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Bioorganic & Medicinal Chemistry Letters
Bioorganic & Medicinal Chemistry Letters
Bioorganic & Medicinal Chemistry Letters
a r t i c l e i n f o a b s t r a c t
Article history: Molecular interactions between terpenoid mosquito repellents and three typical human-secreted attrac-
Received 19 November 2013 tants, ammonia, 1-octen-3-ol, and formic acid were studied. Relative energies, bond distances, and bond
Revised 20 December 2013 angles of the molecular interactions were obtained at HF level to evaluate the interaction intensity and
Accepted 24 December 2013
types. The effects of molecular interactions on repellency were investigated by the subsequent
Available online 2 January 2014
quantitative structure–activity relationship (QSAR) study. The results of this study suggest that attrac-
tant–repellent interaction should not be ignored and could be helpful for future research on the repelling
Keywords:
mechanism of mosquito repellents.
Terpenoid
Mosquito repellent
Ó 2014 Elsevier Ltd. All rights reserved.
Human-secreted attractant
Molecular interaction
Repellency
Mosquito repellents are a group of compounds which act to pre- how this repellent works. Some researchers have confirmed that
vent humans from mosquito biting.1 The spread of some fatal epi- DEET can block electrophysiological responses of olfactory sensory
demic diseases,2 like malaria, which caused 1.17 million deaths in neurons to attractive odors. Davis et al. found that DEET inhibits
2010, are caused by mosquito biting.3 Also, drug resistances be- lactic acid-sensitive neurons, a pair of chemoreceptor neurons in
come more common. For example, Plasmodium falciparum (Welch) the grooved-peg (A3) on the antennae of the mosquito, Aedes
has an increased resistance to anti-malarial drugs.4 These exem- aegypti.14 Recently, Ditzen et al. found that DEET strongly inhibited
plify the reason why mosquitoes are causing more and more health 1-octen-3-ol-evoked electrophysiological responses in Anopheles
issues. Therefore, as a way to remedy this situation, repellent is gambiae and Drosophila melanogaster.15 Another opinion is that
recommended as a way for personal protection, and thus, the the mosquito evades its host after its olfactory neuron is activated
development of powerful mosquito repellents is extremely impor- by repellent DEET. Syed et al. identified an olfactory receptor neu-
tant. Traditional mosquito repellent screening processes are ron (ORN) housed in a trichoid sensillum on the Culex quinquefas-
expensive and time-consuming. Quantitative structure–activity ciatus antennae that detects DEET in a dose-dependent manner.
relationship (QSAR) has therefore been applied to assist with this This means that the mosquito endows with DEET-detecting ORNs,
process.5 However, only a few studies have investigated the quan- to detect and avoid DEET.16 Dogan et al.17 found that DEET acts as
titative relationships between chemical structures of mosquito an attractant when a human host is absent and a repellent in the
repellent and their repellency.6–11 presence of the host. Such observations are confusing and difficult
Moreover, the repelling mechanism is still unclear and, to cer- to explain. It may imply that attractants from human hosts may af-
tain extents, controversial. The N,N-diethyl-3-methyl benzoyl fect some properties of ‘commercial repellents’ and the repelling
amide (DEET), which was discovered in 1954,12 has been one of mechanism could be much more complicated than what one
the most successful mosquito repellents used for decades.13 would expect. The role of attractants from human hosts and their
Numerous studies have been carried out in order to understand potential effect on the repelling mechanism have been ignored in
most QSAR studies done so far.
⇑ Corresponding authors. Tel.: +1 8107623275; fax: +1 810 7666693 (J.S.); It is known that, besides L-lactic acid, there are many attractant
tel.: +86 13870686011 (Z.W.). compounds from skin emanation, for example, ammonia, 1-octen-
E-mail addresses: jiesong@umich.edu (J. Song), zongdewang@163.com 3-ol, and some short-chain carboxylic acids. Ammonia, ranging
(Z. Wang). from 17 lg/L to 17 mg/L, makes a significant contribution to the
Co-corresponding author.
0960-894X/$ - see front matter Ó 2014 Elsevier Ltd. All rights reserved.
http://dx.doi.org/10.1016/j.bmcl.2013.12.102
774 S. Liao et al. / Bioorg. Med. Chem. Lett. 24 (2014) 773–779
Table 1
The interaction energy (in kJ/mol) calculated at HF level
O
O CH3
1 1.767155866 8.3 15.8 20.7
O
O C2H5
2 1.803457116 15.3 16.7 21.0
OH
3 1.861534411 13.0 8.6 25.5
OH
O H
4 1.954242509 10.3 10.2 23.1
OH
O
O CH3
5 1.908485019 19.9 10.5 21.0
OH
O
O C2H5
6 1.857332 19.9 14.0 26.1
OH
O
8 1.587710965 13.8 16.8 21.7
O
O
9 1.607455023 14.7 16.5 19.0
O C2H5
OH
10 1.838849091 12.6 10.5 22.2
S. Liao et al. / Bioorg. Med. Chem. Lett. 24 (2014) 773–779 775
Table 1 (continued)
OMe
11 1.716837723 12.1 13.4 16.4
OC2H5
12 1.793790385 13.7 12.8 17.2
O
13 1.860338007 13.5 11.8 17.7
O
14 O H 1.748962861 10.2 14.2 24.1
OCOCH3
15 1.783903579 14.3 16.0 21.5
OCOC2H5
16 1.808885867 15.0 14.6 18.2
O
17 1.5774918 12.7 8.3 15.5
package, respectively.28 Geometry optimizations of these confor- Heuristic method, encoded in Codessa 2.7.10 software, was em-
mations were done at the HF/6-31G(d) level. Interactions were ployed to screen significant descriptors to build multilinear QSAR
considered between hydroxyl, carbonyl, and etheric groups in models. To avoid the ‘over-parameterization’ of the models, an
repellents and hydroxyl, carbonyl, and amine groups in other char- increasing R2 value less than 0.02 was chosen as the breaking-point
acteristic compounds. Characteristic compounds were allowed to criterion.29 The robustness and predictive ability were validated by
rotate along repellents to have all possible conformations. After ‘leave-one out’ cross validation and internal validation, which are
geometry optimizations, the most stable conformations were se- referred.7,29,30 The 22 compounds were divided into three groups
lected and geometrical parameters were obtained. Interaction for internal validation. Group A includes compounds 1, 4, 7, 10,
energies between attractants and repellents are calculated by: 13, 16, 19, 22, group B includes 2, 5, 8, 11, 14, 17, 20, and group
C includes 3, 6, 9, 12, 15, 18, 21. Internal three fold cross-validation
EðinteractionÞ ¼ EðARÞ EðAÞ EðRÞ
was performed.
E(interaction) represents the interaction energy, E(A) represents en- The interaction energies as well as hydrogen bonds are listed in
ergy of the attractant, E(R) represents energy of the repellent com- Tables 1–4 respectively. From the structures of three attractants, it
pound and E(AR) represents energy of the complex. is clear that formic acid could supply the carboxyl group to form
Figure 1 shows the structures of three complexes formed be- the hydrogen bonding and ammonia and 1-octen-3-ol could do-
tween three attractants and repellent (compound 1). Besides repel- nate the nitrogen and alcohol hydroxyl group. Because of the pres-
lents and complexes (formed by repellents and characteristic ence of the adjacent carbonyl moiety, the O–H group is more
compounds), specific fragments were defined to describe the area polarized than the O–H group of alcohols or the N–H group; thus,
contributing to molecular interactions (see Fig. 1, the fraction of it enhances the dipole strength. As a result, the dipoles in carbolic
the molecule in red boxes were defined as fragments). Six types acids allow these compounds to participate in energetically favor-
of descriptors, namely, constitutional descriptor, topological able hydrogen bonding (H-bonding) interactions with repellents,
descriptors, geometrical descriptors, electrostatic descriptors, functioning as both an H-bond donor and acceptor. From Table 1,
quantum-chemical descriptors, and thermodynamic molecular it confirms that the interaction energies between formic acid and
descriptors were calculated. More than 800 descriptors of repel- repellents (about -20 kJ/mol) are generally stronger than those be-
lents, fragments, and complexes (formed by repellents and charac- tween ammonia and 1-octen-3-ol and repellents (about -14 kJ/
teristic compounds) were calculated by Ampac 8.16 and Codessa mol). It can be seen, from Table 4, that formic acids could form
2.7.10 software. the shortest bond length and optimal bond angles.
776 S. Liao et al. / Bioorg. Med. Chem. Lett. 24 (2014) 773–779
Table 2
Interaction distances and angles of ammonia-repellent complexes
No. Interaction type Distance (Å) Angle (°) No. Iinteraction type Distance (Å) Angle (°)
1 >NH O@C< 2.301 169.7 12 >NH O< 2.510 100.3
>NH O< 2.514 100.1
2 >NH O@C< 2.496 102.1 13 >NH O< 2.596 94.5
>NH O@C< 2.418 107.2 >NH O< 2.512 99.6
3 >NH O< 2.411 106.9 14 >NH O@C< 2.274 154.3
>NH O< 2.435 105.3
4 >N- HO- 2.692 169.5 15 >NH O@C< 2.527 98.6
>NH O@C< 2.511 99.5
5 >NH O< 2.265 138.6 16 >NH O@C< 2.329 113.8
>NH O@C< 2.369 115.7
6 >NH O< 2.253 140.0 17 >NH O< 2.504 103.3
>NH O@C< 2.369 115.8 >NH O< 2.396 110.6
7 >NH O< 2.363 110.1 18 >NH O@C< 2.339 112.4
>NH O< 2.585 95.9
8 –NH O@C< 2.161 179.7 19 >NH O@C< 2.348 111.9
9 >NH O@C< 2.525 98.6 20 >NH O@C< 2.163 176.5
>NH O@C< 2.541 97.6
10 >NH O< 2.426 106.8 21 >NH O@C< 2.472 103.6
>NH O< 2.430 106.5 >NH O@C< 2.426 106.6
>NH O< 3.942 118.9
11 >NH O< 2.578 95.2 22 >NH O@C< 2.637 92.5
>NH O< 2.530 98.0 >NH O@C< 2.406 106.8
S. Liao et al. / Bioorg. Med. Chem. Lett. 24 (2014) 773–779 777
Table 3
Interaction distances and angles of 1-octen-3-ol-repellent complexes
No. Interaction type Distance (Å) Angle (°) No. Interaction type Distance (Å) Angle (°)
1 –OH O@C< 2.155 144.5 12 –OH O< 2.155 151.8
2 –OH O@C< 2.181 148.3 13 –OH O< 2.187 155.6
3 –OH O< 2.179 164.2 14 –OH O@C< 2.196 169.6
–OH O< 2.531 121.7
4 –OH O@C< 2.227 160.7 15 –OH O@C< 2.165 137.1
–OH O< 2.363 141.4
5 –OH O@C< 2.214 155.8 16 –OH O@C< 2.627 152.1
–OH O< 2.176 132.1
6 –OH O@C< 2.173 166.7 17 –OH O< 2.184 162.7
7 –OH O< 2.172 163.6 18 –OH O@C< 2.191 153.8
8 –OH O@C< 2.185 177.6 19 –OH O@C< 2.183 163.8
–OH O< 2.466 125.8
9 –OH O@C< 2.186 174.8 20 –OH O@C< 2.186 173.7
–OH O< 2.385 127.6
10 –OH O< 2.148 161.9 21 –OH O@C< 2.159 139.4
11 –OH O< 2.187 154.5 22 –OH O@C< 2.221 138.5
Table 4
Interaction distances and angles of formic acid–repellent complexes
No. Interaction type Distance (Å) Angle (°) No. Interaction type Distance (Å) Angle (°)
1 –OH O@C< 2.131 172.3 12 –OH O< 2.081 174.3
2 –OH O@C< 2.131 172.4 13 –OH O< 2.090 159.3
3 –OH O< 2.081 146.7 14 –OH O@C< 2.088 166.8
4 –OH O@C< 2.172 172.8 15 –OH O@C< 2.102 179.7
>C@O HO– 2.354 167.9
5 –OH O@C< 2.150 175.0 16 –OH O@C< 2.136 177.2
6 –OH O@C< 2.206 146.4 17 –OH O< 2.151 170.3
>C@O HO– 2.436 161.7
7 –OH O< 2.096 163.6 18 –OH O@C< 2.130 177.2
8 –OH O@C< 2.100 178.8 19 –OH O@C< 2.131 177.8
9 –OH O@C< 2.111 172.9 20 –OH O@C< 2.124 177.0
10 –OH O< 2.106 150.5 21 –OH O@C< 2.123 175.6
>C@O HO– 2.140 121.0
11 –OH O< 2.133 179.0 22 –OH O@C< 2.138 168.2
Table 5
QSAR models
Table 6 2.00
Validation of QSAR models
1.95
Model R2 R2cv Training R2fit Test set R2pred y= -9.0909E-6+x
1.90
2.00
fragment on the complex between the repellent and ammonia. It 1.95
is similar to the previous study,24 where the electrostatic interac- y= -4.5455E-6+x
1.90
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