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1 Role of ADME in Drug Discovery (Míriam Zanuy, Biotech App 18 Oct 2021)
1 Role of ADME in Drug Discovery (Míriam Zanuy, Biotech App 18 Oct 2021)
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Outline
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Drug Discovery
&
Drug Development
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Drug Discovery & Drug Development
Pharmaceutical Industry: Facts & Figures
2020 ranking of the global top 10 pharmaceutical and biotech companies based on
revenue (in billion U.S. dollars)
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Drug Discovery & Drug Development
Pharmaceutical Industry: Facts & Figures
Top 10 pharmaceutical products by sales worldwide in 2020 (in million U.S. dollars)
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Drug Discovery & Drug Development
R&D efficiency
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Drug Discovery & Drug Development
Once upon a Time
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Overview of the relevance of ADME in Drug Discovery
What ADME is?
Active drug
Release Desintegration, disgregation and
Pharmaceutical preparations disolution
http://notass.blogia.com/2008/051003-formas-farmaceuticas-solidas.php
http://www.zambon.es/servicios/atlas/fichas/4002.htm
http://www.forocoches.com/foro/showthread.php?t=2252773
Overview of the relevance of ADME in Drug Discovery
Absorption (Realase + Absorption)
Cellular membrane
Penetration
Permeation
Absorption
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Overview of the relevance of ADME in Drug Discovery
D (Distribution)
Blood transport
Liver
Phase I metabolism drug
Oxidated
metabolite
Phase II
metabolism
Conjugated Phase I metabolism:
metabolite Oxidation, reduction and hydrolysis
http://www.escuelapedia.com/las-partes-del-cuerpo-humano-en-ingles/
Overview of the relevance of ADME in Drug Discovery
M (Metabolism)
CYP450
CYP450
FMO (flavin-containing
monooxygenase )
phase I
XAO (Xanthine oxidase)
Esterases
UGT (UDP-
glucuronosyltransferase )
SULT (sulfotransferase)
phase II
NAT (N-acetyltransferase)
Phase I Phase II
Oxidation (CYP450) Glucuronidation/glucosidation
Oxidation (other) Sulfation
Reduction Methylation
Hydrolysis Acetylation
(Hydration) Amino acid conjugation
Other Glutathione conjugation
Fatty acid conjugation
Condensation
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Overview of the relevance of ADME in Drug Discovery
M (Metabolism)
Liver
CYP450
Other fluids
(Salivary glands,
Tear glands..)
Skin
Sweat glands Drug
+
Metabolites
LUNGS
Respiration
KIDNEY
Liver
Urine
Bilis Feces
http://criandoconamor.blogspot.com.es/2011_07_01_archive.html
ADME: Methodology and relevance
in Drug Discovery
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ADME: Methodology and relevance in Drug Discovery
Screening cascade
TPP (Target Product Profile)
Assay complexity
Enzimatic assay
Output
CYPs inhibition PK IV dog Effect duration in animal models
Facilities
Equipment &
Software
Fungible and
biological
goods
Staff
ADME: Methodology and relevance in Drug Discovery
ADME Department
Medical
chemistry
Farmacology
QBCE ADME
Security
Patents Toxicology
Development
Galenic
Development
External
CROs
http://es.123rf.com/photo_2750553_figura-de-la-forma-del-cuerpo-humano-en-3d-aplicable-a-varios-conceptos.html
ADME: Methodology and relevance in Drug Discovery
ADME, some objectives in Drug Discovery
ADME
assays
In vitro In vivo
http://es.wikipedia.org/wiki/Diclofenaco
Drug Discovery & Drug Development
The way to a new drug
Optimised PK profile
DDI identified
ADME issues identified PK/PD in animal models Complete PK profile
Candidate
Feasibility Hit to Lead Lead Optimization
Selection Candidate
► Reference Stds ► Caco-2 ► RBC dist
(ADME profile)
► PAMPA (GIT or Skin)
► Hepatocyte stability ► BBB
► Penetration assay
► Plasma/blood stability ► Metabolite Profile
► PPB
► CYP induction ► Enzyme phenotyping
► Tissue Dist
► Microsomal stability ► Dog PK ► MiniPig or Monkey PK
(PhI, PhII)
► PK/PD studies ► Rat excretion
► Met Id (MS)
► Toxicokinetics
► CYP inhibition
► Bioactivation ► Human PK prediction
(PhI, PhII)
► Rat PK
Donor
well test
compound
in buffer
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ADME: Methodology and relevance in Drug Discovery
ADME assays in Drug Discovery:ABSORPTION
Routinely used in ADME as in vitro model of intestinal absorption
Correlation with gastrointestinal absorption in humans
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(Chen et al. 2008-Pharmaceutical Research)
ADME: Methodology and relevance in Drug Discovery
ADME assays in Drug Discovery:ABSORPTION
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ADME: Methodology and relevance in Drug Discovery
ADME assays in Drug Discovery:ABSORPTION
Passive diffusion
B
Difussion cells
Procedure
Conditions
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ADME: Methodology and relevance in Drug Discovery
ADME assays in Drug Discovery:ABSORPTION
Membrane in Franz cell
Tissue ex vivo (frozen/fresh/cadaver)
Human:
Animals: Hairless Rat, Rat, Hairless Mouse, Mouse, Monkeys, Dogs and
Pigs
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ADME: Methodology and relevance in Drug Discovery
ADME assays in Drug Discovery:ABSORPTION
Human Skin Equivalents (HSEs) Bioengineered substitutes composed
of primary human skin cells
HSEs have two main applications: (keratinocytes, fibroblasts and/or
stem cells) and extracellular
Clinical skin replacements and grafts components (mainly collagen)
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ADME: Methodology and relevance in Drug Discovery
ADME assays in Drug Discovery:ABSORPTION
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ADME: Methodology and relevance in Drug Discovery
ADME assays in Drug Discovery:ABSORPTION
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ADME: Methodology and relevance in Drug Discovery
ADME assays in Drug Discovery:ABSORPTION
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ADME: Methodology and relevance in Drug Discovery
ADME assays in Drug Discovery:ABSORPTION
The progression
From: *A report of t4 – the transatlantic think tank for toxicology, a collaboration of the toxicologically oriented chairs in Baltimore, Konstanz
and Utrecht sponsored by the Doerenkamp Zbinden Foundation.
ADME: Methodology and relevance in Drug Discovery
ADME assays in Drug Discovery: DISTRIBUTION
Conc(bufferchamber )
Drug unbound (%) = × 100
Conc( samplechamber )
Only the unbound fraction (fu) of the drug could cross the cellular
membranes and archive the tissues.
ADME: Methodology and relevance in Drug Discovery
ADME assays in Drug Discovery: DISTRIBUTION
RBC Distribution
The device used is RED also and the principle is the same.
ADME: Methodology and relevance in Drug Discovery
ADME assays in Drug Discovery: DISTRIBUTION
25
20 Blood
Ratio
Liver
15
Brain
10 Lung
Kidney
5
0
0 4 8 12 16 20 24
Time (h)
Homogenization
Centrifuge supernatant
400-500 gmax
Centrifuge supernatant
Liver
12,000-13,000 gmax
Homogenate Centrifuge supernatant
LC MS
(HPLC or Separation NMR
Identification
UPLC) (ICP/MS,
CE radioactivity)
GC
Quantification Synthesis
UV, MS, (need
of standards)
Radioactivity,
ICP/MS
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ADME: Methodology and relevance in Drug Discovery
ADME assays in Drug Discovery: METABOLISM
General
strategy In vitro
In vivo
In silico
Metabolite
generation
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ADME: Methodology and relevance in Drug Discovery
ADME assays in Drug Discovery: METABOLISM
Metabolite
generation
Recombinant
bibliographic information
enzymes
Complexity
Reliability
Blood/plasma
Metasite
Cryopreserved hepatocytes
Freshly isolated hepatocytes
Meteor
Freshly isolated liver slices
InProbable
vivo: plasma, bile, urine, faeces… samples
Plausible
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ADME: Methodology and relevance in Drug Discovery
ADME assays in Drug Discovery: METABOLISM
General
strategy
Protein precipitation
Isolation and SPE
purification LLE
Fraction collection
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ADME: Methodology and relevance in Drug Discovery
ADME assays in Drug Discovery: METABOLISM
Sample preparation
Concentration, isolation and/or purification of generated metabolites
Protein precipitation
Precipitate proteins with organic solvent (ACN) and separate supernatant
by centrifugation
Fraction collection
Valve 2 Valve 1 HPLC
Waste
2 2
4
3
1
6
3
4
1
6
Preparative or semi-preparative LC
5 5
Fracc. 1
Fracc. 2
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ADME: Methodology and relevance in Drug Discovery
ADME assays in Drug Discovery: METABOLISM
General
strategy
MS
Identification NMR
(ICP/MS,
radioactivity)
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ADME: Methodology and relevance in Drug Discovery
ADME assays in Drug Discovery: METABOLISM
Mass spectrometry
Separation Data
MS spectrometer
technique analysis
[M+H+16]+
[M+H]+: 349 365
1.4e6
6.9e5
1.3e6
6.5e5
1.2e6 N
1.1e6
N 6.0e5
5.5e5
1.0e6
5.0e5
9.0e5
4.5e5
HOH2C
8.0e5
H 3C 4.0e5
Intensity, cps
Intensity, cps
7.0e5
3.5e5
6.0e5
3.0e5 HN
5.0e5
HN Metabolite M4 obtained in 2.5e5
4.0e5
vitro (rat liver microsomes) 2.0e5
3.0e5 1.5e5
2.0e5 1.0e5
1.0e5 5.0e4
0.0 0.0
250 260 270 280 290 300 310 320 330 340 350 360 370 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 400
m/z, amu m/z, amu
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ADME: Methodology and relevance in Drug Discovery
ADME assays in Drug Discovery: METABOLISM
[M+H]+: 461
461.3
4.0e7
[M+H+176]+: 637 637.3
5.0e7
3.8e7
4.5e7 3.6e7
3.4e7
4.0e7 3.2e7
3.0e7
HOOC
3.5e7 2.8e7 O
HO
3.0e7
HO Glucuronide obtained in 2.6e7
2.4e7
O
Inten sity , cp s
In te nsity, c ps
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ADME: Methodology and relevance in Drug Discovery
ADME assays in Drug Discovery: METABOLISM
M2
M5
4.0 M6
37oC,
% of metabolite formed
stirring
time 3.0
2.0
rhCYPs: CYP3A4,CYP2D6,CYP2C9,
1.0
Drug CYP2C19 & CYP1A2
COFACTOR: NADPH 0.0
1A2 2C9 2C19 2D6 3A4
Human CYP450
Drug-drug interaction
Inhibition CYP450
Increase plasma levels
Drug A of drug B
Induction CYP450
Drug B
Risk of inefficacy of
is metabolized
drug B
by CYPs http://encontactoconelusuario.blogspot.com.es/2009/03/no-tome-medicamentos-por-su-cuenta.html
ADME: Methodology and relevance in Drug Discovery
ADME assays in Drug Discovery: METABOLISM
Cisapride+Ketoconazole
40
30
20 THERAPEUTIC RANGE
10
0
0 2 4 6 8 10 12 14
Time (hours)
Cisapride is a CYP3A4 substrate and its metabolism was inhibited with other CYP3A4
substrates/inhibitors. It was withdrawn from the US and European markets due to
QT- related problems (2000).
ADME: Methodology and relevance in Drug Discovery
ADME assays in Drug Discovery: METABOLISM
Cryopreserved Hepatocytes
Liver
(rat, dog, human)
0h 24 h 48 h 72 h 96 h
d1 d2 d3 d4 d5 ANALYSIS
PRE-INCUBATION INCUBATION
1: test compounds include rifampicin (CYP3A4) and omeprazole (CYP1A2), as positive controls
2Substrate compound: testosterone (CYP3A4), 7-etoxyresorufine (CYP1A2)
Metabolism
37oC, stirring
Instable compound or electrophile. UPLC-MS/MS
analysis
Cofactors
(NADPH, UDPGA)
Interaction with macromolecules disrupting its function
IDIOSINCRATIC REACTIONS
CYP450
5%
Renal
excretion
GSH
Glutathione
5%
conjugated
N-acetyl-p-
benzoquinonemine NO toxics
(NAPQI)
TOXIC http://historiasveterinarias.wordpress.com/tag/toxicidad/
Pharmacokinetics
Pharmacokinetics studies the temporal course of the drug and metabolites amount and
concentration in the biological fluids, tissues and excretion fluids. It is also related with the
pharmacological response and constituted optimal models to do data interpretation.
Formulation
preparation
Administration
iv, po, it, sc…
(dose, animal number, times)
Sample extraction
Culex UPLC-MS/MS
Automatic recollection of analysis
samples
(Accusampler)
ADME: Methodology and relevance in Drug Discovery
ADME assays in Drug Discovery: IN VIVO
Pharmakinetics parameters
tmax
Pharmakinetics parameters
Vss (l/kg): Distribution volum
Vss (l/kg)
iv route Physiologic human volumes (70 kg)
Plasma volume 0.04 l/kg
High >5
Plasmatic concentration
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