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3 4 Carbonic Acids and Heterofunctional Compounds
3 4 Carbonic Acids and Heterofunctional Compounds
METHODICAL POINTING
from the course
“Biological and bioorganic chemistry”
(part 1. Carboxylic acids and heterofunctional compounds
(hydroxy-, oxy-, phenoloacids)
Readers:
Kyiv-2018
2
1.1. CARBOXYLIC ACIDS ……………………………………………………. 3
1.1.1. General information ……………………………………………. 3
1.1.2. Nomenclature of carboxylic acids: systematic
(substitute) and trivial (common) names …………………………. 4
1.1.3. Classification of carboxylic acids …………………………. 5
1.1.4. Properties of carboxylic acids……………………………….. 8
1.1.5. The common chemical properties of carboxylic acids.
Carboxylic acid derivatives………………………….……………………… 9
1.1.6. Chemical properties of unsaturated acids ……………… 13
1.1.7. The most important representatives of saturated
carboxylic acids ………………………….…………………………………….. 13
1.1.8. The most important representatives of unsaturated
carboxylic acids: characteristics and properties of unsaturated
fatty acids ………………………….………………………….………………… 15
1.1.9. Aromatic carboxylic acids…………………………………….. 16
1.1.10. Polycarboxylic acids…………………………………………… 17
1.2. HETEROFUNCTIONAL COMPOUNDS ………………………………. 18
1.2.1. General information ………………………………………….. 18
1.2.2. The chemical properties of heterofunctional
compounds ………………………….………………………….……………… 19
1.2.3. Hydroxyacids ………………………….…………………………. 19
1.2.4. Phenolacids as an example of aromatic hydroxyacids . 26
1.2.5. Oxoacids ………………………….……………………………….. 30
1.2.6. Heterofunctional compounds of benzene series ………. 32
1.3. TEST QUESTIONS ………………………….……………………………. 37
3
Carboxylic acids and their derivates are widespread in nature and are
important for studying of biochemistry, pharmacology and other medical
disciplines. They get into organism with food and further are converted into
other substances.
- the fatty acids are components of lipids
- lactic acid (found in sour-milk products) and citric
acid (found in citrus fruits), and many keto acids are important metabolic
products that exist in most living cells.
- proteins are made up of amino acids, which also contain
carboxyl groups.
Some carboxylic acids and their salts are medical products:
- isovaleric acid is a part of validol,
- sodium benzoate is disinfectant,
- aspirin, the ester of salicylic acid, is prepared from acetic
acid.
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1.1.2. Nomenclature of carboxylic acids:
systematic (substitute) and trivial (common)
names
Systematic names of carboxylic acids are derived from the name of the
longest carbon chain that contains the carboxyl group via dropping the final -
e from the name of the parent alkane and adding the suffix -oic followed
by the word “acid” (Fig. 1.1). The chain is numbered beginning with the
carbon of the carboxyl group.
For example, the compound CH3CH2COOH has three carbon atoms and is
called propanoic acid, from propane, the name for a three-carbon chain, with
-oic acid.
If the carboxylic acid contains a carbon-carbon double bond, the
ending is changed from -anoic acid to -enoic acid to indicate the presence of
the double bond, and a number is used to show the location of the double
bond.
Most simple carboxylic acids were originally isolated from biological
sources; because their structural formulas were often unknown at the time of
isolation they were given names – trivial, or common names – that were
generally derived from the names of the sources (Fig. 1.2).
For example, CH3CH2CH2COOH, butyric acid, first obtained from butter.
Fig 1.2. The trivial (common; blue color) and systematic names of some
carboxylic acids
5
CH 3
CH2=CH-CH2-COOH vinyl acetic acid 3-butenoic acid
H crotonic acid trans-2-butenoic acid
COOH
C C
CH3 H
CH3 COOH
CH (CH2)7 COOH
CH3 (CH2)4 CH Linoleic acid cus-9-cus-12-octadecadienoic
acid
CH CH2 CH
CH (CH2)7 COOH
CH CH2 CH
CH (CH2)7 COOH
8
Table 1.3. The names of some dicarboxylic acids
COOH
COOH iso phthalic acid 1,3-benzoldicarbonic acid
COOH
Boiling point. Carboxylic acids have much higher boiling points than
hydrocarbons, alcohols, ethers, aldehydes or ketones with similar molecular
weight. So, formic acid boils at 101 °C whereas ethanol (ethyl alcohol), C2H5OH
– at 78.5 °C, although the two have nearly identical molecular weights.
This difference is due to two molecules of a carboxylic acid form two
hydrogen bonds with each other (two alcohol molecules can form only
one). Thus, carboxylic acids exist as dimers (pairs of molecules):
So, if the dimer is broken upon boiling, more energy is required to break
these two hydrogen bonds.
The scheme of some benzoic acid derivatives formation is given on Fig. 1.3.
NaOH
C6H5COONa + H2O
C2H5OH; H+ O
C6H5 C + H2O
OC2H5
ethylbenzoath
PCl5 O
C6H5 C + HCl + POCl3
Cl
C6H5COOH benzoilchloride
benzoic acid
O
C6H5 C
(CH3CO)2O; H+ O + 2 CH3 COOH
C6H5 C
O
anhydride of benzoic acid
Fig. 1.3. The scheme of some benzoic acid derivatives (salts, esters, halides, anhydrides)
formation
H2C OH O
C
O
sukcynimide
succinic acid
Fig. 1.5. The scheme of steroid hormones formation from acetic acid salts
The fatty acids (acids of fats) from 4 to 10 carbon atoms are mostly found
in milk fats. So, butanoic (butyric) acid, CH3CH2CH2COOH, is an important
component of cow’s milk, and goat’s milk is rich in fats containing the 6-, 8-,
and 10-carbon acids - hexanoic (caproic), octanoic (caprylic), and decanoic
(capric) acids, respectively. The higher saturated fatty acids, from C12 to C18
(lauric, myristic, palmitic, and stearic), are present in the fats and oils of many
animals and plants. Saturated fatty acids higher than C18 are much less
common in fats but do occur in some waxes.
Waxes obtained from animal and plant sources typically consist of esters
derived from long-chain acids and long-chain alcohols (Fig. 1.6).
For example, beeswax contains, among many other components, the ester
made from cerotic acid (C26) and triacontanol (the unbranched-chain
alcohol containing 30 carbons). Triacontanyl palmitate is another component
of beeswax:
CH3(CH2)29O-CO-(CH2)14CH3
15
1.1.8. The most important representatives of
unsaturated carboxylic acids: characteristics and
properties of unsaturated fatty acids
Unsaturated fatty acids have some peculiarities. If they have two or more
carbon-carbon double bonds, each double bond is separated from the next
by a −CH2− group (methylene group) – so they are called the isolated double
bonds. In addition, double bonds have cis configuration.
Essential fatty acids – linoleic and linolenic acids – are necessary for
the human body, but the body can’t synthesize them, and they must be
obtained in the diet.
Unsaturated fatty acids with above 12 carbon atoms (long-chain fatty
acids) are liquids at room temperature, in contrast to the saturated fatty acids,
which are solids.
The fats are esters of these long-chain fatty acids and the alcohol glycerol.
Solid fats, obtained mostly from animal sources, have a high percentage of
saturated fatty acids. Liquid fats (called oils), obtained mainly in plant, have a
high percentage of unsaturated fatty acids.
One of the unsaturated fatty acids - arachidonic acid - is used by the
human body to syntheze of two kinds of essential substances,
the prostaglandins (for example, PGE1) and the leukotrienes (for example,
LTB4) (Fig. 1.7). Prostaglandins and leukotrienes (which together with
tromboxanes are called eicosanoids) are made in small amounts and act
as hormone mediators. Some prostaglandins raise blood pressure, whereas
others lower it. The PGE1 analog, misoprostol, is currently used to prevent
ulceration associated with the use of nonsteroidal anti-inflammatory drugs
(NSAIDs).
•
Fig. 1.7. The structures of some prostaglandins, leukotrienes and PGE1 analog
misoprostol
16
1.1.9. Aromatic carboxylic acids
Benzoic acid occurs in various plants, both in free acid form and in ester
form. It also presents in the urine of certain animals, especially horses, as
an amide of glycine called hippuric acid, C6H5CONHCH2COOH. It is a solid
at room temperature (melting point 122 °C); its sodium salt, sodium benzoate,
is used as a preservative in many foods.
Some other important aromatic acids are given on Fig. 1.8.
1.2.1.General information
Monofunctional compounds
H2 C OH
CH OH
(tree −OH groups)
H2 C OH
Polyfunctional compounds
Sphingosine
(two −OH groups; one −NH2-group)
Heterofunctional compounds
Fig. 1.10. The examples of mono-, poly- and heterofunctional organic compounds
19
The functional groups which the most often occur in the heterofunctional
compounds are given on Fig. 1.11.
- hydroxyl (−OH),
- amino (−NH2),
|
- oxo (C=O or −C=O)
| |
H
1.2.3. Hydroxyacids
3 2 1 O
H3 C CH C
β α
OH
OH
2-hydroxypropanoic acid
α-hydroxypropanoic acid
O O
H2C CH2 C + NaOH H2C CH2 C + H2O
OH ONa
OH OH
O O
H2C CH2 C + HO CH3 H2C CH2 C + H2O
OH O CH3
OH OH
Methyl-β-hydroxypropanoate
21
c) Amides (with ammonium, t°):
O t=200o O
H2C CH2 C + NH3 H2 C CH2 C + H2O
OH NH2
OH OH
O
O
H 2C CH2 C + HCl H2C CH2 C + H2O
OH OH
OH Cl
Glyoxalic acid
Piruvic acid
* *
Any molecule that has chiral center has optical activity. Enantiomers are
stereoisomers whose molecules are mirror images of each other. They also are
called mirror or optical isomers. In general, а compound that has n chiral
centers may exist in а maximum of 2n stereoisomeric forms. For example,
when three chiral centers are present, at most eight stereoisomers (23 = 8) are
possible (four pairs of enantiomers).
The lactic acid molecule has one chiral center, because of there are four
different groups connected with this carbon atom:
* *
- Site 1 (−CH3)
- Site 2 (−H)
- Site 3 (−COOH)
- Site 4 (−OH)
So the lactic acid molecule has two (21) stereoisomers, called enantiomers.
Enantiomers have the same:
- boiling point,
- melting point,
- density,
- formula,
- mass,
- connections.
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Enanthiomers are different by two characteristics:
- their configuration (they differ one from another, as an object
and its image in a mirror)
- Direction of rotation of plane polarized light (right or left)
Optical isomers can have D- or L-configurations. Identification of
configurations of optical isomers via D-, L-system is especially powerfull in the
chemistry of carbohydrates and amino acids.
Glyceraldehyde is used as the standard for identification of optical
isomers configuration. D–isomer was called a substance, which had −OH
group to the right from asymmetric carbon atom (Fig. 1.14).
The light from the tube with solution then pass through analyzer
(another pair of crossed Nichol prisms). The analyzer prisms are then rotated
so that the transmitted light is again vertically polarized. The angle
through which the analyzer has been turned is called the angle of
polarization.
Clockwise rotation of polarized light is designated as (+); anticlockwise
rotation as (-). So notation (+) means rotation to the right (clockwise), and (-)
means rotation to the left (anticlockwise). Not in all cases substances of D-
series rotate a surface of plane polarized light to the right, and substances
of L-series – to the left. Thus the D-enantiomer of glucose is (+)-glucose.
In general, letters D and L are used before the name of substance
designation of a configuration. Also before name of the substance must be
written signs (+) and (-) corresponding to the rotation to the right or to the
left.
An equimolar mixture of two enantiomers is called а racemic mixture, or
а racemate. Since а racemic mixture contains equal numbers of dextrorotating
and levorotating molecules, the net optical rotation is zero - such mixture is
optically inactive. А racemic mixture is often specified by prefixing the name
of the compound with the symbol (± );
Hydroxyacids are widespread in the nature; also they are formed in body.
Lactic acid (hydroxyacid with one OH-group and one COOH-group) firstly was
extracted from the milk.
O
H3C CH C
lactic acid
OH OH
O O
C CH CH2 C
HO OH
OH
malic acid
O
C
OH
CH OH
CH OH
O
C
OH Tartaric acid
3,4,5-trihydroxybenzoic
salicylic acid, acid,
2-hydroxybenzoic acid gallic acid
4-hydroxybenzoic acid
Fig. 1.16. The structures of phenolacids representatives
27
Chemical properties of phenolacids are due to the presence in their
structure:
• carboxyl group,
• phenolic hydroxyl
• the aromatic nucleus.
For example, salicylic acid is both a carboxylic acid and a phenol, so it
can be esterified in two ways:
• in methyl salicylate, the COOH group of salicylic acid
is esterified with methanol (CH3OH),
• in acetylsalicylic acid (aspirin) the phenolic −OH
group of salicylic acid is esterified with acetic acid
COOH COONa
+ NaHCO3 + CO2 + H2O
OH OH
salicylic acid
COOH COO
+ FeCl3 Fe + 3HCl
OH O ..
H 3
complex helatic salt of
salicylic acid
(violet colour)
b) With alcohols:
28
c) Decarboxylation:
COOH
t
+ CO2
OH OH
salicylic acid phenol
COOH COOH
HOH
O + CH3COOH
t
O C CH3 OH
acetylsalicylic acid salicylic acid
Br COOH Br Br
+ Br 2 + HBr + CO2
OH OH
Br Br
yellow precipitate
Salicylic acid is widely widespread in the nature and together with its
derivatives enters into the composition of many drugs. Derivatives of salicylic
acid have anesthetizing, febrifugal and anti-inflammatory effects. Anti-
29
inflammatory activity is caused by the presence of −OH group: all derivatives of
phenol which contain this group posse a bactericidal action.
From the chemical point of view derivatives of salicylic acid (salicylates) are
generally esters which are obtained using both functional groups. When heated,
salicylic acid with methanol at presence H2SO4 methylsalicylate is formed (Fig.
1.17).
O
OH OH
C OO N a P O C l 3, C 6H 5ON a C
N aH C O 3
O C 6H 5
-C O 2, -H 2O -N a C l, -Na P O 3
Sodium salicylate Phenylsalicylate, salol
O
OH
C CH 3 NH 2
C O OH O
(C H 3C O ) 2O
C OOH -C 6H 5OH
- C H 3C OOH
Salicylic acid
Acetylsalicylic acid, OH
aspirin
C H 3OH
-H 2O (H 2S O 4)
O O
OH OH OH
C OO C H 3 C C
NH 3 NH 2 NH
Methylsalicylate Salicylamide
Oxaphenamide
OH
Fig. 1.17. The scheme of the some salicylic acid derivatives formation
1.2.5. Oxoacids
γ-ketovaleric acid,
O
conc. H2SO4, t O
CH3 C COOH CH3 C + CO2
H
pyruvic acid acid
pyroracemic acetaldehyd
2. Decarboxylation of β-oxoacids:
O
t
CH3 C CH2 COOH CH3 C CH3
- CO2
O
acetoacetic acid
acetone
Hydroxilamine
Hydrazine
Pyruvic acid (in the form of its salt pyruvate) is involved in the normal
metabolism of carbohydrates as the final product of glycolysis – the process
that consist of 11 or 12 reactions starting from glucose. After forming it is
converted (by loss of carbon dioxide) to acetyl coenzyme A, which enters the
tricarboxylic acid cycle. Pyruvate is also used by the body to synthesize alanine,
an amino acid required for the synthesis of proteins.
The acetoacetic acid is unstable and loses carbon dioxide to give
acetone:
CH3COCH2COOH → CH3COCH3+ CO2
It occurs in the yeast, liver, eggs, milk, etc. This compound is the factor of
growth of microorganisms and takes part in many biochemical processes.
Deficiency of p-aminobenzoic acid in food leads to graying and loss of hair.
Derivatives of p-aminobenzoic acid (anesthesin, benzocaine, novocaine) are
local anesthetics (Fig. 1.19).
Anesthesin
Novocaine
hydrochloride
Benzocaine Novocaine
sulfanilic
Acetanilide acid
p-Acetamino-benzene- p-Acetamino-
sulfonyl chloride benzenesulfonamide
35
Streptocide has bactericidal action.
If amines are used instead of ammonia substituted, sulfanilamides (sulfa
drugs) can be obtained:
p-Acetamino-benzene-
sulfonyl chloride
Fig. 1.21. Structural similarity of PABA, Sulfa drugs and dihydrofolate - intermediate of
tetrahydrofolic acid biosynthesis
1. Choose from the names of the carboxylic acids the name that is
trivial:
A. propanoic acid
B. 4-aminobutanoic acid
C. 2-methylbutanoic acid
D. formic acid
E. ethanoic acid