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Effect of Pyridine On Zinc Phthalocyanin PDF
Effect of Pyridine On Zinc Phthalocyanin PDF
Vibrational Spectroscopy
journal homepage: www.elsevier.com/locate/vibspec
a r t i c l e i n f o a b s t r a c t
Article history: In the present work, we have studied the effect of pyridine on the zinc phthalocyanine by recording the
Received 12 May 2010 infrared absorption and X-ray diffraction spectra with and without pyridine. In the presence of pyridine
Received in revised form 11 August 2010 phase of the crystalline zinc phthalocyanine changes from ˇ to ˛. Some infrared bands show changes
Accepted 17 August 2010
in their positions and/or intensities. These changes have been interpreted on the basis of coordination
Available online 18 September 2010
of the pyridine molecule with the central zinc ion. Coordinated pyridine transfers some of its charge to
the electron system of the phthalocyanine ring through zinc ion. Pyridine molecule also distorts the
Keywords:
phthalocyanine molecule by pulling zinc ion out of the phthalocyanine plane. Density functional theory
Zinc phthalocyanine
Phthalocyanine pyridine interaction
also confirms the ligation of pyridine molecule at the fifth coordination site of the central metal ion.
Infrared spectra © 2010 Elsevier B.V. All rights reserved.
X-ray Diffraction
Density functional theory calculations
1. Introduction calculations of Caro et al [18] also indicates that solvent plays a role
in stabilization of some Pc molecules, while in others it has a desta-
Phthalocyanines are well suited for electronic devices due to bilizing effect. However, unsubstituted Pcs are sparsely soluble in
their excellent stability against chemicals and temperature, rich solvents other than pyridine.
substitution chemistry and processability. Phthalocyanine (Pc) and Recently, progress has been made towards the understanding
its metal analogous (MPc) possess interesting physico-chemical of interaction between Pc and chemical analytes including solvent
properties, which have the potential for applications in the area of vapours at molecular level [19,20] in order to comprehend their
non-linear optic, acoustics, gas sensing, magnetic materials, pho- sensing action. It is believed that the electron acceptor molecules
toconducting agents, photovoltaic cell elements, electrocatalysis, on interaction form charge transfer complex with the Pc molecules
colorants in chemical industry, optical data storage, photosensi- [19]. However, situation is not very clear about the interaction of
tizers, light emitting diodes and dyes [1–7]. In these materials, Pc with the electron donors. There are some reports which sug-
excellent chemical tunability of properties can be achieved by gest that small amount of charge transfer also takes place in case
replacing metal ions at the center of the phthalocyanine (Pc) of some electron donors such as methanol [20,21]. The purpose
ring and functionalizing their side groups/axial positions. Zinc of this work is to elucidate the detailed mechanism of interaction
phthalocyanine (ZnPc), complexes have, in particular, been inten- between ZnPc and pyridine and to investigate the chemical changes
sively studied due to their excellent photosensitizing properties induced by the pyridine at the molecular level. In the present work,
[8–11]. ZnPc, dissolved in pyridine, has been investigated by infrared (IR)
It is known that solvents some times leads to the aggregation absorption, X-ray diffraction techniques (XRD) and density func-
of Pcs, which have distinctly different optical properties than the tional theory (DFT) calculations. Since the wave numbers of infrared
corresponding monomers [8,12–16]. Solvents also have profound bands are affected by structural changes induced by the interaction,
effects on the crystalline nature of the Pcs and their transformation therefore, study of the effect of pyridine on the infrared frequencies
from one crystalline form to another is found to increase on the sol- facilitates the determination of bond lengths changes on a sub-Å
vent dependent -electron-donating ability of Pcs [17]. Theoretical scale. Similar mechanism of pyridine detection may be applicable
to the Pc based sensors in which the pyridine vapour molecules
react with a Pc thin film onto a substrate and provokes a mea-
∗ Corresponding author. Tel.: +91 172 253 4454; fax: +91 172 278 3336. surable change in a certain property. In recent past, the DFT has
E-mail address: gsssaini@pu.ac.in (G.S.S. Saini). been used to calculate the equilibrium geometries of Pc molecules
0924-2031/$ – see front matter © 2010 Elsevier B.V. All rights reserved.
doi:10.1016/j.vibspec.2010.08.010
S.D. Dogra et al. / Vibrational Spectroscopy 56 (2011) 60–65 61
Fig. 1. Structure and atom numbering scheme of (a) zinc phthalocyanine and (b) pyridine.
The calculated charge on the zinc atom in ZnPcPy complex is 0.04 to the ZnPc. However, zinc ion further donates charge to the elec-
units more positive compared to ZnPc. Similarly, Mulliken atomic tron system of the ZnPc molecule; similar to the back donation
charges on all the 4 inner nitrogen atoms, Ni , have been decreased observed in the porphyrin molecules, involving electron donor and
on coordination with pyridine. This observation seems to contra- metal ion [28]. Further, evidence of the back bonding is given by
dict the fact that the pyridine transfers some of its electronic charge the calculated charges on the carbon atoms marked as Ca , Cb and Cc ,
Fig. 2. Interaction between zinc phthalocyanine and pyridine molecules: (a) free zinc phthalocyanine molecule seen through the molecular plane; (b) zinc
phthalocyanine–pyridine complex seen through the phthalocyanine molecular plane, and (c) zinc phthalocyanine–pyridine complex seen through the pyridine molecular
plane.
S.D. Dogra et al. / Vibrational Spectroscopy 56 (2011) 60–65 63
1269
Transmission (%)
1146
in their spectra. These bands may arise due to the formation of
1216
1482
1067
604
50 aggregates, which are responsible for the relaxation in the selection
1030
992
rules. All the observed bands along with assignments are listed in
Table 2. The table also shows calculated IR frequencies after scal-
1580
748
ing, which has been done with the help of linear fitting (y = mx + c)
1438
705
ure and table, some bands of ZnPc and pyridine either shift or show
change in the intensity for the ZnPcPy complex.
100
(b) In the IR spectrum of ZnPc, we observe intense bands in the
C–H bending region at 727, 752 and 780 cm−1 . These band posi-
tions, therefore, reveal that ZnPc powder has ˇ crystalline phase,
1608
956
1004
571
1453
635
500
1409
878
1483
888
Pc and very often these bands are used to identify different crys-
780
1285
50
talline polymorphs ˛, ˇ, ε etc [29]. There exists a strong association
1060
752
1088
0
as a result of which the weak intensity forbidden bands also appear
in its IR spectrum. Observed intensity pattern of the bands at 948
100 and 956 cm−1 also supports the presence of ˇ-crystalline phase of
(c)
ZnPc [29].
1356
800
1218
632
1444
772
499
1004
570
779 cm−1 . These band positions except the shoulder match well
Transmission (%)
1164
1038
1282
50
1484
1058
1116
750
3.2. IR Spectra
pyridine in the wave number region 450–1700 cm−1 have been dis-
played in Fig. 3. Trace a of the figure also shows the IR spectrum of
pyridine. In order to simplify the assignment of observed IR bands
of ZnPc, using the fact that this complex in solid form are molec-
ular crystals, the internal vibrations can be considered as those of
a single molecule with slight perturbations from the neighboring b
molecules.
The DFT calculations resulted in the D4h symmetry for this pla-
nar molecule (see Fig. 1a). Moreover, previous DFT calculations
of ZnPc also resulted in the idealized D4h point group symme- a
try [20,24]. Therefore, the following vibrational analysis of ZnPc
5 10 15 20 25 30 35
molecule is based on the D4h point group symmetry. This molecule
2θ (deg)
has 57 atoms and accordingly 165 normal modes of vibrations,
which can be divided into two groups: in-plane vibrations of sym- Fig. 4. Observed X-ray diffraction spectra of (a) zinc phthalocyanine; and (b) zinc
metry A1g , A2g , B1g , B2g , Eu and out-of-plane vibrations of A1u , A2u , phthalocyanine–pyridine complex.
64 S.D. Dogra et al. / Vibrational Spectroscopy 56 (2011) 60–65
Table 2
Position and assignment of observed infrared bands of zinc phthalocyanine, pyridine and their complex.
458 p (ring)
500 505 9.46 499 500 10.03 Eu ; ı (iso) + (Nb –Nb )
571 575 10.53 570 568 9.48 Eu ; ı (iso)as + ı (Nb –Ca –Ni )as
604 628(sh) 627 11.01 ıp (ring)
635 620 0.0 632 631 7.70 Eu ; ı (iso)as + ı (Ca –Nb –Ca )as
651w 649 0.55 ıp (C–C–N)+ıp (C–C–C)
694 684 0.0 683 0.01 ı (iso) + ı (Ca –Nb –Ca )
705 706(sh) 693 21.90 p (C–H)
727 718 146.73 720 732 209.20 A2u ; ı (C–H) + ı (Ca –Nb –Ca ) + ı (Ca –Ni –Ca )
748 p (C–H)
752 750 56.41 750 744 67.09 Eu ; ı (iso)as + (Ni –Ni ) + ı (Ca –Ni –Ca )as
798 2.29 772 773 22.85 (C–H)
780 798 2.29 779(sh) 791 1.03 A2u ; (C–H)
800 834 0.0 800(w) A1g ; (Ni –Ni ) + iso breath + ı (benz)
825w 825 3.55 A1g ; (Ni –Ni ) + iso breath + ı (benz)
878 873 0.66 867 871 0.09 Eg ; (C–H)
888 882 38.57 886 879 37.03 Eu ; (Ni –Ni ) + (Nb –Nb ) + ı (iso)
948 936 3.06 940 933 2.89 A2u ; (C–H)
956 966 0.0 946 963 0.00 Eg ; (C–H)
992 p (ring)
1004 1008 5.85 1004 1007 9.91 Eu ; ı (C–H) + (Cc –Cc )as + (Cc –Cd )as
1008 0.0 1009(sh) 1007 12.08 A1g ; ı (C–H) + (Cc –Cc )as + (Cc –Cd )as
1030 1038 1023 9.54 p (ring)
1060 1055 76.68 1058 1054 93.88 Eu ; ı (C–H) + ı (iso) + (Ni –Ni )
1067 1067 ıp (C–H)
1088 1098 113.26 1089(broad) 1097& 124.52 Eu ; ı (C–H) + ı (Ca –Ni –Ca ) + (Ni –Ni )
1101 92.96
1103 1107 0.0 1108 0.0 B2g ; ı (C–H) + ı (pyr ring)
1117 1113 186.99 1116 1112 198.52 Eu ; ı (C–H) + (Ca –Cb )
1146 1152 2.39 ıp (C–H)
1164 1163 65.27 1164 1164 67.08 Eu ; ı (C–H) + (Ca –Ni )
1173(sh) 1182 4.22 1213 0.06 Eu ; ı (C–H)as + (Ni –Ni )
1216 1218 1216 18.79 ıp (C–H)
1269 1262 1276 0.01 p (C–N)+p (C–C)+ıp (C–H)
1285 1282 39.18 1282 1283 34.49 Eu ; ı (C–H) + (Ca –Ni )
1312 1316 25.89 1323 19.18 Eu ; ı (C–H)+ (Ca –Cb )+ (Zn–Ni )+ (Ca –Ni )
1333 1339 243.26 1330 1340 219.98 Eu ; ı (C–H)+ (C–C) benz+ (Zn–Ni )+ (Ca –Nb )as
1341 0.0 1356(w) 1342 5.07 A1g ; ı (C–H)+ (C–C) benz
1409 1405 86.05 1409 1409 70.10 Eu ; ı (C–H)+ (Ca –Cb )+ (C–C) benz+ (Ca –Nb )
1438 1444 1448 16.21 p (C–N)+p (C–C)+ıp (C–H)
1453 1460 35.78 1456 1462 46.66 Eu ; ı (C–H)+ (C–C) benz + (Ca –Nb )
1482 1487 3.15 p (C–N)+p (C–C)+ıp (C–H)
1483 1483 70.93 1484 1488 74.09 Eu ; ı (C–H)+ı (Ca –Ni –Ca )+ (Ca –Nb )
1508 1497 0.0 1508 1501 0.97 A1g ; (iso)+ı (C–H)+ (Ca –Nb )+ı (Ca –Ni –Ca )
1580 1586 0.52 p (C–C)+ıp (C–H)
1579 8.79 1599(sh) 1586 11.51 Eu ; (Ca –Nb )+ı (Ca –Ni –Ca )
1608 1603 11.91 1608 1609 11.39 Eu ; ı (C–H) + ı (Cb –Cc ) + ı (Cc –Cd )
a
Subscript p denotes the vibrations related to pyridine. Symbols , ı, and denote the stretching, in-plane bending, out-of-plane bending and heaving motion [22],
respectively. Notations iso, as breath, benz and pyr have been used for isoindole, asymmetric vibration, breathing vibration, benzene and pyrrole, respectively.
b
Calculated intensity is given in units of km mol−1 .
all the observed peaks may be assigned to ˇ crystalline ZnPc [17]. only be explained on the basis of interaction between ZnPc and
Trace b shows additional diffraction peaks, which may arise due to pyridine at molecular level. This interaction causes a change in the
various planes of the ˛ crystalline ZnPcPy. Some of these additional conformation of ZnPc molecule as discussed below. Since, pyridine
peaks at 2 = 7.56, 16.39, 20.67 and 25.50 degree can be assigned to is well known coordinating solvent, which has also been confirmed
˛ crystalline phase of ZnPc [17]. Strongest peak in the spectrum of by the DFT calculations, therefore, pyridine molecule interacts with
ZnPcPy (trace b) at 2 = 26.33 degree is also present in the spectrum the phthalocyanine molecule through the fifth coordination site of
of ZnPc (trace a). This peak corresponds to d = 3.38 Å and arises due the central metal ion. This ligation of pyridine molecule pulls the
to diffraction from the molecular planes stacked along the b-axis zinc ion out of the mean phthalocyanine plane, which has been
of crystals. The other additional peaks were not assigned due to confirmed by the DFT calculations (Fig. 2). The out-of-plane dis-
non-availability of ICDD cards and X-ray diffraction data of ZnPc to placement of the zinc ion increases the mean separation between
us. metal and inner nitrogen (Ni ) atoms from 1.99 to 2.04 Å (calcu-
Apart from the change in the crystalline phase, pyridine interac- lated). This increased separation and decreased Mulliken atomic
tion also causes change in the position of some other IR bands. For charges on central metal ion and inner nitrogen atoms weaken the
example, bands at 1285 and 1333 cm−1 shift downward by 3 cm−1 bonding between zinc and Ni atoms. This leads to lowering of the
whereas band at 1453 cm−1 shifts upward by 3 cm−1 . Since, posi- position of the bands involving primarily the Zn-Ni stretching or
tions of these higher wave number bands are insensitive to the any other vibrations involving the motion of these atoms. On the
crystalline phase change, therefore, changes in their positions can other hand band at 1453 cm−1 mainly arises due to the C–C and
S.D. Dogra et al. / Vibrational Spectroscopy 56 (2011) 60–65 65
Ca –Nb stretching. Although, the average separation between C–C for the change in the intensity of some IR bands and observation of
and Ca –Nb atoms remains unchanged on pyridine coordination, certain new bands. Above conclusion is also supported by the DFT
yet there is increase in the Mulliken charge on these atoms due calculations. The present study may be helpful in understanding
to charge transfer from the pyridine to the electron systems and the pyridine sensing mechanism of zinc phthalocyanine.
subsequently back bonding. This may strengthen the bonding
between these atoms and may shift upward the position of band Acknowledgments
at 1453 cm−1 . The displacement of the zinc ion from the molecular
plane leads to doming of macrocycle with decrease in overall sym- This work is financially supported by the Department of Science
metry of the phthalocyanine molecule from D4h to C4v . However, if and Technology, India. IR and XRD spectra were recorded at SAIF,
the attached pyridine molecule is also taken into account then the Panjab University.
global symmetry of the ZnPcPy molecule can be taken as C2v .
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