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General Aspects of Protein Structure
General Aspects of Protein Structure
Protein Structure :
Primary Structure (linear Sequence of aa)
Secondary Structure ( Helix, Sheet):
twisting of polypeptide backbone into
regular structure that are stabilized
by hidrogen bonding.
Protein structure
• Tertiary Structure (Heat shock protein)
– Formed by combinations of secondary structural
elements into a three dimensional organization
that is mainly stabilized by non covalent
interactions ,such as hydrogen bonds.
• Quaternary Structure (Hemoglobin, Ig)
– Proteins that have multiple polypeptide chains
(subunits)
• Three dimensional configuration of protein :
– Linear sequence of amino acid in a polypeptide
chain
– Gene → transcribed and translated → protein
Post-translational modifications
Protein degradation
Ubiquitin-proteasomal pathway.
• Figure 2-31 Molecular Biology of the Cell (© Garland Science 2008)
20 asam amino merupakan molekul yang
membentuk protein.
H
+H N C C OOH
3
R
Asam amino (essential-non essential,
dgn rantai samping asam – basa, polar- non
polar, dll)
Asam amino essential :
His, Ile, Leu, Lys, Met, Phe, Trip, Thr, Val.
Asam amino non-essential :
Ala, Cys, Pro, Glu, Gln, Asp, Tyr, Asn,
Gly, Ser, Arg, Hyp, Hyl.
Ikatan Peptida Polypeptida
Unik : bentuk tiga – dimensi (tertier atau
kwaterner)
Spesifik : fungsi biologis
Lipoprotein adalah kompleks lipid dengan
protein.
Glikoprotein adalah kompleks karbohidrat yang
terikat secara kovalent dengan protein.
PROTEIN Fungsional
• Enzyme
• Receptor
• Hormone
• Growth Factor
• Immunoglobuline
• Interferone
• Interleukine
• Adhesions molecules
• Transport Protein
Induce-Fit Mechanism