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J Jfluchem 2021 109799
J Jfluchem 2021 109799
J Jfluchem 2021 109799
Short Communication
A R T I C L E I N F O A B S T R A C T
Keywords: A two-step approach to the synthesis of ω-CF3O-substituted aliphatic sulfonyl chlorides is reported. The method is
Aliphatic compounds based on the reaction of alkylating agents bearing a ω-CF3O substituent with thiourea and subsequent oxidative
Building blocks chlorination of the obtained isothiuronium salt. In this way, β-(trifluoromethoxy)ethane and γ-(tri
Elimination
fluoromethoxy)propane sulfonyl chlorides were obtained and assessed as the reagents in the sulfonylation re
Oxidative chlorination
Sulfonyl chlorides
action with amines. The former one participated the reaction affording the corresponding vinylsulfonamides
Trifluoromethoxy group because of β-elimination of trifluoromethanol, while the latter one allowed for the preparation of desired
γ-(trifluoromethoxy)propane sulfonamides.
1. Introduction Previously, we [24] and others [25,26] have described the synthesis
of a series of simple aliphatic ω-CF3O-containing building blocks 7–18
Modern pharmaceutical industry has been in incessant need of novel (Figure 2), demonstrated their utility for the parallel synthesis, and
small drug-like molecules possessing improved physicochemical prop studied the physico-chemical properties (lipophilicity, kinetic solubility,
erties and biological activities [1–4]. Among the numerous structural and microsomal stability) of obtained derivatives. Taking into account
motifs that endow the molecules with unique characteristics, the the importance of sulfonamides in drug discovery [27–31], as well as in
fluorine-containing units are of special demand [5–7]. More than two line with our ongoing efforts towards synthesis of sulfonyl halide
hundred and sixty fluorine-containing drugs have been approved and building blocks [32–38], we have turned our attention to ω-CF3O
used over the world [8], and half of the blockbuster drugs contain substituted aliphatic sulfonyl chlorides. Surprisingly, this compound
fluorine atoms [9–13] (although there are some concerns on an enor class appeared to be hitherto unknown, and their reactions have not
mous increase of emission of fluorine-containing compounds into the been elucidated in the literature.
biosphere [14]). The present work is aimed at developing an efficient and robust
Unlike the compounds bearing fluorinated substituents attached to their method of obtaining ω-CF3O-substitiuted ethane- and propanesulfonyl
framework via the C–C linkage, the fluoroalkoxy derivatives possessing chlorides 19, 20 (Figure 2) as well as assessment of their synthetic utility
O–CXFY unit remained exotic for a long period of time. However, owing to in the sulfonamidation reactions.
beneficial features of the fluoroalkoxy functionality [15,16], it has attracted
significant interest in recent years and has been increasingly used in phar 2. Results and discussion
maceutical industry, agrochemistry, and materials science. At the same
time, the scope of the marketed CF3O-containing derivatives is limited to We initiated our study with the reaction of S-nucleophiles with the
aromatic derivatives and demonstrated by approved drugs Delamanid (1) commercially available alkylating agents bearing ω-CF3O substituent in
[17] and Pretomanid (2) [18,19] (for treatment of tuberculosis), Riluzole order to estimate the utilization of interim sulfides as the possible pre
(3) [20] (addressing anti-amyotrophic lateral sclerosis), as well as fungicide cursors and find the most convenient pathway to the target sulfonyl
Thrifluzamide (4) [21], insecticide Triflumuron (5) [22], and plant growth chlorides.
regulator Flurprimidol (6) [23] (Figure 1). Firstly, we attempted the preparation of the corresponding sodium
https://doi.org/10.1016/j.jfluchem.2021.109799
Received 8 April 2021; Received in revised form 19 April 2021; Accepted 21 April 2021
Available online 28 April 2021
0022-1139/© 2021 Elsevier B.V. All rights reserved.
I.G. Logvinenko et al. Journal of Fluorine Chemistry 246 (2021) 109799
ω-trifluorometoxy alkanesulfinates adopting the known methods affording sulfinate 29 in overall 28% yield for three steps (Scheme 2).
[39–41]. In this way, 2-mercaptopyrimidine was treated with triflate 21 Since the above method turned out to be inappropriate for obtaining
to give sulfide 22, which was oxidized with MCPBA into the corre β-(trifluoromethoxy)ethane sulfonyl chloride (19), we paid our atten
sponding sulfone 23. However, when the latter compound was subjected tion to other approaches where the use of strong bases was avoided.
to the action of sodium methoxide in methanolic media, β-elimination Thereby we envisioned the installation of the sulfonyl chloride func
took place; thus the conversion into corresponding vinylsulfone 24 tionality via the nucleophilic substitution of the triflate group by the
occurred instead of sulfinate 25 formation (Scheme 1). This confirms our thioacetate anion followed by oxidative chlorination [34,35,42–47].
previous finding that the CF3O group can be considered as a In this way, potassium thioacetate was treated with β-(tri
pseudo-halogen acting as a leaving group not only in the substitution, fluoromethoxy)ethyl triflate (21) in refluxing acetonitrile (Scheme 3).
but also in β-elimination reactions (although so far, we observed this Notably, the use of triflate as the leaving group was essential at this step;
only for the β-CF3O-substituted derivatives) [24]. in our previous study, we have shown that the analogous bromide un
VAt the same time, γ-(trifluoromethoxy)propane bromide 26 partici dergoes nucleophilic substitution at the OCF3 moiety [24]. The desired
pated the above reaction sequence without any complications, eventually β-(trifluoromethoxy)ethyl thioacetate (30) was obtained in 63% yield.
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I.G. Logvinenko et al. Journal of Fluorine Chemistry 246 (2021) 109799
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I.G. Logvinenko et al. Journal of Fluorine Chemistry 246 (2021) 109799
3. Conclusions
4.1. General
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I.G. Logvinenko et al. Journal of Fluorine Chemistry 246 (2021) 109799
4.2. General procedure for the preparation of 2-((ω-(trifluoromethoxy) 4.4. Sodium 3-(trifluoromethoxy)propane-1-sulfinate (29)
alkyl)thio)pyrimidines 22 and 27
The solution of sulfone 23 (1.58 g, 5.8 mmol) in MeOH (10 mL) was
K2CO3 (1.8 g, 13 mmol) was added to the stirred solution of added to the stirred ice-cold solution of MeONa (prepared from Na (134
pyrimidine-2-thiol (1.23 g, 11 mmol) in DMF (20 mL) and the resulting mg, 5.8 mmol) and MeOH (20 mL)). The reaction mixture was allowed
suspension was cooled to 10 ◦ C followed by dropwise addition of triflate to equilibrate to r.t. and left to react with stirring overnight. Then it was
21 or bromide 26 (10 mmol) maintaining the internal temperature evaporated at reduced pressure, the residue was triturated with MTBE
below 15 ◦ C. The reaction mixture was allowed to equilibrate to r.t. and (10 mL) and filtered to give the title sulfinate 29. Yield: 1.01 g (81 %);
left to react with stirring overnight. Then it was poured into ice-cold white powder. 1H NMR (500 MHz, D2O) δ 4.08 (tt, J = 6.7, 3.6 Hz, 2H),
water (100 mL) and extracted with EtOAc (3 × 40 mL). The combined 2.92 (td, J = 6.7, 3.6 Hz, 2H), 2.03 (p, J = 6.7 Hz, 2H). 13C NMR (126
organic layer was sequentially washed with water (3 × 40 mL) and brine MHz, DMSO-d6) δ 121.4 (q, J = 253.4 Hz), 66.2, 47.2, 23.9. 19F NMR
(3 × 40 mL), dried (Na2SO4) and evaporated at reduced pressure to give (376 MHz, DMSO-d6) δ –60.8. LC/MS (CI): m/z = 208 [M–H+NH3]–.
the title product 22 or 27. Anal. calcd. for C4H6F3NaO3S: C 22.44; H 2.82; S 14.97. Found: C 22.53;
H 2.91; S 14.94.
4.2.1. 2-{[2-(Trifluoromethoxy)ethyl]thio}pyrimidine (22)
From triflate 21 (2.62 g, 10 mmol), pyrimidine-2-thiol (1.23 g, 11 4.5. S-[2-(Trifluoromethoxy)ethyl]ethanethioate (30)
mmol), and K2CO3 (1.8 g, 13 mmol). Yield 1.85 g (83%); yellow liquid.
1
H NMR (400 MHz, CDCl3) δ 8.51 (d, J = 4.9 Hz, 2H), 6.99 (t, J = 4.9 Hz, Triflate 21 (13.0 g, 49 mmol) was added dropwise to the stirred
1H), 4.22 (t, J = 7.1 Hz, 2H), 3.42 (t, J = 7.1 Hz, 2H). 13C NMR (126 suspension of KSAc (7.94 g, 70 mmol) in MeCN (60 mL) maintaining the
MHz, CDCl3) δ 170.9, 157.4, 121.5 (q, J = 255.1 Hz), 116.9, 65.6 (t, J = internal temperature at 10–15 ◦ C. The reaction mixture was allowed to
3.2 Hz), 29.1. 19F NMR (376 MHz, CDCl3) δ –61.0. LC/MS (CI): m/z = equilibrate to r.t. and left to react with stirring overnight. Then it was
225 [M+H]+. Anal. calcd. for C7H7F3N2OS: C 37.50; H 3.15; N 12.50; S poured into ice-cold water (200 mL) and extracted with Et2O (4 × 50
14.30. Found: C 37.49; H 3.08; N 12.65; S 14.40. mL). The combined organic layer was sequentially washed with water
(1 × 50 mL) and brine (1 × 50 mL), dried (Na2SO4) and evaporated at
4.2.2. 2-{[3-(Trifluoromethoxy)propyl]thio}pyrimidine (27) atmospheric pressure and distilled to give the title product 30. Yield
From bromide 26 (1.04 g, 5 mmol), pyrimidine-2-thiol (0.61 g, 5.92 g (63%); yellow liquid; b.p. 102–105 ◦ C. 1H NMR (500 MHz, CDCl3)
5.5 mmol), and K 2CO3 (1.8 g, 13 mmol). Yield 0.86 g (80%); yellow δ 4.03 (t, J = 6.5 Hz, 2H), 3.15 (t, J = 6.5 Hz, 2H), 2.35 (s, 3H). 13C NMR
liquid. 1H NMR (500 MHz, DMSO-d6) δ 9.09 (d, J = 4.8 Hz, 2H), 7.86 (151 MHz, CDCl3) δ 194.6, 121.4 (q, J = 255.3 Hz), 65.6, 30.5, 27.7. 19F
(t, J = 4.8 Hz, 1H), 4.20 (t, J = 6.5 Hz, 2H), 3.75–3.66 (m, 2H), 2.12 NMR (376 MHz, CDCl3) δ –61.3. LC/MS (CI): m/z = 146
(p, J = 6.5 Hz, 2H). 13C NMR (126 MHz, DMSO-d6) δ 165.1, 159.7, [M–CH3COH+H]+. Anal. calcd. for C5H7F3O2S: C 31.92; H 3.75; S
125.3, 121.6 (q, J = 256.4 Hz), 66.7, 47.4, 22.3. 19F NMR (376 MHz, 17.04. Found: C 32.24; H 3.87; S 16.97.
DMSO-d6) δ –59.4. LC/MS (CI): m/z = 239 [M+H]+. Anal. calcd. for
C8H9F3N2OS: C 40.33; H 3.81; N 11.76; S 13.46. Found: C 40.71; H 4.6. General procedure for the preparation of isothiuronium salts 31 and
3.64; N 11.72; S 13.55. 32
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I.G. Logvinenko et al. Journal of Fluorine Chemistry 246 (2021) 109799
of CH2Cl2 (50 mL) and 36% aqueous HCl (50 mL) and cooled with an ice 4.12. Ethenesulfonamide (34)
water bath. Then KClO3 (3.84 g, 31 mmol) was added portionwise
maintaining the temperature below 5 ◦ C. Then the reaction mixture was Sulfonyl chloride 19 (420 mg, 2 mmol) was added dropwise to liquid
allowed to stir at 0 ◦ C for 2 h. The organic layer was set apart and the ammonia (20 mL). Then the reaction mixture was allowed to evaporate
water layer was extracted with CH2Cl2 (2 × 25 mL). The combined at atmospheric pressure followed by equilibrating to r.t. The residue was
organic layer was sequentially washed with water (1 × 25 mL) and brine diluted with EtOAc (50 mL), dried (Na2SO4), filtered and evaporated at
(1 × 25 mL), dried (Na2SO4) and evaporated at reduced pressure. Thus reduced pressure affording the title sulfonamide 34. Yield 150 mg
obtained residue was distilled in vacuo to give sulfonyl chloride 19. (70%); colorless liquid. For spectral data see [77].
Yield 3.53 g (63%). Physical and spectral characteristics were identical
to those as described below. 4.13. 3-(Trifluoromethoxy)propane-1-sulfonamide (35)
From isothiuronium bromide 32 (57 g, 0.2 mol). Yield 10.5 g (23%); Supplementary materials
yellowish liquid; b.p. 58–60 ◦ C (1 mbar). 1H NMR (500 MHz, CDCl3) δ
4.17 (t, J = 5.8 Hz, 2H), 3.87 (t, J = 7.4 Hz, 2H), 2.41 (p, J = 6.3 Hz, 2H). Supplementary material associated with this article can be found, in
13
C NMR (151 MHz, CDCl3) δ 121.3 (q, J = 255.9 Hz), 65.3, 63.7 (q, J = the online version, at doi:10.1016/j.jfluchem.2021.109799.
2.9 Hz), 24.4. 19F NMR (376 MHz, CDCl3) δ –61.6. LC/MS (CI): m/z =
207 [M–H]– (for the corresponding acid). Anal. calcd. for C4H6ClF3O3S: References and notes
C 21.20; H 2.67; S 14.15. Found: C 20.95; H 2.86; S 13.93.
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