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Sciencedirect: Heterologous Expression of Lolium Perenne Antifreeze Protein Confers Chilling Tolerance in Tomato
Sciencedirect: Heterologous Expression of Lolium Perenne Antifreeze Protein Confers Chilling Tolerance in Tomato
ScienceDirect
RESEARCH ARTICLE
Srinivasan Balamurugan, Jayan Susan Ann, Inchakalody P Varghese, Shanmugaraj Bala Murugan,
Mani Chandra Harish, Sarma Rajeev Kumar, Ramalingam Sathishkumar
Plant Genetic Engineering Laboratory, Department of Biotechnology, Bharathiar University, Coimbatore 641046, India
Abstract
Antifreeze proteins (AFP) are produced by certain plants, animals, fungi and bacteria that enable them to survive upon
extremely low temperature. Perennial rye grass, Lolium perenne, was reported to possess AFP which protects them from
cold environments. In the present investigation, we isolated AFP gene from L. perenne and expressed it in tomato plants to
elucidate its role upon chilling stress. The T1 transgenic tomato lines were selected and subjected to molecular, biochemical
and physiological analyses. Stable integration and transcription of LpAFP in transgenic tomato plants was confirmed by
Southern blot hybridization and RT-PCR, respectively. Physiological analyses under chilling conditions showed that the
chilling stress induced physiological damage in wild type (WT) plants, while the transgenic plants remained healthy. Total
sugar content increased gradually in both WT and transgenic plants throughout the chilling treatment. Interestingly, transgenic
plants exhibited remarkable alterations in terms of relative water content (RWC) and electrolyte leakage index (ELI) than
those of WT. RWC increased significantly by 3-fold and the electrolyte leakage was reduced by 2.6-fold in transgenic plants
comparing with WT. Overall, this report proved that LpAFP gene confers chilling tolerance in transgenic tomato plants and
it could be a potential candidate to extrapolate the chilling tolerance on other chilling-sensitive food crops.
Keywords: Lolium perenne antifreeze protein, chilling tolerance, genetic transformation, transgenic tomato
regions are sensitive to chilling stress and the negative excellent source of antioxidants, phytochemicals such as
effects of chilling stress are known to be higher in these lycopene, β-carotene, ascorbic acid, lutein, tocopherol,
plants, as they lack the cold acclimation mechanism phenolic compounds and it is also cholesterol-free. These
(Thomashow 1999; Chinnusamy et al. 2007). Moreover, compounds are shown to promote positive health benefits
many important food crops such as rice, maize, soybean, like antitumorigenic effects in human system, reduced risk
cotton and tomato are chilling-sensitive, which are unable of cardiovascular and different types of cancer (Harish
to acclimate cold and also they cannot withstand the chilling et al. 2012). Besides its role in human diet, tomato plants
stress when exposed to low temperature (Chinnusamy are being extensively used in research, mostly due to its
et al. 2007). simple diploid genetics, short life cycle and relatively simple
Overwintering plants have natural ability to resist ice genome (~900 Mb) (Zhou et al. 2013; Kumar et al. 2014).
crystal formation in the cell by inhibiting its growth (Pudney Nevertheless, tomato is a thermophilic crop that makes
et al. 2003). Proteins isolated from many grass species it more sensitive to chilling conditions (Zhou et al. 2013).
have shown to possess antifreeze properties that help Any modifications in terms of enhancing the chilling-
them to cope up with the cold conditions (Antikainen and tolerant ability of tomato plants will represent important
Griffith 1997). Antifreeze proteins (AFP) are a class of biotechnological breakthrough in high-altitude farming.
proteins found in a range of over-wintering plants that Transgenic technologies are presenting promising results in
protect them from the damage imposed by chilling stress improving plant traits, such as enhanced chilling tolerance,
(Kumar et al. 2014). Lolium perenne belongs to the by introducing single or multiple genes involved in response
Poaceae family, which are adapted to grow in the colder to chilling stress. A number of reports showed that the
Northern hemisphere (Sandve et al. 2011) and reported to transgenic plants expressing AFP from various sources
withstand freezing (Kuiper et al. 2001). Superior antifreeze proved enhanced chilling tolerance (Holmberg et al. 2001;
protein responsible for this activity was identified from Zhu et al. 2010; Lin et al. 2011; Denga et al. 2014; Sun et al.
L. perenne, which possessed two putative opposite-facing 2014). As an attempt to develop chilling-tolerant tomato
sites with surface complimentary to the prism face of ice plants that could aid in high altitude farming, here we are
(Kuiper et al. 2001). The LpAFP gene consists of 354 bp reporting for first time the development of transgenic tomato
that encodes a protein of about 118 amino acids (13.5 kDa) plants by expressing the AFP isolated from L. perenne and
with a semi-conserved seven-amino acid repeat X-X-N-X-V- successfully demonstrated the chilling-tolerant capability of
X-G on its entire length (Sidebottom et al. 2000; Middleton these transgenic lines.
et al. 2009). AFP reduces the freezing point of the solute
non-colligative, the process termed as thermal hysteresis 2. Materials and methods
(TH), by inhibiting the recrystallization of the growing ice
crystals (Kuiper et al. 2001). Besides that the AFP was 2.1. Gene isolation, cloning and plant expression
also described as protector of cells from damage during using gateway technology
non-freezing conditions (Tomczak et al. 2002) mainly due
to their interactions with: i) the integral membrane proteins Young leaves from cold acclimated L. perenne plants were
(Rubinsky et al. 1991); ii) the membrane lipids (Hays et al. used for total RNA isolation using Qiagen RNeasy RNA
1996); and iii) the membrane, which modifies the acyl chain’s Isolation Kit (Qiagen, USA). And 1 µg of total RNA was used
order in the bilayer core (Tomczak et al. 2002). for cDNA synthesis using the random hexamer primer and
Tomato (Solanum lycopersicum) is one of the most M-MuLV reverse transcriptase (Fermentas, USA) following
consumed vegetables worldwide with the production of manufacturer’s instructions.
1.70 million tons (http://www.fao.org/statistics/en/) in 2014 The LpAFP gene (GenBank accession number:
and is also one of the most preferred garden crops (Fan AJ277399) was amplified of each gene-specific primer
et al. 2015). In recent years, the consumption rate of (LpAFP-f101 and LpAFP-r102, both flanked by the attB
tomatoes has substantially increased worldwide and during sequences by Phusion DNA polymerase (New England
last two decades, the production and harvesting of tomato Biolabs, USA) using a My-cycler Thermal Cycler (Bio-Rad,
has doubled (Bergougnoux 2014). Across the globe, Asia USA). The amplicon generated was purified using PCR
dominates the tomato market where India ranked the Purification Kit (Qiagen, USA) and cloned into the entry
second after China in tomato production. Tomato is one vector pDONR/Zeo using the BP clonase II (Invitrogen,
of the preferred vegetables in routine human diet, which USA) following the procedure described by manufacturer’s
achieved a great familiarity over the last century (Harish protocol. Reaction product was then transformed into
and Sathishkumar 2011; Badimon et al. 2017). Apart from Escherichia coli competent cells. The sequencing-confirmed
the dietary source, tomatoes are also considered as an plasmid was recombined with the destination vector pEARLY
1130 Srinivasan Balamurugan et al. Journal of Integrative Agriculture 2018, 17(5): 1128–1136
Gate 102 (Earley et al. 2006) by LR Clonase II Reaction characterized by MS solid media with 2.0 mg L-1 zeatin
(Invitrogen, USA) according to manufacturer’s instructions, and 0.1 mg L-1 indole-3-acetic acid (IAA) (~30 explants per
thus enabling the transgene to be driven by the CaMV35S plate in a total of 20 plates). The precultured cotyledons
promoter (Fig. 1-A). Recombinant plasmid pEARLEY- were used as explants for Agrobacterium-mediated
LpAFP was electroporated into Agrobacterium tumefaciens genetic transformation. Agrobacterium culture (OD600=0.6)
strain LBA 4404 (Hoekema et al. 1983) and used for stable harboring pEARLY102-LpAFP was harvested at 5 000 r
plant transformation. min-1 for 10 min. The cells were resuspended in liquid MS
solution and the cell density was adjusted to yield a final
2.2. In vitro propagation and genetic transformation OD600 of 0.6 and 100 µmol L-1 acetosyringone was added.
of tomato plants The explants were blot-dried, inoculated in co-cultivation
media and incubated for 3 days. After the co-cultivation
Seeds of S. lycopersicum cv. Pusa Ruby (procured from period, the cotyledons were blot-dried on sterile filter paper
National Seed Corporation, New Delhi, India) were used. for 15 min and inoculated in selection media (MS with 2.0 mg
These seeds were washed 3–5 times with sterile distilled L-1 zeatin+0.1 mg L-1 IAA+20 mg L-1 glufosinate+300 mg L-1
water and then surface-disinfected by immersion in 4% carbenicillin). After 2–3 rounds of selection in the selection
sodium hypochlorite solution for 10 min with continuous media, the regenerated putative transformants with 5–6 cm
shaking. Subsequently, the seeds were rinsed with sterile length were excised and inoculated in rooting medium (1/2
distilled water to remove the traces of excess sodium MS media supplemented with 300 mg L-1 carbenicillin).
hypochlorite and blot dried before inoculation. Surface-
disinfected seeds were then inoculated in Petri dishes 2.3. T1 seed collection and germination
(9.0 cm×1.5 cm) (GenAxy, India) with half-strength
Murashige and Skoog (MS) medium (Duchefa, the The transgenic tomato plants (T0) were hardened in the
Netherlands) (Murashige and Skoog 1962). Three days mixture (coir pith:vermiculite:red soil in 1:1:1 (v/v) ratio).
before transformation, cotyledons of previously inoculated The surviving transgenic lines were confirmed by genomic
seeds were excised and inoculated in the preculture media PCR. The PCR confirmed transgenic plants were harvested
A Kpnl Msel
B
1 2 3 4 M
LpAFP
C
1 2 3
26S rRNA
LpAFP
Fig. 1 Molecular evaluation of transgenic lines. A, schematic vector map of pEarly102-LpAFP showing restriction enzymes used
for Southern blot. B, Southern blot analysis. Lane 1, negative control (wild type); lanes 2 and 3, transgenic tomato lines showing
the integration of AFP in transgenic lines Tm31 and Tm35, respectively; lane 4, positive control (pEarly102-LpAFP vector digested
with KpnI and MseI); lane M, marker. C, RT-PCR analysis showing mRNA expression pattern of AFP in transgenic tomato lines.
Lanes 1 and 2, transgenic tomato lines; lane 3, wild type. 26S rRNA was used as an internal reference gene. LB, left border; BAR,
basta (herbicide) resistance gene for selection of transgenics; 35S, the Cauliflower mosaic virus 35S promoter; HA, haemagglutinin;
OCS, 3´ sequences of the octopine synthase gene, including polyadenylation and termination sequences; RB, right border.
Srinivasan Balamurugan et al. Journal of Integrative Agriculture 2018, 17(5): 1128–1136 1131
individually. The transgenic lines were grown to maturity; et al. (2007) with slight modifications. Briefly, after chilling
flowers were self-pollinated and covered with a polythene stress, the leaf samples (~100 mg) were ground in liquid
bag to avoid cross contamination. Seeds were collected nitrogen and added with 10 mL of 75% ethanol and
and harvested in order to further generate the in vitro T1 incubated overnight in room temperature (RT) at 150 r min-1.
transgenic lines. Seeds of T1 tomato lines (Tm5, Tm12, Thereafter, the samples were centrifuged at 12 000 r min-1
Tm17, Tm24, Tm27, Tm31 and Tm35) were randomly for 5 min and 1 mL of freshly prepared anthrone reagent
selected and cultivated after surface-disinfection in vitro in (0.2%) was added to the supernatant, incubated in boiling
1/2 MS media+20 mg L-1 glufosinate. Then 4–5 weeks-old water bath for 15 min and cooled to room temperature. The
plantlets were selected by genomic PCR as mentioned absorbance was measured at 625 nm.
earlier and subjected to chilling treatment and further RWC RWC (%) was measured in the T1 transgenic and
molecular analysis. WT leaves as per the protocol described by Balestrasse
et al. (2010).
2.4. Molecular characterization of transgenic plants RWC (%)=(Fresh weight-Dry weight)/Dry weight×100
ELI Electrolytic leakage or ionic leakage index was
Gene expression analysis of AFP by RT-PCR The calculated from both the WT and transgenic lines as
cDNA was synthesized from the total RNA as described described by Wu et al. (2012). Leaf discs of all the samples
earlier in Section 2.1. The synthesized cDNA was used as (transgenic and WT plants) were collected and equilibrated
template for the RT-PCR using AFP gene specific primers in sterile deionized water for 4 h and initial conductivity
(LpAFP-f201 and LpAFP-r202). The native 26S rRNA
was measured. The samples were then boiled and the
gene was used as reference gene with a forward (Ref-f)
final conductivity was measured using the formula. ELI
and reverse primer (Ref-r). All the oligonucleotide primers
(%)=Initial conductivity/Final conductivity×100
employed in this study are provided in Appendix A.
Southern blot analysis of transgenic tomato lines Genomic
2.6. Data analysis
DNA from the selected transgenic T1 tomato lines were
isolated using DNeasy Maxi Kit (Qiagen, USA). The
Data were represented as means±standard deviation of
genomic DNA (about 30 µg) from transgenic lines, wild
mean (SDM). All the experiments were repeated three
type (WT) lines (negative control) and pEARLY-LpAFP
times. Data were statistically analyzed. The data obtained
plasmid (1 µg positive control) were digested with restriction
were subjected to one-way analysis of variance (ANOVA)
enzymes (KpnI and MseI) to release the LpAFP and the
followed by Duncan’s multiple range test (DMRT) using
digested product was electrophoresed at 25 V for 18 h on
SPSS ver. 13.0 (SPSS Inc., USA).
a 0.8% agarose gel and then transferred to nitrocellulose
membrane (BioTrace NT, Pall, USA) by capillary blotting
(Sambrook et al. 1989). Hybridization, biotin labeling of 3. Results and discussion
probe, membrane washing and detection were carried out
as per manufacturer’s instructions (Thermo, USA). 3.1. Genetic transformation of tomato using LpAFP
2.5. Physiological characterization of transgenic A. tumefaciens LBA 4404 strain harboring the vector
plants pEARLY102-LpAFP under the control of CaMV35S promoter
was used for genetic transformation. After co-cultivation
Physiological indexes such as electrolyte leakage index period of 3 days, the cotyledons were placed on the selection
(ELI), relative water content (RWC) and estimation of total media (MS+zeatin (2 mg L–1)+ IAA (0.1 mg L–1)+glufosinate
sugar content was performed for the T1 transgenic lines (20 mg L–1)+crbenicillin (300 mg L–1)) to regenerate the
under chilling and normal conditions to study the chilling transformants. Multiple shoots were induced in selection
tolerance capability. media within 3 weeks. Individual shoots were separated
Chilling treatment The T1 transgenic lines (5 weeks old) and inoculated in rooting media. Rooting was observed
were subjected to chilling treatment at 4°C in the growth after 1 week and the plants with well-developed roots were
chamber and the leaves were harvested every 24 h up to hardened after 3 weeks. The fruits were collected and seeds
5 days. The control samples were taken from the plants were harvested to generate T1 transgenic lines (Appendix
grown in the green house at normal conditions. The B). Several independent transgenic lines were analyzed in
collected samples were used for further analysis. terms of molecular and biochemical analyses (Appendices
Total soluble sugars Total soluble sugar content was C, D and E). For clarity of presentation, results from two
measured according to the protocol described by Parida representative transgenic tomato lines are given.
1132 Srinivasan Balamurugan et al. Journal of Integrative Agriculture 2018, 17(5): 1128–1136
3.2. Molecular analysis revealed the successful in- end of the 5th day, the transgenic lines did not show any
tegration, expression and inheritance of transgene phenotypic variations and found to be healthy (Fig. 2).
in the host genome Total soluble sugar Chilling stress in plants induces
osmotic and oxidative stress that eventually leads to the
Southern blot hybridization In order to reinforce the accumulation of compatible solutes and elevates the anti-
integration of the transgene in the host genome, Southern oxidative mechanisms in order to protect the plants from
blot analysis was carried out in the transgenic lines that are the stress-induced damage. The RWC, ELI and total sugar
preliminary confirmed with genomic PCR (data not shown). content were recognized as the important indicators of
The results showed the stable integration of LpAFP gene membrane integrity and chilling-tolerant ability of the plants
in all the tomato lines. The hybridization signal observed (Wu et al. 2012). In this study, transgenic tomato lines were
in the transgenic lines corresponds to the size of LpAFP subjected to chilling treatment at 4°C and total sugar content
gene, whereas no signal was observed in WT (Fig. 1-B). was measured in both transgenic and WT plants. The total
The above data demonstrated that the transgene LpAFP soluble sugar was increased during the chilling treatment in
was stably integrated in the transgenic tomato. both WT and transgenic lines. Sugar content was increased
RT-PCR The stable expression of LpAFP in the T1 lines up to 3.3-fold after 1 day of chilling treatment. After the 2nd
was analyzed by RT-PCR. The expected band size of day, sugar content increased gradually till the 5th day of
354 bp confirmed the transcription of LpAFP gene in the treatment (Fig. 3). Significant modifications in the total sugar
transgenic plants, whereas no such amplicon was detected content were reported in many of the plants exposed to low
in WT. The result showed that the levels of transcription of temperatures, which was correlated to the increased soluble
LpAFP gene in the transgenic lines were same. This might sugar level (Wang et al. 2013). Congruently, generation of
be due to the presence of constitutive promoter CaMV35S; transgenic tomato by overexpressing AtGRXS17 resulted in
hence the expression pattern was found to be same in all increased total soluble sugar content during chilling stress
the lines. The 26S rRNA gene (500 bp) was used as an (Xin and Browse 2000).
internal standard (Fig. 1-C). Sugars are known to act as cryoprotectants and
osmolytes that protect the cell by stabilizing the membrane,
3.3. Analyses of physiological indices revealed that thus prevent the cellular dehydration during chilling
LpAFP conferred chilling-tolerance in transgenics conditions (Sasaki et al. 1996). Among the various
physiological responses during freezing tolerance, sugar
Chilling-tolerant ability of transgenic lines was evaluated by content in plants is one of the major factors that determine
phenotypic analysis under 4°C. The results of the chilling the extent of freezing tolerance. Earlier studies showed that
treatments confirmed that transgenic lines carrying LpAFP the exposure of plants to low temperatures led to fructan
exhibited greater chilling tolerance. The phenotype analysis synthesis (Antikainen and Pihakaski 1994), then led to
showed that the WT plants could not survive at 4°C. At the the accumulation of sucrose, fructose or glucose inside
A B C D
E F G H I
Fig. 2 Phenotypic analysis of 5-week-old tomato lines after 5 days under chilling-treatment. A-G, transgenic lines; i.e., Tm5,
Tm12, Tm17, Tm24, Tm27, Tm31, and Tm35, respectively. H and I, wild type (WT) lines.
Srinivasan Balamurugan et al. Journal of Integrative Agriculture 2018, 17(5): 1128–1136 1133
***
500 ** ***
** ***
*
80 **
400 ***
***
*
60
RWC (%)
300 *
200 40
100
20
0
0 1 2 3 4 5 0
Days after treatment (d) 0 1 2 3 4 5
Days after treatment (d)
Fig. 3 Measurement of total sugar content in transgenic
plants under chilling treatment. Each bar value represents
Fig. 4 Measurement of relative water content (RWC) in
mean±SD, n=3. Significant difference between wild type
transgenic plants under chilling treatment. Each bar value
(WT) and transgenic lines (Tm31 and Tm35) are indicated by
represents mean±SD, n=3. Significant difference between wild
*
, P<0.05 level.
type (WT) and transgenic lines (Tm31 and Tm35) are indicated
by **, P<0.01 and ***, P<0.001 levels, respectively.
***
80 ***
crops in long term.
*** ***
Acknowledgements
***
60 ***
***
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