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PHA611 LEC 1st Shifting
PHA611 LEC 1st Shifting
Introduction
BOTANY- “Plant Biology”
• Primary producers
-Species having specific features caused then to adapt and reproduce and passed these
features to their offspring.
-Det w/c features are eliminated and passed into next generation.
Counterirritant
Top 10 GMOs
• Biofortified soya beans – pest resistance
• Edible cotton seeds
• Jatropha – biofuel
• Golden rice – inc beta carotene
• Flood resistant rice
• Sugar beets- weed resistant
• Yeast – feed on agricultual waste and excrete crude
oil
• Cassava- Biocassava plus – vit, proteins, virus
resistant
• Papaya- pest resistant
• Castor beans- blocks ricin prodtn, inc castor oil w/c
is used as lubricant in shampoo
http://news.discovery.com/tech/biotec
hnology/ten-genetically-modified-
crops.htm 2012
Plant Characteristics and Diversity
• Religious method
• Metaphysical system
• Speculative philosophy
Religious Method
• Universe is assumed to be created by or to
contain deities.
• Important feature is that the actions of gods
cannot be studied.
• Crops might flourish or fail due to god’s
intervention to reward or punish people
• Faith as fundamental principle of all religion
Metaphysical System
• In addition to natural forces, there are supernatural
, hidden forces that can never be observed or
studied.
Examples:
• luck,
• bad omens,
• accurate horoscopes,
• reliable method for picking the winning numbers
in a lottery
Speculative philosophy
• Started with Greek philosophers
• Sought to develop logical explanations for
simple observations.
• Philosophical postulations of atoms by
Democritus (400 BC)
• Atom- smallest unit
• No verification, no expt were done
Unifying Concepts to understand plants
All living beings have the following characteristics (5); if even one
is missing, the material is not alive
1. Metabolism
Exchange of energy and matter
with the environment must be
present
- Father of Taxonomy
- His system for naming, ranking, and
classifying organisms is still in wide use today
(with manychanges).
SPECIES NAME
○ By convention:
● first word of binomial name is genus and is always capitalized
● second word refers to specific epithet and is not capitalized
○ together form scientific name, written in italics
● a complete scientific name includes the authors name.
Nucleus
• Eukaryotes contain more genetic material than prokaryotes.
• Histones—proteins unique to eukaryotes—combine with the
deoxyribonucleic acid (DNA) to pack the genetic material into compact
chromosomes.
• The nuclear material is enclosed in a nuclear envelope formed of a double
membrane.
• The fluid portion is nucleoplasm (karyoplasm or karyolymph.
• The nucleolus synthesize RNA. The pores are called nuclear pores, for
transport of substances fr nucleus to protoplasm
• Nuclear envelop has nuclear pore
• Nucleoplasm – like protoplasm
• Ass. Of DNA, enzymes, histones, RNA, water
• Chromatin = DNA + histone
• Nucleus & nucleoplasm are different in diff. ages of cell.
• Rapidly div cell= more DNA; young cell = small w/ large nuclei
• Mature cells = large with small nucleus
• Nucleolus – ribosomes are made and assembled
• In some cells, upon maturation, they loose nucleus
• Ex. Conducting cells( sieve tube in phloem), RBC
• Ribosomes –protein syn
• Polysome = ribosome + mRNA
• Legumes – high amt of protein, high in ribosome
• All are membrane bound organelles except ribosome
Endoplasmic reticulum (ER)
• Carries large mol like protein (not transported by diffusion)
• Syst of narrow tubes and sheets of membrane w/c form a network thruout the cytoplasm
• Rough ER – attached to ribosome
• Protein produced as storage product like legumes; remains in ER
• Protein to be secreted ( mucilage, nectar); detach, move to plasma memb, fuse with it and
release its contents by exocytosis
• Smooth ER
• Lipid synthesis, membrane assembly
• Abundant in cells w/c prod large amt of fatty acids
• Cutin/ wax on epidermal cells, oil (palm , coconut, fragrances)
Dictyosomes
• Modifies material secreted by cell ( protein modification), ex.. Addtn of sugar to protein ==
glycoprotein
• Stacks of thin vesicles held together by flat/ curved array
• 2 faces:
• Forming face – where vesicles accumulate, embedded
• Maturing face – where vesicles are released, contents have been processed
• GOLGI Body
• Association of hundreds of dictyosmes
• Cisternae – stacks of wide thin flattened vesicle formed by ER vesicles w/c acc. & fused
together at 1 side of dictyosome.
Mitochondrion- respiratory site of the cells (ATP)
Mitochondrion
• Cell respiration
• Circular DNA, lacks histones, small ribosomes
• Respiration is mediated by enzymes bound to mitochondrial memb
• Cristae- large sheets/ tubes formed by folded inner mitochondrial memb
• Inner Mitochondrial mem- sel. Permeable; with pumps/ channels
• provides room for large # of enzymes
• Matrix – liq, where rxn takes place
Chloroplast- green plastids, captures light for photosynthesis, larger than mitochondrion
Proplastid – small, undifferentiated; simple, few folds inner memb; in young dividing cells
- converted to chloroplast ( light, chlorophyll)
Parts
• Outer memb
• Inner memb, highly folded
• Stroma – inner fluid
• Ribosomes
• Circular DNA, not ass w/ histones
• Folding of Inner membrane forms:inc surface area, inc space for pigments insertion
• Thylakoid- single memb forming stacks of flattened vesicles called grana
• Sel. Permeable; conc of chem inside is diff from the stroma
• Grana – surrounded by liquid stroma
• Photosyn: involves Active transport of H+ into small space to build up an electrical charge
• Grana vesicles are needed to accept the protons from the stroma
• Stroma – area where CO2 ----CHO catalyzed by enzymes
Chloroplast mostly disc-shaped organelles, 4 to 6 micrometres in diameter. They occur most abundantly in leaf cells, where they can apparently orientate themselves to light
Leucoplastids – colorless plastids
rosette
prismatic
styloid
Crystals (CaCO3)
cystolith
• Crystal protect plants from animals
Different plant cells
Alma Howard and S. R. Pelc determined that DNA synthesis occurred during
interphase and designated the phases as G1, S and G2
G1 Phase
• Recovering after cell division, conducts normal metabolism
• Cellular activities arrested during mitosis is reactivated
• Reassembling of the cytoskeleton to support the cell
• Cell enlarges, organelles multiply, DNA of mitochondria and plastids increases
• Synthesis of the nucleotides for DNA replication (S phase)
• Most variable phase (etc.cellular arrest)
S phase
• Gene replication
• Chromatin synthesis ( DNA and histones)
• Self replication of the DNA]
• genome
• Histones
• Chromatid- half of double chromosome
• centromere
Endoreduplication
• Occur in 80% of maturing plant cells
• Results to nucleus w/ many copies of each gene
• In Cells are rich in ribosome, prod large amt of protein
• Occurs in cells w/ rapid intense metabolism
• Ex. Hair, glandular cells
• Gene amplification
• Similar to endoreduplication, but involved some genes w/c are repeatedly replicated
G2 phase
• Begins after chromatin replication, 3-5 hrs
• Preparation for mitosis
• Production of tubulins (alpha & beta) for microtubules
• Production of proteins for processing chromosomes and breaking down the nuclear
membrane
Mitosis
• Duplication division
• 1870 Walther Flemming various stages of chromatin appearance
(mitosen – threads)
• Process of nuclear division
Phases:
1. Prophase
2. Metaphase
3. Anaphase
4. telophase
Mitosis
• prior to prophase, formation of a preprophase band ( microtubules
and acting filaments)
• Determines the position of division
• Plane is perpendicular to the migrating chromosomes
• Disappearance of microtubules signals mitosis ( actin filaments
remain)
Prophase
Early prophase
•Chromatin condenses and appear as mass of elongated threads, coiling of
chromosomes
Early prophase Late prophase
•Shorter and thicker chromosomes
Late prophase
•Visibility of chromosomes appearing as two parallel threads attached at a point
of constriction called centromere
•Disappearance of the nucleoli and nuclear membrane
Metaphase
•Accumulation of parallel spindle fibers (microtubules) near the
chromosomes (spindle apparatus)
•Elongation of the spindle with ends pointing towards opposite poles of the cell
•Attachment of the spindle fibers on the either sides of the centromere of the
chromosomes(kinetochore)
•Unattached fibers (polar fibers)
•Alignment of the chromosomes in a circle around the spindle apparatus forming a
metaphase
plane (metaphase plate)
•Centromere divides
•2 chromatids of each chromosome are free of each other
Anaphase
Herb - annual
Plant Body is composed of primary and secondary tissues
• BUD
• Axillary
• Vegetable
• Floral
• terminal
Tissue –group of cells that perform specific function
• Classification:
1. Based on stage of development
a. Embryonic or meristematic
b. Permanent
2. Based on composition
a. Simple
b. complex
Meristematic – tissues where the cells are in the mitotic state
Classification:
1. Based on initiating cells
a. Primary meristem (primordial meristem)
b. Secondary meristem
2. Based on position in the plant body
a. Apical
b. Intercalary
c. lateral
3. Based on function
a. Protoderm (DERMATOGEN)
b. Procambium (PLEROME)
c. Fundamental or ground (PERIBLEM)
Overview of primary meristems and tissues
Permanent – cells are stable, no longer dividing
- differentiated into 2 types
Types:
1. Simple permanent tissue
- composed of one type of cells
- differentiated into dermal or protective and ground or fundamental
2. Complex permanent tissue
- composed of different kinds of cells but perform similar function.
Epidermis
(simple dermal)
• Outermost surface of a herbaceous stem, leaf, root
• Uses:
• protection
• Regulate exchange of materials
• Encrusted with cutin (cuticle)
• Contains guard cells,
• Composed of parenchymals cells
• Open guard cell – absorb water; closed – lose
water
• Stomata = guard cell + stomatal pore
Guard cells
Epidermis
• Accessory cells – serves as reservoir of water and
ions
• Bulliform cells – longitudinal rows of
vacuolated cells
- loss turgor pressure
• Epidermal hair/ trichome – elongation of the
epidermal cell outward (trichome and root
hairs)
• Differences:
1. Location 3. structure
2. Function
Trichomes – Epidermal Outgrowths / Hairs
Root hairs of
germinated seed
Cork or Phellem
(simple dermal)
• w/ chloroplast
• Thin walled, allow light /
CO2 to pass
• Stems grow longer by producing new cells at tips called shoot apical meristem
• Cells expand pushing meristem upward
• Subapical meristem – lower cells producing new cells below
• In subapical meristem:
• Cells --- 1st tracheids or vessel elem ---protoxylem (small)—form cells w/c mature—large
tracheary elem called metaxylem
• Cells ---1st phloem---protophloem (ext cell, shortlived)--- formed cells closed to metaxylem
---metaphloem
• Metaphloem diff to large sieve areas and companion cells
• All cells are expanding : dead functional protoxylem/protophloem, living
undiff metaxylem/metaphloem
• In xylem: all ceased on dividing– become larger as tissue expands
(protoxylem are being stretched)
• Phloem cell continuous to divide so remain small
• Protoderm
• Meristematic epidermal cells, in early stages of differentiation
• Provascular tissue
• Young cells of xylem and phloem
• Ground meristem
• Equivalent stages of pith and cortex
• Subapical meristem
• Consists of protoderm, ground meristem and provascular tissue
The conducting cells of Xylem
1. Tracheids
1. long cells with tapered ends., no
perforations
2. Only type of water conducting cells
in ferns, conifers and most other
non flowering plants.
3. Dead at maturity ( hollow tubular
wall)
4. Secondary wall has pits ( to keep
sclereid alive)
Pits are the gaps in the secondary
walls.
Bordered pits make the opening
narrower, acting like a valve.
Water can pass thru/ bet tracheids
thru pit pairs.
Secondary wall thickenings
• Annular – small amt of 2˚ wall
• As set of rings, weak, large surface area for water movt
• Helical/ spiral – weak, 1 or 2 helices of 2˚ wall
• Scalariform - 2˚ wall covers most of inner wall, for strength
• Reticulate - 2˚ wall is deposited in net shape
• Circular bordered pits – most derived, strongest ( due to borders) tracheary
element
• All primary wall is covered by 2˚ wall , water cant move easily
Secondary Wall thickenings in Tracheids and vessel
elements
Vessel elements
1. Dead at maturity
2. Cell walls form hollow tubes,
3. Wider, shorter, and less tapered
4. With perforation plate (water pass
easily bet vessel elem thru perforation); it
reduces friction
5. Joined together to form a pipe or
tube
In flowering plants, few ferns, gymnosperm
Phloem – food conducting tissues
1. Sieve tube members
- alive and active
- Only primary walls, parenchyma cells
- Presence of sieve plates
- No nucleus
- Forms continuous connection of
cytoplasm from the top to bottom
- 2. Companion cells – nucleated, supply
proteins to sieve tubes
Complex permanent tissues
1. Phloem
- transport dissolved organic compounds (sucrose)
- thin walled primary wall
- primary phloem - procambium
- protophloem – elongating regions (outer); short - lived
- metaphloem – non – elongating regions (inner)
- secondary phloem – vascular cambium
- inner layer of the bark
- sieve elements: sieve cells, sieve tube members (companion
cell)
-plasmodesmata enlarge to form sieve pores
-sieve areas – grp of sieve pores
Phloem
Sieve tubes – vertical rows of
elongated cells
-Possess a protoplasm but no
nucleus
-Walls are perforated with pits
-Perforated end walls serve as strainer
(sieve plate)
RESINS- “AMBER”
-flammable with turpentine
and rosins.
-aromatic
LATICIFERS– secretory cells with primary wall secreting latex; seal wounds and protection
Internal
laticifers