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Icu5 Clostridioides Difficile Infection 3
Icu5 Clostridioides Difficile Infection 3
Microbiome in
Critical Illness
Microbiome in Sepsis and COVID-19, F. Forfori, in Critical Patients, M.G. Olvera-Ramos, G. Castillo-
S. Ferrari, A. Isirdi, F. Corradi Gutiérrez, G.A. Bautista-Aguilar et al.
The Intestinal Microbiome in Critical Illness, The Role of the Microbiome and Nutritional Therapy
N.J. Klingensmith, C.M. Coopersmith in Critical COVID-19, V.A. Bolaños-Toscano, S.E.
Martínez-Vázquez, A. Kammar-García et al.
Microbiome and Pneumonia in Children, C. Guitart,
I. Jordan, E. Esteban Safer Intubation Practices in Critically Ill Patients
– What We Learned During the COVID-19 Pandemic
Microbiome and Probiotics: Do They Really Work? That Should Not Be Forgotten, P.V. Mendes, B.A. Besen,
Y. Longhitano, C. Zanza, T. Romenskaya et al. L. de Azevedo
Clostridioides difficile Infection: A Serious Methylene Blue for Vasoplegic Syndrome Post Cardiac
Complication of Intestinal Microbiome Alteration Surgery , B. Gladwin, P. Young
icu-management.org @ICU_Management
229
COVER STORY: MICROBIOME IN CRITICAL ILLNESSS
mgor_04@hotmail.com
of Intestinal Microbiome
Alteration in Critical Patients
Gabriela Castillo-
Gutiérrez
Intensive Care Unit
Hospital General San Juan
del Río
Querétaro, Mexico
dra.castillog@hotmail.com
Clostridioides difficile (C. difficile) infection is a potentially serious complica-
tion in critical patients admitted to the Intensive Care Unit (ICU). It generally
occurs because of an alteration of the intestinal microbiota due to antibiotic
Gabriela Alejandra exposure that must be timely identified and diagnosed to start proper and
Bautista-Aguilar early management.
Intensive Care Unit
Hospital General San Juan
del Río
Querétaro, Mexico Clostridioides difficile (C. difficile) is a Gram- through three levels of control: first, gastric
bagy8919@gmail.com positive anaerobic, spore-forming, toxin- acid is responsible for eradicating ingested
producing rod. Previously known as Clos- microorganisms; secondly, the mucosa,
tridium difficile, it was renamed in 2016 which has a single layer of columnar epithe-
to its current name, which reflects the lial cells (0.1 mm thick), acts as a physical
Ernesto Deloya- taxonomic differences between this species barrier, blocking the bacteria and toxins
Tomas
and other members of the Clostridium movement into circulation; and, finally,
Intensive Care Unit
Hospital General San Juan genus. Spores, present in the environment, the reticuloendothelial system traps and
del Río
Querétaro, Mexico are spread by the fecal-oral route. Five destroys the microorganisms that cross the
percent of adults and 15-70% of infants mucosa (Martínez-Rodríguez et al. 2018).
deloyajmr@hotmail.com
E_DeloyaMD are colonised by C. difficile and there is a The gastrointestinal tract is widely
prevalence in hospitalised patients or nursing colonised, being the large intestine the
homes residents. After the introduction of most populated region, which reaches up
Éder Iván Zamar- antibiotics, the role of C. difficile in the patho- to 1012 bacteria per gram of fecal matter
rón-López genesis of large-intestine diseases increased. (1-1.5 kg per weight). Knowing this fact
Intensive Care Unit
Hospital IMSS Number 6
The mortality rate directly related to has allowed us to understand the impor-
Tampico C. difficile infection (CDI) is estimated at tant protective role that this intraluminal
Tamaulipas, Mexico
5%, while the mortality associated with ecosystem plays, which prevents invasion
ederzamarron@gmail.com CDI complications reaches 15% to 25% by pathogenic microbes capable of causing
ederzamarron
and up to 34% in intensive care units. disease. The effect of antibiotics on the intes-
Currently, CDI has become one of the most tinal microbiota is well documented. These
important nosocomial infections, affecting show a long-term reduction in bacterial
Orlando R. Pérez-
Nieto all hospital wards (Czepiel et al. 2019). diversity after their use, which decreases
Intensive Care Unit resistance to colonisation. Furthermore,
Hospital General San Juan
del Río
Pathophysiology this microbiota modification after anti-
Querétaro, Mexico The digestive tract extends from the mouth biotic treatment facilitates the transfer of
orlando_rpn@hotmail.com to the rectum. Its covering mucosa, with drug-resistance genes (Portillo et al. 2002;
OrlandoRPN an approximate 300 m2 surface, acts as a Meyer et al. 2014).
barrier against microbial invasion, mainly C. difficile is a bacterium that forms
Risk Factors
Risk factors for CDI include being 65
years or older, previous hospitalisation,
recent antimicrobial therapy (particularly
third-generation cephalosporins, amoxi-
cillin-clavulanate, clindamycin, and newer
fluoroquinolones), immunosuppression,
and proton pump inhibitors.
Likewise, there are factors associated
with the patient themselves, related to
advanced age, such as chronic diseases
and multiple comorbidities of which Figure 1. Pathophysiology of Clostridioides difficile infection
inflammatory bowel disease, chronic liver systemic symptoms such as fever, leukocy- absence of a different cause of diarrhoea,
disease, and immunosuppression stand out tosis, and hypoalbuminaemia. The absence a stool sample should be collected for
(De Roo and Regenbogen 2020). of diarrhoea may indicate the progression of laboratory analysis. However, for paralytic
fulminant disease. Although a wide variety ileus, formed stool samples should not be
Clinical Conditions of predictors of poor prognosis have been tested for CDI (Di Masi et al. 2018).
The CDI clinical conditions are highly described, there is still no international
heterogeneous, ranging from asymp- consensus for the severe CDI definition. Diagnosis
tomatic carrier status, mild to moderate Progression to fulminant colitis is relatively Only toxigenic strains, which produce
diarrhoea, to life-threatening fulminant uncommon (1-3% of all CDIs). Mortality toxins A and B, are pathogenic. Accord-
colitis. Although the incubation period remains high due to the development of ing to the European Society for Clinical
is not precisely described, some reports toxic megacolon with colonic perforation, Microbiology and Infectious Diseases
suggest it lasts from 2 to 3 days, but more peritonitis, septic shock, and subsequent (ESCMID) guidelines, CDI is defined as
recent studies show that it can be longer organ dysfunction (Sartelli et al. 2019). a condition compatible with CDI plus
than 3 days, and it depends on each indi- Severity markers include advanced microbiological evidence of toxins A and
vidual. The CDI can affect all parts of the age (≥65 years), leukocytosis (> 15 × B that produce C. difficile in stool, without
colon, but the distal segment is the most 109/L), lower blood albumin levels (< evidence of another cause of diarrhoea, or
commonly infiltrated. Most patients with 2.5 g/dL), elevated serum creatinine levels patients with pseudomembranous colitis
CDI have mild diarrhoea and experience (≥ 133 µM or ≥ 1.5 times the baseline), (Di Masi et al. 2018).
spontaneous recovery after 5-10 days of temperature > 38.5, severe underlying Currently, there is no single stool test
completing the course of antibiotics (Samore disease or previous immunodeficiency to be used as a standalone test for diagnos-
et al. 1994; McDonald et al. 2018). (Zhong et al. 2019). In a recent study, it ing CDI. Several laboratory tests detect free
To make an effective diagnosis of CDI, was shown that human serum albumin is toxins in the stool (enzyme immunoassay
both clinical symptoms and a positive lab- capable of binding to the IIa domain of (EIA), cell cytotoxicity neutralisation assay
test result are required (Zhong et al. 2018). toxins A and B of C. difficile, which prevents (CCNA), C. difficile presence (EIAs that detect
The clinical condition ranges from mild its internalisation in host cells. This could glutamate dehydrogenase (GDH)), or the
diarrhoea to severe illness or fulminant partially explain the hypoalbuminaemia presence of a toxigenic C. difficile strain
colitis. Up to 30% of patients can develop with a CDI severity marker. (toxigenic culture (TC)), and nucleic acid
a recurrent CDI. Although diarrhoea is the amplification tests (NAAT) (Di Masi et al.
characteristic symptom, it may not be pres- Recurrent CDI 2018).
ent at the onset of the disease, possibly due In 10-30% of cases, a recurrence of symp- Among these methods, stool TC or CCNA
to colon dysmotility, either from previous toms develops after initial therapy for C. have been considered the gold standard
underlying conditions or from the disease difficile and it becomes a clinical chal- for the diagnosis of CDI for the past 30
process (Sartelli et al. 2019). lenge. For a patient who has presented 1 years. Paradoxically, neither of these are
to 2 cases, the risk of more recurrences is used routinely due to technical problems
Mild to Moderate CDI 40-65%. Recurrent CDI may result either and the prolonged time of results (Di Masi
Diarrhoea is defined as loose stools corre- from the germination of resident spores et al. 2018).
sponding to types 5-7 of the Bristol Stool that remain in the colon after completing 1. Toxicogenic culture (TC) is a two-step
Chart. The patient must present at least three the antibiotic treatment or from reinfection method that first isolates C. difficile strains
diarrhoeal stools for 24 consecutive hours from an environmental source. Recurrence on a selective medium, and then evalu-
or more frequently than normal for the is present when the CDI reappears within ates in vitro toxin-producing capacity.
patient. Diarrhoea must be accompanied 8 weeks of the onset of a previous episode Different selective media are available
by mild abdominal pain and cramps. If and after its symptoms resolve once the and are generally derived from cyclo-
prolonged, it can cause an alteration of initial treatment is completed. In daily serine-cefoxitin fructose agar. Currently,
the water and electrolyte balance as well practice, it is difficult to distinguish between additives such as sodium taurocholate
as dehydration (Zhong et al. 2018). recurrence due to relapse or reinfection or lysozyme have been added to stimu-
(Di Masi et al. 2018). late germination. Chromogenic media
Severe CDI When a patient has diarrhoeal stools that have also been developed since it has
Severe CDI is associated with increased correspond to Bristol stool types 5-7 and been shown that they are as sensitive
abdominal pain and cramps, as well as has other CDI risk factors together with the as other selective media, which allows
identification within 24 hours after nosing CDI. Due to its high negative neutralisation with C. difficile antitoxin
incubation. Plates are incubated in an predictive value (NPV) of 80-100%, or Clostridium sordelli antitoxin sera,
anaerobic atmosphere for 48 hours at a negative test will rule out infection. which share the same antigens. Despite
36 ± 1 °C. After isolating a strain, its However, a positive result must be CCNA’s good sensitivity, specificity, and
pathogenic potential is determined by confirmed by a second, more specific low cost, this method is currently used
testing for in vitro toxin production. test that detects toxins (Di Masi et al. by a very limited number of laboratories
TC is considered the gold standard for 2018; Crobach et al. 2016). due to the lack of standardisation and
detecting toxigenic C. difficile and for 4. Toxin A/B enzyme immunoassay (EIA): prolonged response time (Di Masi et
evaluating new molecular methods. EIA is a fast test that provides results in al. 2018).
Although TC results take too long for about 1 to 2 hours, and has a 75-85% According to the ESCMID, no test is
routine diagnosis (2 to 5 days), culture sensitivity and a 95%-100% specificity. suitable as a stand-alone test for diagnosing
is essential for subsequent strain typing, Due to its low cost and ease, it is the CDI since they have a low positive predictive
molecular analysis, and antimicrobial most popular in laboratories. However, value. The best way to optimise the CDI
susceptibility determination (Di Masi many studies have highlighted its lack diagnosis is by combining two tests in a
et al. 2018; Crobach et al. 2016). of sensitivity (ranging from 29% to two-step algorithm (Figure 2). The first
2. Nucleic Acid Amplification Test (NAAT) 86%) in comparison to CCNC, which test should be a high negative predictive
for C. difficile: C. Difficile toxin genes were excludes its use as a stand-alone test value test (GDH or NAAT). The second
introduced in 2009. NAATs are based for the diagnosis of CDI (Crobach et test should be a high positive predictive
on a PCR method or isothermal ampli- al. 2016). value test (toxin A/B EIA). If the first test
fication. They have a higher sensitivity 5. Cell culture cytotoxicity neutralisation is negative, DCI is excluded; if it is posi-
(80-100%) and specificity (87-99%) assay (CCNA): It is considered the gold tive, a second test should be performed to
than EIA tests, so they can be used as a standard for detecting free toxins (main- confirm the diagnosis. If the second test is
CDI standard diagnostic test. NAAT, as ly toxin B) in stools. For this method, positive, the CDI diagnosis is confirmed;
a one-step algorithm, can increase the stool filtrates are inoculated onto a cell if it is negative, the case must be clinically
detection of asymptomatic colonisation; culture which is then observed for a evaluated. In this scenario, the possible
therefore, it should be performed in cytopathic effect evaluated at 36 ± 1 cause can be related to 3 situations: CDI
patients with high suspicion of CDI, °C after 1 or 2 days. The specificity of with toxin levels below the threshold of
or included in a two-step algorithm the cytopathic effect is evaluated by the detection, false-negative result, or C. difficile
starting with toxin detection. This test
has limitations such as its high cost and
some difficulties in its interpretation.
PCR detects the presence of a toxin-
encoding gene, thus confirming the
presence of toxin-producing C. difficile,
but this does not necessarily mean
that the strain is producing toxins at
that time, resulting in false positives
(Crobach et al. 2016).
3. Glutamate dehydrogenase (GDH)
tests: Glutamate dehydrogenase is a
metabolic enzyme expressed in all C.
difficile strains. A positive result only
indicates the presence of C. difficile,
without predicting the strain’s ability
to produce toxins. GCH can be detected
by immunoenzymatic assays (ELISA)
or immunochromatography. At present,
Figure 2. Diagnostic algorithm for Clostridioides difficile
different guidelines propose GDH EIA CDI: C. Difficile infection, EIA: enzyme immunoassay, NAAT: Nucleic acid amplification tests, GDH: EIA
tests as a detection method for diag- detecting glutamate dehydrogenase
carriage (Figure 2) (Crobach et al. 2016).the patient is symptomatic, the first step is be administered intravenously. The lack
Proper handling in the preanalytical to stop all antimicrobials. The selection of of response to metronidazole after 5 days
phase is extremely important as it can antibiotics should be based on the sever- of treatment is an indication for a change
lead to wrong results. The toxin present ity criteria, considering whether it is the from the antibiotic to oral vancomycin at
in a stool sample breaks down easily at first occurrence or a recurrence. For mild a 125 mg QID dose for 10 days (Abreu
room temperature and can no longer be to moderate initial infection, treatment et al. 2019; Johnson et al. 2021; Antonelli
detected after 2 hours. Thus, when the with oral vancomycin at a 125 mg QID et al. 2020).
sample is obtained it should be stored dose for 10 days is recommended (Abreu In severe complicated CDI, combina-
at 4 °C temperature and the test must be et al. 2019). Treatment with fidaxomicin tion treatment of oral vancomycin at 250
(a narrow-spectrum antibiotic of specific to 500 mg QID doses combined with
performed within the next 24 hours. The test
should only be performed on a diarrhoeal antibacterial activity due to its inhibition metronidazole 500 mg TID intravenously
of bacterial RNA polymerase) at a 200 for 14 days is the treatment of choice. In
stool sample. If the patient has ileus, a rectal
swab can be used. Tests in asymptomatic mg BID dose for 10 days is an alternative severe-complicated cases with abdominal
patients are not recommended, unless for to vancomycin. Recent clinical trials have distention or ileus, it is recommended to
epidemiological purposes. Repeat testing shown the non-inferiority of fidaxomicin administer vancomycin at a 500 mg QID
for C. difficile after successful completion
compared to vancomycin; it even has a lower dose via a rectal tube (Abreu et al. 2019;
of treatment is also not recommended, as recurrence rate than vancomycin (Polivkovaa Johnson et al. 2021; Antonelli et al. 2020).
some patients may have positive results et al. 2021). If vancomycin or fidaxomicin For patients with multiple recurrences,
without requiring continued or repeat are not available, it is recommended to vancomycin is recommended at a 125mg
treatment (Czepiel et al. 2019). use metronidazole as an alternative treat- QID dose for 10 to 14 days, followed by
ment, which is prescribed at a 500 mg TID rifaximin 400 mg TID for 20 days or fidax-
Treatment dose for 10 days. In patients who cannot omicin 200 mg BID for 10 days (Abreu et
Handling
Once a CDI diagnosis is confirmed and algorithm
if tolerate forroute,
the oral Clostridioides difficile
this antibiotic can infection
al. 2019; Polivkovaa et al. 2021).
Fecal transplant
Patients with a septic shock, or multiple o 3 or more episodes of mild to vention with antibiotics for patients with a
organ failure (with clinical evidence of toxic moderate CDI (1 initial and 2 recurrent CDI in the past 6 months to reduce
megacolon, peritonitis, or perforation), recurrences) when treatment with the risk of a subsequent CDI recurrence
who have failed treatment are candidates vancomycin for 6 to 8 weeks fails, after initial clinical recovery. In patients
for surgical intervention. Surgery should whether combined with another with a history of congestive heart failure,
also be considered in patients with severe alternative antibiotic (fidaxomicin, the US Food and Drug Administration
CDI who do not respond to antibiotic treat- rifaximin, nitazoxanide) or not. (FDA) advises that bezlotoxumab should
ment. The surgical intervention of choice is o 2 or more episodes of CDI be reserved for use only when the benefit
subtotal colectomy with terminal ileostomy with hospital admission and outweighs the risk. There are comparative
since segmental colectomies have a worse significant morbidity. trials of different anti-CDI recurrence
prognosis (Figure 3) (Sartelli et al. 2019). • Severe or fulminant CDI that does strategies using narrow-spectrum anti-
Fecal microbiota transplant (FMT) is a not respond to standard treatment biotics that target C. difficile, restoration
safe and effective option in CDI patients with within 48 hours. of the microbiota by biotherapeutics or
two recurrences or severe episodes, when The microbiota donor can be a known FMT, or increase of host immune response
antimicrobial treatment fails. It consists of donor (family member, friend, spouse) or with single-administered agents, such as
the infusion of stool (containing the entire a universal donor (anonymous). The donor bezlotoxumab (Johnson et al. 2021).
community of the intestinal microbiota) must be a healthy subject without digestive In conclusion, C. difficile infection is a
from a healthy donor to the digestive tract or extradigestive comorbidities, and risk serious disease that must be appropriately
of the patient to cure or improve a disease. of transmitting an infectious agent, and recognised and treated due to its high
The purpose of FMT in CDI treatment is have not used antibiotics in the last three risk of spread and its potentially seri-
to restore the diversity of microorganisms months. Routes of FMT administration ous complications. Therefore, avoiding
in the colonic microbiota and to stop C. include nasogastric tube, colonoscopy, the indiscriminate use of antibiotics for
difficile growth. enema, or capsule, which all have been hospitalised patients is crucial.
FMT is indicated for the following shown effective (Abreu et al. 2019; Chun-
cases: Wei et al. 2021). Conflict of Interest
• Recurrent C. difficile infection. Bezlotoxumab can be used as a co-inter- None.
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