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Structure of Biological Macromolecules: Chemical Equilibria
Structure of Biological Macromolecules: Chemical Equilibria
Structure of Biological Macromolecules: Chemical Equilibria
Structure of Biological
Macromolecules
Chemical Equilibria
When the reactants and products are of similar stability, the reaction is
reversible.
• All substances present are being made and unmade at the same
rate, so their concentrations are constant at equilibrium
ka [ B]eq
ka
K eq = =
kb [ A]eq kb
Chemical equilibrium
Must contain a lone pair of electrons to bind the H+ ion, e.g. NH3, CO32-, OH-.
Acids and Bases
Acid and Bases strength
HCl, HBr,
-
HNO3, H3PO3 ,
H2SO4,
CH3COOH,
C6H5COOH,
HNO2, H3PO4
NaOH, KOH,
CaO, Mg(OH)2
NH3, C5H5N
Less commonly used is the pOH scale. The “OH” comes from OH-, more
commonly used for very basic solutions.
Example Problem:
Just as:
[H3O+ ] x [OH- ] = Kw
pH + pOH = 14
-log10[H3O+] + -log10[OH -] = -log10Kw
pH + pOH = -log10Kw
@ 25oC, pH + pOH = -log (1 x 10-14)
Chemical equilibrium and acid strength
The Concepts of Ka and Kb
pKa = -log10 Ka
For bases:
pKb = -log10 Kb
Acid strength
Titration
Strong
base
analyte
Acid strength
Determination of pKa
Buffers
When small quantities of H3O+ or OH- are added to the buffer, they
cause a small amounts of one buffer component to convert into
the other.
Le Chatelier’s Principle
How buffers work
How buffers work
An example
Solution of 0.001 M acetic acid and 0.001 M sodium acetate is a
‘buffer solution’
Determine the pH of this solution given the Ka = 1.73 x 10-5
How buffers work
Hendersson-Hasselbalch equation
How buffers work
Calculating buffers
Example: You need a buffer solution with pH = 4.00
Choose an acid with pKa as close as possible to the desired
pH value
Formic acid has Ka = 1.77 x 10-4 ( pKa = 3.75)