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Parachors in Drug Design
Parachors in Drug Design
Abstract-Parachor has been used extensively in physical organic chemistry for structure determination.
It has rarely been used as a parameter for the correlation of structure and biological activity. We
have reexamined the parachor concept for structure-activity correlations of some closely reiated ana-
logs. Parachor is an additive and constitutive molecular parameter consisting of two physical properties,
molar volume and surface tension, factors which appear to be important in the passage of a drug
or hormone from the site of administmtion or synthesis to the site of action. Correlations between
parachor values and bioiogicai activities for a number of drug classes have been examined. Good
correlations were obtained for three classes: thyromimetic activity of 3’-substituted thyroxine analogs,
blood clotting inhibitory activity of S-substituted pentylamines, and local anesthetic activity of the
paracaines. Correlations with parachor are comparable to those obtained with the Hansch hydrophobic
constant x for six more drug classes: antibiotic activity of penicillins; fibr~o~~ic activity of 2.4.
substituted benzoic acids; par~ym~th~yt~ activity of 2-~kyi~p~nhydrami~s; beta-receptor acti-
vity of sympathomimetics; fibrinolytic activity of S-substituted sahcylieacids; and isohemoiytic con-
centrations for n-alcohols. The relative merits of parachor and partition coefficients in oredictina
biological activities are discussed. When data are -available for both parameters, both correlation;
appear to be equally useful. Because the parachor is a truly additive and constitutive property and
involves no new experimental measurements. its predictive usefulness in drug design deserves further
evaluation.
Mathematical correlations between chemical struc- u& of the molar volume and the fourth root of the
ture and biological activity have been attempted by surface tension [ 181:
different workers in the search for analogs of drugs P = M.D- i.Y”* = CP, m
and bioactive compounds with higher and more selec-
tive activity by the use of different physico-chemical where P is parachor, M is molecular weight, D is
properties, e.g. solubility [l], partition coefficients density and Y is surfan tension. Surface ten&on is
[2,3], polarizability [4], molar attraction constants a measure of the intermolecular attractive and repul-
[S], Hammett’s electronic substituent constants [6,73, sive forces. Parachor may be regarded as the molecu-
Taft’s steric substituent constants [S, 93, and mokcu- lar volume of a liquid of a surface tension equal
lar orbital charge density in&x [lo]. Hansch [I l-131 to unity.
has made a major contribution to the field of drug When the surface tensions of the compounds in
design by using octanol-water partition coefficients an analogous series are numerically similar, the para-
in modsed Hammett equations [l4]. McGowan char values of the analogs are a good measure of
El5. l6] made the first attempt to correlate their relative molecular sixes. The effect produced by
the parachor values of a large variety of organic a substituent group on the molecular size and the
compounds with their biological activity. For some intermolecular interaction is reflected in the para-
antimicrobial compounds he found a linear relation- char value of the substituted analog. An important
ship between their narcotic potency and their para- aspect of parachor for practical use is that it is a
char. Recently Leo et aL[l7J have made a compari- truly constitutive and additive property and may be
son of four parameters used in structure-activity expressed as the sum of the atomic parachors: P,
studies. The activities of a variety of compounds of corresponding to the individual atoms, with necessary
widely di&ent chemii structure, as measured in corrections for the type of bondii Extensive tabula-
different biological systems, were correlated with tions of these atomic par&hors arc avail&e [l9],
octanol-water partition coefficients, polarixabilitieq and comparison of measured molecular parachors
molar attraction constants, parachors and molecular with those calculated from the atomic parachors indi-
weights. In the systems analyzed by them, octanol- cates a close agreement of measured and calculated
water partition coe@icients correlated best with bio- values, namely they differ by approximately 1 per
logical activities, and parachors gave the next best cent. Further discussion of the atomic parachors used
correlations. Potentially, the use of parachor has dis- in the present study is given in Methods.
tinct practical advantages for the prediction of the In biological systems the production of a pharma-
biological activity of new and uns~thes~ed com- cological response depends upon the attainment of
pounds, which has prompted us to investigate in a certain concentration of the active molecule at the
detail its performance as a parameter for structure- target site. The transport of a drug or active molecule
activity correlations. from the point of administration or synthesis to the
Parachor is defined in the equation 1 as the prod- target tissue for the production of the selective biores-
1 IO4 P. AHSIAD, C. A. FIFE and A. ~MELLORS
recommended parachors for the calculation of all par- In these regression equations, r is the correlation coef-
achors reported in this paper. With the help of the ficient, s is the standard deviation and F is the vari-
parachor tables, it is possible to calculate the molecu- ance ratio of Snedecor. The figures in parentheses
lar parachor value of any compound if the chemical are the 95 per cent confidence intervals. The quality
structure of the compound is known. of the fit as indicated by the F-test shows what is
Statistical methods. Statistical correlations were car- apparent in Fig. 1, that the parachor gives a statisti-
ried out by stepwise multiple regression analysis using cally better fit than the Hansch n; viz. for equations 7
a computer program of the Institute of Computer and 9, F has a value of 277 for parachor and 49 for
Science, Univeristy of Guelph. Equations 2-5 were H. In both cases, the correlations are nonlinear, as
used for the regression analysis of nine different drug indicated by the lack of fit to equations 6 and 8.
classes: The introduction of more parameters, in this case
log A = k,P + Cl (2) P’ or nz, into the linear equations is likely to result
in a better fit, since the basic correlations are non-
log A = - k,P2 + k,P + C2 (3) linear. It would be unwise, however, to draw any
log A = kqn + C, (4) mechanistic conclusions based on the nature of the
new parameters.
log A = - k,n2 + k,n + C4 (9 In addition to the equations shown above, correla-
where il = calculated biological activity. P = para- tions involving the Hamrnett electronic constant, 0,
char value, a = Hans&s hydrophobic constant of the substituent and a coefficient, p, for the reaction
[ 11. 121; all k’s are coefficients and all C’s are con- system were investigated, for the thyromimetic ana-
stants. logs only, using equations 12 and 13.
Parachors in drug design 1105
Relative
Substitutnt Y Parachor Hansch nt activityf Log activity
Table 2. Relative local anesthetic activity of the paracaines (~substituted dialkylaminoalkyl~~oic estersp
R ’ \ C-O-CH~CH&C2Hs)2 Cle
--0- H
Relative anesthetic
Para-substituent Parachor Hansch xt activity$ Log activity
It is also possible that such a groove occurs in the classes have been correlated against both the para-
halogenating enzyme peroxidase, which iodinates the char and the Hansch in values of the substituents.
thyronine nucleus to synthesize thyroxine in ka. The In some drug classes, e.g. S-substituted pentylamines
occupancy of the proposed groove in the halogenat- (Table IX paracaines (Table 2), ~logen-substituted
ing enzyme peroxidase by thiocyanate may result in penicillins (Table 3), Ebrinolytic benzoic acids (Table
decreased iodination and consequently decreased 4)V parasympatholytic 2alkyl-diphenhydramines
levels of thyroxine. The natural goitrogen in Brassica (Table 5), sympathomimetic N-alkyl-epinephrines
plants, allylisothiocyanate, has two portions in the (Table 6), fibrinolytic j-substituted salicylic acids
molecule, ally1 and isothiocyanate, both of which have (Table 7) and isohemolytic n-alcohols (Fig. 2), both
parachor values nearly equal to that of the iodine the parachor and the Hansch x gave an approxi-
atom. mately equal or comparable fit for the linear relation-
Other cirug classes. In Tables l-7 and Fig. 2. the ship. The addition of the squared-term of R improves
biological activities of analogous series of eight drug the correlation signil%antIy in certain cases (Tables
Table 3. Antibiotic activity of penicillin analogs containing substituents on the phenoxy group*
*The data. when subjected to regression analysis. indicate that parachor gives a better fit than Hansch 12 in
terms of the values of the correlation coefficienr r and the F term. The number of cases is 17.
Log % j-receptor
Substituent Parachor Hansch nt activity:
I
-C-CHs-Ph 332.6 3.57 2146
I
CH3
* Regression analysis was carried out on the data in the table; the number of cases is 5. The values of the correlation
coefficient r. and ttre F term show that the parachor gives a fit almost as good as that of Hansch n. The regression
equations are as follows:
F
log A = @OC04(+_0+004)P + 2.03 &8 @:3 106
log A = -0GOOl (+WnIOl)P~ + @0012(+s@006)P + 1.99 0.98 O-01 35.1
log A = 0036(fM)3l)n + 204 0.88 Q03 lo-4
log A = -@017(f@010)7r’ + O.O99(?@036)x + 2.01 099 001 569
i References 11 and 12.
: References 31 and 33.
Table 7. Fibrinolytic activity of 5.substituted salicylic acids*
Fig. 2. Isohemolytic activity and inhibition of lobster axon resting potential by n-alcohols [34,33] plotted
against (a) the Hansch R values and(b) the parachors of the alcohols.
1 and 6), whereas the addition of P” causes a rela- Stan? for making structure-activity correhtions will
tiveiy small change in the correlation. be influenced by the a~ilab~ity of appropriate para-
n-~~co~~s. In Fig. 2, the isohemolytic con- char and TCvalues. Because parachor is an additive
centrations of tz-alcohols [35] and inhibition of the and constitutive property, the molecular parachor of
lobster axon resting potential by n-alcohols were plot- any compound can be calculated from the chemical
ted as a function of (a) the Hansch x [I33 values structure using the extensive compilations that exist
and (b) the parachors of the n-alcohols. The partition for atomic and group parachor values [19]. Leo PC
coefficient gave a slightly better correlation than the al. [17] have argued that the parachor may have
parachor for the linear-term equation. But for the limited usefulness because of the experimental difficul-
squared-term equation, both parameters gave an ties in obtaining accurate surface tension measure-
equal correlation. The method of regression analysis ments for organic compounds. In practice, however,
was applied to the data for equations 14-17. The there is little necessity for such measurements, since
number of cases (n) is 7. ,the parachor tables for a large number of compounds
The plot includes the data for another assay namely are already available.
the inhibition of resting potential in lobster axons The parachor and the octanol-water partition coef-
from the study of Hansch and Glave [34], whose ficients (x) are closely related properties; therefore
regression analysis has not been shown here. The the II values should also be additive and constitutive.
plots are indicative of good correlations in the second However, extensive compilations of individual atomic
case also. and group contributions to the II value are not avail-
Structure-activity correlations have been reviewed able. It is not yet possible to predict the K values,
in this paper for nine classes of drugs. The correlations and hence the biological activities, in some cases,
of biological activities with parachor are comparable of large complex molecules such as steroids and alka-
to those obtained with the Hansch hydrophobic con- loids. Parachor values can be readily calculated for
stant IL.It appears that parachor and R measure the such molecules and biological activity correlations
same fundamental property, that of the ability of the can then be made using these parachors. For complex
molecule to cross hydrophobic regions of membranes molecules such as steroids, correlations between bio-
and to undergo hydrophobic bonding to receptor logical activity and physical properties have not been
proteins. The parachor is perhaps a more consistent extensively employed because the physical measure-
measure of this property for a series of drugs in which ments are not readily available [36]. The parachors
both alkyl and halogen derivatives are present (Fig. of these molecules, obtained by calculation, have
1). shown interesting correlations with steroid biological
The choice between parachor and the Hansch con- activities [37].*
Many drug responses do not correlate well with
either the Hansch hydrophobic constant (zr) or with
*P. Ahmad C. A. Fyfe and A. Mellors. manuscript parachor. Presumably in these cases, the passage of
submitted for publication. the compound across membranes or binding to
Parachors in drug design I it*)
hydrophobic regions of proteins is not a limiting fk- 10. K. S. Rogers and A. Cammarata, J. med. Chcm. 12,
tor in the biological action. Hansch has refined his 692 (1969).
correlations with octanol-water partition coet&ients 11. C. Hansch. T. Fujita and J. Iwasa. J. Am. them. Sot.
86, 5175 (1964).
by including terms for electronic effects and steric
12. C. Hansch and W. J. Dunn f. pharm. Sci. 61, I (1972).
effects in Hammett equations containing more than 13. C. Hansch, A. Leo, S. H. Unger. K. H. Kim. D. Nikai-
one physical parameter [13]. Apparently, similar cor- tani and E. J. Lien, 1. med. Chem. 16, 1207 (1973).
rections will frequently improve the statistical correla- 14. L. P. Hammett. Physkxi Organic Ckemisrry. 1st Edn
tion of biological activities and modiied parachor p. 186. McGraw-Hill, New York (1940).
values. We believe that the major advantages of the 15. J. C. McGowan, i. appf. Chem. 2, 651 (1952).
use of parachor in correlations with biological activi- 16. J. C. McGowan, J. appl. Chem. 4, 41 (1954).
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0. R. Quayle, Chem. Rev. 53, 439 (19531
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Acknowledgement-This work was supported by grants York (1972);
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