Professional Documents
Culture Documents
EXPBIOMED - Module 4 Finalnotes
EXPBIOMED - Module 4 Finalnotes
EXPBIOMED - Module 4 Finalnotes
.am#ffI::
stamen
MODULE 1
Cst's mac
learning Outcomes Reproduction Angiosperm style )
:
in
understanding of evolution ( underlying processes leading to diversity & complexity ↳ requires pollen meet/travel to ovules cegglt
y
• to
-
,
•
biology : evolving science -
}
-
↳ available
types Fission Fragmentation Budding , vegetative propagation ,
:
, ,
protection / shell Lt impedes water loss ) 1 mother 's body protect embryo
spore Formation Parthenogenesis ,
[
:
fertilization c. R c. R
{
internal vs .
external
°" " "" " " ^^ "
"
" → "" " " ° ""
" " """ " "" ^ "" "" • *
"
-
faster release energy lactic acid or alcohol
-
{
Asexual sexual
larger organism size
parent one parent two parents -
super efficient Time for mating * multicellular terrestrial organisms emerged later
Efficiency Tmredg
E Requires extra E and even
budding site
.
i.
Imagine grape organism divide Itself into two unequal parts ( usually @
,
i.
Imagine bubbles ( spores) units of life that is packaged which doesn't require ↳ Hyphae absorb
= : filament branches to oxygen in soil (airspace 5)
'
fertilization ( loos of units) → Oz 1- coz can transfer across thin outer wall
* for dispersal to new locations G- can be
sexually produced as well ) Fermentation E. food
-
[from glucose → pyruvate
PARTHENOGENESIS ( A ) : Multicellular → Diploid individual
•
fungi bread miso olives beer wine
only
,
, , ,
unfertilized egg develops into new organism ( individual ) parent must be female
:
↳ Saccharomyces → Ethanol . Ethanol -1 CO2 CO2
Lt can be reproduce sexually as well )
,
(2n) ,
✗
-
Aspergillus 4
.
haploid form
give rise to gametes (requires fertilization)
-
gametophyte Respiration
-
→
in
plant roots croot adaptation based on the environment )
↳ For Fungi : 3. key stages
aerial roots ( pneumatophore ) for anoxic / waterlogged soil Cet
Mangrove)
-
① haploid Basidiospores →
plasmogamy Cattoplasm fused W 2 nuclei ) p nuclei fusion
.
② Dikoryotic mycelium lntn ) with basidium → Fertilization @ basidium ( karyogamy ) ↳ exchanges gas exposed → submerged ← Diploid
vary in its apatite ( length ) and density bÉdns → Roots to extract water by
-
+
support [ size / types )
: Oz intake → Coz exhale four ( possible ) stages ( not an animal use )
leaves ① Roots ⇐ (root hair cells) Vascular Sys .
-
increased SA for PS4 gas true roots -
xylem : water + mineral ions
Direct Diffusion -
requires net surface for gas to dissolve { then diffuse exchange t good for metabolism)
: underground
①
vascular plant organ
↳ reinforced with lignin → endure
hydrostatic pressure
skin based
cadrawced )
② integumentary modified overlapping branches ↳ nutrient cnn.p.a.mg ,s , +
⑧⑨(M&⑧Ñh ☒ ⑧MYgg
- -
fish vascular plants ! ↳ synthesize plant hormones allow increased plant size because
diversity and stricture varies
. .
u> stores
-
larger areas
for purposes
① Direct Diffusion ( Obtain Oxygen through surface ) (ex flat norm /sponges ) -
ex ) aerial , clasping prop , , contractile ↳ xylem endure pressure better
climbing stpportt.fm
to
Lp only in small K 1mm diameter : flat , sea animals ( wet surface) 90, uptake in substrate
→
enough rely
small oxygen obtained through to on outer membrane of cells other ingenious whys to obtain food
→ into vascularsystem
② Integumentary (skin based surface gas exchange into parasitic ( mistletoe ) : take nutrients from host
directly ) by penetrating plant wall W roots
-
circulation
carnivorous ( venus flytrap)
4 environment Lex earthworm ,
-
amphibians etc)
↳ wet/ moist skin ; derive nutrients from captured insects ; trapping structure
.
:
③ Trachea in insects ( tubes inside the
-
symbiosis w coral
.
↳ can be ventilated with muscle contraction ( influence of impermeable exoskeleton ) macromolecules → receive coz phosphates nitrogen compounds
,
,
→ not related to the circulatory Sys ( doesn't interact * leave when temp 9 (global warming issue
-
feedings animal in
.
~
I
branched folded thin tissue filaments counter current Ms ←
9
4> :
Diffusion : nutrient absorbed then an membrane ( Bactria ) passive or active
, .
-
⑤ Lungs
, -
Filterfeeding : eat everything then tilter the tater out onn consuming the prey
u>
amphibians
: air
sac like lung ; bronchial suction
-
↳ Reptiles : sac like ↳ straining organic matter (food) from mate ↳ requires filter structures
sometimes subdivided w aspirating pump Instead of mouth
-
diverse species
,
→ Cit blue whale 1 krill s)
↳ Mammals :
.
↳ Bird :
parallel tubes cpora bronchi ) w air sacs take up air -1 pump lungs krill 5 Blue whale
→ to fulfill high
1
prey krill
-
diving bell spider w personally aunted air bubble for ihderwuto dive
comb like structure fillers
-
fringed plate (fingernail ) baleen
Sloth w
lung attached to ribcage so diaphragm is not squeezed when hanging NHS
-
attachedto
.
but
-
, ,
no bereft give
→ producer ( autotrophs :
synthesizing own foods ) vs Consumer ( heterotrophs : eat ) ↳ no need energy in finding food ; but you have
to exert no control
↳ can be way to evolve sometimes to hold onto your host
one
classify organisms →
1
autotrophs heterotrophs tapeworm Jawless fish clamp reys / hogfish )
origin self + nutrition others 1- nutrition what? vertebrate gut parasite blood sucking parasite of fish
+
-4 use scolex to attach to intestinal
B A P F sucking head
-
Kingdoms B A P pl heterotrophs
-
now ? source inorganic nutrients macromolecules ( glucose ) + other nutrients external digestion
-
↳N P S etc
,
, by consuming other forms of life ↳
Fungi : feed thru absorption using hyphae ,
which secretes digestive enzyme breaking down
{
-
chemo autotrophs : (bacteria) take inorganic
-
Oxidate and then form ORAMK molecules humans i eat everything ↳ Insect :
taste with feet , excrete enzymes , suck up the
highlighted ,
-
omnivores :
source of E phototrophs (green plants bacteria, algae ) detritivores decomposer (decaying matter ) → diverse mouthparts : chewing piercing / smelling carving siphoning sponging
: -
: -
:
,
, ,
,
,
-
ancestral stateof heterotrophs (~ 4.517 my a) : earth full of
primo dial soup ( acid-base )
-
Jaws
↳ earliest form :
something close to bacteria ; primitive heterotrophs fed by acid 1- base up early fishes jawless but gin arches evolved into jaw (teeth followed soon after)
→ form of
fermentation taking organic molecule and chemically → reason why marine invertebrates declined
down breaking
photo autotrophs photosynthetic bacteria
: Teeth
-
→
Homo dents : an same teeth ; prevalent in sharks and reptiles
-
{
,
" "" " " "" " "" """ " "" " """
"° ↳ donjon fish : pull out the lower jaw (space between brain case & vertebrate)→ eat larger prey
Chemo extremophiles (perfect for harsh environment i. e. deep sea not volcano )
-
,
↳ dragonfly :( larvae ) hinged mouthpart extend Cfoid )
-
and retract
-
concentration) inefficient
cg, membrane (
photo f- inability to excrete eliminate may disrupt
-
,
or osmosis require water to obtain extra nutrients → or
µ
→ an 9 function can in principle
"
" "" " "" ^" " " """ " " Mh "" " "° """ ↳ the " "" " " Nd "" " *
* " Mb" "
the" °" " ""
Y" "
↳ bacteria ↳ solutes like protein environment
fungi some aquatic plants
, , amino acid etc
air, or in some cases hosts
,
by
,
:
active
-
energy expensive
transport :( mostly used > excretion h elimination that requires specific help
.
and
-
↳ this
organs / tells to do ↳ it allows efficiency → organism large and complex Akhtar mahntovncl and
↳ maybe you end up suboptimal location
-
plants : stomatal pores w guard cells @ outer surface of leaves and stem
q q
← guard cells in pairs controls the pore
opening by swelling /shrinking f( minimize
⑦
:
water loss)
← → inelastic
some
employ both
stomatal pore gas :
exchange ,
water loss hence water availability determine close /open -
animal : Flame cells ( excretory specialist) in freshwater invertebrates removing waste material Cilla pseudopod Flagella
↳ bundle proto nephritic ex ) hair covering outside of cells false feet long hair propelled around
flatworm / rotifers
: -
like
-
-
,
unicellular [ larger) -
unicellular amoeba push profusion from cell
specialized organs for excretion whip like and
-
animal 's
-
µ Nitrogen
-
→ vertebrates : kidneys co-ordinated movement particular direction can serve sensory function for
+ liver -1 associated glands
-
-
→ need space !
chemical charges
↳ space for
organs : coelom (space in between gut da ectoderm filled w when food is Kate
fluid ) make
0010M
-
'
↳ sperms have these (critical ]
W/O Collom : Acoelom ate / single thieving
coelom : W/ coeio mate ↳ helicobacter for ulcers
separate from gut ↳ marine worms have parapodia
space for internal organ development
-
exocytosis
: w lysosome , ↳ active propulsion cenidarians molluscs ) ,
↳
majority were removed W passive diffusion & osmosis ↳ active removal W Channels i expand -1
contracting of body muscle to take hater and push outwards .
↳ some
passively removed [diffusion /osmosis) ↳ actively using membrane channels
↳ for molluscs ( mouth to
uptake water ) + tentacles like pseudo feet and sensor
up control direction
→ penicillin Cfungi ) killed staphyloc.ci → development of penicillin
↳ variations :
mantle Ghats ) , muscular foot ; some as adults don't move
-
annelids → chaetae .
'
, react to ,
↳ , ,
terrestrial into soil ↳ early fish : Carti logons (sharks , rays) moving Wfm / tails (active w
↳ reverse of diffusion and osmosis of gradient cart it agirls fish
root hair cells following the chemical -
-
bony fish
→ for aerudtic : leaves E. roots ; importantpafhwayr increase SA ↳ Kye liver with low
density oil for buoyancy
↳ swim bladder
consumption by heterotrophs }
metabolism &
Nitrogenous waste followed by high :
protein ↳ lighter then bore
-
4- a
aÑatic fins to feet ?
bony fishes with long rays of bone some with substantial bored
-
terrestrial spiders ,
① [
Ammonia Urea Uric acid guanine → early amphibians gills by swim bladder lungs or rent lungs .
""" " M "" "" "" "" "" " "" " " " "
" " """ ↳ amphibian these require hater to reproduce ex] frog
days
"
" " : .
non-toxic non-toxic
-
requires lots of grater -
less water needed 91 Hint ?
-
no water
-
no water
=
Insects :
Elnseeta) Exoskeleton , six legs wings , moult ,
IN 9
per molecule 2 N per molecule 4 N per molecule 5N per molecule U> stiff membrane of exoskeleton straightened by veins → wings
no energy simple -4 ATP -1 -24 ATP + more E cost → from gills up early wings for locomotion in hotter surface reprodkl
high
-
-
archosaurs :
polyphyletic group reptiles and birds [both need eggsÑep%%%
Invertebrate ↳ birds from dromaeosanrs WI Hatters dy wings
excretory organs (annelids insects i coelom to exterior
-
or
→ to fly :
bone less dense ,
9 chest muscle, feathers , airsaes
↳ proton ephridia - nephridia 2 more
stance
oxygen
( simple ) :
marine worms
earthworms :( complex)
-
↳ involvement of hindgut in excretion 4 elimination LN waste w faces) → walk up right quicker locomotion Conger legs)
,
- :
↳ liver : breaks down
blood substances (toxin glucose RBC )
up reduction of big shortened pelvis , femur
toe in hard centered patella
.
, , ,
,
↳ accumulated excretion attract parasitic wasp → shoot out faeces Wanat plate
,
VETVRE 6 :
Fossils
DUY flies + Puny beetles : buns is nutritional → scent / polarized moonlight
-
↳ lay eggs in dung ↳ feed on duty (some locate others trait for deny providers ) ,
i. Presented remains of any preserved trace of once living organism
anoxic environment
-
ant -
aphid mutualism (secretions ↳ some hard structure, quickly courted woo being dissolved in
i.
Movement for food mating . , habitat and escaping predators ; essential forsurvival absolute dating : Radiometric method treasure radioactive decay of easiest
etc . . .
-
need to capture oxygen -
support hydrated , nutrient rich
.
-
Uv radiation new us
-
-
DNA damage extremely E- hunky from
, ,
strong currents
-
no structure
energy hungry
-
, ,
Extinction ↳ ma,
-
water level flutate ( shallow) -
light height -
new species evolve from originator +
Cell halls lots ofseeds increase chance new lineage
-
to
extinction loss of duesing
-
① :
substantial
.
new
lignin du park
-
Cilla I flagella large SA for lift 47 local or broad both posable
niche + absence
- -
-
seeds 4 spores
-
felt like protection
-
Enlarged muscle for flight Ordovician , Devonian Permian , Triassic Cretaceous of competitors
,
Fins / flippers I ,
&
-
genera
.
?⃝
Human driver extinction : Dodo ,
Tasmanian tiger Guinan greed )
d t
hurting hunting / habitatdestroyed
↳ gourd b4 heightened extinction rate heading toward mass extinction
✗
natural selection driver of evolution favoring certain
-
:
phenotypes for fitness
↳ cumulative change : evolution →
-
feeding of fish
→ natural Severin mutation , moth ""
Mr Paton
humans niche
Weinberg Theorem
,
Hardy drift
or ↳
partitioning
is maintained if
sexual reproduction genetic .
number of times based on size?
: o.eu/ic frequency case you
selection selection acts on dominant allele but cannot be fixated because recessive is
mutation random mating migrations genetic drift masked
-
→ no ,
no . no , no
,
'
↳
equal fitness ↳ Infinite pop size
- recessive allele shows delayed etteltdne to heterozygous genaotpe
=p -12 pq -1 92 I
.
↳ D= fp.gg + to fpyb and q ftbttz fpfb for allll " HMMM ↳ HBA / Hbs strong symptom be lethal defensive
=
← : not to , against malaria
- Chi -
=[co-¥
if f-Mwe loner than 0.05 Cdiffoerce is
.
2 →
✗ u> the most successful : 1.0 relative fitness
Observed / Expected y
ex) sg 0.155 0.155/1.12 =
0.14
LECTURE 8 :
population & Goll pool SA
1.12 1.0 = 10
" AA
diverse understanding of defining
"
population → pop .
allows .
- .
0.983 0.983/1.12 = 0.88
disease evolution , Pest onto ' LECTURE
↳ interact
-
,
.
small ,
anew
. .
µµoa+
-
distribution also matters: gene fowl interaction)
q
in MATED .
Bottleneck 4 Founders
-
structure matters as well :
mating random o r not ,
isolation → may cause genetic structure
↳ event that drastically reduces pop sites d- genetic
.
of pop -7 diversity
µ
-
Mutations are inevitable sway # of individuals of an species find new habitat to settle
not gelatin
rarely beneficial sometimes
↳ usually no effect at all , .
lethal
|
germ line somatic
-
→ increase homozygosity ,
fixation of alleles , less adaptive capacity
↳ especially deleterious alleles ↳ reduced variation
-
gametes heritable ,
-
→ health
damage via chemicals & radiation fertility issue
: wthout reason . random mutation or due to /
↳ can
↳ harder to adapt to changing climate
occur anywhere , may have impact it may not have impact -
M
↳
pop .
Can recover quickly but
the genetic diversity not
→ functional change or no
change → no
change
in expression → can cause it to be significantydnftecrt from parentpopulation
abundance meal be influenced
changes present
→
conservation ? how this can become speciation w/ adequate gents of
-
→ present us absent -
sterile
Reproduction ( asexual n . sexual Cinching )
-
impact of gene flow determined by the level of flow Chow much ) cm ) and
✓ ↳ the genetic Astana between them
Random mating Non -
random mutiny DP
big and/or Cm) is
= M( x-p ) either the difference is
→
/ tominbfapnotp
to
equal probability all
\
-
.
m =
great → significant deterrence is present
cruel
abortive disassoritve f-(A) migrant = ✗
µ
:
-
, feet ) sympatric
: size
.
bras ① Biological :
interbreeding natural populations reproductively isolated
ext Galapagos
variety of niche @ different Islands , different ② Phylogenic ancestor , shared distinctive characteristics
↳ different beaksize .
inherited , seeds
: common
resources same ecological niche
organism adopted particular
to
diverse beak size Cfixated) ③ Ecological sane set of ,
/
shape
:
→ settle ,
as well →
chance at reproduction
cichlid
-
Species)
Why define species ?
→ conservation ,
food , safety , medical , recreational
other species
do occur and continued in
-
-
Humans homo sapiens adapted neanderthals
,
to selection
-
sequencing , analyte ,
-
Genomic entire genome sequencing
:
-
for big data ,
bioinformatics : quality scores → confidence censor rates
-
some genomes are Wye , need sufficient
samplesite for relationship investigation
Phylogenetics branching + similarity in
-
↳ cladogram :
analysis of phylogenetic reuntoorxhip of mutations
ex)
Austrian people Cmitognome → maternal small mutations
, , , haploid
1- Vocational into 1-
temporal Cmoheulw clock ,
mutation rate
)
Hr
phylogenetic analysis + phy to geographic
LECTURE B :
what is life ? MODULE 3
-
µÑµ|
-
Maxwell 's Demon : how to not violate 2nd law of thermodynamics optlhnl .
⇒ biologically demons :
protein channels creating gradient to create the → determines were * live → predictable
→ ↳ niche
not 100% I efficient ability to do work
temp .
system .
homeotherm:c endothermic
by storing
=
life : about processing into ; homeostasis to keep it orderly f) use both internal regulation Ctx Sweating )
gem heat
..
- from inside
and behavioral conduction etc
level ↳ organism level ; moving to shade
:
↳ molecular :
protein channels
.
-
lower the metabolic rate (since it produces heat but at certain
only goal hits the basal here increase ut metabolic rate to reduce heat
LECTURE 14 :
Building boats
oriented
point it
and thermo
q regulate .
d -
generalist specialists
at climate increase 9 of specialist
,
pong
u, ↳ equator
•
Individual as a thermodynamic state homeostasis LECTURE 16 :
Relieving Into
,
, -
sweat , pore dehydration excretion , respiration ↳ white sheet of eggs → throw the hell
away Cremoviy are )
*
, ,
↳ evaporation
conduction -
ale or signal is symbolic and not intrinsic ; conveys information
overall entropy 9 → needs to be detected by recognizable
↳ chemical [ transit ifnfo
TEMPERATURE signals and odours ) pheromone
µ
doesnt
meaning but
w sane
BREATHING ex ) note heap hurt sane pheromone
metabolism hldtl matter =
conserved live another
myyzn close to one
i. homeostasis maintained ↳ BUG"
FEEDING until reproduction 6
sensory modalities chemical [ pheromone) olfaction
u> receptor -1 ligand
-
chemical -
magnetic
Mudtebolic Rate → heat output cweaoued though calorimetry) ekltrio'M mechanical [ conduction underwater
Electricity
-
cloth 06 -1 602 →
602 -1
61120 02 -
light sound ↳ ex) shark
⇒ Energy heat (fire of life)
-
-1
r
↳ direct : mean the heat ⇒ modern day : indie a-
calorimetry use gas visual modalities flight) Magnetic fled !
Mignetro receptor
baseline existence energy cost
nugatory (magnetic cult
:
↳ bird
-
activity energy cost for digesting muhfiry temp by onvironnnt muscle work ,
,
: can You see the spiderweb sound :
frequency
BMR ( Basal Metabolic Rate) Homeostatic endotherm @ thermo neutral zone (zone zoo ¢µz )
-
-
,
,
mechanical : vibration ↳ Bat Ultra 8MW to locomotion
SMR ( standard Metabolic Rate ) Ectoderm @ known temp navigate itself
↳spiders feel vibration
-
on web
-
.
-
field metabolic rate ( Baer step ✗ 2ns ) ( RMR ✗ C. 5) -
signal V1 . awl
,
↳ doing ever
deny action using heart water
tracking Ectoderm
↳ ex) signal for mating light d- fireflies
↳ ex ) haha be uses face odor to take a ace of predator 's presence
body time homeotherm ice
heterothermic
-
up disrupted by
signaling strategy
-
M= awb
b = ? I 73 ? ✗ =
3/4 waves on water surface $MkNm&^ ""
u> bright color → toxicity by aquatic unto boatmen
9
body weight A- :
SA =
✗
3 : ✗
2 =
predicted % .
-
signaling efficacy
↳ sane info different
↳ not due to heat lost as it was measured in thermoneutral zone ,
impact
" "
evolution favor signal efficacy (distinctiveness ) 1- greater reliever
Metabolic neb → work
bodynug
life
feeding ontogeny / history may favor abilities few cues but not mtte call unless it disadvantageous
to
§
-
g
- assimilation (digestion) -
-
growth → Juvenile → adult
99
maintenance innate : born with it ; know how to reacton its first encounter
metamorphosis
-
development ( maturation ,
hop" 'd / diploid modified result of experiences
-
learned :
. reproduction
size ,
clutch size , logevlety
Growth rates
E k ¥4 w
'
LECTURE 17 :
Declaring Info
-
ant -
Camouflaging and
mimicry 5.0 5.0
↳ retracts livelihood of being detected / recognized
parental core of reproduction
definitely
-
protection :
overmatching carrying offspring sitting
, ,
on
top of them
no count age ✗ → parent stay back for extra protection
↳ foraging
,
Masquerade :
pretend it is imintoetiy object cleaves stem
↳
,
Jett
Batesian mimic :
conflicted '
FIÑes
agressive mimic : mimic to hurt not hide : mother eithe leave
because it
lplaltract then or get pass by their security
, swim
'
✓
and faster runner
prey
-
①
cooperate care of 90mg
-5 better detection
)→
camouflage
fast runner
✓ ② sterile caste Eusocial G.e. bees)
mimicry
active defense - de
activate -
③ Overlapping generator
the defense
ex> Bat use sonar → moth have receptors to detect the sonar
+ foster
flying
better detect egg or abandon the rest
cuckoo :
parasite eggs →
µÑ
¥
↳ high mimicry → higher rejection rate
g.
↳ find new innocent host
autrutian Cuckoo :
super similar eggs
↳ auses host to be able to detect the hatched Young chick by right
→ predicted to mimic chick as well
LECTURE 18 :
Transferring Info
Genotype -1 Environment → phenotype t asexual much energyefficient
twice at foster but why
↳
delivery of information reproduction =
sexual ?
-
asexual species common in agriculture because they are homogenous
↳ sexual allow better adaptation to
varying environment
gametes are dimorphic because communicator; avoid binding to its ounce ,
-
:
External is .
Internal fertilization i
can be exploited as are
↳ signals needed to be present (location , receptivity )
→ facultative parthenogenesis or hermaphroditism doesn't require such
difficulty .
sexual selection
competition to get reproductive opportunity
-
↳ mate choice
competition → both signalling
or mace -
mace
L a
female choice fight between man
↳ colors, beauty etc .
" "
↳ less pheromone ↳
longer antennal
prevention of polyandry
↳ physical i stick themselves , mate guard , block the organ
up intently females
ignat :
destroy signaling pheromone areas or Edam late
substance that kill lower female receptivity