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Thermo Stat
Thermo Stat
1. Given the following table for the scattering lengths of common elements:
estimate the molecular volume (from the molecular weight and density) and then calculate the scattering
length densities of the following molecules, in unit of1010 cm-2: H2O, D2O, Octane, Deuterated octane,
and Pluronic P-84, a tri-block co-polymer, [(PEO)19 (PPO)43 (PEO)19], where PEO = -(CH2)2O-, having
a molecular volume 72.4 Å3, and PPO = -(CH2)3O-, having a molecular volume 95.4 Å3 .
2. Show that the form factor of a spherical particle with an internal core of radius R1 and a scattering
length density (sld) ρ1, surrounded by a shell with an outer radius R2 and sld ρ2, immersed in a solvent
of sld ρs, is given by:
4 3 ⎡3 j1(QR1 ) ⎤ 4 3 ⎡ 3j (QR ) ⎤
F2−shell (Q) = πR1 (ρ1 − ρ2 ) ⎢ ⎥ + πR 2 (ρ2 − ρs )⎢ 1 2
⎥
3 ⎣ QR 1 ⎦ 3 ⎣ QR 2 ⎦
Use this result to calculate and plot the normalized particle structure factor P(Q) of a co-polymer
micelle having an inner core radius R1 and an outer radius R2. In a core-shell model of the micelle [Y.C.
Liu et al, Phys. Rev. E 54, 1698 (1996)], the inner and outer radii can be determined from the
aggregation (N) and hydration (H) numbers of the micelle. Plot the P(Q) for the case of N = 63 and H
= 290.
3. Show that the form factor of a randomly oriented prolate spheroid, with semi-major and minor axes
of a and b, is given by:
4π 2 ⎡ 3j (u) ⎤
Fellipsoid (Q) = ab (∆ρ)∫0 dµ ⎢ 1 ⎥
1
3 ⎣ u ⎦ (2)
u = Q a µ + b (1 − µ )
2 2 2 2
where (∆ρ) is the contrast between the particle and the solvent, µ the cosine of the angle between the
major axis of the spheroid and the Q-vector.
2
4. Derive a normalized particle structure factor P(Q) of a uniform cylindrical particle of radius R and
r
length L. Assuming that the particle is randomly oriented with respect to the Q vector.
(A) Show that:
1
2 2⎡ 2 ⎤
2
1 vv
1 ⎡ sin QLµ / 2 ⎤ 2J (QR 1 − µ )
⎥ ⎢⎢ 1 ⎥ . (3)
iQ ⋅ r 3
P(Q) =< ∫ e d r >= ∫−1 dµ ⎢
1
Vp Vp 2 ⎣ QLµ / 2 ⎦ ⎣ QR 1 − µ 2 ⎥⎦
v
In Eq.3, V p denotes the volume of the particle, r the position vector of an arbitrary point in the
interior of the particle, and µ the cosine of the angle between the axis of the cylinder and the Q-
vector. The bracket means that we are considering an average over random orientations of the
particle.
(B) Show that for a long and thin cylinder, one has asymptotic formulae:
π ⎡ 2J 1 (QR) ⎤ π
2 1 2 2
− Q R
P(Q) →
QL>2 π QL ⎢⎣ QR ⎥⎦ → QL e
QR <1
4
(4)
⎡ sin QL / 2 ⎤
2 1
2 2 − Q L
2 2
P(Q) → 2 2
QR>>1 Q R
⎢⎣ QL / 2 ⎥⎦ → 2 2e
QL<1 Q R
12
(5)
(D) From Eq.4 and 5, one can conclude that for a long rod a ln[QI(Q)] vs Q2 plot, and for a flat disk,
a ln[Q2I(Q)] vs Q2 plot, will result in a straight line at large Q with slopes proportional to R2 /4 and
L2/12 respectively. Explore additional system parameters you can extract from the intercept at Q =
0.
(E) In polymer literature, another approximate formula is often used. It is the limit when R goes to
zero, the so called "stiff thin rod" limit. Show that:
⎡ 2⎤
sin QLµ /
2
⎡ sin xµ ⎤ 2 1 2 x sin u ⎛ sin x ⎞ 2
⎥ = ∫0 dµ ⎢ ⎥ = ∫0 du − ⎜ ⎟ . (6)
1 1
P(Q) = ∫0 dµ ⎢
R→0 ⎣ QLµ / 2 ⎦ ⎣ xµ ⎦ x u ⎝ x ⎠
Explore graphically the difference between approximations of the last equation and Eq. 3
3
5. (This problem is added for your interest only. Your answer is optional. In case you solve it,
you will get a bonus points of 20/100)
Scattering intensity of a Gaussian chain. Consider a flexible polymer chain of a contour length L
=Na, where N is the no. of segments and a is the Kuhn length. If the chain makes a random walk in
space, then the mean square end-to-end distance is R = Na . For this chain, the distribution of
2 2
In order to calculate the normalized particle structure factor of such chain. (a) Start from the
definition:
N N r r r N N r r
∑∑ ∑∑
1 iQ⋅( R i − R j ) 1 iQ⋅ Rij
P (Q) = 2 e = 2 e (8)
N i =1 j =1
N i=1 j =1
gaussian
so that we can evaluate the Gaussian average by integrating the exponential phase factor using the
distribution function given by Eq.7. (b) Show first that :
N N N N
∑∑ ∑ ∑ exp[− 6Q a
1 1 2 1 1
P (Q) = 2 exp[− Rij ] = 2 i− j
2 2
(9)
N i=1 j =1
6 N i =1 j =1
(d) Use the theorem to show that the sum in Eq.9 can be evaluated as:
1 ⎡ (N − 1)α − Nα 2 + α N +1 ⎤
P (Q) = 2 ⎢N + 2 ⎥ (11)
N ⎣ (1 − α )2 ⎦
1 1
where α = exp( Q 2a 2 ) ≈ 1 − Q 2 a 2 , because Qa is much smaller than unity in practice.
6 6
(e) Show that in the limit N → ∞ , P (Q) approach the Debye function
2 1 2 2 1 2 2
P (Q) = (x −1 + e ) , where x = Q R = Q a N
−x
2
(12)
x 6 6
(f) Discuss the small and large Q behavior of Eq.12. In particular, show that:
4
1 1 1
lim = + Q2 R 2 (13)
x→ ∞ P(Q) 2 12