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Progress in Cell Cycle Research, Vol.

3, 77-97 , (1997)
(Meijer, L., Guidet, S. and Philippe, M., eds.) Plenum Press, New York, USA

chapter 7
Protein kinase CK2 ("casein kinase-2") and
its implication in cell division and proliferation
Lorenzo A. Pinna' and Flavio Meggio

Dipartimento di Chimica Biologica and Centro di Studio delle Biomembrane


del Consiglio Nazionale delle Ricerche, Universitii di Padova, via Trieste 75, 35121 Padova, Italy.
"To whom correspondence should be addressed

Protein kinase CK2 (also termed casein kinase-2 or -IT) is a ubiquitous Ser/Thr-specific protein kinase
required for viability and for cell cycle progression. CK2 is especially elevated in proliferating tissues,
either normal or transformed, and the expression of its catalytic subunit in transgenic mice is causative of
lymphomas. CK2 is highly pleiotropic: more than 160 proteins phosphorylated by it at sites specified by
multiple acidic residues are known. Despite its heterotetrameric structure generally composed by two
catalytic (a and/or a') and two non catalytic ~-subunits, the regulation of CK2 is still enigmatic. A number of
functional features of the ~-subunit which could cooperate to the modulation of CK2 targeting/activity will
be discussed.

INTRODUCTION apparatus casein kinase (re-named G-CK) being that


of counting casein among its natural substrates,
The acronym "CK2" derives from "casein kinase- together with others which are currently only
2", a term coined after the ability of this enzyme to conjectural [4]. In contrast to G-CK, which is
phosphorylate casein readily in vitro. Although localised in the Golgi apparatus and absent from the
widely used, this term is somewhat misleading as rest of the cell, CK2 and CKI are hardly detectable in
casein most likely does not belong to the endless list the Golgi apparatus [4]. CK2 is present in several
of substrates of this pleiotropic protein kinase. Hence subcellular fractions, especially the nucleus, where it
the proposal to de-emphasise the concept of "casein reaches its highest concentration [5-7]. Additional
phosphorylation" by using the abbreviation "CK2" features that differentiate CK2 from the other two
instead of the full description "casein kinase-2" [1]. classes of "casein kinase" are its ability to use GTP,
Although casein can be more or less readily besides ATP, as phosphate donor, its
phosphorylated in vitro by a variety of protein heterotetrameric structure, rare among protein
kinases, including some tyroSine kinases, three kinases and its predilection for phospho acceptor
classes of Ser /Thr specific protein kinases display a residues having clusters of acidic amino acids on
marked preference for casein over the majority of their C-terminal side. Such a remarkable site
other protein substrates and were therefore named specificity is dictated by a minimum consensus
"casein kinases". Besides CK2 these are protein sequence, S/T-X-X-E/D/Sp/Yp which is similar to,
kinase CKI ("casein kinase-I"), another ubiquitous yet definitely distinct from, the one recognised by G-
and pleiotropic enzyme structurally and CK, S/T-X-E/Sp (see table 1).
physiologically unrelated to casein [2], and bona fide
casein kinase specifically expressed in lactating The ubiquity of CK2, in conjunction with its
mammary gland where it is committed to the requirement for viability [8], unmatched pleiotropy
phosphorylation of newly synthesised casein [9] and recurrent observations linking CK2 over-
molecules (see table 1). Until recently this latter expression with neoplastic growth [10, 11] have
enzyme was believed to represent a highly dedicated attracted increasing attention to CK2, which in the
kinase specifically implicated in the processing of last decade has been dealt with in several review
casein during its secretion in the Golgi apparatus of articles [1, 2, 9, 10, 12-14]. Despite these efforts and
the mammary gland (hence its acronym "GEF-CK", the large amount of information available, CK2
Golgi enriched fraction casein kinase [3]). It has remains a somewhat enigmatic kinase, whose crucial
recently been shown however that a protein kinase role in cell regulation and whose implication in
biochemically indistinguishable from mammary signalling, gene expression and proliferation is based
gland GEF-CK is also present in the Golgi apparatus more on a wide variety of coincidental observations
of rat liver, spleen and, to a lesser extent, kidney and rather than on clear-cut evidence of cause-and-effect.
brain [4]. It has to be concluded therefore that all the It is particularly striking that the mode of regulation
three classes of "casein kinases" are ubiquitous and of CK2 remains obscure, and that CK2 does not take
pleiotropic enzymes, a unique feature of the Golgi part in any of the networks of signal transduction

77
1. A. PINNA AND F. MEGGIO

Table 1. DIstinctive properties of the three classes of "casein kinases".

CKl CK2
Tissue distribution Ubiquitous Ubiquitous Ubiquitous
Main subcellular localization Golgi Microsomes Nuclei
Cytosol Cytosol
Natural targets Casein and others Many Many
(not casein) (not casein)
PKgroup ? CKl/HHR25 CMGC
(Hanks and Hunter)
Mr holoenzyme (kDa) 400-500 40-60 130
Subunit composition ? Monomeric a2P2/ aa'P2/ a'2P2
Phosphate donor ATP ATP ATP/GTP
Consensus sequence SxE/Sp SpxxSLIB SLIxxE/D /YpSp

pathways which have been elucidated in recent tetramers, a2P2, a'2P2 and a dP2 has been
years. Consequently the inclusion of CK2 in the documented [7, 16]. In S. cerevisiae two kinds of P
category of 'growth related protein kinases' [15] subunits exist, P and po, both larger than animal P
should continue to be regarded with healthy subunits and expressed by separate genes [17]. A
scepticism until such time as it has a more rigorous similar situation applies to the plant Arabidopsis
experimental basis. thaliana [18]. In S. cerevisiae it seems likely that CK2
holoenzyme is an obligatory heterotetramer of all
Our present aim is to scrutinise the molecular four subunits [18a]. In contrast monomeric CK2
features and functional properties of CK2 that could enzymes composed of just a single catalytic subunit
help to understand why this protein kinase, essential have been isolated from Zea mays [19] and
for viability and causative of tumors, has been Dictyostelium [20], where no protein equivalent of P
committed throughout evolution to phosphorylating has yet been found. Pertinent to this may be also the
such a wide variety of cellular components. In vexed question of whether isolated catalytic subunits
particular we shall focus on structural and functional might exist under certain circumstances. Failure to
features that may reflect or underlie the mode of isolate monomeric isoforms of CK2 from tissues
regulation of CK2, and compare CK2 with other where the heterotetramers are present and co-
'growth related' kinases, particularly with the cyclin- localisation of catalytic and p-subunits detected by
dependent kinases (CDKs) which are closely related immunofluorescence microscopy in embryo
to CK2 within the phylogenetic tree of protein fibroblasts, virally transformed chicken hepatoma
kinases, and share with CK2 the use (rare among cells and HeLa cells [6] would argue against the
protein kinases) of 'regulatory subunits', but presence of catalytic subunit not combined with the
nevertheless exhibit quite distinct, and in some p.-subunits. However there are also observations
respects opposite, biochemical properties. supporting this possibility, notably the finding that
the majority of the a-subunit in the nuclei of
STRUCTURAL FEATURES Chironomus ten tans [21] is complexed to internuclear
components devoid of its p.-subunit counterpart and
Subunit composition the intriguing finding that over-expression of p in
In the vast majority of cases CK2 isolated from a COS-l cells evoked an increase of CK2 catalytic
wide variety of organisms and tissues has been activity suggestive of the recruitment of catalytic
described as a spontaneously active heterotetramer subunits, from a storage pool where they are poorly
with a Mr of approximately 130,000, composed of active, to give more active heterotetramers [22]. The
two catalytic subunits (a and/or a' of Mr 42-44 and functional implications of this and other observations
38 kDa, respectively) and two non catalytic p- will be discussed below (see section entitled
subunits whose Mr in animals is approximately 26 "Regulation").
kDa). The catalytic subunits, which are the product
of distinct genes, share high homology, a' being Structure of catalytic (ala') subunits
shorter than a at its C-terminus. In the human The primary structure of CK2 catalytic subunits
genome there are two loci encoding the a-subunit, (either a or a') displays the features that have
and a single locus for each of the a' and p-subunits. become the hallmarks of the large superfamily of
The structures of the human a and p, S. cerevisiae a protein kinases. In particular 15 highly conserved
and a', C. elegans a and p, mouse a and Theileria paroa amino acids with three or fewer variant residues
a genes are known (reviewed and/or referenced in (identified from the analysis of 75 Ser /Thr protein
[14]). The actual occurrence of all the three predicted kinases [23]) are all present in CK2 catalytic subunits

78
CHAPTER 7I PROTEIN KINASE CK2

(underlined in fig. IA) Most of these residues are CK2 catalytic subunits with their closest relatives
known to cluster around the active site and are does not exceed 33%, and that many of the peculiar
involved in ATP binding and phosphotransfer [24], features conserved across the (ll (l' subunits from
which are properties common to all protein kinases, different species (highlighted in fig. 1) are not
whether Ser /Thr or Tyr specific. These highly present in the other members of the CMCG group;
conserved residues allow one to recognize within the notably these share with the majority of protein
CK2 (l I (l' structures the canonical twelve kinases two residues (A70 and FI85 in PKA) which
subdomains that define most of the members of the are replaced in CK2 catalytic subunits by V and W,
family. A more detailed sequence analysis shows respectively; and the characteristic KKKKIKR basic
that CK2 catalytic subunits share the highest stretch preceding in CK2 the conserved Glu that
similarity with cyclin dependent protein kinases defines subdomain III is not basic in CDKs
(CDKs), mitogen-activated protein kinases (MAP whichever alignment is followed (fig. IC). By the
kinases) and Glycogen Synthase Kinase-3, together canonical multiple alignment used by Hanks and
forming one of the main branches of the Quinn [23] this basic segment matches the PSTAIR
phylogenetic tree, the so called CMCG group [25]. A motif of CDKs implicated in cyclin binding. If a
common feature, shared by all members of this manual alignment is followed based on the greater
group is the presence of two inserts, a 'small' one similarity between CK2 and PKA and CDKs, the
between subdomains IX and X and a 'large' one basic block of CK2 aligns with an acidic sequence of
between subdomain X and XI (see fig. IA). It should CDK2 (TETEG) which could account for the selection
be noted, however, that the percentage identity of the of a basic, instead of acidic, determinant at position

A
I B (Glyloop)
MSGPVPSRARVYTDVNTHRPREYWDYESHVVEWGNQDDYQL~ 50 PKA KTL"TGSFGR
glycine MAPK SYI"E"AYGM
CDK2 AKI"E,,'l'YGV
II III IV CK2 RKL"R"ItYSES2
...
loop
.......... .
S~INI~ILKPVJaaOuKRIIKJ:LENLRGGPNJ:ITLADI

.\&betrate biAdlDg, IlL'


100

J:8I./BSPJO/heparin billdillg'
interaction with P dowa-regulatory 4c.aill C (Subd. IlIIlI connection)
V VIa PKA KILDKQKVVKLKQIEHT~
VKDPVSRTPALVFEHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCHSM 150 MAPK KKISPFEHQ--TYCQRTLR~
CDK2 KKIRLDTETE-GVPSTAIR~
CK2 KILKPVKKKKIK------~81
Vlb VII
G~qvMrDBEHRXLRLI~FYHPGQEYNVRVASRYFKGl! 200
catalytic loop activatioza
loop
loop pel
D (catalytic loop)

VIII IX X PKA Y~LKPEULL


ILLVDYQMYDYS~S~MIFRKEPFFHGHmfYDQLVRIAKVLG MAPK H~LKPSNLL
250
CDK2 H~LKPQNLL
CK2 HR~VliPHNVM163

..........................
TEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQRLVSPBALDF
aajor in•• rt
300
E (activation loop plus loop p+1)
XI PKA GRT------WTLCGTPEYLA~
LDKLLRYDHQSBLTAREAMEHPYFYTVVKDQARMGSSSMPGGSTPVSSAN 350 MAPK PDHDHTGFLTEYVATRWYRA~
CDK2 VPVRTY - - -THEVVTLWYRA~
CK2 HPGQEY---NVRVASRYFKG~201

~mSGISSVPTPSPLGPLAGSPVlAAANPLGM?VPAAAGAQQ 391

Figure 1. Amino acid sequence and main structural features of human CK2 a-subunit.
In A the primary structure is reported. Bold typing denotes residues that are conserved in at least 17 out of 19 sequences of a and a'
reported in the EMBL data bank from H. sapiens (M55265, M55268), B. taurus (M93665), C. gallus (M59456, M59457), O. cuniculus (M98451),
R. norvegicus (L15618), D. rerio (X99964), X. Ioeuis (X62375), D. melanogaster (M16534), c. elegans 005274), D. discoideum (L05535), S. cerevisiae
(M22473, M33759), S. pombe (X74275), T. porva (M92084), A. tlulliana (010246, 010247), Z. mays (X61387). Highly conserved amino acids
present in at least 72 out of 75 Ser /Thr protein kinases [23] are underlined. These define subdomains common to all protein kinases
(indicated by Roman numbers). Series of bullets below the sequence define knoym functional regions, as indicated.
In B, C, 0 and E the glycine loop, the basic stretch connecting subdomain II and III, the catalytic loop and the activation plus p+ 1 loops,
respectively, are compared with the homologous sequences of PKA, MAPK and CDK2 (alignment as in [206]). Invariant residues are
underlined. Bold typing denotes residues whose function is discussed in the text (see sections entitled, "Structure of catalytic (a/ a')
subunits", "Catalytic properties and specificity" and "Regulation").

79
L. A. PINNA AND F. MEGGIO

n+3 by CDKs as compared to CK2 [26]. As discussed dramatic increase of Km towards casein (Sarno et al.,
below, the CK2 K74-77 basic quartet is implicated in unpublished), while the double mutations of
both substrate recognition (position n+3) and K74/K75 [3D] and of K75/K76 [31] proved nearly
interaction with the ~suburiit. Thus, either the ineffective on the Km for casein. By analogy with the
PSTAIR or the TETEG alignments would be corresponding PSTAIR sequence of CDKs (if the
plausible, assuming that homologous residues play canonical multiple alignment is. adopted) which
similar functions. interacts with cyclins [33], the 74-80 basic sequence of
CK2 interacts with the ~subunit (Sarno et al.,
In fig. lA bold type denotes those residues that submitted). However it mediates down-regulation by
are conserved in at least 17 out of the 19 sequences of ~, not the 'cyclin-like' positive effect on catalytic
a and a' considered; Roman numbers refer to the activity; and this latter is actually more pronounced
subdomains common to all protein kinases. with CK2a mutated in the 74-80 basic segment
Additional structural features are also indicated. The (Sarno et al., submitted). Competition experiments
following regions deserve comment. with heparin would suggest that the 74-77 basic
quartet also mediates interactions with HSP90 [34]
The Gly loop (also termed phosphate anchor, as in all and with nucleolin [35]. Another putative function of
kinases it makes contact with the ~ phosphate of this segment would be to target CK2 to the nucleus,
bound ATP). The first two glycines out of the three of as it contains a canonical nuclear localisation signal
the motif G-X-G-X-X-G are conserved, the third one [36].
being replaced by a hydrophilic residue, serine, a
feature that might confer ATPase activity by bringing The catalytic loop and the PP2A binding motif. This
water molecules in contact with ATP [27]. Two short segment spanning the highly conserved Asp
features of this loop are notable: a lysyl residue (K49) and Asn residues that define subdomain VIB (see fig
which has been shown by mutational analysis to lA) in CK2 is almost identical to those in PKA and
contribute to the recognition of the acidic CDKs (see fig. ID), with the important exception,
determinant at pOSition n+2 in peptide substrates however, of a basic residue (HI60) replacing the
(Sarno et al., unpublished); and a tyrosine (Y50) acidic one (E170 in PKA) found in the majority of
which is homologous to the regulatory residue Y15 protein kinases. PKA El70 interacts with the crucial
of CDK, the phosphorylation of which (as well as arginine present at position -2 in most PKA
that of preceding T14) suppresses the catalytic substrates. The same role is played by acidic residues
activity of cyclin-dependent kinases. In contrast, this homologous to E170 in other basophilic kinases [37].
tyrosine is replaced by a non-phosphorylatable Its replacement by a histidine in CK2 appears
residue (usually phenylalanine) in PKA and in most indicative of the acidophilic nature of this kinase,
kinases other than CDKs and CK2 (see fig. IB). It is although position n-2 is not so important in CK2
curious that in CK2 from Theileria parua, the agent of substrates. Mutational studies have corroborated this
a leukemia like disease in cattle, Y50 is replaced by a interpretation [38]. Just downstream from the
phenylalanine [28]. catalytic loop is a sequence motif conserved in
vertebrate and Drosophila CK2a (H-F-H/N-R-K-L),
The 74-80 basic stretch. This sequence, which is although not in CK2a from other species. This motif
probably the most striking hallmark of CK2 (see fig. is also found in the region of SV40 required for
IC), is situated just upstream from the conserved binding protein phosphatase 2A, and has been
glutamic acid that defines subdomain III and just shown to account for the ability of CK2a to bind to
downstream from a series of gaps with respect to the PP2A in vitro [39].
canonical multiple alignment [23]. However,
alternative alignments are also possible [26, 29] based The subdomain VII-VIII connection (activation loop
on greater homology with PKA and CDKs. and loop p+1). The region between the 'DFG' and
Whichever alignment is adopted, such a high 'APE' triplets that define subdomains VII and VIII in
concentration of adjacent basic residues is most protein kinases (both altered in CK2, where
unmatched among protein kinases in this region. they are DWG and ~PE, respectively) contains two
Mutational analyses have shown that the first part of important functional elements termed the 'activation
this cluster (K74 to K77) [30-32], but not the loop' (or 'T-Ioop' after the presence of a threonyl
subsequent K79 , R80 and K83 [32], are implicated in residue that is constitutively phosphorylated in
CK2 inhibition by heparin. However, both the 74-77 active PKA) and 'loop p+l'. The activation loop
and the 79-83 segments are implicated in substrate includes residue(s) the phosphorylation of which
recognition by interacting with the crucial (either autocatalytic or promoted by other kinases)
determinant at position n+3 [26]. Although it appears correlates with increase of activity in most, albeit not
that these basic residues are to some extent all, protein kinases [40]. In particular in CDK2, for
interchangeable as far as substrate recognition is which the crystal structures of both the inactive
concerned, K77 seemingly plays a prominent role catalytic subunit [41] and the partially active
since its individual replacement by alanine causes a complex with cyclin A [33] are available, it has been

80
CHAPTER 7/ PROTEIN KINASE CK2

shown that the activation loop blocks the entrance to interacting with ligands, as yet unknown.
the catalytic cleft in the free kinase, while in the Alternatively it has been suggested that this large
complex with cyclin A it adopts a different insertion in MAP kinases might provide an extended
conformation in which its constituent residue Thr- region of interaction with protein substrates which
160 is exposed and available for phosphorylation. bind better than short peptides to these kinases [44].
This latter leads to full activation of the kinase. As However this seems unlikely to be the case for CK2,
outlined in Fig. IE, CK2ex, in contrast to CDKs and since it generally phosphorylates peptide substrates
MAP kinases (belonging to the same CMGC group), as efficiently as the protein from which they are
does not contain either threonine or serine in its derived [48]. It is possible, however, that the large
activation loop nor has phosphorylation in this insert might help CK2 to recruit particular substrates
region ever been reported (see section entitled lacking a strong consensus sequence at their
"Regulation"). These observations, in conjunction phosphoacceptor sites.
with the finding that free CK2 catalytic subunit (in
contrast to the free catalytic subunit of CDKs) is In contrast to the large insert, the small one,
spontaneously active, suggest that the activation which in CK2 includes two histidinyl residues, may
loop of CK2 is displaced from the catalytic cleft and indeed be implicated in peptide substrate recognition
does not hamper enzymatic activity. since its mutation to that present in CDK2 caused a
significant increase in the Km value for the peptide
The 'p+ 1 loop', which is adjacent to the C- substrate R3DJSDJ [46].
terminal edge of the activation loop, derives its name
from the fact that in PKA it includes three The CDK phosphorylation sites in the C-terminal tail
hydrophobic residues (L198, P202 and L205) which of the ex-subunit. The C-terminal segment of the
form a pocket surrounding a leucine at position p+l vertebrate ex-subunit, which lies outside the catalytic
in the inhibitor peptide co-crystallized with the core, is poorly conserved in the ex-subunits of lower
catalytic subunit [42]. These hydrophobic residues organisms, and is absent from the ex'-subunits. This
are conserved or conservatively replaced in most tail contains a number of Ser /Thr residues which
Ser /Thr protein kinases. In contrast they are replaced display the consensus for and are phosphorylated by
by basic residues (RI91, R195 and K198) in CK2 cyclin-dependent kinases both in vitro and in vivo
which strongly selects acidic residues at position n+1 [49]. Although such a phosphorylation does not
(see fig. IE). Their simultaneous replacement with correlate with any overt change of activity, it is
alanines gives rise to a mutant which is severely possible that it may modulate other properties of the
defective in substrate recognition, being unable to ex-subunit, e.g. assembly with the p-subunit.
bind the acidic determinant at n+ 1 [26]. An almost Pertinent to this may be the observations that ex'-
comparable effect is observed if K198 alone is subunits, lacking the phospho acceptor sites,
mutated (Sarno et al., unpublished). It is interesting assemble into holoenzyme more rapidly than ex-
that in all the other members of the CMGC group, subunits in vivo [7], and are more susceptible than ex-
which select a proline at position n+ 1 [37], the subunits to up-regulation by the p-subunit [SO).
residue homologous to K198 is an arginine, which
has been shown by space-filling modelling to match Structure of the p-subunit
well a prolyl residue [43]. The p-subunit of protein kinase CK2 does not
share similarity with the catalytic subunits of protein
The 'small' and 'large' insert regions. These two kinases or with any other protein known, with the
inserts preceding and following subdomain X, are a notable exception of the product of the 'Stellate' gene
hall-mark of protein kinases of the CMGC group. of Drosophila, which exhibits 38% identity to the p-
The large insert, despite its extension, does not alter subunit from the same insect. Typically p-subunits
the overall architecture of either CDK2 [41] or ERK-2 from vertebrates and insects are composed of 215
[44] as compared to the prototype kinase, PKA, amino acids exhibiting high sequence conservation
which lacks this insert. Rather it gives rise to a (88% identity between human and Drosophila). The P-
protuberance in the lower part of the large lobe, subunit from the nematode C. elegans still displays
whose overall structure otherwise overlaps the large 80% identity to human p in amino acids 1-200, but
lobe of PKA. This structural element does not make has a unique 19 amino acid C-terminal extension
important contacts with cyclin A and accordingly beyond residue 215. The p-subunits present in yeasts
deletion of the large insert from cdc2 did not abolish and plants, besides being more divergent also tend to
activity or cyclin binding [45]. Likewise mutations display larger Mr owing to N-terminal extensions
affecting the same insert in CK2 [46, 26] do not alter and/or to inserts [51].
catalytic efficiency nor the ability to bind the p-
subunit. However it is interesting that deletion of the The primary structure of the human p-subunit is
large insert from cdc2 prevents the binding of suc1, shown in fig. 2, with residues conserved in all known
another component of the cdc2 active complex [47], animal p-subunits shown in bold type. Underlining
suggesting that it also may be used by CK2 for denotes those residues that are also conserved or

81
L. A. PINNA AND F. MEGGIO
IISSSBZVStlI~<mKDIL~HIRQAL 50
••••• •••
autopboapborylatioa
bill4iDSJ of IIoppUO

... .......... .
~PDEET.BJlRPNQSDLlIQAABMLYGLlBARnLi'NRa...~ 100

• • •
ZiDC fiDSJ.~ ziDC fiDIJ.~

••••••••••••• .........................
phyaical a-~ at~ctu~al iDt.~actioD
A-Ref bill4ing

LQAASNFKSPVKTIR 215

cdk pboapborylatioD

Figure 2. Amino add sequence of human CK2IJ-slibuniL


Bold typing denote residues conserved in 6 vertebrate (ff. sapiens, XI6312; G. gallus, M59458; O. cuniculus, M98450; R. norvegicus, L15619; S.
scro{tl, X56503; X. /oeois, X62376) and in Drosophila (MI6535) CK2 IJ-subunits found in EMBL data bank. Residues conserved or
conservatively replaced also in IJ and W-subunits from S. ceret1isiRe (U21283, U08849), S. pombe(X74274) and A. thaliana (L22563, U03984) are
underlined. Residues / sequences supposed to be implicated in specific functions or defining structural motifs (as indicated) are denoted by
bullets.

conservatively replaced in non-animal sequences. An region [52, 59]. These two distinct functional
obvious feature of the p-subunit is the uneven domains of the p-subunit have been physically
distribution of basic residues, concentrated in the C- dissected by generating large synthetic fragments
terminal region, and acidic residues which largely encompassing either the N-terminal (1-77) or C-
predominate in the N-terminal region. A number of terminal region (155-215) from which it has been
structural elements responsible for the biochemical demonstrated that the former displays only the
properties and putative functions of the p..-subunit negative effects of the p-subunit, as judged from its
have been mapped. It would appear that the N- ability to abolish calmodulin phosphorylation, while
terminal region contains elements that are mainly the latter protects and stimulates catalytic activity
responsible for intrinsic down-regulation of CK2 and [60]. The additional finding that peptide P[155-215]
sensitivity to polycationic effectors. In particular the but not its shorter derivative P[171-215] (nor the N-
elements implicated in negative regulation are a terminal peptide P[I-77]) tends to dimerize and to
conserved acidic stretch encompassing residues 55 to interact with the a-subunit, as judged from far-
64 [52, 53] and the autophosphorylation site at the western blot analysis [60] supports the view that the
extreme N-terminus [54, 55]. The 55-64 segment is 155-171 segment is crucial for stabilising intersubunit
also responsible for sensitivity to polylysine since association. However, plasmon resonance methods
mutation of acidic residues therein attenuates the (BIAcore), which one would expect to be more
stimulation by polylysine but not that by polyamines sensitive than far western blotting, also shows that
[52, 53, unpublished data]. The effect of these latter PU-77] interacts with a, albeit much more weakly
polycations appears to be mediated by a region than full-length p and PU55-215] [Sarno et al.,
further from the N-terminus, extending to pro-nO unpublished]. This is in agreement with the presence
[56], where a prominent role in binding spermine is in the fragment of the acidic cluster that binds the
played by Thr-72 and His-I08 [57], with contribution basic 74-79 stretch of the a-subunit [61, Sarno et al.,
from Glu-73 and Glu-77 [56]. The N-terminal 20 manuscript submitted]. The C-terminal domain is
amino acids are also involved in the binding of also essential for the interaction with A-Raf, one of
Noppl40 [58], a protein that has been shown to the many cellular 'partners' of CK2: data obtained
shuttle between the cytoplasm and the nucleus. using p mutants and the two-hybrid system
approach would indicate that both the 194-200
The structural features that are responsible for p- segment and R175 are indispensable for A-Raf
p dimerization, association with the a-subunit, binding [62]. The extreme C-terminal region of p
protection against denaturation and proteolysis and contains a residue (Ser-209) which is phosphorylated
up-regulation of activity are located in the C-terminal by CDKs both in vitro and in vivo [63]. This serine is

82
CHAPTER 7/ PROTEIN KINASE CK2

A
[@

~
*
+ 20t
-+
~-+
I PBP I
B

~[155-215l

W
X -+
+ 20t
-+
&
Figure 3. Speculative representation of assemblance of CK2 subunits to give the heterotetrameric holoenzyme (A).
Hatching denotes the C-terminal region of ~-subunit reproduced in the synthetic peptide ~[155-2151 (B). The dotted moiety of the (l-
subunits indicates its active site where the N-terminal region of ~subunit Oacking in ~[155-215» exerts its negative regulation (indicated by
arrows pointing down). This can be overcome by polybasic peptides (PBP) that compete against the (l 74-80 and 191-198 basic stretches for
binding to the N-terminal acidic region of ~.

absent from the ~subunits of Drosophila, yeast and elucidated (see section entitled "Regulation").
Arabidopsis. Furthermore, human ~ can be deprived
of a (-terminal segment which includes this site Quaternary structure of CK2 holoenzyme
without any apparent change in its functional Until the structure of CK2 catalytic subunits co-
properties [64]. crystallized with ~-subunits (or ~ fragments) is
solved the detailed picture of heterotetrameric CI<2
Sequence analysis of ~ has also disclosed two will remain a matter for conjecture. Substantial clues
intriguing structural motifs. One is located in the N- about the overall architecture of the holoenzyme
terminal region, just upstream from the acidic have, however, been provided by independent
cluster and, as pointed out by Allende and Allende studies performed in three laboratories using the
[1], is closely reminiscent of the cyclin 'destruction two-hybrid system. These have shown that, while ~­
box' responsible for the ubiquitin-mediated subunits tend to interact with each other and with
proteolysis occurring at specific times in the cell the catalytic subunits, the catalytic subunits do not
cycle. In the region spanning the amino and interact with one another [62, 66, 67]. Any plausible
carboxy-terminal domains there are four cysteines model of the heterotetramer should therefore be
009, 114, 137 and 140) whose spacing fulfils the based on ~~ and ~a contacts, while a-a contacts, if
requirements of the potential metal binding motif any, should be marginal. The additional finding that
(CPX3CX22CPXC) reminiscent of the zinc finger the dimeric form of the (-terminal ~ fragment, ~[155-
present in certain DNA-binding proteins [65]. It is 215], mainly responsible for ~a interaction, binds
interesting that this motif is conserved not only in more efficiently than its monomeric form [60] would
atypical ~subunits from S. cerevisiae, and S. pombe suggest that ~ dimerization is a prerequisite for tight
but even in the most distant relative of the family binding of a. This could mean that either each
[51], stellate protein, in which other features of the catalytic subunit needs to make contacts with both ~
~subunit, notably the auto phosphorylation site and subunits for high affinity association, or that
the down-regulatory acidic cluster, are lost. This dimerization of ~ promotes conformational changes
strongly suggests that the presence of this motif that facilitate subsequent binding of the catalytic
indeed is required for function(s), still unknown, subunits. These two possibilities are not mutually
that are shared by all the members of the exclusive. Based on these premises, and bearing in
CI<2~ / stellate family. It is also conceivable that the mind that the ~-subunit is much less accessible to
middle region of the ~-subunit may be implicated proteolytic enzymes after incorporation into the
in interactions with some of the many cellular holoenzyme [68], the assembly of CK2 subunits can
partners of this protein, which are currently being be depicted by the model shown in fig. 3, in which ~-

83
L. A. PINNA AND F. MEGGIO

pand p-a but not a-a interactions are depicted, and the GTP to ATP Km ratio [70] but does not convert
in which Pis placed in a 'core' position, not easily CK2 into a 'regular', strictly ATP-dependent kinase.
accessible to proteolytic enzymes. It should also be Second, and possibly related to its unusual
recalled that the stabilisation effect is reciprocal since nucleotide specificity, CK2 is refractory to the very
both p and a change their conformation upon powerful competitive inhibitor, staurosporine,
assembly, as shown by variations in CD spectra [69, which affects the majority of other protein kinases
70], and reduced susceptibility to denaturation [71]. [74]; but is more susceptible than most other
The proposed model also accounts, though from a kinases to halogenated derivatives of benzi-
merely pictorial stand-point, for the finding that the midazole and benzotriazole [75-77]. These obser-
main elements responsible for either p-p or p-a vations suggest that the ATP-binding pocket and/or
interactions are concentrated in the same region (the its annexes are uniquely tailored in CK2. From a
C-terminal one, hatched in fig. 3). This kind of tight practical standpoint it may also be worth noting
interaction which also confers a higher activity and that the members of a new class of selective
greater stability upon a is mimicked by the C- inhibitors of cell cycle kinases, notably 010-
terminal peptide p [155-215] [60], as shown in fig. 3B. moucine [78] and roscovitine [79], are ineffective
The counterpart for this stable interaction in a/a' is against CK2. Third, in contrast to most Ser /Thr
unknown. On the other hand weaker and reversible protein kinases, the specificity of which is
interactions (denoted in fig. 3 by dotted lines) also dictated by basic and hydrophobic residues and
occur between acidic segments in the N-terminal by prolines [37], CK2 belongs to a tiny group of
domain of P (not implicated in dimerization) and a. Ser/Thr kinases that use acidic and/or
These are responsible for down-regulation (denoted phosphorylated residues as specificity determinants.
by downwards arrows in fig. 3) and involve the basic The minimum consensus for CK2 is S/T-X-X-
stretch of a between subdomains IT and III and the E/D/Sp/Yp, although additional acidic residues
basic residues of the p+ 1 loop (see above and fig. 1). are required to optimise its phosphorylation
These residues of a are also implicated in substrate efficiency, explaining why clusters of glutamic and
binding, although their transient electrostatic aspartic acids are found on the C-terminal side
interaction with the N-terminal region of Pcannot (and sometimes also on the N-terrninal side) of most
account for the tight a-p association, which does not of its physiological sites [80]. Pertinent to this are a
appear to be reversible under physiological comment and a warning. The comment is that the
conditions. consensus sequences of CK2 and CDKs are mutually
incompatible: CDKs in fact need a proline at n+1
FUNCI10NAL ASPECTS and select a basic residue at n+3, whereas CK2
needs an acidic residue at n+3 and selects another
Catalytic properties and specificity acidic residue at n+ 1, where a proline actually
The crystal structure of the catalytic subunits of acts as a powerful negative determinant [81]. The
CK2 is not yet available. Nevertheless, the fact that warning is that the popular rule that phospho-
all of the residues that are important for catalysis in rylated serines/threonines followed by multiple
protein kinases are conserved in CK2, and that acidic residues are invariably targets for CK2 or
kinetic studies [Meggio, unpublished] are consistent 'CK2-like' enzymes should be applied cautiously
with a sequential ordered mechanism comparable to since we know that the Golgi 'casein kinase', once
the distantly related PKA [72] and CSK [73], support believed to be expressed only in lactating mammary
the view that the structural organisation of the gland, is present in other tissues as well [4]. As
active site and the mechanism of catalysis are not shown in table 1, the consensus for G-CK, S-X-E/Sp,
different from those of the other members of the is similar to that for CK2, and in this case also
kinase family. The Km (5-20 IJ.M) and Kcat (about additional acidic residues improve the
50 min-I) values with the best peptide substrates of phosphorylation efficiency [82]. Consequently
CK2 also compare fairly well with those of other phosphoacceptor sites having acidic residues at both
Ser /Thr protein kinases. There are however some n+2 and n+3 (with Glu at n+2) can a priori be
distinctive features of CK2 that warrant a short substrates of either CK2 or G-CK, this latter being by
comment. First, CK2 is one of the few protein kinases no means a 'CK2-like' kinase.
which are able to use GTP, besides ATP, as
phosphate donor. Whether this aptitude has any The structural basis for the acidophilic nature of
physiological relevance is unknown. The structural CK2 has been studied by mutational analysis of those
basis for this unusual nucleotide specificity has basic residues that are conserved among CK2s from
been partially, although not entirely, elucidated by different sources, but are not conserved in other
experiments in which the two residues that in protein kinases [26, 38, 83, unpublished data]. These
other kinases are almost invariably Ala and Phe studies have led to the identification of K49, K74-77,
have been replaced in CK2 by Val (V66) and K79/R80, H160 and R191/R195/K198 as residues
tryptophan (W176), respectively. Mutation of V66 implicated in the recognition of specificity
and W176 to Ala and Phe, respectively, increases determinants (table 2).

84
CHAPTER 7/ PROTEIN KINASE CK2
Table 2. CK2a residues implicated in substrate recognition.

Residue(s) Region Determinant recognized


K49 "Gly loop" (Subd. I) n+2
K74, K75, K76, K77 Connection subd. II-III n+3/n+4
K79,RBO subd. III n+3
HI60 catalytic loop (subd. VIB) n-2
R191, R195, K198 loop p+ 1 (subd. VIII) n+l

Regulation A second regulatory device of CDKs is the


It may appear frustrating that the mode of phosphorylation of two adjacent residues (T14-YI5)
regulation of a protein kinase endowed with a within the 'Gly loop', which keeps the kinase silent
canonical quaternary structure, equipped with two until a dual-specificity phosphatase removes the
'regulatory' subunits and able to perform both phosphate. Since the phosphorylation of Tyr-15 alone
autocatalytic and heterologous phosphorylation still is sufficient to inactivate CDKs, it seems intriguing
remains obscure. But this is precisely the case, that this tyrosine is conserved in CK2 (see fig. 1), but
exacerbated by the fact that CK2 is one of the most not in the great majority of protein kinases. It is
pleiotropic kinases, impinging on myriad substrates disappointing therefore that this tyrosine cannot be
and implicated in cell proliferation and shown to be phosphorylated by tyrosine kinases.
transformation. This situation appears even worse
compared with other kinases of the same branch, In summary there is no evidence whatsoever that
MAP kinases, CDKs and GSK3, which all fall into the CK2 might undergo tight control through
wide category of kinases, the activity of which is phosphorylation/ dephosphorylation, although it
triggered by phosphorylation within their 'activation cannot be ruled out that autophosphorylation
loop' [40, 84]. In the case of MAP kinases two and/ or phosphorylation by proline-directed kinases,
residues within the loop (T183 and Y185) are shown to occur both in vitro and in vivo, might subtly
phosphorylated by dual-specificity Mek (itself a tune some properties of CK2. In particular,
kinase with a phosphorylatable ac·tivation loop), autophosphorylation at the N -terminus of the ~­
while in CDKs a single threonine is phosphorylated, subunit, occurring through an intramolecular
T160 in CDK2 (see fig. IE). In both cases mechanism [85], has been shown to correlate with a
phosphorylation is heterologous, while with other modest decrease of activity [54] in accordance with
kinases (e.g. PKA, many tyrosine kinases) an the observation that the autophosphorylation site is
autocatalytic phosphorylation occurs. Inspection of functionally related to and possibly physically
the activation loop of CK2 (fig. IE) reveals that it associated with the acidic cluster responsible for the
contains no Ser /Thr residues, although it does have down-regulatory properties of the ~-subunit [55].
one tyrosine residue. However, despite several This finding could account for an early observation
attempts, no substantial phosphorylation of CK2 by [86] that CK2 is slightly, yet significantly, more active
tyrosine kinases has been detected. The failure of if it is assayed in the presence of protein
CK2 to fulfil the activation loop phosphorylation phosphatases that presumably keep it in a
rule is hard to accept since CK2 falls into the dephosphorylated state. In contrast it cannot account
category of 'RD kinases', in which the invariant for the plethora of reports that appeared between
catalytic aspartate (DI56) is preceded by an 1987 and the early nineties, supporting the view that
arginine, the neutralisation of which by the CK2 phosphorylation correlates with short term
activation segment phospho residue is required for increase in activity in response to serum, hormones
catalysis [40). Two exceptions are provided by and growth factors. A compilation of references
phosphorylase kinase and CKI (mammalian), relating to this can be found in [87], where most of
where a glutamate and an asparagine, these purported effects were re-evaluated and
respectively, substitute for the phosphoresidue ultimately dismissed on the basis that no
and interact with the crucial arginine, ensuring reproducible increases of CK2 activity were observed
that the catalytic site has a constitutively active in response to the treatments previously described.
conformation [40]. In CK2 a/a' the residue
homologous to CDK2 Thr-I60 is an asparagine, and a Another intriguing analogy between CDKs and
glutamic acid is located two positions upstream. It CK2 is provided by the cyclins, which assist CDKs
will be interesting to see if CK2 inactivated by with a third mode of regulation: the activity of CDKs
mutating these residues. However, although such a is dependent upon their association with cyclins, the
result would account for the constitutive activity, it . concentration of which varies throughout the cell
would not answer the question as to Iww CK2 is cycle. Abrupt proteolysis will deprive an individual
regulated. CDK of its cognate cyclin, leaving it in an inactive

85
L. A. PINNA AND F. MEGGIO

form until the next increase in the concentration of immunochemical methods would still detect
eyelin (reviewed in [88, 89]). Apart from differences stoichiometric amounts of a and ~ in the same
in quaternary structure (dimeric vs. tetrameric), the compartment, as if canonical heterotetramers were
association of cyelins with CDKs is reminiscent of there. It is also likely that once extracted and
that of the ~-subunit with the catalytic subunits of submitted to purification procedures these separated
CK2. Like eyelin, the ~-subunit is required for full a and ~ subunits would dissociate from their
activity (at least in vitro with peptide substrates) and, temporary partners and give rise to the 'regular'
as discussed earlier (see section entitled ''Structure of holoenzyme which is also much more stable to
the ~-subunit"), it contains a motif similar to the proteolytic degradation than isolated subunits, thus
destruction box that targets proteolytic degradation accounting for the failure to detect forms of CK2
of eyelin. However, there are two strong arguments other than the heterotetramer during purification.
against the hypothesis that the 'Merry Widow' This would also be consistent with the early and
model of CDKs/cyelins may apply to CK2. These puzzling observation that a relatively high salt
are, first, the extremely high affinity of ~ - a concentration is needed in order for CK2 to bind to
interactions, resulting in no detectable exchange phosphocellulose, the first-choice resin for its
between bound ~ and the large excess of free ~­ purification [93]. At low salt concentration CK2 does
subunits (unpublished data); and second, the not bind, while, once bound at 0.25 M NaCl it needs
observation that the half-lives of the catalytic and ~­ a very high salt concentration (up to 0.7M) to elute it
subunits are quite similar [7] and, apart from special [93].
cases, excess of the a over the ~ subunit has not been
described (rather the opposite has been reported [90, Despite all these caveats, which may open new
91]). perspectives on the regulation of CK2a before
and/or independent of association with ~-subunit,
It is still conceivable, however, that before the we have to admit that it is very unlikely that the
tight a-~ links are formed other ligands might heterotetrameric form of the holoenzyme is just an in
interact with the a-subunit, inducing changes in vitro artefact which does not exist in vivo. Thus, we
activity and possibly slowing down its assembly are left with two main questions: first, what is the
with ~. Such a possibility appears strengthened by role of the ~-subunit? Second: if the ~-subunit is a
the observation that assembly of CK2 holoenzyme in 'regulatory' subunit, how can the activity of CK2 be
HeLa cells nuelei, where the free subunits are reversibly modified through it?
separately imported, is a slow process [7]. This study
has shown that the half-lives of the three CK2 Until a few years ago the answer to the first
subunits are similar (in the range of 24-29 h) and that question appeared self-evident: reconstitution
a chase of 10-14 h is required to reach complete experiments had repeatedly shown that the ~­
complex formation for the a2~2 form. Even if, as one subunits were required for optimal catalytic activity.
of the authors argues, these low values reflect an Today, however, this dogma has become open to
exchange of subunits into the existing complex, question. First, it has become evident that with
rather than true rates of complex assembly (Marshak, certain substrates, notably with calmodulin, the
personal communication), it must still be assumed addition of the ~-subunit has a dramatically negative
that a and ~. not combined to each other, are effect, causing full inhibition of phosphorylation [53,
available at certain times. It is not elear what it is 94]. Moreover, such a down-regulatory potential of ~
within the cell that slows down a process that is also operates with canonical peptide substrates,
virtually instantaneous when the recombinant a and where it is normally masked by the predominant
~-subunits are combined in vitro. It is conceivable, positive effect. This effect has been uncovered by
however, that during these lags the a-subunit might generating mutants (altered in the 55-64 acidic
come in contact with ligands that hamper its eluster) that are hyperactivatory with peptide
association with the ~-subunits. Pertinent to this is substrates and no more inhibitory with calmodulin
the observation that the stellate protein can interact [53]. The objection that calmodulin is unique in this
with the a-subunit and substitute for some functions respect does not hold since a higher phosphorylation
of the ~-subunit, although not others (e.g. stimulation by a as compared to holoenzyme is also observable
by polylysine) [92]. Likewise, other known ligands of with NDPK (unpublished) and with MDM2 [95] and
CK2a, e.g. HSP-90 [34], nueleolin [35], PP2A [39], it is to be expected that all substrates whose
could bind to the free catalytic subunit, hindering or phosphorylation by CK2 in vitro is almost fully
slowing down the assembly of the canonical dependent on polylysine (e.g. ODC, elathrin b-chain)
heterotetramer. will be better phosphorylated by the free a-subunit
than by the holoenzyme. Moreover, the overall effect
The same may apply to the free ~-subunit, many of the ~-subunit seems to depend on a variety of
ligands of which are being identified and in which an conditions since, under special circumstances the ~­
NLS motif is lacking. It should be noted that subunit has also been shown to decrease the
according to this hypothetical scenario phosphorylation of peptide substrates [96]. The

86
CHAPTER 7/ PROTEIN KINASE CK2

dogma that ~ is required merely to ensure optimal the Ji-subunit; whereas, on the other hand, polybasic
activity of CK2 is also contradicted by the peptides, which alone are capable of triggering all-
observation that in some organisms monomeric or-none effects like those expected of acute
forms of CK2a, devoid of the ~-subunit, exist, and by regulation, can hardly be considered mediators of
experiments showing that in S. cerevisiae in which short-term reversible regulation. Among the
both a and a' genes were disrupted viability was naturally occurring basic proteins that mimic
rescued and the normal phenotype restored by polylysine, histones deserve attention in view of the
expression of the Drosophila a subunit, which is fact that CK2 concentrates in nuclei, where
unable to assemble with the endogenous ~ and W phosphorylation of calmodulin at the same sites
subunits [8]. The different behaviour of S. pombe, affected in vitro by CK2 supplemented with
where disruption of the ~ gene is detrimental and polylysine has also been shown to occur [99]. On the
causes a drop in CK2 activity [97], could be other hand it should be emphasised that calmodulin
explained by assuming that S. pombe CK2 catalytic phosphorylation by CK2 holoenzyme is neither
subunits are intrinsically poorly active and that in promiscuously triggered by any kind of long basic
this special case the p-subunit is required to achieve stretch (only some histones and protamines are
sufficient activity. Consistent with this interpretation, effective) [53] nor requires a large number of basic
the p-subunit acidic cluster responsible for negative residues, as a short peptide reproducing the basic
regulation is not conserved in S. pombe, suggesting stretch of CK2 a between subdomains II and III
that this p subunit is solely designed for up- (which also includes the nuclear localisation signal)
regulation. In vertebrates, as in S. cerevisiae, the a- can induce the same effect [98]. This makes it
subunit alone is functionally autonomous, as in conceivable that proteins which include suitable
transgenic mice its expression is sufficient to basic motifs, possibly including some of the many
generate lymphomas [11] (see section entitled "CK2 cellular partners of CK2~ (see below), might
in neoplasia: a vicious circle?"). It would be overcome down-regulation by ~, triggering the
interesting to see whether p-subunit co-expressed targeting of protein substrates the phosphorylation
with a potentiates or attenuates the oncogenic of which is otherwise inhibited by this subunit. In
potential of the latter. This could tell us if, as far as this connection a breakthrough may come from a
the substrates implicated in tumorigenesis are recent study of the phosphorylation of the MDM2
concerned, the predominant function of p in vivo is to protein inhibitor of p53. This protein, the
up- or to down-regulate the activity of CK2. phosphorylation of which is catalysed by the isolated
CK2a subunit more efficiently than by the
With regard to the second question - can the p- heterotetrameric holoenzyme (like in the case of
subunit mediate reversible regulation of CK2? - two calmodulin), is stimulated by the carboxy-terminus
classes of cationic compounds are known to affect of p53, mimicking the effect of polylysine [95]. A
the activity of CK2 by interacting with the ~-subunit, similar stimulatory effect is exerted by another
polyamines (particularly spermine) and polybasic partner that interacts with p, FGF-2 [1(0). In this case,
peptides, e. g. polylysine and some histones. Despite however, it is not known whether FGF2 operates by
their similar stimulatory effect and their common mimicking the effect of polylysine, although the
polycationic nature these two classes of effectors predominance of basic residues in it would suggest
operate in different ways as they interact with that this may be the case.
partially different regions of the p-subunit and only
the latter are capable of triggering the The discovery of an increasing number of
phosphorylation of calmodulin by CK2 holoenzyme. proteins capable of interacting with the p-subunit of
In other words, while spermine potentiates the CK2 opens new perspectives on the regulation of this
positive effect of the p-subunit (being equally kinase. Although a few such 'interacting partners'
effective whether p wild type or 'hyperactivatory' p (e.g. p53) were known some years ago, in most cases
mutants are used to reconstitute the enzyme it has been the recent use of the two-hybrid system
[unpublished results», polylysine and similar that has paved the way towards their detection. By
polybasic peptides reverse the negative effect of the applying this approach to a HeLa cell cDNA library
~-subunit. It is curious that spermine counteracts the Boldyreff and Issinger [59] isolated more than 1000
activatory effect of polybasic peptides in a dose- clones, and they have calculated that 164 of these
dependent manner, despite the fact that they bind to represent strong interacting partners of CK2~. Only
distinct sites. This leads to the paradoxical outcome some of these have so far been identified by these
that, under certain circumstances, spermine can workers or by other groups. However, the proteins
operate as an inhibitor of the activity of CK2 [98]. identified include A-Raf [62] , the ribosomal protein
L5 [101], FGF-2 [100], Nopp140 [58], ferritin heavy
The problem with these polycationic effectors is chain, a-prolyl-4-hydroxylase, catepsin-C, UBE1,
that, on the one hand spermine, which can be HSP70, calmodulin and Raf-1 (c. Cochet and O.
regarded as a bona fide second messenger, displays Filhol, personal communication). Except in few cases
only a collateral effect by potentiating stimulation by it is not known which functional consequences the

87
L. A. PINNA AND F. MEGGIO
Table 3. Alphabetical list of proteins phosphorylated by protein kinase CK2. Proteins without reference are referenced in (12) or (109).

Al (human hnRNP) HDAgs (Hepatitis 0 virus antigens) [134]


ABF-l (yeast) [110] HIV -1 Rev protein [135]
Adenovirus Ela HIV-1 viral protein
Androgen receptor HMG-14
c-jun HMG-l
c-Myb HMG-Iike protein PI
c-Myc hnRNP
Ca2+ channel blockers receptor HPVE7
Caldesmon Hsp90
Calmodulin Human centrom. protein B (CENP-B) [136]
Calnexin Human complement protease Clr [137]
Calreticulin (spinach) [111] Human estrogen receptor [138]
Calsequestrin IGF-II receptor
Caveolin [112] IGFBP-l
CDC37[113] IkBa [139]
CD45 tyrosine phosphatase [114] IkB~ [140]
CIathrin light b-chain Inhibitor-2 of PPI
Coactivator pIS (PC4) [115] Insulin receptor
CREB IRS-l
CREM LD lipoprotein receptor
CTP:phosphocol. cytidyltransferase [116] Lipoprotein inhibitor
DARPP-32 Mannose-6-phosphate receptor
DNA ligase MAP-IB
DNA topoisomerase I Max protein
DNA topoisomerase II MDM2 [95]
DSIP peptide Measles virus P-protein [141]
Dynamin [117] MEF2C (myocyte enhancer factor) [142]
Dystrophin MRFs (MRF4 and MyoD) [143]
E47 [118] mRNA particles
EF-l 0 [119] mUBF
EF-l~ MYCN (human neuroblastoma cell)
Egr-l (early growth response) [120] Myosin heavy chain
eIF-2a [121] (brain, smooth and skeletal muscle)
eIF-2~ Myosin light chain
eIF-3 N-myc
eIF-4B NBP-60 (NLS binding protein) [144]
eIF-5 Nef
eIF4e/p20 (5. cerevisiae) [122] Neural cell adhesion molecule L1 [145]
Engrailed protein (Drosophila) [123] NIPP-l [146]
Epstein-Barr Nuclear Antigen 2 nm23/NDPK [147]
Epstein-Barr SM P-protein [124] Nuclear DNA-binding protein p210
Epstein-Barr virus ZEBRA protein Nucleolar p130 [148]
Fibrinogen Nucleolar protein B23
Filaggrin Nucleolin
FK506 binding protein Nucleoplasmin [149]
Fragmin (Physarum polycefalum) [125] Ornithine decarboxylase
Furin [126] Osteopontin
Gap43 (neuromodulin) Po, PI and P2 ribosomal proteins
GB glycoprotein (cytomegalovirus) [127] p120 cell proHf. nucleolar protein
GBF-l transcr. factor (Arabidopsis) [128] p13 and p38 yeast ribosomal proteins [150]
Glycogen synthase p25 (Xenopus laevis) [151]
Glycophorin p34 (chloroplast ribonucleoprotein)
Glycyrrhizin [129] p34cdc2
gp96 (soybeans) [130] p38 RNA-binding protein [152]
GRP94 of sarcoplasmic reticulum [131] p53
Guanine nucleotide exchange factor p65 synaptic vesicles
HASPP28 (rat brain) [132] p98 (sea urchin egg)
HCP (hist.-rich Ca++ bind. protein) [133] Pea lamin like protein

88
CHAPTER 7/ PROTEIN KINASE CK2

PHAS-1 [153] Sperrnin binding protein


PKA R-II subunit Spi-B/Spi-1 hematop. transcr. fact. (160)
PKC Stathrnin [161]
Platelet Va and VIlla factors SV40 large T antigen
PP2C Synaptotagrnin
pp35 proliferation nuclear P-protein T-substrate (wheat germ)
pp65 (human cytomegalovirus) [154] Tal-1 [162)
Progesterone receptor [155] Tau protein (163)
Proteasome (30 kDa) TFIIA coactivator pIS (164)
Proteasome complex (CB and C9) (156) TRa2 (thyroid hormone receptor) (165)
Prothymosin a Troponin-T
Pseudorabies virus pp-62 Tryptophanyl-tRNA synthetase [166)
PU-1 transcription factor Tubulin
RAB-17 VAMP / synaptobrevin [167)
Rat epididymal fat cell p22 Viral P-protein
Respiratory syncytial virus P-protein [157) Vitamin D receptor
RlPP VP1 (polyoma virus capsid) [168)
RlPP-I and -II phosphophoryns (158) VpU (HIV-l) [169]
RNA polymerase I VSV (ves. stomatitis virus) P-protein
RNA polymerase II VZV (varicella zoster virus) protein
RNA polymerase III (159) XFG-5-1 (Xenopus zinc finger) protein [170]
sarcalumenin (133) xNopp180 (Xenopus laevis) [171)
Serum response factor Yeast SRP-40 (homologue to Nopp140) [172)
Spectrin ZFPs (Xenopus laevis) (173)

binding of these 'partners' might have. It is to be kinase remains unchanged. As discussed elsewhere
expected, however, that at least some of these [106), the acidic nature of phosphoacceptor sites
interacting molecules will impinge on the regulatory affected by CK2 suggests that the phosphatase
properties of the ~-subunit, ultimately altering the counterpart of CK2 must be PP2A, as it is the only
catalytic activity of CK2, as this appears to be so in Ser /Thr phosphatase that tolerates acidic residues on
the case of p53 (102). the C-terminal side of the phosphoaminoacid [106). It
may be worth noting in this connection that there are
Another way in which CK2 might be regulated is some intriguing analogies between PP2A and CK2.
suggested by the observation that under certain PP2A has a constitutive regulatory subunit which,
circumstances the tetrameric holoenzyme tends to like CK2~, does not exert acute control of catalytic
aggregate giving rise to high molecular weight activity, although its modulation seems to be
polymers [103-105). Depending on the salt mediated by a variety of interacting proteins [107,
concentration, three kinds of supramolecular forms 108). This is reminiscent of the 'interacting partners'
of CK2 have been detected, 'rings', 'thin' filaments, of CK2 ~ discussed above. In the light of this it
and 'thick' filaments [105]. It has been suggested that appears even more intriguing that PP2A is itself a
physiological salt concentration and saturating partner of CK2a [39].
substrate concentration would favour tetrameric
rings ([a2~2)4), rather than the canonical holoenzyme SUBSTRATES: AN UPDATE
(105). The actual occurrence of these aggregated
forms of CK2 within the intact cell and their possible One of the paradoxes in the CK2 story is that,
physiological relevance remain to be established. after having been a kinase without substrates for two
decades (the only ones known being foreign: casein
As a final point one should remember that and phosvitin), it suddenly turned out to be one of
regulation of constitutively active protein kinases the most pleiotropic kinases known [9). The list of
refractory to any other kind of control can be substrates of CK2, which in 1980 included just three
eventually afforded by protein phosphatases proteins, had increased to 35 proteins by 1990 [12),
impinging on their phosphorylatable substrates. and to 99 proteins by 1993 (109). Table 3 presents a
Mutatis mutandis, a pertinent example could be that list of 162 proteins that were known to be substrates
of cyclins, the changes of intercellular concentration of CK2 at the end of 1996, although there is no
of which are crucially dependent on their proteolytic pretension that this is complete.
breakdown [89). Although it involves considerations
of cellular energy expenditure, it is plausible that, by It is possible that in a few of these cases the
analogy, the phosphorylation state of some or all of identification of CK2 as the physiological
the targets of CK2 may depend on oscillations in phosphorylation agent is not incontrovertible. Often
protein phosphatase activity while the activity of the identification is based on the finding of a clear-cut

89
L. A. PINNA AND F. MEGGIO

CK2 signature sequence surrounding the site of activity); phosph~lation-independent activation of


phosphorylation in vivo, corroborated by the parallel CK2 a by the p34 c2 / cyclinB complex, in vitro [177];
demonstration that the same site is phosphorylated and inclusion in the list of CK2 substrates (table 3) of
by CK2 in vitro . As outlined above (see section many proteins known to playa role in cell division
entitled "Catalytic properties and specificity") this and proliferation. Other arguments however are
might cause mistaken inferences for G-CK because of more pertinent and stringent, such as the observation
the partially overlapping site-specificity of G-CK and that micro injection of active CK2 into Xenopus
CK2 (see also table 1). This caveat, however, is oocytes accelerates meiotic maturation induced by
limited to a minority of proteins in table 3, e.g. furin mitosis-promoting factor [178], and the inhibition of
and the mannose-6-phosphate receptor, which are serum-induced cell cycle progression by
associated with the Golgi apparatus where G-CK microinjection of antibodies against the ~-subunit of
predominates over CK2, whereas in other subcellular CK2 into Go-synchronised human fibroblasts [179].
compartments G-CK is virtually absent [4]. Incidentally this latter result supports the view that
the competent form of CK2 in this case is the
Even more striking than the number, is the nature canonical tetramer including the ~-subunit, and not
of the substrates listed in table 3, many of which are the free catalytic subunits.
implicated in a wide variety of cellular functions
(reviewed in [1]). A common denominator of the Additional incontrovertible evidence for a cause-
majority of substrates of CK2 is their participation in effect linkage between CK2 activity and cell cycle
signal transduction pathways or in biochemical progression in S. cerevisiae was provided by the
events triggered by those signals. Especially relevant Glover group which generated five independent
to this review are the many proteins in table 3 that temperature-sensitive alleles of one of the genes
playa role in gene expression, protein synthesis, cell encoding the CK2 catalytic subunits (CKA2) [113].
division and proliferation. Many of these are also One strain arrested within a single cell cycle, and the
targets for CDKs, although, as discussed above (see analysis of the arrested cell population showed that
section entitled "Catalytic properties and specificity") they were in Gt. The conclusion that CK2 is required
the CK2 and CDKs sites are rigorously differentiated in Gt was confirmed by flow-cytometry of
by mutually incompatible consensus sequences. hydroxyurea-synchronised cells, which, in addition,
indicated that CK2 is also required for cycle
REQUIREMENT IN CELL DIVISION CYCLE progression in G2 and/or mitosis. A requirement for
CK2 during Gt is consistent with data from
It has been emphasised from the very beginning mammalian systems, notably the experiments
of this review that CK2 is essential for viability. This involving microinjection of anti-CK2~ antibodies, in
was unambiguously shown in S. cerevisiae, where which cells were inhibited at multiple points in Gt
disruption of CK2 genes is lethal [8]. Genetic [179], and reports of increased concentrations of CK2
manipulations in Dictyostelium discoideum [20] and S. just before the GtiS transition [180, 181]. On the
pombe [174] support the same conclusion. An other hand a function of CK2 downstream of mitotic
important outcome of the study on S. cerevisiae, CDK activity (supported by its requirement in
which implicitly pointed to cell division as the event G2/M) would be consistent with the dramatic
for which CK2 may be indispensable, was the increase of phosphorylation of CK2 a and ~ subunits
phenotype of the defective cells, which continued to at CDK target sites found in animal cells arrested in
grow after cell cycle progression was arrested, and mitosis [49].
retained significant capacity for protein and DNA
synthesis [8]. This argues against the possibility that Although the targets of CK2 during the cell cycle
cell cycle arrest caused by disruption of the CK2 gene are still unknown, Hanna et al. [113] speculate that,
is an indirect consequence of a general decline in besides cdc28 (the S. cerevisiae homologue of p34cdc2)
metabolic activity and/or biosynthetic competence. itself, other potential candidates in Gt could be cdc37
Moreover, some of the cells arrested by CK2 and DNA ligase I, both substrates of CK2 (see table
depletion exhibited an elongated bud, a phenotype 3). In G2/M they suggest the prime candidate to be
shared by several cell division cycle mutants [175]. topoisomerase II, for which physiological targeting
by CK2 is well documented [182], and the
The implication of CK2 in cell division would also implication of which in CK2-mediated functions is
be consistent with a variety of additional supported by a number of coincidental observations
observations. Some of these are merely [113].
circumstantial: e.g. the phylogenetic relatedness of
CK2 and the cell division cycle kinases; the ability of Another plausible pathway by which CK2 could
CK2 to phosphorylate the cell division cycle 'engine', affect the cell division cycle is more indirect: through
p34cdc2 [176] and to be phosphorylated on both its a inhibitor-2 (1-2) of protein phosphatase-I. Activation
and ~-subunits by CDKs [49, 63] (although these of 1-2 requires its preliminary phosphorylation by
phosphorylations do not seem to have any effect on CK2 at seryl sites which potentiate secondary

90
CHAPTER 7/ PROTEIN KINASE CK2

phosphorylation of regulatory Thr-72 by GSK3 [107, accompanies the onset of tumors. It is therefore no
183, 184]. During mitosis 1-2 activity increases [185], surprise that CK2 is elevated, not only in 'normal'
affecting PP1, the activity of which consequently cell proliferation, but also in neoplastic tissues. This
declines [88]. This prevents dephosphorylation (and is documented by an impressive number of reports
inactivation) of the dual phosphatase cdc25 which, in [10] dealing with a wide variety of pathological
consequence, can activate cdc2 by dephosphorylating situations, including hepatoma, leukemic cells,
its down-regulatory T14/Y15 site (see above). benign prostatic hyperplasia, immortalised cell lines
Through this cascade of events CK2 would and several solid tumors such as colorectal, bladder,
ultimately trigger the activation of cdc2 and drive on kidney and mammary carcinomas. This rises the
mitosis. crucial question as to whether the increase of CK2
observed in all these cases is just a consequence of
The demonstration that CK2 is required for cell proliferation or may have a causative effect on
progression through the cell division cycle, although the onset of at least some types of tumors.
the mechanistic rationale for this requirement is still
unknown, accounts for many reports showing that Some observations argue in favour of a
CK2 invariably rises in proliferating cells. This relationship between the extent of transformation
general rule applies during embryogenesis [186-190] and the increase in CK2.Thus, the mean activity of
and larval development [191]. These studies showed CK2 increases on passing from colorectal mucosa to
that not only does CK2 tend to be higher on average adenomas and from adenomas to carcinomas [198],
during fetal development than in the adult, but it suggesting a gradual enhancement with stage,
also undergoes cyclic oscillation and tissue-specific according to the concept that colorectal carcinomas
variation [192]. Other 'normal' proliferating tissues arise from adenomas. Likewise a statistically
in which similar increases of CK2 have been significant correlation between CK2 and the 'grade'
observed include regenerating liver [193, 194] and of tumors was found on analysing kidney and
intestinal colonic mucosa, where the very telling bladder carcinomas [199, 200]. On the other hand the
observation was made that CK2 is particularly somewhat paradoxical situation of prostate has been
elevated in the cell layer at the base of the crypts reported, where the increase of nuclear CK2 is much
which also is characterised by an especially high more dramatic in benign hyperplasia than in
proliferative activity [195, 196]. In the light of these carcinomas [201]. This is not entirely surprising
and other observations the proposal that CK2 should however if it is considered that prostatic carcinomas
be considered a 'proliferation marker' [197] still do not seem to develop from hyperplastic tissue.
holds.
What is definitely striking is the general validity
The elevated activity of CK2 found in the basal of the 'CK2 increase' rule in tumors of totally
cell layer of the colon was accounted for by a high different origins. For example, CK2 is elevated in
level of expressed CK2, as documented by human leukemic cells [202], in virus-transformed
immunochemical methods [196]. This is likely to murine lymphocytes [203], and even in bovine T-cells
apply to all proliferating tissues and would be transformed by the parasite protozoan Theileria paroa
consistent with the requirement of CK2 for the which causes a leukemia-like disease of cattle [204].
progression of the cell division cycle, as discussed While this could be interpreted to suggest that the
above. However, it is also possible that CK2 increase in CK2 activity is a consequence, rather than
expressed in proliferating tissues might have a cause of lymphoid transformation, a causative
distinctive features as suggested by altered kinetic effect of CK2 on the onset of leukemia has been
constants of CK2 from fetal liver [187] and by the demonstrated by the over-expression of CK2 in T
intriguing observation that a third type of a subunit, cells transformed by T. parva. To investigate the
termed a3, smaller than both a and a', and possibly possible role of CK2 in the pathogenesis of
proteolytically generated from these, is abundant in lymphoproliferative disorders, the a-subunit of CK2
CK2 isolated from the nuclei of regenerating liver was expressed in the lymphocytes of transgenic
[194]. Also pertinent to this may be the finding that mice, giving rise to a stochastic propensity to
treatment of murine fibroblasts with serum develop lymphomas [11]. Even more interesting,
specifically evokes the appearance of a' mRNA such a moderate tumorigenicity was dramatically
which is already evident two hours after treatment enhanced by mating CK2 a with c-Myc transgenic
(Oliviero, personal communication) mice. This gave rise to bi-transgenic offspring with a
marked increase in the incidence of
CK2 IN NEOPLASIA: A VICIOUS CIRCLE? lymphoproliferative disease [11]. The oncogenic
potential of the catalytic subunit of CK2 was
There is no doubt that proliferation and subsequently confirmed using another experimental
transformation are quite distinct events, as different, model taking advantage of a transgenic mouse line in
grosso modo, as health and illness. However, it is also which mis-expression in thymus of tal-l (the product
undeniable that cell proliferation invariably of the TAL-l gene the ectopic activation of which

91
1. A. PINNA AND F. MEGGIO

occurs in human T-cell acute lymphoblastic with the finding that, at least in some cases, such an
leukemia) causes leukemogenesis [205]. This was increase in CK2 is the definite cause, rather than just
dramatically accelerated by transgenic coexpression a consequence, of tumor onset. The fact that
of CK2 a, providing a second example of a situation potentially oncogenic agents/events, whatever their
in which CK2 a has a synergistic effect in causing mode of operation, need to induce a mitogenic
lymphomas. A third example has been provided response implies that CK2 will always be involved
by experiments that demonstrate quite a dramatic in, and in some cases could be critical for, reaching a
acceleration of lymphoma by CK2a in p53 'threshold of disregulation' leading to neoplasia.
heterozygous and homozygous knock-out mice
(D. C. Seldin, personal communication). If this hypothesis is correct, CK2 will become an
attractive target for potential anti-neoplastic therapy
Since both c-Myc and tal-1 are substrates of CK2 because of its implication, as a contributing, yet
(see table 3) it would be tempting to suggest that the critically causative, agent in a wide spectrum of
oncogenic potential of CK2 is mediated through its tumors. More important, because its complete
ability to phosphorylate and hyper-activate inhibition would neither be required nor desirable,
transcription factors. This seems not to be the case, an attenuation of the activity of CK2 might be
however, at least with tal-I, the phosphorylation of sufficient to suppress its oncogenic potential. In this
which was not significantly increased in the tal- connection it is pertinent to note that in lymphomas
l/CK2a leukemic cell lines. This finding, in promoted by transgenic expression of CK2 in mice
conjunction with the failure of attempts to co- [11] the excess of CK2a mRNA over that in non-
immunoprecipitate tal-1 and CK2 or to observe any oncogenic situations was less than 20%.
further up-regulation of tal-I mRNA levels in the tal-
l/CK2a bitransgenic tumor cells, argues against a ACKNOWLEDGEMENTS
direct effect of CK2 on tal-1 activity or expression,
supporting, rather, an indirect synergism brought We thank Drs. Olaf-G. Issinger (Odense,
about by two independent cascades that may Denmark) and David P. Leader (Glasgow, Scotland)
converge at definite point(s). for reviewing the manuscript. This work was
supported by grants from the Commission of the
On the basis of two well-documented premises, European Communities (Biomed 2), from Ministero
i.e. that the activity of CK2 increases in dividing cells dell'Universita e della Ricerca Scientifica e Tecnologica,
and that a variety of proteins implicated in gene from Consiglio Nazionale delle Ricerche (grant
expression are among its targets, an attractive 95.02920.CT14 and Applicazioni Cliniche della
hypothesis would be that CK2 is implicated in a Ricerca Oncologica), from the Italian Association for
'vicious circle' that could operate in a wide variety of Cancer Research and from the Ministero della Sanita
tumors, irrespective of their origin. It is conceivable, (Progetto AIDS, Istituto Superiore di Sanita).
in fact, that the physiologically high level of CK2
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