Nuclear magnetic resonance spectroscopy (NMR) uses radio waves to observe local magnetic fields around atomic nuclei. It is used to determine the structure of organic compounds and proteins. NMR works by applying an external magnetic field which causes energy transfer between nuclear spin energy levels. The energy absorbed or emitted is detected as a signal providing information about the chemical environment of the nucleus.
Nuclear magnetic resonance spectroscopy (NMR) uses radio waves to observe local magnetic fields around atomic nuclei. It is used to determine the structure of organic compounds and proteins. NMR works by applying an external magnetic field which causes energy transfer between nuclear spin energy levels. The energy absorbed or emitted is detected as a signal providing information about the chemical environment of the nucleus.
Nuclear magnetic resonance spectroscopy (NMR) uses radio waves to observe local magnetic fields around atomic nuclei. It is used to determine the structure of organic compounds and proteins. NMR works by applying an external magnetic field which causes energy transfer between nuclear spin energy levels. The energy absorbed or emitted is detected as a signal providing information about the chemical environment of the nucleus.
Nuclear magnetic resonance spectroscopy (NMR) uses radio waves to observe local magnetic fields around atomic nuclei. It is used to determine the structure of organic compounds and proteins. NMR works by applying an external magnetic field which causes energy transfer between nuclear spin energy levels. The energy absorbed or emitted is detected as a signal providing information about the chemical environment of the nucleus.
resonance spectroscopy (MRS), is a spectroscopic technique to observe local magnetic fields around atomic nuclei. It is a spectroscopy technique that is based on the absorption of electromagnetic radiation in the radiofrequency region 4 to 900 MHz by nuclei of the atoms. Over the past fifty years, NMR has become the preeminent technique for determining the structure of organic compounds. Of all the spectroscopic methods, it is the only one for which a complete analysis and interpretation of the entire spectrum is normally expected. *Principle of Nuclear Magnetic Resonance (NMR) Spectroscopy The principle behind NMR is that many nuclei have spin and all nuclei are electrically charged. If an external magnetic field is applied, an energy transfer is possible between the base energy to a higher energy level (generally a single energy gap). The energy transfer takes place at a wavelength that corresponds to radio frequencies and when the spin returns to its base level, energy is emitted at the same frequency. The signal that matches this transfer is measured in many ways and processed in order to yield an NMR spectrum for the nucleus concerned. *Applications of Nuclear Magnetic Resonance (NMR) Spectroscopy Spectroscopy is the study of the interaction of electromagnetic radiation with matter. NMR spectroscopy is the use of the NMR phenomenon to study the physical, chemical, and biological properties of matter.It is an analytical chemistry technique used in quality control.It is used in research for determining the content and purity of a sample as well as its molecular structure. For example, NMR can quantitatively analyze mixtures containing known compounds.NMR spectroscopy is routinely used by chemists to study chemical structure using simple one-dimensional techniques. Two-dimensional techniques are used to determine the structure of more complicated molecules.These techniques are replacing x-ray crystallography for the determination of protein structure.Time domain NMR spectroscopy techniques are used to probe molecular dynamics in solution.Solid state NMR spectroscopy is used to determine the molecular structure of solids.Other scientists have developed NMR methods-of measuring diffusion coefficients. *Chemical shift The precise resonant frequency of the energy transition is dependent on the effective magnetic field at the nucleus. This field is affected by electron shielding which is in turn dependent on the chemical environment. As a result, information about the nucleus' chemical environment can be derived from its resonant frequency. In general, the more electronegative the nucleus is, the higher the resonant frequency. Other factors such as ring currents (anisotropy) and bond strain affect the frequency shift. It is customary to adopt tetramethylsilane (TMS) as the proton reference frequency. This is because the precise resonant frequency shift of each nucleus depends on the magnetic field used. The frequency is not easy to remember (for example, the frequency of benzene might be 400.132869 MHz) so it was decided to define chemical shift as follows to yield a more convenient number such as 7.17 ppm. δ = (ν-ν0)/ν0 The chemical shift, using this equation, is not dependent on the magnetic field and it is convenient to express it in ppm where (for proton) TMS is set to ν0 thereby giving it a chemical shift of zero. For other nuclei, ν0 is defined as Ξ νTMS where Ξ (Greek letter Xsi) is the frequency ratio of the nucleus (e. g., 25.145020% for 13C). In the case of the 1H NMR spectrum of ethyl benzene the methyl (CH3) group is the most electron withdrawing (electronegative) and therefore resonates at the lowest chemical shift. The aromatic phenyl group is the most electron donating (electropositive) so has the highest chemical shift. The methylene (CH2) falls somewhere in the middle. However, if the chemical shift of the aromatics were due to electropositivity alone, then they would resonate between four and five ppm. The increased chemical shift is due to the delocalized ring current of the phenyl group.* Spin-spin couplingThe effective magnetic field is also affected by the orientation of neighboring nuclei. This effect is known as spin-spin coupling which can cause splitting of the signal for each type of nucleus into two or more lines.The size of the splitting (coupling constant or J) is independent of the magnetic field and is therefore measured as an absolute frequency (usually Hertz). The number of splittings indicates the number of chemically bonded nuclei in the vicinity of the observed nucleus. Spin-spin coupling is the interaction between the spin magnetic moments of different electrons and/or nuclei. In NMR spectroscopy it gives rise to multiplet patterns, and cross-peaks in two-dimensional NMR spectra. Between electron and nuclear spins this is termed the nuclear hyperfine interaction. Between electron spins it gives rise to relaxation effects and splitting of the EPR spectrum. Spin-spin coupling between spinning nuclei. The interaction between the spin magnetic moments of the different sets of H atoms in the molecule under study, is known as spin-spin coupling. It is imperative that a minimum of 2 sets of protons are present in adjacent positions. The magnetic spins of these resonating nuclei interact with each other and affect each other’s precession frequencies. The effective magnetic field (Beff) experienced by neighboring protons as a result of magnetic spins thereby affect the chemical shift values. [5] In addition to the chemical shifts, the nature of the peaks in the NMR spectrum is also affected.* Grignard reagents are extremely useful organometallic compounds in the field of organic chemistry. They exhibit strong nucleophilic qualities and also have the ability to form new carbon-carbon bonds. Therefore, they display qualities that are also exhibited by organolithium reagents and the two reagents are considered similar.When the alkyl group attached to a Grignard reagent is replaced by an amido group, the resulting compound is called a Hauser base. These compounds are even more nucleophilic that their Grignard counterparts.Grignard reagents are known for their ability to quickly target carbonyls at their carbon level. Grignard reagents do not, however, function in the presence of protic solvents. Instead of reacting with the desired molecule, the Grignard is so unstable that it can readily accept a proton from a protic solvent. The Grignard then is inert and there is no reaction to the desired molecule. A Grignard reagent is an organomagnesium compound which can be described by the chemical formula ‘R-Mg-X’ where R refers to an alkyl or aryl group and X refers to a halogen. Preparation of Grignard Reagents The process of preparing Grignard reagents is described in the points provided below. It can be noted that many of these reagents can also be purchased commercially.These reagents are prepared via the treatment of magnesium with organic halides such as alkyl or aryl halides. This is done with the help of solvents comprising ethers (which are described by the formula R-O-R’) because the ligands provided by these solvents help in the stabilization of the organomagnesium compound. Water and air are very harmful to this synthesis and can quickly destroy the Grignard reagent which is being formed via protonolysis or via oxidation of the reagent. Therefore, the process must be carried out in air-free conditions. Alternatively, the magnesium can be activated to make it consume water when wet solvents are used with the help of ultrasound. After the slow induction period of the reaction, the process can be quite exothermic. This is a very important factor to consider while industrially producing the Grignard reagent. The organic halides used in these reactions include aryl or alkyl chlorides, bromides, and iodides. Aryl fluorides and alkyl fluorides are not very reactive and are hence not commonly used. However, with the help of Rieke metals, the magnesium can be activated to make the fluoride more reactive. Reactions of Grignard ReagentsDuring a reaction involving Grignard reagents, it is necessary to ensure that no water is present which would otherwise cause the reagent to decompose rapidly. Therefore, the majority of Grignard reactions occur in solvents such as anhydrous diethyl ether or tetrahydrofuran because the oxygen in these solvents stabilizes the magnesium reagent.Grignard reagents are very important reagents in organic chemistry since they can be reacted with a wide range of compounds to form different products. Some of these reactions of these reagents are listed below.1. Reactions with Carbonyl Group These reagents form various products when reacted with different carbonyl compounds. The most common reaction of Grignard reagents is the alkylation of ketones and aldehydes with the help of R-Mg-X. 2. Reactions with Non- Carbon ElectrophilesFor the formation of new carbon-heteroatom bonds, Grignard reagents and some organolithium compounds are very useful. These reagents can also undergo a transmetallation reaction with cadmium chloride, yielding dialkyl cadmium. This reaction can be written as follows.2R-Mg-X + CdCl2 → R2Cd + 2Mg(X)ClAlkyl chains can be attached to many metals and metalloids with the help of these reagents.3. Reactions with Organic HalidesTypically, these reagents are quite unreactive towards organic halides which highly contrasts their behaviour towards other halides. However, carbon-carbon coupling reactions occur with Grignard reagents acting as a reactant when a metal catalyst is introduced.An example of such a coupling reaction is the reaction between methyl p-chlorobenzoate and nonyl magnesium bromide which yields the compound p-nonyl benzoic acid in the presence of the catalyst – Tris(acetylaceto) iron(III).4. Reaction between Acetone and Methyl Magnesium ChlorideThe reaction of methyl magnesium bromide with acetone followed by hydrolysis gives tertiary alcohol. Acetone reacts with methyl magnesium bromide followed by hydrolysis to give secondary alcohols..* Alkyl hydrogen atoms bonded to a carbon atom in a (alpha) position relative to a carbonyl group display unusual acidity. While the pKa values for alkyl C-H bonds is typically on the order of 40- 50, pKa values for these alpha hydrogens is more on the order of 19-20. This can most easily be explained by resonance stabilization of the product carbanionIn the presence of a proton source, the product can either revert back into the starting ketone or aldehyde or can form a new product, the enol. The equilibrium reaction between the ketone or aldehyde and the enol form is commonly referred to as "keto-enol tautomerism". The ketone or aldehyde is generally strongly favored in this reaction.Because carbonyl groups are sp2 hybridized the carbon and oxygen both have unhybridized p orbitals which can overlap to form the C=O π bond. The presence of these overlapping p orbitals gives α hydrogens (Hydrogens on carbons adjacent to carbonyls) special properties. In particular, α hydrogens are weakly acidic because the conjugate base, called an enolate, is stabilized though conjugation with the π orbitals of the carbonyl. The effect of the carbonyl is seen when comparing the pKa for the α hydrogens of aldehydes (~16-18), ketones (~19-21), and esters (~23-25) to the pKa of an alkane (~50). Of the two resonance structures of the enolate ion the one which places the negative charge on the oxygen is the most stable. This is because the negative change will be better stabilized by the greater electronegativity of the oxygen.* Mutarotation is a change in the optical rotation of a solution due to a change in the equilibrium between alpha (ɑ) and beta (β) anomers, upon dissolution in the aqueous solution.The process is also known as anomerization. Mutarotation is the change in specific rotation of a chiral compound due to epimerization. The term is most commonly used in carbohydrate chemistry.eg: The monosaccharide D- glucose exists in two cyclic forms, α-D-glucose ([α]D25 = +112) and β-D-glucose ([α]D25 = +18.7), which are epimers and are available as pure compounds. When one of the cyclic forms of D- glucose is added to water, it undergoes reversible epimerization to the other via the open-chain form, during which the specific rotation of the solution changes gradually until it reaches the equilibrium value +52.7º.* Epimerization is a process in which the configuration of one chiral center changes. The two are then called diastereomers of each other.* Amino Acids are the organic compounds that combine to form proteins, hence they are referred to as the building components of proteins. These biomolecules are involved in several biological and chemical functions in a human body and are the necessary ingredients for the growth and development of human beings. There are about 300 amino acids that occur in nature.” Amino acids are organic compounds containing the basic amino groups (-NH2) and carboxyl groups (-COOH). The ingredients present in proteins are of amino acids. Both peptides and proteins are long chains of amino acids. Altogether, there are twenty amino acids, which are involved in the construction of proteins. General properties of Amino acids They have a very high melting and boiling point. Amino acids are white crystalline solid substances.In taste, few Amino acids are sweet, tasteless, and bitter.Most of the amino acids are soluble in water and are insoluble in organic solvents.Essential and Non- essential Amino acidsOut of 20 amino acids, our body can easily synthesize a few on its own and are called non-essential amino acids. They include alanine, asparagine, arginine, aspartic acid, glutamic acid, cysteine, glutamine, proline, glycine, serine, and tyrosine.Apart from these, there are other nine amino acids, which are very much essential as they cannot be synthesized by our body. They are called as essential amino acids, and they include Isoleucine, histidine, lysine, leucine, phenylalanine, tryptophan, methionine, threonine, and valineIn cells, DNA (Deoxyribonucleic acid) is the nucleic acid that functions as the original blueprint for the synthesis of proteins. DNA contains the sugar deoxyribose, phosphates and a unique sequence of the nitrogenous bases adenine (A), guanine (G), cytosine (C) and thymine (T). The DNA molecules contain instructions a living entity requires to grow, develop and reproduce. These instructions are present inside each cell and are inherited from the parents to their offsprings.It is made up of nucleotides which contain nitrogenous group, a phosphate group, and a sugar group. The order of the nitrogenous bases – thymine(T), guanine(G), cytosine(C), and adenine(A), is crucial in determining the genetic code.Genes are formed by the order of the nitrogenous bases present in the DNA which is crucial for protein synthesis. The RNA is another nucleic acid that translates genetic information into proteins from DNA.The nucleotides are linked together for the formation of two long strands which spiral to produce a structure known as the double-helix which resembles that of a ladder wherein the sugar and phosphate molecules form the sides while the rungs are formed by the bases.The bases located on one strand pair up with the bases on the other strand, as in – guanine pairs with cytosine and adenine pairs with thymine.The DNA molecules are extremely long and hence without the right packaging, they cannot fit into cells. Thus, DNA is tightly coiled to produce formations referred to as chromosomes. Every chromosome has a single DNA molecule. In humans, there are 23 pairs of chromosomes that are present within the nucleus of the cells*Ribonucleic acid (RNA) is a nucleic acid which is directly involved in protein synthesis. Ribonucleic acid is an important nucleotide with long chains of nucleic acid present in all living cells. Its main role is to act as a messenger conveying instructions from DNA for controlling the proteins synthesis.RNA contains the sugar ribose, phosphates, and the nitrogenous bases adenine (A), guanine (G), cytosine (C), and uracil (U). DNA and RNA share the nitrogenous bases A, G, and C. Thymine is usually only present in DNA and uracil is usually only present in RNA.* Dyes are the chemical substances used to impart colour to fabrics, foods, and other objects for their beautification and distinction. They are capable of getting fixed to the fabrics/objects permanently and are resistant to the action of water, soap, light, acid and alkalies. Acid Dyes- These are azo dyes and are characterized by the salts of sulphonic or carboxylic acids. These are usually applied to wool, silk and nylon and have no affinity for cotton. Example- Orange I, Orange II, Methyl Orange, Martius Yellow and Naphthol Yellow.Basic Dyes- These dyes contain Amino group in unsubstituted (-NH2) or Substituted form (-NR2) as chromophore (colour bearing group) or auxochrome (colour enhancing group). These form water-soluble cations in an acid solution which then react with anionic sites present on the fabrics and thus get attached to them. These are used to dye modified nylons, polyesters, paper, leather, wool, cotton etc. Example- Aniline Yellow and Malachite Green.Direct Dyes- These also belong to the class of azo dyes and are used to dye the fabrics directly by placing it in an aqueous solution of the dye. These are suitable for those fabrics which can form H- bonds with the dyes. These are used to dye wool, silk, nylon, rayon and cotton. Example- Martius Yellow and Congo Red. Disperse Dyes- These are water-insoluble dyes which are dispersed in reagents like Phenol, Cresol etc. before applying to synthetic fibres. These are used to dye nylon, polyesters and polyacrylonitrile. Example- Celliton Fast Pink B and Celliton Fast Blue B.Fibre Reactive Dyes- These dyes contain a reactive group which combines directly with the hydroxyl or Amino group of the fibre. Because of the irreversible chemical reaction, the colour is fast and has a long life. These are used to dye nylon, wool and silk.Insoluble Azo Dyes (Ingrain Dyes)- These dyes are directly synthesized on the surface of the fibre. The fabric to be coloured is soaked in an alkaline solution of Phenol or Naphthol and is then treated with a solution of diazotised amine to produce azo dye on the surface of the fabric. The colour imparted by such dyes is not very fast. These are used to dye nylon, cotton, silk, polyester etc. Example- Nitroaniline red.* A heterocyclic compound has at least two different elements as a member of its ring.The most common hetero atoms found on a cyclic ring are Oxygen (O), Nitrogen (N) and Sulphur (S).Example:Nucleic Acid, present in the body responsible for storing and expressing genetic information, is an example of a Heterocyclic compound.Essential micronutrient, Vitamins is also an example of a heterocyclic compound.The majority of drugs, pesticides, dyes, and plastics are examples of heterocyclic compounds.Classification of Heterocyclic CompoundBased on the electronic arrangement, we can classify Heterocyclic compounds into two types:Aliphatic Heterocyclic CompoundAromatic Heterocyclic CompoundAliphatic Heterocyclic CompoundAliphatic heterocyclic compounds are those cyclic heterocycles that do not contain any double bond.The properties of aliphatic heterocyclic compounds are mainly affected due to ring strain.Examples of aliphatic heterocyclic compounds are Aziridine, Ethylene Oxide, Thiirane, Oxetane, Azetidine, Thietane, Tetrahydrofuran (THF), Dioxane, Pyrrolidine, Piperidine, etc.Aromatic Heterocyclic CompoundAromatic heterocyclic compounds, as the name suggests, are cyclic aromatic compounds.Aliphatic Heterocyclic compounds obey Huckels Rule, i.e.It should be cyclic.It should be planar.It should not contain any sp3 hybridised atoms.It must have (4n+2) 𝛑 electrons.Aromatic Heterocyclic compounds are analogous to Benzene.Examples: Furan, Pyrrole, Thiophene, Indole, Benzofuran, Carbazole, Quinoline, Isoquinoline, Imidazole, Oxazole, Pyrazole, Pyridazine, Pyrimidine, Purine, etc.* Preparation Methods By passing a mixture of acetylene and ammonia through a red-hot tube 2. By heating ammonium mucate with glycerol at 200 degrees. At this temperature, ammonium mucate is dissociated into mucic acid and ammonia. The acid then undergoes dehydration, Physical Properties of Pyrrole Pyrrole is colorless liquid, Boiling point 131°C, which rapidly turns brown on exposure to air. Its odour is like that of chIoroform. Pyrrole is sparingly soluble in water but dissolves in ethanol and ether Chemical Properties of Pyrrole Basic Character: Pyrrole reacts with dilute hydrochloric acid to give a crystalline hydrochloride. Acidic Character Pyrrole is not only a weak base but also a very weak acid. This is shown by its reactions with potassium hydroxide and Grignard reagents. Electrophilic Substitution ReactionsPyrrole undergoes electrophilic substitution reactions at C-2 because three resonance forms can be written for the intermediate obtained from attack at C-2, whereas only two such forms are possible for substitution at C-3. Consequently the C-2 intermediate is more stable and the product with a substituent at C-2 predominates. Substitution at C- 3 occurs only when both the 2-positions (that is, α and α') are blocked decarboxylation and ring-closure by reaction with ammonia.* Preparation Methods By dry-distillation of mucic acid and heating the product, furoic acid (furan-2-carboxylic acid), at 200-300°C.By oxidation of furfural with potassium dichromate to give furoic acid and subsequent decarboxylation at 200-300°C. By decarbonylation of furfural in steam in the presence of silver oxide catalyst (Commercial Method of Preparation). By dehydration of succinic dialdehyde by heating with P2O5 or ZnCl2.Physical properties of Furan Furan is a colourless liquid, boiling point 32C, with a chloroform like smell. It is only slightly soluble in water, but dissolves in most organic solvents. Chemical properties of Furan Furan is the most reactive of all 5-membered heterocycles.. Basic Character: Furan is a weak base like pyrrole. It forms unstable salts with mineral acids. These salts may either polymerize to produce a brown resin or undergo hydrolysis to yield succindialdehyde. 2. Electrophilic Substitution Like pyrrole, it undergoes electrophilic substitution at C-2. Substitution at C-3 occurs only when both of the C-2 positions (α and ά) are already blocked. Reduction: Furan is reduced by hydrogen in the presence of nickel to produce tetrahydrofuraN *Preparation Methods By passing a mixture of acetylene and hydrogen cyanide through a red- hot tube. By dehydrogenation of piperidine with concentrated sulphuric acid at 300°C or with nitrobenzene at 260°C. By heating tetrahydrofurfuryl alcohol with ammonia in the presence of aluminium oxide at 500°C. (Commercial Method of Preparation). Physical properties of Pyridine Pyridine is a colourless liquid, bp 115C°. It has a very characteristic pungent and disgusting odour. Pyridine is miscible with water and most organic solvents. Almost all classes of organic compounds are soluble in pyridine, even many of the high melting solids which scarcely dissolve in solvents such as ethanol and benzene. It is consequently used as a solvent.It is very hygroscopic. Chemical properties of Pyridine Basic Character: Pyridine behaves as a base. It reacts with acids to form fairly stable salts.. Electrophilic Substitution: Pyridine, however, does undergo electrophilic substitution reactions when extremely vigorous reaction conditions are used. Substitution occurs almost exclusively at C-3 (β-Position). Pyridine does not undergo Friedel-Crafts acylation and alkylation. This is because the Lewis acids (e.g., AlCl3) which are used as catalysts in these reactions coordinate with the lone pair of electrons on nitrogen. Nucleophilic Substitution: Pyridine undergoes nucleophilic substitution reactions mainly at C-2 (or at C-4 if C-2 is blocked) Reduction: Pyridine undergoes reduction with lithium aluminium hydride (LIAIH4), or hydrogen in the preSence of nickel catalyst to form piperidine. Oxidation: Like benzene, pyridine is quite stable towards mild oxidizing agents. It does not react with chromic acid or nitric acid. However, it may be oxidized by peracetic acid to give pyridine-N-oxide. *Preparation Methods By passing a mixture of acetylene and hydrogen sulphide through a tube containing aluminium oxide at 400°C. By heating sodium succinate with phosphorous trisulplside By the high-temperature (650 C) reaction of sulphur with butane. (Commercial Method of Preparation). Physical properties of Thiophene Thiophene is a colourless liquid, boiling point 84 C, with an odour very similar to that of benzene. It is insoluble in water, but miscible with most organic solvents. Chemical properties of Thiophene Thiophene is 300 times more reactive than benzene. Thiophene does not show any basic properties. It is much more stable to acids than either pyrrole or furan. ThiopheneMdoes not undergo the Diels-Alder reaction. Electrophilic Substitutions: Thiophene, like furan and pyrrole, undergoes electrophilic substitution reactions primarily at C-2. Substitution at C-3 occurs only when both of the 2-positions (α and ά) are already occupied. Electrophilic Substitution Reduction: Thiophene may be hydrogenated by means of sodium amalgam and ethanol to tetrahydrothiophene. Desulphurisation: Catalytic reduction of Thiophene with Raney Nickel results in the removal of Sulphur to form n- butane*Acid value is defined as the amount of KOH needed in milligrams to neutralize the organic acid which is present in 1 gram of fat. It is used to measure the free fatty acid (FFA) that are present in the fat or oil.Saponification value is defined as the amount of KOH (potassium hydroxide) required in milligrams to to turn 1 gram of fat into soap. It depends on the nature of the fatty acids that are contained in the fat. The iodine value is the number which expresses in grams the quantity of Iodine, which isabsorbed by 100 g of the substance. The iodine value indicates the degree of unsaturation of a fat or oil. It is defined as the number of grams of iodine absorbed by 100 g of fat.