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Original articles
Abstract
Revista Mexicana de Urología ISSN: 2007-4085, Vol. 81, núm. 3, mayo-junio 2021:pp. 1-12. 1
Chromosomal and SRY gene findings by FISH in patients with disorders of sexual... Herrera L. A., et al.
Resumen
Introduction
2 Revista Mexicana de Urología ISSN: 2007-4085, Vol. 81, núm. 3, mayo-junio 2021:pp. 1-12.
Chromosomal and SRY gene findings by FISH in patients with disorders of sexual... Herrera L. A., et al.
Human sex determination involves the involved in the etiology of the disorder and
differentiation of the originally dimorphic em- aiding in the decision-making, with respect to
bryo into an individual with distinct male or fe- the monitoring of the patient.
male reproductive roles. That process can be in-
terrupted by genetic and/or non-genetic factors
capable of altering any of the molecular signals Methodology
that specify the specific sexual development of
the sexual organs or endocrine function. Twelve patients diagnosed with DSD from
Chromosomal alterations, particularly of the departments of urology or genetics were
the sex chromosomes, or alterations in genes evaluated during 2014. All patients included
involved in early sex determination, such as the in the study were diagnosed with DSD, with
SRY gene, are genetic mechanisms associated suspected alteration in the sex chromosomes
with the development of disorders of sexual and/or the SRY gene, as a possible cause of the
development (DSD).(9,10) The 2006 Chicago pathology. Patients with DSD whose phenoty-
Consensus on management of DSD introduced pe was caused by hormonal disorders or with
a new classification based on karyotype. That known syndromes, such as Turner syndrome
classification includes sex chromosomes DSD, or Klinefelter syndrome, were excluded. In
46,XY DSD, and 46,XX DSD. Therefore, chro- all cases, the patient and his/her parent or
mosomal analysis is important in identifying guardian received information about the study
the underlying cause of the disorder, and is and signed the consent form to carry out the
considered a priority in making the diagnosis, cytogenetic tests and access the patient’s medi-
as well as in directing patient management.(2) cal history. The protocol was approved by the
Due to the difficulties in the complete cyto- Ethics Committee of the School of Medicine
genetic diagnosis of many patients with DSD of the Pontificia Universidad Javeriana and the
and inconclusive results in their tests, the aim Hospital Universitario San Ignacio.
of our work was to determine the presence Blood samples were collected from all pa-
of chromosome and SRY gene alterations, in tients in a tube with heparin and a cell culture
patients clinically diagnosed with DSD, to su- was performed for high resolution karyotyping
pport the diagnosis. We analyzed 12 patients in RPMI 1640 (Sigma), supplemented with
with different clinical conditions of DSD, to 10% fetal bovine serum (FBS) (Eurobio) and
establish their chromosomal condition and the phytohemagglutinin (Gibco) as a mitogen.
presence or absence of the SRY gene, as a cause Cellular synchronization was performed with
of the disorder. Of that group of individuals, 8 a final concentration of methotrexate [10-7M]
(66%) were classified as DSD 46,XY, 2 (17%) as (Sigma) and unblocking was carried out with
DSD 46,XX, and 2 (17%) as DSD due to mosaic a final concentration of thymidine [1x10-5M]
chromosomal abnormalities. Our results de- or BrdU [30µg/ml] (Sigma), to obtain meta-
monstrate the importance of performing cyto- phase chromosomes. High-resolution G (BG)
genetic tests as the initial diagnostic approach (HCl-Wright) or R (BR) (Hoechst-Giemsa)
for this type of clinical condition, enabling a banding was obtained through staining, accor-
first approximation of the genetic panorama ding to a standardized laboratory protocol.(11)
Revista Mexicana de Urología ISSN: 2007-4085, Vol. 81, núm. 3, mayo-junio 2021:pp. 1-8. 3
Chromosomal and SRY gene findings by FISH in patients with disorders of sexual... Herrera L. A., et al.
Karyotype analysis was performed in gonadal reported using the International System for
or fibroblast tissue in three cases, in which a Human Cytogenetic Nomenclature.(12) In all
biopsy was performed for pathologic studies, cases, a geneticist and/or the multidisciplinary
and a small section of that biopsy tissue was DSD group of the Hospital Universitario de San
used for cell culture and karyotype analysis. Ignacio clinically assessed the participant to
The tissue was cut into small fragments that obtain the clinical data.
were placed in a culture flask with RPMI and
20% SFB for fibroblast-like cell growth, mono-
layer confluence, and finally in-situ cell growth Results
on a plate, to obtain metaphase chromosomes.
In each case, 50 metaphases from lymphocytes Table 1 shows the data on age, assigned sex,
with 550 to 700 band resolution were evaluated, and clinical characteristics of the group of pa-
whereas in solid tissues, the resolution level tients analyzed. The average age was 7 years,
was 300 to 450 bands; in cases with mosaicism ranging from 2 months to 44 years. In 9 (73%)
and sufficient material for evaluation, reading cases, the sex assigned at birth was male, and
was extended to 100 metaphases. Fluorescence in 3 (27%) cases it was female. The most fre-
in situ hybridization (FISH) was performed quent clinical finding was abnormal genital
with a specific probe for the SRY gene (SRY differentiation in 8 cases (67%). Other relevant
Probe, Cytocell Aquarius) and a centromere findings in our series were 9 (75%) cases of mi-
(DYZ3 a-satellite Probe, Cytocell Aquarius) for cropenis and 5 (41.6%) cases of hypospadias,
the Y chromosome, through standard protocol as shown in Table 1.
indicated by the supplier. The results were
Table 1. Clinical characteristics of the cases assessed and results of the karyotype and FISH
analyses
Case Assigned
Age Clinical Characteristics Karyotyping and FISH Results
No. Sex
In blood
46,XX.ish Yp11.31(SRY-)
Ambiguous genitalia, Ovotestis. 3 cm
2
1* M long genital tubercle. Urogenital sinus at
Years
the base of the tubercle. In gonads
mos 92,XXXX[12]/46,XX[38].ish
Yp11.31(SRY-)
Continúa...
4 Revista Mexicana de Urología ISSN: 2007-4085, Vol. 81, núm. 3, mayo-junio 2021:pp. 1-12.
Chromosomal and SRY gene findings by FISH in patients with disorders of sexual... Herrera L. A., et al.
Case Assigned
Age Clinical Characteristics Karyotyping and FISH Results
No. Sex
In blood
Continúa...
Revista Mexicana de Urología ISSN: 2007-4085, Vol. 81, núm. 3, mayo-junio 2021:pp. 1-8. 5
Chromosomal and SRY gene findings by FISH in patients with disorders of sexual... Herrera L. A., et al.
Case Assigned
Age Clinical Characteristics Karyotyping and FISH Results
No Sex
In 9 cases (75%), with information on the Table 1 shows the results of the cytogene-
status of the internal sexual organs, 5 (45%) tic analyses. In the blood cell analysis of the
of them had undefined or unidentifiable go- 12 individuals, 8 (66%) had 46,XY karyotype,
nads, 3 (18%) had ovotesticular tissue, and 1 2 (17%) 46,XX karyotype, and 2 (17%) mo-
(9%) had normal gonads. The main reasons for saic karyotype (Table 1). In 2 (33.3%) cases
consultation were unilateral or bilateral cryp- (1 and 8) there was no coincidence in the
torchidism, in 5 cases (41.6%); hypospadias, 5 result of the karyotype and FISH analyses
cases (41.6%); and primary amenorrhea, 1 case with the assigned sex: one with karyotype
(8.3%). Among the associated characteristics, 46,XX and absence of SRY (SRY-), and the
alterations, such as aphallia, bifid/hypoplastic other with karyotype 46,XY and presence of
scrotum, clitoromegaly, and psychomotor de- SRY (SRY+); and they were assigned a male
velopment disorders, were reported. and female phenotype, respectively (Table
Among the important antecedents found in 1). Both cases with mosaic karyotype (cases 3
5 (33.4%) cases were: threatened abortion, use and 10) occurred due to alteration in the sex
of intravaginal ovules during pregnancy, use of chromosomes. Both cases presented a cell line
hormonal therapy (levonorgestrel, estrogens) with the absence of a sex chromosome (45,X),
during pregnancy without medical indication, and at least a second line with the presence of
and history of renal congenital anomaly in a Y chromosome (Figure 1).
second degree of consanguinity. In 7 (58%) Figure 1. Karyotype 47,XYY of the cell line
cases, the personal background could not be with two Y chromosomes in case 10. Y chro-
clearly established. mosomes (arrow) with normal appearance in
the R-banding karyotype analysis
6 Revista Mexicana de Urología ISSN: 2007-4085, Vol. 81, núm. 3, mayo-junio 2021:pp. 1-12.
Chromosomal and SRY gene findings by FISH in patients with disorders of sexual... Herrera L. A., et al.
Figure 1
In both cases, the FISH test detected a signal from the SRY gene at each end (SRY++) of the
Y chromosomes, and absence of the heterochromatin region in Yq12 (DYZ1-) (Figure 2A). The
probe for the centromeric region showed two centromeres on the Y chromosome, revealing iso-
dicentric chromosomes (DYZ3++) in both cases (Figure 2B and 2C). The sex assigned at birth
in those patients was male (case 3) and female (case 10) (Table 1). Gonad karyotype and FISH
analyses of cases 1 and 12 coincided with the chromosomal constitution of the blood karyotype.
However, in case 1, a second tetraploid cell line was observed in both gonads (Table 1). In case 3,
the karyotype analyses performed on the cells taken from the scrotal tissue biopsy confirmed the
presence of mosaicism, inversely proportional to that found in blood (Table 1).
Figure 2. Result of FISH analysis in blood for case 10, with female phenotype and abnormal
genital differentiation
Revista Mexicana de Urología ISSN: 2007-4085, Vol. 81, núm. 3, mayo-junio 2021:pp. 1-8. 7
Chromosomal and SRY gene findings by FISH in patients with disorders of sexual... Herrera L. A., et al.
A. FISH image in metaphase 47,XYY; the possible to establish the prevalence of each of
two isodicentric Y chromosomes can be seen, those conditions. However, 66% of our cases
with the presence of two SRY signals (red) were DSD-XY, which is consistent with the
in each and the absence of the Yq12 region percentages reported.
(green); the aquamarine signal corresponds DSD 46,XY individuals are characterized
to DXZ1 for the chromosome X centromere. by having a chromosomally masculine karyo-
47,XYY.ish idic(Y)(q11.2)(DYZ1-,SRY++)x2. type with no alterations, with phenotypes that
B. FISH image with DYZ3 centromeric probe can range from mild hypospadias to completely
in metaphase, where two Y chromosomes with female internal and external genitalia.(14) That
double centromere (green) 47,XYY can be phenotype has been associated with mutations,
seen, as well as two centromeric signals in the deletions, duplications, or alterations in the
nucleus on a single Y chromosome, cell line regulation of genes responsible for the deter-
46,XY. 47,XYY.ish idic(Y)(q11.2)(DYZ3++)x2 mination of sex development and hormonal
C. Ideogram of the isodicentric Y chromosome. function, such as SRY, NR0B1, SOX9, NR5A1,
Probes used SRY probe Cytocell Aquarious and DAX1, LHR, and AR/NR3C4, among many
DYZ3 alpha-satellite Probe, Cytocell Aquarius. others.(9,10,15) From a clinical perspective, the
8 DSD 46,XY cases described herein showed
conditions including hypospadias with diffe-
Discussion rent degrees of severity, sexual ambiguity, and
a case of completely female phenotype. The
DSD are a group of conditions that include SRY gene was physically present in all cases,
one or more of the following cases: congenital indicating no loss, and therefore may not be
development of abnormal genital differentia- involved in the presentation of DSD in those
tion, congenital discordance between internal patients. However, the presence of mutations
and external sexual anatomy, alterations of sex in the gene cannot be ruled out, so it cannot be
chromosomes, and disorders of gonadal deve- definitively eliminated as a cause of the disor-
lopment.(1,3,13) We analyzed herein 12 patients der, especially in the case with a female phe-
with different clinical conditions included in notype. The SRY gene encodes a transcription
DSD, to establish their chromosomal condi- factor (SRY protein), whose main function is to
tion and the presence or absence of the SRY induce the gene activation cascade that directs
gene, as a cause of the disorder. Of that group the development of the testis from an undiffe-
of individuals, 8 (66%) were classified as DSD rentiated bipotential gonad.(16,17) That gene is
46,XY, 2 (17%) as DSD 46,XX, and 2 (17%) as located in the short arm of the Y chromosome
DSD due to mosaic chromosomal abnormali- (Yp11.3), and the presence of protein-inactiva-
ties. The prevalence of those disorders is not ting mutations has been associated with gona-
well known but some studies report a higher dal dysgenesis 46,XY.(17)
frequency of DSD-XY individuals, followed The two 46,XX cases had abnormal genital
by DSD-XX individuals, and finally DSD due differentiation and ovotestis, absence of the
to chromosomal abnormalities.(2) Because the SRY gene, and male and female phenotype,
group of cases analyzed was so small, it was not respectively. Although individuals with male
8 Revista Mexicana de Urología ISSN: 2007-4085, Vol. 81, núm. 3, mayo-junio 2021:pp. 1-12.
Chromosomal and SRY gene findings by FISH in patients with disorders of sexual... Herrera L. A., et al.
sex reversal are generally uncommon in 46,XX suggested Turner syndrome phenotype in the
DSD, that phenotype has been linked to the patient and was not reported at the time of
presence of the SRY gene due to translocation this study. Phenotypes associated with Turner
to the X chromosome during meiosis. However, syndrome may be present in those patients, so
in our two cases, the gene was not detected by monitoring the clinical signs of said syndrome
FISH in blood or the gonadal cells. The presen- is recommended.(9) Furthermore, the risk of
ce of polyploid lines in gonadal tissue, as in case gonadal germ cell tumors (gonadoblastoma)
1, which could have a dose effect and influence due to the presence of the Y chromosome or
sex determination, has not been reported, so of Y-derived sequences should be monitored.
further studies are required to confirm their (20,21)
On the other hand, it has been suggested
effect. Alterations in the function of genes, that duplication of the SRY gene in cases with
such as NR5A1, SOX3, WNT4, and RSPO1, 45,X/46,X,idic(Yp) mosaicism does not deter-
have been related to ovotesticular DSD in the mine male or female sex differentiation, but
absence of SRY,(10) and should be investigated that it possibly depends on the proportion of
in such cases.(9) each cell line in gonadal tissue.(22) In our two
In DSD due to chromosomal abnormalities, cases, each one with a different assigned sex,
it is rare to find 45X/46,XY and 45,X/47,XYY the cell line distribution in the gonadal tissue
mosaicism, and it presents an approximate was impossible to confirm; in the first case, go-
incidence of 1.7/10,000 pregnancies.(18) It has nadal tissue was not available for analysis, and
been estimated that only 5%-10% of individuals the second case was lost to follow-up.
with those anomalies have abnormal genital di- Clinically, DSD are very complex and diffi-
fferentiation at birth, and the rest have a male cult to diagnose and treat.(6–8) In addition to that
phenotype.(19) Cases with mosaicism can vary complexity, the patient’s family environment
from male phenotypes with cryptorchidism is also strongly affected and has an effect on
or hypospadias to female phenotypes with adequate management. Therefore, for compre-
gonadal dysgenesis. The typical combination hensive management, a timely approach by a
in those patients is asymmetry in testis deve- multidisciplinary team with experience in DSD
lopment on one side, and gonadal striae with is recommended. Such a team should include
persistence of Müllerian derivatives on the neonatologists, endocrinologists, urologists/
opposite side.(18) The first of our two cases with surgeons, gynecologists, geneticists, obstetri-
mosaicism (case 3), assigned male phenotype cians, radiologists, pediatric nurse educators,
and karyotype mos 45,X/46,X,idic(Y)(q11.2), andrologists, psychologists, and psychiatrists,
concurred with those typical characteristics. among other specialists involved in the care of
In the second case, with assigned female infants, children, adolescents, and adults with
phenotype, and whose mosaicism included DSDs.(8,10) Our group of patients was treated by
the presence of a third cell line with two iso- a multidisciplinary team.
dicentric Y chromosomes, no information on The greatest difficulty was related to the
her gonadal status was obtained. In the latter healthcare system, specifically in directing
case, the presence of clitoromegaly, cardiac patients for comprehensive management,
abnormality, and assigned female phenotype and in some cases, it affected their treatment,
Revista Mexicana de Urología ISSN: 2007-4085, Vol. 81, núm. 3, mayo-junio 2021:pp. 1-8. 9
Chromosomal and SRY gene findings by FISH in patients with disorders of sexual... Herrera L. A., et al.
follow-up, and family counseling. Such in- the pathology. Importantly, in our cases with
conveniences are frequent in our healthcare mosaicism, the Y chromosomes had a relatively
system, especially in relation to highly complex normal appearance in the karyotype, and the
disorders, such as DSD.(8) In that context, and isodicentric structure was detected only after
according to our experience, as well as that of the FISH test was applied, reinforcing the impor-
various groups working with DSD around the tance of using different cytogenetic methodolo-
world, the presence of abnormal genital diffe- gies to determine the genetic etiology of DSD.
rentiation in a newborn must be treated as a Methods, such as MLPA and CGH-microarray,
medical emergency. A multidisciplinary clinical could be useful in the search for copy number
evaluation should be carried out, to establish a variations (CNVs) in the sex determination
diagnosis and adequate sex assignment to the genes, whereas the complete genome analysis
newborn.(8) Likewise, when DSD is detected could be useful in detecting mutations or new
before birth by conflicting prenatal karyotype genes involved in those processes.(9,15) Because
and ultrasound imaging results, the multidis- environment has been proposed to play a large
ciplinary team must intervene to confirm the role in the etiology of the disorder, epigenetic
diagnosis immediately at birth. DSD can also analysis of the genes regulated by that mecha-
appear during childhood, associated with other nism would greatly help to understand those
syndromic characteristics; during adolescen- clinical conditions.
ce due to virilization, absence of puberty, or
primary amenorrhea; and during adulthood,
associated with infertility, gonadal tumors, and Conclusion
other complications.(6,9,23) Regardless of the
specific needs of each of those groups, a timely Cytogenetic results allowed us to establish
multidisciplinary team intervention is always the cause of the phenotype in two cases, and
recommended. they suggested that other genes or regulatory
The results presented herein show us the mechanisms were involved in two other cases.
importance of cytogenetic analyses in the diag- The results show the importance of applying
nosis of DSD. They are essential for making de- different cytogenetic tests in the diagnosis of
cisions in the treatment and monitoring of the DSD, and the need for a multidisciplinary team
patient and for counseling the individual and/ to assess the patient and direct the treatment,
or family. It is clear that those results, together follow-up, and counseling. The present study
with the clinical analysis of the patients, con- paves the way for the corroboration with other
tribute to the diagnosis and/or classification of molecular studies of the SRY gene or other
the disorder. In addition, in cases such as those genes or mechanisms regulating sexual organ
with hypospadias and no cytogenetic alteration, development, because in all cases, there were
the results can be relevant for continuing to clinical alterations associated with DSD. Fur-
search for the etiology of the disorder. Likewise, thermore, the commitment of the healthcare
we consider that cytogenetic studies in gonadal authorities to their communities is extremely
tissue, in addition to the histopathologic study, important, to reduce the risk of disability in
can be of great help in discerning the origin of those affected.
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Chromosomal and SRY gene findings by FISH in patients with disorders of sexual... Herrera L. A., et al.
Revista Mexicana de Urología ISSN: 2007-4085, Vol. 81, núm. 3, mayo-junio 2021:pp. 1-8. 11
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