. Zootech. 39, 27 – 44.
Ann. Génét. Sél. Anim. 8, 511 – 526. Tavernier, A., 1990b. Estimation of breeding value of jumping
Tavernier, A., 1986. Données nouvelles sur les performances des horses from their ranks. Livest. Prod. Sci. 26, 277 – 290.
chevaux de sport: précocité, effets maternels, influence du type Tavernier, A., 1994. Special problems in genetic evaluation of
génétique. Proceedings of the Journée de la recherche chevaline. performance traits in horse. Proceedings of the 5th World Con-
CEREOPA, Paris, pp. 31 – 57. 12 March. gress on Genetics Applied to Livestock Production, vol. 17.
Tavernier, A., 1988. Advantages of BLUP animal model for Guelph Univ. Ed., Ontario, Canada, pp. 450 – 457.
breeding value estimation in horses. Livest. Prod. Sci. 20, Tolley, E.A., Notter, D.R., Marlowe, T.J., 1985. A review of the
149 – 160. inheritance of racing performance in horses. Anim. Breed.
Tavernier, A., 1989a. Caractérisation de la population des Trotteurs Abstr. 53, 163 – 185.