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Gomella - Sepsis
Gomella - Sepsis
146 Sepsis
Neonatal sepsis is a clinical syndrome of systemic illness accompanied by bacteremia occurring
in the first month of life. It can be classified into 2 relatively distinct syndromes based on the age
of presentation: early-onset and late-onset sepsis. These 2 entities will be discussed separately.
infant is showing central nervous system (CNS) symptoms, then meningitis, intracranial
hemorrhage, drug withdrawal, and inborn errors of metabolism are considered.
B. Laboratory studies
1. Cultures. Blood and other normally sterile body fluids (eg, tracheal aspi-
rate and CSF) should be obtained for culture. Body surface cultures are not
recommended.
a. Blood cultures. Modern, computer-assisted automated blood culture systems use
optimized enriched culture media with antimicrobial neutralization properties;
they provide continuous-read detection and are able to identify up to 94% to
96% of all microorganisms by 36 hours of incubation. Results may vary because
of a number of factors, including maternal antibiotics administered before birth,
organisms that are difficult to grow and isolate (ie, anaerobes), and sampling
error with small sample volumes (the minimum volume for blood culture is
1 mL). The concerns about low-level bacteremia and the effect of intrapartum
antibiotic administration are not substantiated as these systems have been
shown to reliably detect bacteremia at a level of 1 to 10 colony-forming units
per mL if a minimum blood volume of 1 mL is inoculated. Additionally, several
studies have reported no effect of intrapartum antibiotic therapy on time to
positivity since the culture media contains antimicrobial neutralization elements
that efficiently neutralize β-lactam antibiotic agents as well as gentamicin. One
aerobic blood culture is typically obtained in cases of EOS, however, the use of 2
separate culture bottles (1 aerobic and 1 anaerobic) may provide the opportunity
to determine if commensal species are true infections by comparing growth in
the 2 cultures. In some clinical situations where the infant is critically ill, it may
be appropriate to treat for “presumed” sepsis despite negative cultures.
b. Lumbar puncture. Some controversy currently exists regarding whether a
lumbar puncture (LP) is needed in asymptomatic newborns being worked up
for presumptive EOS. Many institutions perform LPs only on infants who are
clinically ill, infants who have CNS symptoms such as apnea or seizures, or
in cases of documented positive blood cultures or if the decision is made to
extend antibiotics beyond 48 hours for presumptive clinical sepsis.
c. Urine cultures. In neonates <24 hours of age, a sterile urine specimen is not
recommended given that the occurrence of UTIs is exceedingly rare in this
age group.
d. Tracheal cultures may be obtained shortly after intubation (within 3 hours)
in ill neonates with a clinical picture suggestive of early-onset pneumonia or
if the mother developed intraamniotic infection with overwhelming EOS of
the newborn. Tracheal aspirates done after several hours or days of intubation
are of limited value.
2. Gram stain. Gram staining is especially helpful for the study of CSF. Gram-
stained smears and cultures of amniotic fluid are helpful in diagnosing intraam-
niotic infection. A Gram stain of tracheal aspirate can show the infecting
microorganism in EOS/pneumonia.
3. Molecular testing. Molecular methods for detection of neonatal sepsis in blood
include polymerase chain reaction (PCR) and DNA microarray–based meth-
ods. Most of these tests hold the promise of rapid detection directly from blood
without prior culture combined with high sensitivity and specificity in relation
to cultures and with using small volume of blood. A recent Cochrane review
that evaluated 35 studies found a summary estimate of sensitivity of 0.90 and
specificity of 0.93 and concluded that molecular assays have the advantage of
producing rapid results and may perform well as add-on tests.
4. Other laboratory tests
a. Complete blood count with differential. These values alone are very non-
specific. There are reference values for total white blood cell (WBC) count
and absolute neutrophil counts as a function of postnatal age in hours
1178 INFECTIOUS DISEASES
(they peak during the first 12–14 hours of age; see Chapter 78, particularly
Tables 78–1 and 78–2). Neutropenia may be a significant finding with an
ominous prognosis when associated with EOS. The presence of immature
forms is more specific but still rather insensitive. Ratio of immature to total
polymorphonuclear cells (I/T) >0.2 has good predictive value, if present. The
diagnostic yield of WBC count improves when testing is done after 6 hours
of age. A variety of conditions other than sepsis can alter neutrophil counts
and ratios, including maternal hypertension and fever, neonatal asphyxia,
maternal intrapartum oxytocin, hypoglycemia, stressful labor, meconium
aspiration syndrome, pneumothorax, and even prolonged crying. Serial WBC
counts obtained several hours apart may be helpful in establishing a trend.
Decreased platelet count can be associated with EOS; however, this is usually
a late sign and very nonspecific.
b. Acute-phase reactants (APRs). APRs are complex multifunctional group
comprising complement components, coagulation proteins, protease inhibi-
tors, C-reactive protein (CRP), and others that rise in concentration in the
serum in response to inflammation. The inflammation may be secondary
to infection, trauma, or other processes of cellular destruction. An elevated
APR does not distinguish between infectious and noninfectious causes of
inflammation. Except for CRP and procalcitonin (PCT), most APRs are not
commercially available for routine testing.
i. C-reactive protein is an APR that increases the most in the presence of
inflammation caused by infection or tissue injury. The highest concentra-
tions of CRP are reported in patients with bacterial infections, whereas
moderate elevations typify chronic inflammatory conditions. Synthesis of
CPR by hepatocytes is modulated by cytokines. Interleukin (IL)-1β, IL-6,
IL-8, and tumor necrosis factor (TNF) are the most important regulators
of CRP synthesis. CRP secretion starts within 4 to 6 hours after the inflam-
matory stimulus and peaks at approximately 36 to 48 hours. The biologic
half-life of CRP is 19 hours, with a 50% reduction daily after the acute-
phase stimulus resolves. A single normal value (<1 mg/dL) cannot rule out
infection because the sampling may have preceded the rise in CRP; if a
single value is obtained, it needs to be done after 18 hours of age. If CRP is
obtained, serial determinations are better than a single value. Two normal
CRP determinations (8–24 hours after birth and 24 hours later) have been
shown to have a negative predictive value of 99.7% for proven neonatal
sepsis. CRP elevations in noninfected neonates have been seen with fetal
hypoxia, respiratory distress syndrome (RDS), and meconium aspiration;
after trauma/surgery; and after immunizations. Serial abnormal CRP val-
ues alone should not be used to decide whether to administer antibiotics
in the absence of a culture-confirmed infection. A false-positive rate of
8% has been found in healthy neonates. Nonetheless, CRP is a valuable
adjunct in the diagnosis of sepsis (ruling it out when serial CRPs are low),
monitoring the response to treatment, and guiding duration of treatment.
ii. Procalcitonin is a propeptide of calcitonin that is released by paren-
chymal cells in response to bacterial toxins. A recent systematic review
showed a sensitivity of 0.85 and specificity of 0.54 for detection of neo-
natal sepsis (EOS and late-onset sepsis [LOS]) at the PCT cutoff of 2.0
to 2.5 ng/mL. A recent multicenter randomized controlled trial showed
that PCT seems to have some utility in guiding the duration of antibiotic
therapy in neonates with suspected EOS. A physiologic increase in the
PCT concentration occurs within the first 24 hours of birth.
iii. Cytokines interleukin-6, interleukin-8, and tumor necrosis factor are
produced primarily by activated monocytes and macrophages and are
major mediators of the systemic response to infection. Studies have shown
that combining cytokines with CRP may be better than using CRP alone.
146: SEPSIS 1179
be performed on women with unknown GBS status and no intrapartum GBS risk
factors. IAP should be given if the NAAT testing returns positive or an intrapartum
risk factor develops regardless of NAAT results. In addition, the guidelines specifi-
cally addressed threatened preterm labor (PTL) and preterm prelabor rupture of
membranes (pPROM) with detailed algorithms. Briefly, women with threatened
PTL or pPROM should be screened for GBS colonization on admission unless a GBS
culture was obtained within the preceding 5 weeks. In both of these situations, women
should receive GBS prophylaxis (typically for 48 hours) unless the screening results
are negative. The recommendations also provide clarification on optimal GBS cultur-
ing methods. On the neonatal side, the GBS guidelines (published by AAP) review the
epidemiology of neonatal GBS disease and provide specific algorithms for neonatal
management based on risk assessment and gestational age (see next sections).
B. Neonatal risk assessment for infants born at ≥35 weeks’ gestation. The AAP
report acknowledges and endorses 3 commonly used approaches to risk assessment
among infants born at ≥35 weeks’ gestation as follows:
1. Categorical risk assessment. This approach uses risk factor (mainly maternal
intrapartum fever–oral temperature >38°C) to identify infants at increased
risk for EOS due to GBS (Figure 146–1A). Different versions of this approach
A B C
Categorical Risk Assessment Neonatal Early-Onset Enhanced Observation
Sepsis Calculator
No antibiotics or any
Routine antibiotics < 2 hrs prior
to birth
newborn care
FIGURE 146–1. Options for EOS risk assessment among infants born ≥35 weeks’ gestation.
(A) Categorical risk assessment. (B) Neonatal Early-Onset Sepsis Calculator. (The screenshot
of the Neonatal Early-Onset Sepsis Calculator [https://neonatalsepsiscalculator.kaiserpermanente
.org/] was used with permission from Kaiser-Permanente Division of Research.) (C) Enhanced
observation. aConsider lumbar puncture and CSF culture before initiation of empiric
antibiotics for infants who are at the highest risk of infection, especially those with critical
illness. Lumbar puncture should not be performed if the infant’s clinical condition would be
compromised, and antibiotics should be administered promptly and not deferred because
of procedure delays. bAdequate GBS IAP is defined as the administration of penicillin G,
ampicillin, or cefazolin ≥4 hours before delivery. (Reproduced with permission from Puopolo KM,
Lynfield R, Cummings JJ, et al: Management of Infants at Risk for Group B Streptococcal Disease,
Pediatrics. 2019 Aug;144(2). pii: e20191881.)
146: SEPSIS 1181
risk factors (Figure 146–1C). Infants who appear ill at birth and those
who develop signs of illness over the first 48 hours after birth are treated
empirically with antibiotic agents (after blood culture is obtained). Among
term infants, “good clinical condition” at birth is associated with a reduction
in risk for EOS of approximately 60% to 70%. Researchers at 1 center in Italy
reported a cohort of 7628 term infants who were managed with a categorical
approach to risk identification and compared the outcomes with a cohort of
7611 infants who were managed with serial physical examinations every 4 to
6 hours through 48 hours of age. Significant decreases in the use of laboratory
tests, blood cultures, and empirical antibiotic agents were observed in the
second cohort. Two infants who developed EOS in the second cohort were
identified as they developed signs of illness. This approach is embraced by
the NICHD workshop on chorioamnionitis. Centers that adopt this approach
need to establish processes to ensure serial, structured, documented physical
assessments and develop clear criteria for additional evaluation and empirical
antibiotic administration. Physicians and families must understand that the
identification of initially well-appearing infants who develop clinical illness is
not a failure of care, but rather an anticipated outcome of this approach to EOS
(including EOS due to GBS). Additionally, it may be reasonable to consider
supplementing the structured clinical examination with a limited evaluation
(eg, CBC, CRP) at 6 hours of age.
The AAP guidelines stop short of recommending one approach over
the other. Instead, they recommend that birth centers consider the devel-
opment of locally tailored, documented guidelines for EOS risk assessment
and clinical management. They also recommend ongoing surveillance once
guidelines are implemented.
C. Neonatal risk assessment for infants born at ≤ 34 6/7 weeks’ gestation. The AAP
report on GBS addresses infants born at ≤34 6/7 weeks’ gestation at risk for GBS
in a similar fashion to infants at risk from all other causes of EOS. It indicates that
those infants can be categorized by level of risk for EOS by the circumstances of
their preterm birth as follows (Figure 146–2):
1. Preterm infants at highest risk for EOS. Infants born preterm because of
maternal cervical incompetence, preterm labor, pPROM, clinical concern for
intraamniotic infection, and/or acute onset of unexplained nonreassuring fetal
status are at the highest risk for EOS. Such neonates should undergo EOS evalu-
ation with a blood culture and empiric antibiotic treatment.
2. Preterm infants at lowest risk for EOS. Preterm infants at lowest risk for EOS
(including EOS due to GBS) are those born under circumstances that include all
of these criteria: (1) maternal and/or fetal indications for preterm birth (such as
maternal preeclampsia or other noninfectious medical illness, placental insuffi-
ciency, or fetal growth restriction), (2) birth by cesarean delivery, and (3) absence
of labor, attempts to induce labor, or any ROM before delivery. Acceptable initial
approaches to these infants include (1) no laboratory evaluation and no empiri-
cal antibiotic therapy or (2) blood culture and clinical monitoring. For infants
who do not improve after initial stabilization and/or those who have severe
systemic instability, the administration of empirical antibiotics may be reason-
able but is not mandatory.
3. Preterm infants delivered for maternal and/or fetal indications but who are
ultimately born by vaginal or cesarean delivery after efforts to induce labor
and/or with ROM before delivery. Those infants are subject to factors associ-
ated with the pathogenesis of EOS due to GBS or other bacteria. If the mother
has an indication for GBS prophylaxis and appropriate treatment (penicillin,
ampicillin, or cefazolin >4 hours before delivery) is not given or if any other
concern for infection arises during the process of delivery, the infant should
be managed as recommended above for preterm infants at higher risk for EOS
146: SEPSIS 1183
infection monitoring
cardiovascular instability
Yes
Blood culturesb
Empiric antibiotics
FIGURE 146–2. EOS risk assessment among infants born ≤34 weeks’ gestation. aIntraamniotic
infection should be considered when a pregnant woman presents with unexplained decreased
fetal movement and/or there is sudden and unexplained poor fetal testing. bLumbar
puncture and CSF culture should be performed before initiation of empiric antibiotics for
infants who are at the highest risk of infection unless the procedure would compromise the
infant’s clinical condition. Antibiotics should be administered promptly and not deferred
because of procedural delays. cAdequate GBS IAP is defined as the administration of
penicillin G, ampicillin, or cefazolin ≥4 hours before delivery. dFor infants who do not
improve after initial stabilization and/or those who have severe systemic instability, the
administration of empiric antibiotics may be reasonable but is not mandatory. (Reproduced
with permission from Puopolo KM, Lynfield R, Cummings JJ, et al: Management of Infants at
Risk for Group B Streptococcal Disease, Pediatrics. 2019 Aug;144(2). pii: e20191881.)
II. Incidence of neonatal late-onset sepsis. The overall incidence of primary sepsis (EOS
and LOS) is 1 to 2 per 1000 live births. The incidence of LOS in term infants is hard
to know; however, a study that looked at late preterm infants hospitalized in the first
3 months of life identified LOS in 6.3 per 1000 admissions. According to the CDC,
late-onset GBS infection rates have remained relatively stable over the past 20 years
and are not impacted by intrapartum antibiotics prophylaxis (0.32 per 1000 live births
in 2015). Incidence of LOS is much higher for VLBW infants; according to data from
the NICHD Neonatal Research Network (NICHD-NRN), the incidence is 32% and
appears to be decreasing in recent years (37% in 2005, 27% in 2012).
III. Pathophysiology of neonatal late-onset sepsis. LOS is usually more insidious
(compared to EOS), but it can be fulminant at times. It is usually not associated with
early obstetric complications. In addition to bacteremia, these infants may have an
identifiable focus, most often meningitis in addition to sepsis. Bacteria responsible
for LOS and meningitis include those acquired after birth from the maternal genital
tract (vertical transmission) as well as organisms acquired after birth from human
contact or from contaminated equipment/environment (nosocomial). Therefore,
horizontal transmission appears to play a significant role in LOS. The reasons for
the delay in development of clinical illness, the predilection for CNS disease, and
the less severe systemic and cardiorespiratory symptoms are unclear. Transplacental
transfer of maternal antibodies (also in breastmilk) to the mother’s own vaginal flora
may play a role in determining which exposed infants become infected, especially in
the case of GBS infections. In case of nosocomial spread, the pathogenesis is related
to the underlying illness and debilitation of the infant, the flora in the neonatal
intensive care (NICU) environment, and invasive monitoring and other techniques
used in the NICU, especially the use of peripherally inserted central catheters
(PICCs). Breaks in the natural barrier function of the skin and intestine allow
opportunistic organisms to invade and overwhelm the neonate. Infants, especially
the premature, have an increased susceptibility to infection because of underlying
illnesses and immature immune defenses that are less efficient at localizing and
clearing bacterial invasion.
A. Microbiology. The pathogens that cause LOS or nosocomial sepsis tend to vary
in each nursery; however, coagulase-negative staphylococci (CONS), especially
Staphylococcus epidermidis, are the most predominant (53% of cases in NICHD-
NRN). Other microorganisms causing LOS include gram-negative rods (including
Pseudomonas, Klebsiella, Serratia, E coli, and Proteus), S aureus (both methicillin-
susceptible and methicillin-resistant), GBS, and fungal microorganisms.
B. Antibiotic resistance. Antibiotics resistance, especially to Enterobacteriaceae
such as E coli, is an emerging problem in many NICUs. Multiple mechanisms
of resistance may be present simultaneously. Resistance resulting from produc-
tion of chromosomally encoded or plasmid-derived AmpC β-lactamases or from
plasmid-mediated extended-spectrum β-lactamases (ESBLs) occurs primarily in
E coli, Klebsiella species, and Enterobacter species but has been reported in many
other gram-negative species. Resistant gram-negative infections have been associ-
ated with nursery outbreaks, especially in VLBW infants. Organisms that produce
ESBLs typically are resistant to penicillins, cephalosporins, and monobactams and
can be resistant to aminoglycosides. Carbapenemase-producing Enterobacteriaceae
(CPE) also have emerged, especially Klebsiella pneumoniae, Pseudomonas aeru-
ginosa, and Acinetobacter species. ESBL- and carbapenemase-producing bacteria
often carry additional plasmid-borne genes that encode for high-level resistance to
aminoglycosides, fluoroquinolones, and trimethoprim-sulfamethoxazole.
IV. Risk factors of neonatal late-onset sepsis
A. Prematurity and low birthweight. Prematurity (<37 weeks’ gestation) is the single
most significant factor correlated with sepsis. The risk increases in proportion to
the decrease in birthweight and GA (GA <25 weeks: 41%; GA 25–28 weeks: 21%;
GA 29–32 weeks: 10%). Being small for gestational age increases the risk further.
1186 INFECTIOUS DISEASES
2. Urinary tract imaging. Imaging with renal ultrasound, renal scan, and possibly
voiding cystourethrogram should be considered when UTI accompanies sepsis.
VII. Management of neonatal late-onset sepsis. Isolation precautions for all infectious dis-
eases, including maternal and neonatal precautions, breast feeding, and visiting issues,
can be found in Appendix F.
A. Prevention of neonatal nosocomial late-onset sepsis. A subset of nosocomial
sepsis is central line–associated bloodstream infections (CLABSIs). Although
primary prevention of CLABSI relies on minimizing the use of central lines, novel
technologies such as antiseptic- and antimicrobial-impregnated catheters in addition
to meticulous care during PICC insertion and maintenance are key factors in
preventing CLABSIs. Quality improvement initiatives that focus on adherence to best
practices of catheter insertion and maintenance (NICU Central Catheter Bundles)
have resulted in widespread reduction in CLABSIs across different NICUs. Some of
those bundles were adopted and disseminated through statewide collaboratives such
as the California Perinatal Quality Care Collaborative (CPQCC). Hand hygiene is the
single most important strategy for avoiding transmission of contagions in the NICU.
Fresh maternal milk contains a number of substances responsible for innate immune
and humoral responses against pathogens; therefore, promotion of breast feeding
is considered a key step in the prevention of NICU infections. Medical stewardship
of antibiotics, steroids, and H2 blockers is mandatory; indiscriminate use of these
agents has been associated with increased nosocomial sepsis. Enhancement of the
enteric microbiome composition with the possible use of probiotics may restore gut
immune function and help prevent NEC and sepsis. In a recent meta-analysis of 37
trials, probiotics were associated with a small, but statistically significant, reduction in
the risk of LOS compared with placebo or no treatment. Use of bioactive substances
with known anti-infective properties such as lactoferrin may be helpful. A recently
published Cochrane review that included 6 trials suggested that lactoferrin
supplementation to enteral feeds with or without probiotics may decrease LOS
and NEC in preterm infants. However, no recommendations can be made until
ongoing trials that enrolled >6000 preterm neonates are completed. Finally, specific
and targeted pharmacologic prophylactic interventions have been used with some
success. For example, specific antifungal prophylaxis with fluconazole has been
associated with significant reduction in invasive fungal infection; it is recommended
in NICUs that experience high rates of invasive candidiasis. However, the use of
pagibaximab, a recombinant monoclonal antibody targeting staphylococcal species,
does not appear to offer protection against gram-positive CLABSIs in the NICU.
B. Empiric antibiotic therapy. Treatment is most often begun before a definite caus-
ative agent is identified. In nosocomial sepsis, the flora of the NICU must be con-
sidered in choosing antibiotics; however, staphylococcal coverage with vancomycin
plus an aminoglycoside such as gentamicin or amikacin is usually begun. Some
NICUs use a cefazolin or nafcillin for staphylococcal coverage instead of vanco-
mycin. The empirical treatment for suspected LOS in a neonate admitted from the
community is ampicillin and gentamicin; cefotaxime can be added only when there
is a concern for meningitis. Dosages are presented in Chapter 155.
C. Continuing therapy is based on culture and sensitivity results, clinical course, and
other serial laboratory studies (eg, CRP or PCT). If an ESBL-producing organism,
such as K pneumoniae, is suspected or identified, then carbapenem is the drug
of choice (with aminoglycoside for double coverage). Of the aminoglycosides,
amikacin retains the most activity against ESBL-producing strains. An aminogly-
coside or cefepime can be used if the organism is susceptible, because cefepime
does not induce chromosomal AmpC enzymes. Monitoring for antibiotic toxicity
is important, as well as monitoring levels of aminoglycosides and vancomycin.
D. Complications and supportive therapy are reviewed under the EOS section of this
chapter (page 1184). In particular, administration of intravenous immunoglobulin
to neonates with suspected or proven LOS does not result in reduction in mortality
147: SYPHILIS 1189
147 Syphilis
I. Definition. Syphilis is a sexually transmitted infection caused by Treponema pallidum,
which is a thin, motile spirochete that is extremely fastidious, surviving only briefly
outside the host. The Centers for Disease Control and Prevention (CDC) issued a
case definition of congenital syphilis (CS) in 2018 as follows: a condition caused by
infection in utero with T pallidum. A wide spectrum of severity exists, from inap-
parent infection to severe cases that are clinically apparent at birth. Laboratory cri-
teria for diagnosis entail demonstration of T pallidum by: (1) darkfield microscopy
of lesions, body fluids, or neonatal nasal discharge; or (2) polymerase chain reaction
(PCR) or other equivalent direct molecular methods of lesions, neonatal nasal dis-
charge, placenta, umbilical cord, or autopsy material; or (3) immunohistochemistry or
special stains (eg, silver staining) of specimens from lesions, placenta, umbilical cord,
or autopsy material. Cases are classified as confirmed (by laboratory diagnosis) or
probable. Probable CS is a condition affecting an infant whose mother had untreated
or inadequately treated syphilis at delivery, regardless of signs in the infant, or an infant
or child who has a reactive nontreponemal test for syphilis (Venereal Disease Research
Laboratory [VDRL], rapid plasma reagin [RPR], or equivalent serologic methods) and
any 1 of the following: (1) any evidence of CS on physical examination; (2) any evidence
of CS on radiographs of long bones; (3) a reactive cerebrospinal fluid (CSF) VDRL test;
(4) an elevated CSF leukocyte (white blood cell [WBC]) count or protein (without other
cause) in a nontraumatic lumbar puncture. Suggested parameters for abnormal CSF
WBC and protein values include the following: during the first 30 days of life, a CSF
WBC count of >15 WBC/mm3 or a CSF protein >120 mg/dL is abnormal; after the
first 30 days of life, a CSF WBC count of >5 WBC/mm3 or a CSF protein >40 mg/dL is
abnormal, regardless of CSF serology. Adequate treatment is defined as completion of
a penicillin-based regimen, in accordance with CDC treatment guidelines, appropriate
for stage of infection, initiated ≥30 days before delivery.