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PHARM 451 Antiinfective Agents
PHARM 451 Antiinfective Agents
MEDICINAL CHEMISTRY II
DRUGS ACTING ON INFECTIOUS DISEASES
2
History
• Joseph Lister 19th century introduced antiseptic principles using
carbolic acid during surgery.
• This lead to drastic decrease in postsurgical infections.
• Paul Ehrlich sought to develop agents which will be selective for
microorganisms and spare the human host (magic bullets). He
discovered that certain dyes could selectively stain target cells
• This formed the basis for antimicrobial chemotherapy.
• Local Anti-infective agents are referred to as GERMICIDES. There
are 2 main types of germicides.
• Antiseptics and Disinfectants
Ideal properties of Antiseptics Desirable properties of
Disinfectants Classification
Rapid and sustained lethal Rapid lethal action
activity
May be based on
Active in the presence of body Good penetration into organic • Chemistry of the agents
fluids matter
• Biological property
Low surface tension to enable Compatible with organic • Therapeutic indication
it spread into the wound compounds
Cetylpyridinium chloride
Dyes
• Gentian violet
• Basic Fuchsin
• Methylene Blue
Basic Fuchsin
• Aldehydes
• Chlorhexidine
• Ethylene oxide
• Nitrofurans
(2)
Quinolones
PHARM 451
J. N. A. ADDOTEY (Dr. rer. nat.)
19
Quinolones
• synthetic antibacterial agents patterned after nalidixic acid
• Isosteric heterocyclic groupings in this class include the
• quinolones (e.g., norfloxacin, ciprofloxacin, lomefloxacin)
• the naphthyridines (e.g., nalidixic acid, enoxacin)
• the cinnolines (e.g., cinoxacin)
• Clinically used for the treatment of urinary tract infections due to:
• good oral absorption,
• activity against common Gram-negative urinary pathogens, and
• comparatively higher urinary (compared with plasma and tissue)
concentrations
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• Newer members are
useful for the
treatment of various
serious systemic
infections.
22
• Nalidixic acid and the earliest members (e.g., oxolinic acid, cinoxacin)
are largely effective against Gram-negative bacteria,
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SAR
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Isosteric replacements of N for C atoms at positions;
• 2 (cinnolines e.g., cinoxacin),
• 5 (1,5-napthyridines),
• 6 (1,6-naphthyridines), and
• 8(1,8-naphthyridines) retains activity.
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26
SAR
Alkyl substitution at position 1 is
essential for activity, with lower
alkyl (methyl, ethyl, cyclopropyl)
compounds generally having
progressively greater potency.
27
https://youtu.be/IkKZ_gxAOXI 28
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Toxicity
• CNS effects (Less than 1%)
• attributed to antagonism of -aminobutyric acid (GABA)
receptors in the brain by the quinolones.
• low incidence of CNS effects largely due to inability to
penetrate the blood-brain barrier.
• Quinolones possessing a halogen atom at the 8-position
(e.g., lomefloxacin) have the highest incidence of
phototoxicity,
• those having an amino (e.g., sparfloxacin) or methoxy
group at either the 5- or 8-position have the lowest
incidence.
30
Ionization equilibria
• 2 classes
a. Single ionizable group (nalidixic acid, oxolinic acid)
• pKa= 5.6 to 6.4 (benzoic acid = 4.2)
b. fluoroquinolones
• pKa values for the more basic N atom of the piperazino group fall in
the range of 8.1 to 9.3
• At physiological pH, exist predominantly as zwitterions
31
https://www.mdpi.com/1420-3049/18/9/11153/htm
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Interactions
• Based on chelating properties towards divalent and trivalent ions.
• Ca+2, Mg+2, Zn+2, Fe+2, Fe+3, and Bi+3
chelates are often insoluble in water,
Therefore???
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Ofloxacin and Levofloxacin
• Students to read on
• Activity
• ADME
34
Ciprofloxacin
• monohydrate phase of its hydrochloride salt
formulated for oral/ophthalmic administration.
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Metabolism
• Ciprofloxacin is eliminated by
renal and non-renal mechanisms.
• The drug is partially metabolized
in the liver by modification of the
piperazinyl group to at least four
metabolites.
• Ciprofloxacin and its metabolites
are excreted in urine by both
glomerular filtration and by
tubular secretion.
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Examples
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(3)
ANTIFUNGALS
PHARM 451
J. N. A. Addotey (Dr. rer. nat.)
38
Introduction Superficial Systemic
common Less common
• Fungal infections fall into two well-
defined groups: the superficial and Homogenous (mainly Heterogenous
dermatophytes) aetilogy
the deep seated mycoses
Mild superficial and Severe, deep
restricted lesions
• Opportunistic infections – form of
systemic mycoses
• Due to overuse/misuse of antibiotics,
steroids, immunosuppressants
• Eg. Systemic candidiasis, aspergillosis
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Classification
https://www.future-science.com/doi/10.4155/fmc-2018-0479
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General Mechanism action of Antifungal agents
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POLYENES
• isolated from soil bacteria of the genus Streptomyces
• Two groupings based on size of the macrolide ring.
• 26-membered–ring polyenes
• 38-membered macrocycles
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Polyenes
• Amphotericin B
• was purified from soil culture of
Streptomyces nodosus
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Nystatin
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Azoles
• The first members of the class were highly substituted
imidazoles, such as clotrimazole and miconazole.Later the
triazoles were developed
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SAR
48
SAR
• The basic structural requirement for members of the azole class is a weakly basic imidazole or
1,2,4-triazole ring (pKa of 6.5–6.8) bonded by a nitrogen–carbon linkage to the rest of the
structure.
• At the molecular level, the amidine nitrogen atom (N-3 in the imidazoles, N-4 in the triazoles) is
believed to bind to the heme iron of enzyme-bound cytochrome P450 to inhibit activation of
molecular oxygen and prevent oxidation of steroidal substrates by the enzyme.
• The most potent antifungal azoles possess two or three aromatic rings, at least one of which is
halogen substituted (e.g., 2,4- dichlorophenyl, 4-chlorophenyl, 2,4-difluorophenyl), and other
nonpolar functional groups.
• The halogen atom that yields the most potent compounds is fluorine
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• MOA
• large nonpolar portion of these molecules
mimics the nonpolar steroidal part of the
substrate for lanosterol 14-demethylase,
lanosterol, in shape and size.
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Ketoconazole
• The oral bioavailability of ketoconazole depends
on an acidic pH for dissolution and absorption
• Ketoconazole is a racemic compound, consisting
of the cis-2S,4R and cis-2R,4S isomers.
53
Ketoconazole
• Interactions
• Antacids and drugs such as H2-histamine antagonists and anticholinergics that inhibit gastric
secretion interfere with its oral absorption.
• Toxicity
• Ketoconazole is known to inhibit cholesterol biosynthesis, suggesting that lanosterol 14-
demethylase is inhibited in mammals as well as in fungi.
• High doses have also been reported to lower testosterone and corticosterone levels, reflecting
the inhibition of cytochrome P450-requiring enzymes involved in human steroid hormone
biosynthesis.
54
Fluconazole
• broad-spectrum
• suitable for both oral and IV administration as the free base.
• Excellent oral bioavailability, why?
• Not affected by gastric acidity
• Fluconazole has a relatively long elimination half-life.
• It penetrates well into all body cavities, including the CSF.
• Plasma protein binding of fluconazole is less than 10%
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Voriconazole & Posaconazole
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Allylamines
• interfere with an early step in
ergosterol biosynthesis,
namely, the epoxidation of
squalene catalyzed by
squalene epoxidase.
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• Naftifine is the original member of the class and is efficacious when
administered topically against superficial dermatomycoses.41
• Terbinafine can be utilized both topically and orally to treat fungal
infections of skin, nails, and hair and is the drug of choice
for dermatophyte onchomycosis
Naftifine Terbinafine
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Griseofulvin
• Griseofulvin is a fungistatic agent
• Griseofulvin is a mitotic spindle poison
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Synthesis
• Students to find out!
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Nucleoside antifungals
• Flucytosine/fluorocytosine
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Mechanism of action of 5-FC.
2/24/2021 62
Topical Agents
• ACIDS
• Fatty acids
• Similar to sebum (natural antifungal), found in and on the skin of
Adults
• Fatty acids and salts have feeble antifungal activity
• Eg
• Propionic acid (Zn), Caprylic acid (Na, Zn)
• Triacetin (Structure & MOA)?
63
Other acids
• Salicylic acid
• used externally in ointments and solutions
• for its antifungal and keratolytic properties.
• By itself, salicylic acid is a poor antifungal agent.
• Benzoic acid
• appreciable antifungal effects, but it
• cannot penetrate the outer layer of the skin in infected
areas.
• Whitfield’s Ointment
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Phenols and derivatives
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(4)
ANTIBACTERIAL
SULFONAMIDES/SULFONES
PHARM 451
J. N. A. Addotey (Dr. rer. nat.)
66
ANTIBACTERIAL SULFONAMIDES
• first effective chemotherapeutic agents that could be used
systemically for the cure of bacterial infections in humans.
• Have become less useful due to resistance and emergence of other
antiinfective agents eg. Penicillins
• Lead compound was red dye Prontosil
• Prontosil showed in-vivo antibacterial activity while it was in-vitro
inactive
67
Sulphanilamide – active form
these findings ushered in the modern era of chemotherapy and the concept of the prodrug.
68
• Today, there are a few sulfonamides and especially sulfonamide-
trimethoprim combinations that are used extensively for
opportunistic infections in patients with AIDS.
• The sulfonamide-trimethoprim combination can be used for
treatment and prophylaxis of PCP .
• Additionally, cerebral toxoplasmosis can be treated in active infection
or prophylactically.
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Classification
• can be grouped into three classes on the basis of their use:
• oral absorbable agents
• oral nonabsorbable eg. Sulphasalazine
• topical agents eg. sodium sulfacetamide ophthalmic drops.
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Nomenclature of the Sulfonamides
• Sulfonamide is a generic term that denotes
three different cases:
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MOA
• Sulfonamides mimic P-aminobenzoic acid (PABA) which is the normal
substrate for dihydropteroate synthetase. This means that
sulfonamide will bind in the same manner as PABA:
The competitive nature of the sulfonamides’ action means that the drugs do no
permanent damage to a microorganism; hence, they are bacteriostatic.
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Crystalluria and the pKa
• Sulfonamides are mostly excreted in urine as acetylated metabolite.
• They are relatively water insoluble mainly due to the formation of the
acetylated metabolites.
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Sulfonamides with reduced crystalluria formation
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Sulfonamide derivatives
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Sulfonamide prodrugs
• Succinyl sulfathiazole:
• Mainly used for intestinal infections.
• It has a carboxylic acid at the amine side chain… ionized in intestine… will not
be absorbed…. So it has only local effect.
• The gradual hydrolysis of the amide will liberate the active form; sulfathiazole.
Students to read on sulfasalazine
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SULFONES
• They are less effective than the sulfonamides.
• Sulfones were used to treat leprosy after it was found that sodium
glucosulfone was experimental effective.
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• Four variations on this structure have given active compounds:
1. Substitution on both the 4- and 4’-amino functions
2. Monosubstitution on only one of the amino functions
3. Nuclear substitution on one of the benzenoid rings
4. Replacement of one of the phenyl rings with a heterocyclic ring
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(5)
Antitubercular and Antilepral
agents
PHARM 451
J. N. A. Addotey (Dr. rer. nat.)
82
Antitubercular Agents
• The discovery of the antitubercular activity of the aminoglycoside
antibiotic streptomycin by Waksman et al. in 1944 ushered in the
modern era of tuberculosis treatment.
• This development was quickly followed by discoveries of the
antitubercular properties of p-aminosalicylic acid (PAS) first and then,
in 1952, of isoniazid.
• Later, the usefulness of the synthetic drug ethambutol and,
eventually, of the semisynthetic antibiotic rifampin was discovered.
83
Anti-tuberculous drugs
First-line Second-line
• Isoniazid • Clarithromycin
• Rifampicin • Ciprofloxacin
• Ethambutol • Capreomycin
• Pyrazinamide • Cycloserine
• Kanamycin
• Amikasin
• streptomycin
Isoniazid
• It is prepared by reacting the methyl ester of isonicotinic acid
with hydrazine (hydrazinolysis of esters in alcoholic solutions)
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MOA
• the principal effect of isoniazid is to inhibit the synthesis of mycolic
acids
• MAs are extremely long chained, β-unsaturated, branched fatty acids,
which contribute to the impermeability of the cell envelope.
• They are confined essentially to mycobacteria and are therefore
considered as selective targets for anti-TB drugs
• MA is essential for survival, virulence, and antibiotic resistance of
MTB
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MOA
• A mycobacterial catalase–peroxidase enzyme complex (KatG) is required for the
bioactivation of isoniazid
• Generation of reactive species which attacks a critical enzyme for the production
of mycolic acid.
• The target for the action of INH has recently been identified as an enzyme that
catalyzes the NADH-specific reduction of 2-trans-enoylacyl carrier protein, an
essential step in fatty acid elongation
• This enzyme is encoded by a specific gene, inhA, in M. tuberculosis
87
MOA
• INH affects several pathways involved in
macromolecular synthesis, such as
• nucleic acid synthesis
• protein synthesis
• lipid synthesis
• carbohydrate synthesis
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Resistance
• very complex and involves mutations in a relatively large number of
genes.
• Among all the genes involved in INH resistance, mutation in katG
appears to be the major contributor
• Approximately 20% to 25% of INH-resistant clinical isolates display
mutations in the inhA gene, leading to altered proteins with
apparently reduced affinity for the active form of the drug.
• Interestingly, such INH-resistant strains also display resistance
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Ethionamide
• This nicotinamide has weak bacteriostatic activity in vitro
but, because of its lipid solubility, is effective in vivo.
• In contrast to the isoniazid series, 2-substitution
enhances activity in the thioisonicotinamide series.
• It is used in the treatment of isoniazid resistant
tuberculosis or when the patient is intolerant to isoniazid
and other drugs.
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Pyrazinamide
• Its antitubercular properties were discovered as a
result of an investigation of heterocyclic analogs of
nicotinic acid, with which it is isosteric.
• Pyrazinamide has recently been elevated to first-line
status in short-term tuberculosis treatment regimens
because of its tuberculocidal activity and
comparatively low short-term toxicity
• Since pyrazinamide is not active against metabolically
inactive tubercle bacilli, it is not considered suitable
for long-term therapy.
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• Pyrazinamide is maximally effective in Metabolism
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SAR Metabolism
• The dextro isomer is 16
times as active as the meso • Up to 80% is excreted unchanged,
isomer. with the balance being
• the length of the alkylene metabolized and excreted as 2,2’-
chain, (ethylenediimino)dibutyric acid
• the nature of the branching and the corresponding
of the alkyl substituents on dialdehyde.
the nitrogens, and • Structures?
• the extent of N-alkylation all
have a pronounced effect on
the activity.
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Aminosalicylic Acid
• PAS is administered orally in the form of the sodium salt, usually in
tablet or capsule form.
• Symptoms of gastrointestinal irritation are common with both the
acid and the sodium salt. Various enteric-coated dosage forms have
been used in an attempt to overcome this disadvantage.
• Other forms that are claimed to improve gastrointestinal tolerance
include the calcium salt, the phenyl ester, and a combination with an
anion exchange resin (Rezi-PAS).
• An antacid such as aluminum hydroxide is frequently prescribed.
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Metabolism
• The N-acetyl derivative is the principal
metabolite, with significant amounts of the
glycine conjugate also being formed.
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RIFAMYCINS
• obtained by fermentation from cultures of
Streptomyces mediterranei.
• They belong to a class of antibiotics called
the ansamycins that contain a macrocyclic
ring bridged across two nonadjacent
positions of an aromatic nucleus.
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MOA
• Rifamycins bind to the beta subunit of bacterial DNA-dependent RNA
polymerases to prevent chain initiation.
• Bacterial resistance to rifampin due to mutations leading to amino acid
substitution in the beta subunit.
• Cross resistance is common
• Rifampin is a powerful inducer of hepatic cyt P450 oxygenases. It can
markedly potentiate the actions of drugs that are inactivated by these
enzymes. Eg?
• should be combined with dapsone or some other leprostatic agent to
minimize the emergence of resistant strains of M. leprae.
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Cycloserine
• It is stable in alkaline, but unstable in
acidic, solutions. The compound slowly
dimerizes to 2,5-bis(aminoxymethyl)-
3,6-diketopiperazine in solution or
standing.
• Cycloserine is stereochemically related
to D-serine. However, the L-form has
similar antibiotic activity.
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MOA
• Cycloserine is presumed to exert its antibacterial action
by preventing the synthesis of cross-linking peptide of
bacterial cell walls.
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