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Brain Pointer Xii
Brain Pointer Xii
BRAIN POINTER
Class - XII
PHYSICS,
CHEMISTRY,
BIOLOGY
Brilliant
STUDY CENTRE
PALA
www.brilliantpala.org
email: brilliantstudycentre@gmail.com
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Brilliant STUDY CENTRE
Page 2
Blank
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CONTENTS
PHYSICS
1. Electrostatics ------------------------------------------------------------------------------------------------------------ 05
2. Current Electricity ---------------------------------------------------------------------------------------------------- 38
3. Moving Charges and Magnetism ---------------------------------------------------------------------------- 63
4. Magnetism and Matter -------------------------------------------------------------------------------------------- 70
5. Electromagnetic Induction and Alternating Current ------------------------------------------- 75
6. Electromagnetic Waves ------------------------------------------------------------------------------------------- 82
7. Ray Optics & Optical Instruments -------------------------------------------------------------------------- 86
8. Wave Optics ------------------------------------------------------------------------------------------------------------- 100
9. Dual Nature of Matter and Radiation ------------------------------------------------------------------ 104
10. Atoms and Nuclei ---------------------------------------------------------------------------------------------------- 109
11. Semiconductor Electronics ------------------------------------------------------------------------------------ 119
12. Transistors -------------------------------------------------------------------------------------------------------------- 125
CHEMISTRY
1. The Solid State -------------------------------------------------------------------------------------------------------- 133
2. Solutions ------------------------------------------------------------------------------------------------------------------ 140
3. Electrochemistry ----------------------------------------------------------------------------------------------------- 147
4. Chemical Kinetics --------------------------------------------------------------------------------------------------- 155
5. Surface Chemistry -------------------------------------------------------------------------------------------------- 162
6. General principles and Processes of Isolation of Elements ------------------------------ 174
7. The p Block Elements (Class XII) --------------------------------------------------------------------------- 178
8. The d and f Block Elements ------------------------------------------------------------------------------------ 191
9. Coordination Compounds -------------------------------------------------------------------------------------- 195
10. Halo Alkanes and Halo Arenes ------------------------------------------------------------------------------ 201
11. Alcohols, Phenols and Ethers -------------------------------------------------------------------------------- 210
12. Aldehydes and Ketones ------------------------------------------------------------------------------------------ 223
13. Carboxylic Acids ----------------------------------------------------------------------------------------------------- 228
14. Nitrogen Compounds ---------------------------------------------------------------------------------------------- 235
15. Biomolecules ----------------------------------------------------------------------------------------------------------- 245
16. Polymers ------------------------------------------------------------------------------------------------------------------ 255
17. Chemistry in Everyday Life ----------------------------------------------------------------------------------- 264
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CONTENTS
BOTANY
1. Reproduction in Organisms ------------------------------------------------------------------------------ 267
ZOOLOGY
1. Human Reproduction ----------------------------------------------------------------------------------------- 321
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PHYSICS
CHAPTER - 01
ELECTROSTATICS - I
ELECTRIC CHARGE
The intrinsic property of matter which is responsible for electrical
and magnetic effects.
q1 q2
1 q1q2 r
F0
40 r 2
0 Permittivity free space 8.85 1012 C2 / Nm2
1
9 109 Nm2 / c 2 (SI)
40
q1q2
F0 9 109
r2
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Coulomb’s law in a dielectric medium of dielectric constant K
1 q1q2 F0 K 1
Fm Fm
40K r 2 K Fm F0
q1q2
F 2
n
4 0 k i t
i1
Equilibrium of charges
Let ‘P’ is a point on the line joining two charge q1 and q2 where the net
force on a third charge ‘q’ is zero. Assume q1 q2 . ‘x’ is the position
of ‘p’ from q1
Point
x
r P
x A
q2
1
q1 q1 q q2
r
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r P A B
x
q2 q q1 q2
1
q1 x r
T sin F
T cos mg
At equilibrium F mg tan
ELECTRIC FIELD
Electric field is the force per unit positive charge
F
E Lt
q0 0 q
0
Newton / coulomb Nc 1
SI units
Volt / meter Vm1
`
Dyne / Stat coulomb : CGS unit
Dimensional formula E MLT3 A1
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Electric field due to a point charge
q0 1C
y
r̂ P
Q
Ep rˆ
40r 2 r
Q
1
Ep x
r2 O
z
Force on charge F qE
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For a positively charged body of mass ‘m’ and charge ‘q’ with initial
velocity zero ( = 0)
qEt
Velocity acquiredafter a time t,
m
1 1 q2E2 t 2
Kinetic energy acquired KE mv 2
2 2 m
If v is the electric potential applied to
1
accelerate the particle, then qv m2
2
2qv
m
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case (i) Electric field is horizontal
Fnet qE mg
2
qE
Net acceleration g g
1 2
m
T 2 1
qE 2 2
T 2 1 g2
g
m
qE
g1 g
m
T 2
qE g
m
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T 2
qE
g
m
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ELECTRIC DIPOLE
Dipolemoment P 2qa
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1 2p 1 p
Ep Ep
40 r 3 40 (r 2 a2 )3 2
1 p
For short dipole r >>a Ep
40 r 2
Electric field due to an electric dipole at any arbitrary point P (r, Q) for
a short dipole
p
Ep 1 3 cos2
40r 3
Torque acted on an electric dipole of dipolemoment p in a uniform
electric field E
p E PE sin , is the angle between dipolemoment and
electric field.
dE dE
F p , where is the spectial change in electric field
dr dr
Electric flux E da , when area is non uniform
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For uniform area, flux E A
= EA ( o0 )
EA
0 ( 900 ) ( 1800 )
GAUSS LAW IN ELECTROSTATICS
The electric flux across any closed surface enclosing a net charge q
is
q
E da
0
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1
0 d (linear ch arg e enclosed)
1
0 dA (surface ch arg e enclosed)
A
1
0 dv (volume ch arg e enclosed
1 2
Ep rˆ
40 r
Ep r
2 0
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Electric field due to multiple charged thin sheets
R
For r>R (outside point) Ep r
0r
R
(r= R) (surface) Ep r
0r
r <R (inside point) Ep 0
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R 2
For r>R , Ep =
2 0r
R
For r + R, Ep = 20
r
For r <R Ep = 2
0
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2
P outwards
20
4T 2
At equlibrium , T surface tension
r 2 0
q = 8 r 2 0rT
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ELECTROSTATICS -II
Electric potential due to a point-charge “Q” at a distance r
Q
Vp
40rp
Q 1 1
VPQ VP VQ
40 rP rQ
qQ
Up qVp
40rp
qQ 1 1
UpQ qV Up UQ
4 0 rp rQ
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1 q1 q2 q
VP ...... n
40 r1 r2 rn
n
1 qi
VP
4o i1 ri
Q
VP
40 r2 r1
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Potential energy of a two charge system
1 q1 q2
U
40 r1 2
1 q1q2 q2q3 q3 q1
U
40 r1 2 723 r3 1
1 1 n qij
U
2 40
i1 rij
j i
i j
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1 P cos
Vp
40 r 2 a2 cos2
For short dipole r a
case(i)on axial po int ( 0o )
1 P
Vp
4o r 2
Case(ii)on equatorial po int ( 90o )
VP o0
Case(iii) on any arbitrory point ( )
1 P cos
Vp
40 r2
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rB
V VB VA E dr
rA
rB
VB E dr
whereVA o
asrA
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r
V E dr
r - position vector of point
dv
E
dr
In rectangular components
dv
Ex
dx
dv
Ey
dy
dv
Ez
dz
B
VB VA E dl
A
B
(using line integral)
VB E dl
VB VA AB
E x
VA VB E BA
E x
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Potential difference between two points due to an infinitely charged
wire
rA
VB VA In
2 0 rB
VB VA (rA rB )
20
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Q
Vp
4 0 R2 r 2
Q
V0
40R
Whenr R
Q
Vp
40r
2 2
Vp R r r
2 0
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Potential due to a charged non conducting sphere
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3 Q2
Usphere
5 40R
1 Q2
Ushell
2 40R
w U PE (cos 1 cos 2 )
U P E PE cos
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U = –PE U = PE
(Stable equilibrium) (unstable equlibrium)
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Uniqueness Theorem
1 R
or 1 2
R 2 R1
C= q q charge on conductor
V
V Voltage across the conductor
C Capacitance
Unit of capacitance : Farad (F)
Dimensional Formula : [C] = [M-1 L-2 T4 A2]
Energy stored in a capacitor
1 2 qv q2
U cv
2 2 2c
1 1 1 1
.............
Ceff C1 C 2 Cn
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1 C
If n capacitors are identical Ceff n
1 1 1
V1 V2: :................... : Vn : : .............:
C1 C2 Cn
Ceff C1 C2 C3 .............Cn
Ceff nC
Q1 : Q2 :........... : Qn C1 : C2 :............. : Cn
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C1V1 C2 V2
Common potential across eacg capacitor V C1 C2
1 CC
Loss of electrical energy U 2 C C (V1 V2 )
1 2 2
1 2
1
Energy density of parallel plate capacitor U 0E2 E Electric
2
field between the plates
If ‘n’ dielectric media each having dielectric constants K1, K2, K3 ........Kn
and respective thickness t1, t2, t3, .......tn are placed between the plates,
such that d = t1 + t2 + .......... + tn, then effective capacitance
A 0 A0
C
n
ti t1 t 2 t
i 1 Ki
K1 K 2
.......... n
Kn
A 0
C
t
(d t)
K
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A 0
C
(d t)
K 1 A1 0 K 2 A 2 0 K n A n 0
Ceff .......
d d d
n
C 0
d
K A
i1
i i
1
Induced charge on the periphery of dielectric medium Q Q [1
1
]
K
where Q charge on capacitor plates
K dielectric constant
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Electric charge Q KQ Q
Capacitance C KC KC
V
Voltage V V
K
E
Electric field E E
K
U
Potential energy U KU K
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CHAPTER - 02
CURRENT ELECTRICITY
Electric Current
q dq
I (charge flow uniform) i (charge flow non uniform)
t dt
q I t tf
dq idt q idt
ti
I
J neVd
A
Mobility
Vd e
E m
Ohm’s Law
VI or V IR
Resistance of a conductor
m
R
A ne 2
Conductance Conductivity
1 1
G=
R
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Resistance
On stretching wire
2 V
R 2
A V A
on stretching V remains constant
1 1
R 2 or R A 2 R r 4
Percentage change in resistance
R
2
R If change in length or area is less than or equal to 5%
R A
2
R A
R R 2 R 1 1
R 2 , R
R R1 A2
R 2 1
2 2
1
2
R
2 2
1 1
R A2 A1 If change in length or area > 5%
2
R 1
A1
t 0 1 t 0 resistivity at 0o C
t resistivity at t o C
temperature co-efficient of resistivity
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Temperature co-efficient of resistance
R 2 R1
R1 Resistance at t10 C
R 1 t 2 t1
R 2 Resistance at t 02 C
(anyone temperature is 0o C )
R 2 R1
t1 0 , t 2 0
R 1 t 2 R 2 t1
Colour Figure
Black 0
Brown 1
Red 2
Orange 3
Yellow 4
Green 5
Blue 6
Violet 7
Grey 8
White 9
Colour Tolerance
Gold 5%
Silver 10%
No colour 20%
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R eq R 1 R 2
n
R eq R i
i 1
R eq nR
v
and potential difference across each resistance V
n
Sum of the voltages across all resistance is equal to the voltage
applied across circuit i.e. V V1 V2
1 1 1
The effective conductance G is,
G G1 G 2
V
The current I in the circuit, I
R1 R 2
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V1 R1
In case of resistances in series,
V2 R 2 as the current through
each resistor is same
In series combination of resistors
i) Amount of current flowing through each resistor is same
ii) Potential difference across each resistor is directly proportional to
the value of resistance
iii) The value of equivalent resistance of the combination is greater
than the higher value of resistance in series combination
For resistances in parallel,
1 1 1
R eq R1 R 2
1 1 1 1
...
R eq R1 R 2 Rn
R I
R eq and current through each resistance I
1
n n
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i.e. I I1 I2
The effective conductance of parallel combination
G G1 G 2
R 1R 2 Multiplication
If two resistances are in parallel, R eq
R1 R 2 Addition
R1R 2
The p.d. across the circuit, v I.R eq I
R1 R 2
By current division rule,
Current through any resistance
I = main current
So, current flows through resistance R1,
V I.R eq I R 1R 2 R2
I1 I
R1 R1 R1 R1 R 2 R1 R 2
and current flows through resistance R2,
V I.R eq I R1R 2 R1
I2 I
R2 R2 R 2 R1 R 2 R1 R 2
I1 R 2
In case of resistance in parallel,
I2 R1
If three resistances are connected in parallel,
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R 1R 2 R 3
or R eq
R 1R 2 R 2 R 3 R 2 R 1
In parallel combination of resistors,
i) Potential difference across each resistor is same
ii) Current through any resistance is inversely proportional to its
resistance i.e. V = IR = constant
1
or I
R
iii) The value of equivalent resistance of this combination of
resistances is less than the lowest value of the resistances connected
in parallel.
If we have ‘n’ identical conductors, each of equal resistance, then
the number of combination, we can have using all at a time is 2n 1
If we have ‘n’ different conductors, then the number of possible
combinations are 2 n
If n identical resistances are first connected in series and then in
Rp n2
parallel, the ratio of the equivalent resistance is given by
Rs 1
If equivalent resistance of R1 and R2 in series and parallel be Rs and
Rp respectively then
1
R1 R s R s2 4R s R p
2
1
and R 2 R s R s2 4R s R p
2
If a wire of resistance R, cut in ‘n’ equal parts and then these parts
are connected to form a bundle then equivalent resistance of
R
combination will be
n2
For equivalent resistance of infinite network of resistances
1 1 1/2
R1 R 2 R1 R 2 4R 3 R1 R 2
2
R AB
2 2
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1 R
R AB R1 1 1 4 2
2 R1
3
R 13 r
4
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iii) Resistance across main diagonal
5
R 17 r
6
1
r , A - area of electrodes
A
r C , C - concentration of electrolyte
1
r , T - temperature of electrolyte
T
E
Current I
rR
E IR Ir
v Ir
or v E Ir,
When cell getting charged current inside the cell from anode to
cathode
VE
Current, I
r
In open circuit R
E
I 0
Rr
In short circuit R = 0
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E E
I and V IR 0
Rr r
R R1
E I1I 2 2
I1 I 2
I2 R 2 I1R1
Internal resistance of the cell used, r
I1 I 2
Cells in series
i) In series grouping of cells their emfs are additive or subtractive
while their internal resistances are always additive
E eq E1 E 2
req r1 r2
E eq E1 E 2 E1 E 2
req r1 r2
= E1 E 2 .... E n
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iii) Current in each cell is the same and is equal to the main current
iv) Total internal resistance of battery = Sum of the individual internal
resistance
r r1 r2 ..... rn
v) Let n cells each of emf E and internal resistance ‘r’ are connected
in series with ‘R’
Total emf = nE
Total resistance = R + nr
nE
Main current I
R nr
E
vi) If nr > > R, I i.e. current from any cell when short circuited
r
nE
vii) If nr < < R, I i.e. n times the current due to one cell
R
2
nE
viii) power dissipated in the external circuit = R
R nr
E2
P
ix) condition for max. power, R = nr, and max n 4r
If ‘n’ cells each of emf E and internal resistance ‘r’ are connected in
series and by mistake ‘m’ cells are wrongly connected to an external
resistance R, then
n 2m E
current through the circuit, I
R nr
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Cells in parallel
1 n
total internal resistance r r
eq
r
req
n
the current through the external resistance, is
E nE
I
r r nR
R
n
nE
5) If r > > R, then I n current due to single cell
r
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E
6) If r < < R, then I = current due to single cell
R
2
E
P R
7) Power dissipated in the circuit r
R
n
r E2
8) Condition for max. power is, R and Pmax n
n 4r
E1r2 E 2 r1
Equivalent emf, E eq
r1 r2
r1r2
Equivalent internal resistance req
r1 r2
E1r2 E 2 r1
Main current I
r1r2 R r1 r2
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If V is the potential difference across R, then
E1 V E1 IR
I1
r1 r1
E 2 V E 2 IR
I2
r2 r2
E1r2 E 2 r1
E eq
r1 r2
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I1 I2 I3 I 4 I5 0
I1 I3 I2 I 4 I5
IR E 0
VD = VB
P R
I1P I 2 R and I1Q I 2S
Q S
P R
If then VB VD and current will flow from B to D
Q S
P R
If then VB VD and current will flow from D to B
Q S
PQ R S P Q RS G P Q R S
R AB
G P Q R S P R Q S
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2PQ G P Q
R AB
2G P Q
P R
At balanced condition
Q S
R
100 S
S
100 R
X
R 100
2) If two unknown resistances are connected in series in the left gap
and balancing length is s then
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x1 x 2 s 1 2
R 100 s 100 1 100 2
3) If two unknown resistance are connected in parallel in the left gap
and balancing length is p , then
x1 x 2
xp x1 x 2 p
R R 100 p
Potentiometre
(1) Potential difference (or fall in potential) per unit length of the wire
V
i.e. x
L
e
where V iR .R
R Rh r
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V iR i e R
So, x .
L L A R Rh r L
V iR
(2) In balanced condition, E x , E x
L L
e R
.
R Rh r L
x1 L 2 2
If V is constant then L ,
x 2 L1 1
3) Standardisation
Process determining potential gradient experimentally.
E0
x
0
4) Sensitivity
Sensitivity is assessed by its potential gradient
Sensitivity is inversely proportional to the potential gradient
To increase sensitivity length of potentiometre wire increases
Applications of potentiometre
1) comparison of emfs of two cells
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r 1 2 R
2
R 2 2 1
R1 1
P I2 R
V2
P
R
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Electric energy is defined as the total electric workdone or energy
supplied by the source of emf in maintaining the current in an electric
circuit for a given time
Electric energy = electric power time
= P t
Expression for electric energy
V2
Electric energy = Pt VIt I Rt
2
t
R
SI unit of electric energy is joule
1 joule = 1 Watt 1 second
H I 2 Rt (in joules)
I2 Rt
or H (in Calories)
J
Where J is Joule’s mechanical equivalent of heat (= 4.2 J/cal)
W VIt I2 Rt v2 t
H cal
J 4.2 4.2 4.2R
Maximum power theorem - States that the output power of a source
of emf is maximum, when external resistance in the circuit is equal
to the internal resistance of source i.e. R = r
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E
If E is the applied emf of the source, then I
Rr
At the max. output power, R = r
E E
So, I
r r 2r
E2
and max. output power, Pmax I r
2
4r
output power P0 VI V
Efficiency of a source of emf,
input power Pi EI E
Where, V - potential drop across the external resistance R
E - emf of the source of current
Long distance power transmission - When power is transmitted
through a power line of resistance R, power loss will be I 2 R
If the power is transmitted at voltage V then P VI
P
ie I
V
P2
So, power loss = 2 R
V
Now as for a given power and line P and R are constant so power
1
loss
v2
Long distance power transmission is carried out high voltage
Series combination of bulbs - Current through each bulb will be
same. Now because resistance of lowest wattage bulb is maximum,
hence heat produced I Rt will be maximum in lowest wattage
2
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1 1 1
Ptotal P1 P2
1
Pconsumed (Brightness) V R
Prated
hence heat produced V t / R (or brightness) will be maximum in
2
Ttotal P1 P2
1
Pconsumed (brightness) PR i
R
A fuse wire is generally prepared from tin-lead alloy (63% tin + 37%
lead). A fuse wire should have high resistance and low melting point
The length of fuse wire is immaterial
The safe current in a fuse wire is directly proportional to the (3/2)
power of radius of the wire i.e. I r 3/2
62
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CHAPTER - 03
MOVING CHARGES & MAGNETISM
0 I d r
dB
4 r3
0 I
B sin 1 sin 2
4r
0 I sin
If 1 2 , B
2r
0I
B
2r
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2. Magnetic field due to a circular coil carrying current
At any point on the axis of the coil
0 2nIr 2
Baxial
4 x 2 r 2 3/ 2
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0 nI
B cos 1 cos 2
2
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Case II : Inside the conductor
0I
B r
2R 2
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qB
Frequency,
2m
If a charged particle moves with a velocity v making an angle with
the magnetic field.
Where 0o ,90o ,180o , it moves in helical path
mv sin
radius of helical path, r
qB
2mv cos
pitch of the helix
qB
Cyclotron
Maximum kinetic energy of the charge as it emerges from the
B2 q 2 R 2
cyclotron, K max
2m
qB
Cyclotron frequency, f
2m
Velocity Selector
Velocity of the charged particle to be undeflected
E
v
B
Magnetic force on a current carrying conductor,
F I B I = current
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Magnetic force betw een two parallel current carrying
conductors.....
0 I1I 2
Magnetic force per unit length of the conductor, F
2 d
mB
NI A B
NIABsin
N = Number of turns
A = Area enclosed by the current loop
B = Magnetic field intensity
I = Current through the coil
= Angle between A and B
Moving coil galvanometer
Current flowing through the galvanometer,
C
I
NAB
C = couple per unit twist
N = number of turns of the coils
A = area of the coil
B = magnetic field intensity
= angle of deflection of the coil
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NBA
Current sensitivity =
I C
NBA
Voltage sensitivity =
V CR
Conversion of a galvanometer into an ammeter
IS
Full scale deflection current I g
G S
Where I = maximum current to be measured
G = resistance of the galvanometer
S = shunt resistance
Ig G
S
I Ig
Conversion of a galvanometer into a voltmeter
High resistance to be connected in series to convert the galvanometer
into a voltmeter
V
R G
Ig
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Brilliant STUDY CENTRE
CHAPTER - 04
MAGNETISM AND MATTER
2 Magnetic length
Directed from south to north
Inverse square law
The magnetic force between two isolated magnetic poles of strength
m1 and m 2 lying at a distance ‘r’ is given by:
0 m1m 2
F
4 r 2
Magnetic field due to a bar magnet
a) At an axial point
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0 2Mr
Baxial
4 r 2 2 2
0 M
Beq
4 r 2 2 3/ 2
Beq
0 M
4 r 3
c) At any point
0 M
B 1 3cos 2
4 r 3
1
tan tan
2
angle between resultant field and direction of r .
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Torque on a dipole placed in a uniform magnetic field B is
MB
MBsin
Time period of oscillation of a dipole of dipole moment M placed in
a uniform magnetic field B is
I
T 2
MB
W MB cos 1 cos 2
Potential energy of a dipole of dipole moment M placed in a uniform
magnetic field B is
u M.B
u MB cos
Earth’s Magnetism
Declination is the angle between geographic meridian and magnetic
meridian at a point OR it is the angle between true north and north
shown by compass needle.
Dip OR Inclination (I)
Angle between net magnetic field of earth and horizontal direction
BH BE cos I
BV BE sin I
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BE B2H BV2
and
BV
tan I
BH
tan I
tan I1
cos
Angle of dip I at a plane is related to its magnetic latitude ' ' through
the relation
tan I 2 tan
Intensity of magnetisation (I)
M net V volume
I
V M net net dipole moment
Magnetic susceptibility
I
H
r 1
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Diamagnetic Materials
1) when placed in an external magnetic field, weakly repelled by the
field
2) 1 0
3) If 1 perfect diamagnet
4) is independent of temperature
Paramagnetic materials
1) when placed in an external magnetic field, weakly attracted by the
field
C
2)
T
Ferromagnetic materials
1) strongly attracted by the field
2) is very large and positive
3) above curie temperature ferromagnetic material behaves as a
paramagnet.
Magnetic Hysteresis
Retentivity OR remanence
Magnetic field remaining in the specimen when the magnetising field
is removed
Coercivity
Magnetic field required to destroy the remaining magnetism of the
specimen.
Hysteresis - loss
The area of B–H curve is a measure of energy dissipated per cycle
per unit volume.
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CHAPTER - 05
ELECTROMAGNETIC INDUCTION & AC
Synopsis
01. Magnetic flux. B.A BAcos , Where is the angle between B
and A
d
02. Faraday’s law, magnitude of induced emf , . For ‘N’ turns
dt
d
N
dt
N d
Induced current , i - where ‘R’ is the resistance of the coil.
R dt
Change in flux
Induced Charge, Q
Re sis tan ce
03. Lenz’s law is the direct consequence of the law of conservation of
d
energy. It gives the direction of the iduced emf .
dt
04. Motional e.m.f is, Bv
1 2
05. Rotational e.m.f is, B
2
di
06. The induced e.m.f. due to self induction is given by L
dt
0 N 2 A
07. Self inductance of a solenoid = L = 0 n A or L
2
Where N is the total number of turns.
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di
08. The induced e.m.f. due to mutual induction is given by M
dt
0 N p Ns A
09. Mutual iductance between a pair of coils is M
Where Np & Ns are the total number of turns in the primary and
secondary coils respectively.
1 2
12. Energy stored in a solenoid carrying current ‘I’ ampere is W LI
2
13. Mechanical and Electrical analogue
1) Velocity (v) Current (I)
2) Mass (m) Self inductance (L)
3) Displacement (s) Charge (q)
4) Force (F) Voltage ( )
1
5) Spring constant (k) Reciprocal of capacitance
C
6) Kinetic energy Magnetic energy stored in inductor
7) Friction Resistance
14. Magnetic energy density (energy stored per unit volume) in a solenoid
B2
=
2 0
15. If mutual induction between the coils is ignored, the effective self
inductance in series combination is, L
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16. If mutual induction between the coils is considered, the effective self
inductance in series combination is ,
L L1 L 2 2M
L L1 L 2 2M
1 1 1
L L1 L 2
1 1 1 M
L L1 L 2 L1L 2
19. The force needed to move a conductor out from a uniform magnetic
field
B2 2 v
F BI
R
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20. The power needed to move a conductor out from a uniform magnetic
field
B2 2 v 2
P
R
Alternating Current
BAN
22. Peak emf , m BAN and Peak current, i m
R
23. RMS value of emf and current are respectively
m i
rms 0.707 m and i rms m 0.707i m
2 2
24. The average value of emf / current in a positive half cycle are
2 2i
respectively av half and i av half
m m
1 2
25. The average value of power in a complete cycle = i m R i 2rms R
2
m
Now current in the inductor is i i m sin t where i m
2 L
Current lags behind the emf by
2
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Now current in the capacitor is i i m sin t where i m m
2 I
C
Current leads the emf by
2
1
30. Capacitive reactance X C
2f C
m
im
2
1
R 2 L
C
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1
L
tan 1 C
Phase difference ,
R
2
1
Impedence Z R L
2
C
1
34. i) At very low frequency L . Then tan ve or ve
C
1
ii) At very large frequency L . Then tan ve or ve
C
1
iii) At an intermediate frequency L . Then tan 0 or 0
C
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The current in the LCR circuit is i i m sin t . Now the circuit behaves
as a pure resistive circuit.
1 1
35. At resonance L ,
C LC
1
Resonant frequency f
2 LC
m
Current in the circuit at resonance is i m
max
0 L0
36. Q - factor of the LCR circuit is Q where 0 is the
2 R
resonant frequency.
L 1 1 L
Then Q
R LC R C
37. Average power in AC circuit is P rms i rms cos
38. Power consumed by a pure resistive circuit is rms rms P rms i rms
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CHAPTER - 06
ELECTROMAGNETIC WAVES
Maxwell’s Equations
q
1) E.ds
S 0
Gauss theorem in electrostatics
2) B.ds 0 Gauss theorem in magnetism
S
dB dB
, E.d
dt
3) e A
dt
Faraday’s law of electromagnetic induction
dE
4) B.d i
c
0 c i d 0i c 0 0 A
dt
Maxwell-Ampere law
c
E E 0 sin t x
B B sin t x
where, 2f
0 c
1 E
Speed of EM wave, C 0
0 0 B0
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cB 2 EB
S 0 cE 2
0 0
1 1 2 EB E B
= c 0 E 02 B 0 c = 0 0 rms rms
2 2 0 2 0 0
Energy u 0
Momentum, P
Velocity v
Energy per unit volume,
1
= 0 E 02 (in electric field)
2
1 B20
= (in magnetic field)
2 0
1 1 B02
Total energy = E
0 0
2
2 2 0
Electromagnetic spectrum
Range of wavelength (in m)
Radio waves 10 1 10 4
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X-rays 1011 10 8
Gamma rays 10 14 10 11
When a wave passes from one material to another, frequency remains
constant but the wavelength changes
0
where, 0 = wavelength in vacuum
n
n = refractive index
c
n v = speed of light in the material
v
Average energy density of electric field,
1
ue 0 E 02
4
Average energy density of magnetic field,
1 B02 B2
uB
4 0 2 0
Average energy density of EM wave
1 1 2
u EM 0 E 02 B0
2 2 0
B2rms
u EM 0 E 2
rms
0
Intensity of EM waves,
power 1 1 2
I 0 E 02 c B0 c
area 2 2 0
B2rms
I c 0 E 2rms c
0
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Radiation pressure
I
Prad for perfectly absorbing surface
C
2I
Prad for perfectly radiating surface
C
I S
or, Prad absorbing surface
C C
2I 2S
Prad reflecting surface
C C
where, I = intensity
S = Poynting vector
C = speed of light
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CHAPTER - 07
RAY OPTICS & OPTICAL INSTRUMENTS
(3) Images by two inclined plane mirrors : When two plane mirrors
are inclined to each other at an angle , then number of images (n)
formed of an object which is kept between them.
360 60
(i) n 1 ; If = even integer
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60
(ii) If = odd integer then there are two possibilities
(i) When the object moves with speed u towards (or away) from the
plane mirror then image also moves toward (or away) with speed u.
But relative speed of image w.r.t. object is 2u.
(ii) When mirror moves towards the stationary object with speed u,
the image will move with speed 2u.
Curved Mirror
Relation between f and R :
R
f
2
fconcave ve, f convex ve, f plane
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1 1 1
Mirror formula : ; (use sign convention while solving the
f v u
problems)
size of object
Magnification : m
size of image
Snell’s law
The ratio of sine of the angle of incidence to the angle of refraction (r)
is a constant called refractive index
sin i
i.e. (a constant). For two media, Snell’s law can be written
sin r
2 sin i
as 1 2
1 sin r
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Optical Path
It is defined as distance travelled by light in vacuum in the same time
in which it travels a given path length in a medium.
Real and Apparent Depth
If object and observer are situated in different medium then due to
refraction, object appears to be displaced from it’s real position. There
are two possible conditions
1
cos ecC ; where Rarer Denser
sin C
(iv) Field of vision of fish (or swimmer) : A fish (diver) inside the water
can see the whole world through a cone with.
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a) Apex angle = 2C = 98o
h
b) Radius of base r h tan C
2 1
h 2
c) Area of base A
2 1
Refraction from curved surface
u = Distance of object, v = Distance of image, R = Radius of curvature
2 1 2 1
Refraction formula : (use sign convention while
R v u
solving the problem)
Lens
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1 1 1
formula and it is 1
f R1 R 2
Lens in a liquid
f a g 1
f a g 1 (Lens is supposed to be made of glass)
1 1 1
(i) Lens formula : ; (use sign convention)
f u
(ii) Magnification : The ratio of the size of the image to the size of
object is called magnification.
I f f
(a) Transverse magnification : m (use sign
O u f u f
convention while solving the problem)
(10) Cutting of lens
(i) A symmetric lens is cut along optical axis in two equal parts. Intensity
of image formed by each part will be same as that of complete lens
(ii) A symmetric lens is cut along principle axis in two equal parts.
Intensity of image formed by each part will be less compared as that
1
of complete lens. (aperture of each part is times that of complete
2
lens)
In case when two thin lens are in contact :Combination will behave
as a lens, which have more power or lesser focal length.
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1 1 1 ff
F 1 2 and P P P
F f1 f 2 f1 f 2 1 2
(iv) When two lenses are placed co-axially at a distance d from each
other then equivalent focal length (F)
1 1 1 d
F f1 f 2 f1f 2 and P P1 P2 dP1P2
Silvering of lens
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A r1 r2 and i e A
sin i
For surface AC
sin r1
sin r2
For surface AB
sin e
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(ii) Dispersive power : 1
V R
y y
V R
where e y
2
It depends only upon the material of the prism i.e. and it doesn’t
depends upon angle of prism A
Scattering of Light
Molecules of a medium after absorbing incoming light radiations,
emits them in all direction. This phenomenon is called Scattering.
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(ii) Also called magnifying glass or reading lens
(iii) Magnification’s, when final image is formed at D and
i.e. m D and m
D D
m D 1 and m
f max f min
Da
If lens is kept at a distance a from the eye then m D 1 and
f
Da
m
f
(2) Compound microscope
(i) Consist of two converging lenses called objective and eye lens.
of A 'B ' from eye lens, f 0 = Focal length of objective, f e = Focal length
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of eye lens.
Magnification :
mD
0 D f0 D 0 f 0 1 D
1 1
u 0 fe u 0 f0 fe f0 fe
m
0 D
f 0 D 0 f0 D
u 0 Fe u 0 f 0 f e f0 Fe
u 0f0 fD
When final image is formed at D; L D 0 u e e
u 0 f0 fe D
uf fD
When final images is formed at ; L 0 f e e
0 0
u 0 f0 fe D
(Do not use sign convention while solving the problems)
(3) Resolving limit and resolving power : In reference to a
microscope, the minimum distance between two lines at which they
are just distinct is called Resolving limit (RL) and it’s reciprocal is
called Resolving power (RP)
2 sin 1
R.L. = and R.P. = R.P. R.P.
2 sin
= Half angle of the cone of light from the point object, sin =
Numerical aperture
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Telescope
f0 fe f0
(v) Magnification : m D 1 and m f
fe D e
feD
(vi) Length : L D f 0 u e f 0
f e D and L f 0 f e
(2) Terrestrial telescope
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f 0 fe f0
(iv) Magnification : m D 1 and m f
fe D e
feD
(v) Length : L D f 0 4f u e f 0 4f
f e D and L f 0 4f f e
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CHAPTER - 08
WAVE OPTICS
Wave front
Locus of points of same vibration. The phase difference between
two adjacent points in a wave front is zero
Types of wave fronts
2
2. Relation between phase difference and path difference L
Interferences - Superposition of waves
3. Amplitude of the resultant wave
i.e. I A1 A 2 2A1A 2 cos
2 2
Resultant Intensity
I I1 I 2 2 I1I 2 cos
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2
I1 I 2 A A2
2
I max
1
4.
A1 A 2
2 2
Imin I1 I 2
5. I Imax cos2
2
Relation between slit width and intensity
W1 I1 A12
6. W slit width
W2 I 2 A 22
Condition for maxima and minima
L n n 0,1, 2,3,...
2n 1 n 1, 2,3,...
2
and for destructive interference d sin 2n 1 n 0,1, 2,3,...
2
Distance to the nth bright fringe from central maximum
nD
y nb n 0,1, 2,3,... and to the n th dark fringe
d
D
y nd 2n 1 n 1, 2,3,...
2d
D
Fringe width,
d
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Angular fringe width
D d
12.
D d
If YDSE is performed in a medium
1
13.
Angular width
1
14. If transparent sheet is introduced in the path of one of the two waves,
shift produced is given by
D
y0 1 t; y0 1 t
d
y 1 t
no. of fringes shifted n
15. Diffraction : Bending of light around the corners of opaque obstacles
and apertures
a sin 2n 1 n 1, 2,3,...
2
x D
First sec. min i.e. x
a D a
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2
Angular width of the central maximum 2
a
2D
Linear width of the central maximum 2x 2 D
a
The first minimum for the diffraction pattern of circular aperture of
1.22
diameter d is located by sin
d
16. Doppler effect of light
v
c
17. Polarization : [Process of restriction of light vectors into a particular
plane]
I0
Malu’s law (cosine squared law) I 2 I1 cos I1
2
nd 1
tan B ; tan B
nr sin C
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CHAPTER - 09
DUAL NATURE OF MATTER AND RADIATION
Work function 0
hc
E h
c = velocity of light
= wave length
h = 6.63 10 34 Js
E h
Effective mass of photon, m c 2 c 2
h h
Photon momentum, P mc
c
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P P
per second, N
h hc
Photoelectric effect
When light of suitable frequency incident on metal, electrons are
emitted from its surface.
hc
work function 0 h 0
0
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1 1 1
mv 2max h 0 h
2 0
Where ‘Vmax’ is the velocity of the fastest photoelectron.
If V0 is the stopping potential, K max eV0
eV0 h 0
h 0
V0 . This is of the form y = mx + c
e e
h
So V0 versus graph is a straight line with slope = and
e
0
Y intercept =
e
BC h
slope tan
AB e
o
If is in A, the energy of photon
12375
in eV is given by
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De-Broglie wave equation
The wavelength associated with a particle of mass ‘m’ moving
with velocity ‘v’ is given by
h h h
(P - momentum, K - kinetic energy)
mv P 2mK
When an electron accelerated by a potential difference V,
h 12.27 o
A This is verified by Davisson & Germer
2meV V
X-Rays
eV h
eV
h
hc
Cut-off wavelength, 0
eV
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CHAPTER - 10
ATOMS & NUCLEI
ATOMS
Dalton’s atomic theory
All elements are composed of invisible particles called atoms
Compounds are formed of atoms of two or more elements
Thomson’s atomic model
Atom consists of positively charged protons and negatively charged
electrons
Atom is neutral
Rutherford’s atomic model
Atoms contains a positively charged tiny particle at its centre known
as nucleus
Inside the nucleus there are protons and neutrons
Outside the nucleus there are the electrons
1 1 z1e z 2e
mv 2 r-distance of closest approach
2 4 0 r
Impact parameter
scattering angle
Ze2 cot
2 E K kinetic energy
b
40 EK b impact parameter
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Rutherford’s scattering formula
Ni nt z 2 e4
N
8 0
2
r 2 E K2 sin 2
2
N = Number of alpha particles per unit area that reach the screen
at a scattering angle
Ni = Total number of alpha particles that reach the screen
n = Number of atoms per unit volume in the foil
Bohr’s atomic model
The electrons in an atom are revolving in certain fixed orbits for which
the angular momentum of the electrons is an integral multiple of h or
h
2
L = nh
nh
L
2
The electrons in the stationary orbits do not radiate energy
If an electron jumps from initial state of energy En to a final state of
lower energy Em, energy of emitted photon is given by
h E n E m
Bohr’s formulae
4 0 n 2 h 2 0.529n 2 o
Radius of nth orbit = rn , rn A
42 mZe 2 Z
1 2ze2
Velocity of electron in the nth orbit v n
4 0 nh
2
2.2 106 m / s
n
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1 1 1
is given by Rz 2 2 2
n n2
R is called Rydberg’s constant
2
1 22 me 4
R 1.097 107 m 1
4 0 ch 3
13.6z 2
Ionisation energy = eV
n2
13.6z 2
Ionisation potential = volt
n2
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z 2 e4 m 1 1 2 1 1
2 2 Rcz 2 2
8 02 h 3 n1 n 2 n1 n 2
n n 1
N
2
Time period of revolution of electron in nth orbit
n3
Tn
22
Angular momentum of electron in nth orbit
nh
Ln
Z2
NUCLEI (SYNOPSIS)
1. Atomic mass uni (amu)
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9.1 1031 kg
3. Nuclear size
1
R R0A 3 R Radius of nucleus
R 0 1.2 1015 m
A mass number
1 eV = 1.6 10 19 J
6. Mass defect m
m Zm p A Z m n M
Z - atomic number
A - mass number
mp - mass of proton
mn - mass of neutron
M - actual mass of nucleus
Binding energy of a nucleus (Eb)
E b m 931.5 MeV
binding energy E b
E bn
mass number A
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7. Radio activity
Law of radioactive decay
It states that “the rate of disintegration at any instant of time is directly
proportional to the number of radioactive atoms present in the sample
at that instant”
dN
N
dt
N = No. of radioactive atoms
N N O e t
decay constant
Activity (R)
dN
R or R N
dt
Units of radio activity
SI unit of activity is Becquerel.
1 Becquerel (1 Bq) means one disintegration per second
Another unit of activity is curie (Ci)
1 curies = 3.7 1010 decays per second
= 3.7 1010 Bq
1 Ruther ford (Rd) = 106 dps
Half life Period T1
2
0.693
T1
2
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1
T1 0.693
2
n t
1 1 T
N N0 or N N 0
2 2
where t = nT
t
After ‘t’ seconds, N N 0 e
8. Alpha decay
Z X A Z 2 Y A 4 2 He 4 Q
Disintegration energy (Q value)
Q m X m Y m He C 2
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decay
Z X A Z1 Y A e 1 Q
- antineutrino
n P e 1
decay
Z X A Z1 Y A e Q
- neutrino
P n e
10. Gamma decay
Z X A* Z X A
11. Nuclear reaction
Nuclear fission
In nuclear fission a heavier nucleus when bombarded with neutron
splits into two or more lighter nuclei, with the emission of large amount
of energy.
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Case 2 : K = 1, self-sustaining chain reaction (critical state)
Case 3 : K > 1, Results explosion (super critical state)
Nuclear reactor
1. Fuel Uranium 235, Plutonium 239
2. Neutron source Berilium and polonium powder
3. Moderator Grafite and heavy water
4. Control rod Cadmium & boron
5. Coolant Liquid sodium and heavy water
Nuclear fusion
In nuclear fusion, when two light nuclei fuse to form a larger nucleus,
energy is released.
Eg. 1 H 1 H 1 H e 0.42 MeV
1 1 2
1 H 2 1 H 2 2 H3 n 3.27 MeV
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CHAPTER - 11
SEMICONDUCTOR ELECTRONICS
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CHAPTER - 12
TRANSISTORS
Transistor Regions
Name of Dopping
Size Purpose
Region Profile
Emitter Heavy Medium Emits majority charge carriers
Base Least Smallest Space for recombination
Collector Medium Largest Collect charge carriers
Type of Transistors
npn
pnp
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Regions of operation
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I E I B IC
1
1 1
Applications of a transistor
Transfer characteristics
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Applications of transistor
0.7 < Vi < VT 0.3 < Vi <VT Flucututes Fluctuates Active Amplitude
Transistor parameters
I o/ p
Current gain A I
Ii
p
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R out
Voltage gain A V A I
R in
R out
Power gain A P A I
2
= Trans conductance Rout
R
in
AI
Trans conductance =
R in
Digital Electronics
130 AA
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A.B A B AB AC BC AB AC
A B A.B
A B . A C . B C A B . A C
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Universal Gates : NAND & NOR
Gate used/
NAND NOR
Imple me nted
NOT 1 1
AND 2 3 Number of
universal
OR 3 2
gates required
NAND X 4 to implement
15 complementary
NOR 4 X universal gates
XOR 4 5 is 4
XNOR 5 4
I.C. Technology
No. of components in
Name I.C. Technology
1mm x 1mm Area
Less than 10 Small scale Integration (SSI)
< 100 Medium scale Integration (MSI)
< 1000 Large scale Integration (LSI)
> 1000 Very large scale Integration (VLSI)
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CHEMISTRY
CHAPTER - 01
SOLID STATE
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Nature of
Nature of Physical &
interaction
Type of solid constituent electrical Examples
between
particles properties
particles
a) Soft
a) Dispersion or b) Low melting
Molecular : London forces points a) H2, CO2
a) Non-polar b) Dipole-dipole c) Non-
Molecules b) HCl, SO2
b) Polar force conductors of
c) Hydrogen bonded c) Hydrogen electricity in c) H2O
bonding both solid and
liquid states
a) Relatively
hard
b) Brittle
c) High melting
Ionic (Coulombic points
NaCl, MgO,
Ionic Ions or electrostatic) d) Non-
ZnS
bonding conductors of
electricity as
solids, but
conduct when
melted
a) Range from
very hard to
very soft
b) Melting
Positive points range
metal ions from high to
in a sea of low
Metallic Metallic bonding Fe, Mg, Cu
delocalized c) Conduct
free electricity in
electrons both solid and
liquid states
d) Have
characteristic
luster
a) Very hard
b) Very high
melting points C(diamond)
Atoms and
Covalent c) Non- SiO 2
Network chemical
bonding conductors of (quartz)
subunits
electricity C(graphite)
(graphite is an
exception)
Crystal lattice
The regular three dimensional arrangement of points in space is called
crystal lattice. There are 14 crystal lattice are collectively called
Bravais lattice.
Unit cell
The smallest repeating portion of crystal lattice is called unit cell.
These are 2 types
1) Primitive
2) Centred
a) Body centred
b) Face centred
c) End centred
Seven primitive unit cells and their possible variations as
centred unit cells
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Axial
Crystal system Possible variations distance Axial angles Examples
or edge
Primitive, body-centred, 0 NaCl, Zinc
Cubic a =b =c 90
face-centred blende, Cu
White tin,
Tetragonal Primitive, Body- centred a b c 90 0 SnO 2, TiO 2,
CaSO 4
Calcite
Rhombohedral or 0
Primitive a =b =c 90 (CaCO 3),
Trigonal
HgS(cinnabar)
Monoclinic
Monoclinic Primitive, End-centred a b c 900 , 90 0 sulphur,
Na 2SO 4.10H2 O
a bc 90 0 K2Cr2O7,
Triclinic Primitive CuSO 4.5H2O,
H3 BO 3
Contribution of particles at
Total no.
System
Body Face of atoms
Corner
centre centre
1) Simple
8 × 1/8 = 1 0 0 1
cubic
2) bcc 8 × 1/8 = 1 1 0 2
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Cubic close
packing
Simple cubic packing Hexagonal close Body-centred cubic
(ccp) or face-
(scp) packing (hcp) packing (bcc)
centred
cubic (fcc)
C.No. : 6 12 12 8
Metals like Li, Na, K,
Cu, Ag, Au, Rb, Cs, Ba, Cd, Fe,
Examples : Po Mg, Zn, Mo, V, Cd
Ni, Pt, etc. Mn, etc., crystallise in
bcc arrangement
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Density of unit cell
zM
a3NA
S2- - ccp
Zn2+ = 4 ZnS, CuCl,
ZnS (Zinc blende) Zn - alternate 2-
2+ 4
S =4 CuBr, CuI
tetrahedral voids
Ca2+ - ccp
Ca2+ = 8
CaF2 (Fluorite) F- - all the 4 CaF2, SrF2
F- = 4
tetrahedral voids
O 2- - ccp Na2O,
Na+ = 4
Na2O(antifluorite) Na2+ - all the 4 K2O, Na2S,
O2- = 8
tetrahedral voids K2S, Li2O
radius of cation r
radius ratio
radius of anion r
138
Brain Pointer
r + /r - CN G eometry
Defects in solids
Electrical properties
139
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CHAPTER - 02
SOLUTIONS
Mass of component
1. Mass percentage (w/w) = 100
Total mass of solution
vol.of component
2. Volume percentage (v/v) = 100
Total vol.of solution
140
Brain Pointer
Mass of component
= 106
Total mass of solution
B 1000
6. Molarity =
M B vol(ml)
B 1000
7. Molality (m) =
M B A (g)
1000
8. Normality (N) = No.of gram equivalent of solute vol ml
No. of gram formula masses of solute
9. Formality (F) =
Volume of solution in litre
Henry’s law state that partial pressure of a gas in vapour phase (P) is
proportional to the molefraction of a gas in solution.
P = KHX
PA A
PA A PA0
PTotal PA PB
PTotal A PA0 B PB0
142
Brain Pointer
H mixing 0 Smixing ve
Vmixing 0 G mixing ve
Non-ideal solution
Solutions which do not obey Raoult’s law. A–A and B–B interactions
are different from A – B interaction.
Vmixing 0 Vmixing 0
Non-ideal solution showing positive deviation
A–A and B–B interactions are stronger than A–B interaction.
Vmixing ve Smixing ve
H mixing ve G mixing ve
Vmixing ve Smixing ve
H mixing ve G mixing ve
A PA0
Mole fraction of A in vapour phase (YA) =
A PA0 B PB0
B PB0
Mole fraction of B in vapour phase YB =
A PA0 B PB0
Azeotropes
Solutions which boil at constant temperature without changing their
composition
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Minimum boiling azeotrope
Colligative properties:
PA0 PA nB
B
PA0
nA nB
PA0 PA n B w B M A
PA0 n A MB w A
Tb Tb Tb0
Tb molality m
Tb K b m
w B 1000
Tb K b
MB wA
K b Molal elevation / ebullioscopic constant
2
RTb0 M A
Kb
1000 vap H
144
Brain Pointer
Tf Tf0 Tf
Tf molality m
Tf K f m
w B 1000
Tf K f
MB wA
K f molal depression / Cryoscopic cons tan t
2
RTf0 M A
Kf
1000 fus H
Osmosis
It is the spontaneous movement of solvent molecules from a less
concentrated solution to a more concentrated solution through semi
permeable membrane.
Osmotic pressure
CRT
n
B RT
V
w RT
B
MB V
Isotonic solution
Solutions having same osmotic pressure
Reverse osmosis
If external pressure applied is greater than osmotic pressure, the flow
of solvent molecules can be made to proceed from solution towards
pure solvent.
145
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Abnomal molecular weight
Abnormal molecular weights and colligative properties are observed
in some cases where the experimental and theoretical values differ
considerably.
Dissociation
i = >1
i = 1 + (n – 1)
i 1
n 1
Association
i<1
1
i=1+ 1
n
i 1
1
1
n
146
Brain Pointer
CHAPTER - 03
ELECTROCHEMISTRY
It is a device which converts chemical energy into It is a device which converts electrical
1
electrical energy energy into chemical energy
7 To set up this cell, a salt bridge/porous pot is used No salt bridge is used in this case.
Galvanic cell
Zn2 2e
Anode : Zn
147
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Characteristic features of galvanic cell
2 2
Cell representation : Zn Zn Cu Cu
Cell representation : E0 , H / H2 , Pt
E0cell Ecathode
0 0
Eanode
red red
Electrochemical series
The elements are arranged in either increase or decrease order of
standard reduction potential
148
Brain Pointer
Applications
1) To find E0cell EC0 E0A
2) Selection of reducing agent or oxidising agent
3) To predict the reactivity of metals and non metals
4) To construct galvanic cell
5) To predict the electrolysis product
Nernst Equation
For half cell
Mnn ne
M
E E0 n
RT
ln
Product
M n
M
M
M nF Reactants
E E0 n
2.303RT
log
Product
M n
M
M
M nF Reactants
E E0 n
0.0591
log
Product
M n
M
M
M
n Reactant
For cell
0 RT Products
Ecell Ecell ln
nF Reactants
Ecell E0cell
2.303RT
log
Products
nF Reactants
0
Ecell Ecell
0.0591
log
Products
n Reactants
Concentration cell
A galvanic cell constructed with same half cells
149
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1) Electrode concentration cell
Pt, H2 H H2 , Pt
(P1 )atm (P2 )atm
0.0591 P2
Ecell log P2 P1
n P1
2) Electrolyte concentration cell
0.0591 C
Ecell log 1 C1 C2
n C2
G0 nFEcell
0
G0 nRT ln K C
0.0591
E0cell log K C
n
0.0591
Ecell E0cell log K C
n
For a spontaneous reaction
G0 0, Ecell
0
0, K C 1
Electronic and electrolytic conductors
150
Brain Pointer
R
A
RA
Specific resistance
Specific conductance 1R . A
In electrolytic conductors
Specific conductance : Conductance offered by the ions present in a
unit volume of electrolytic solution
G*
A
C G* cellconstant
1 1 1
Unit of Sm or cm
Conductivity decreases when dilution increases, this is due to
decrease in the number of ions present in unit volume of electrolytic
solution.
Molar conductance/equivalent conductance
1000
m
M
1000
eq
N
m
x
eq
0
m m A c
y = c + mx
For weak electrolyte : Kohlrausch’s law
0
m 0
A pBq p. m A q q. m
0 p
B
C
m
1)
m
2
Cm
2) K a 0
m 0
m m
0 1000
3) m
S
Q
ZQ Z electrochemical equivalent
E
Q E equivalent weight
F
E
It F Faraday
F
1 E1
2 E2
152
Brain Pointer
Products of Electrolysis
Na
e Na s
1
Molten NaCl Na metal Cl 2 gas aq Cl aq C l2 g e
2
1 1
Aqueous NaCl H2 gas Cl 2 gas H2 O e H2 ( g ) OHaq Cl aq 2 Cl 2 g e
2
1 2H2 O O2 (g ) 4Haq 4e
Dil. H2SO 4 H2 gas O 2 gas H a q e H
2 2 g
1
Conc. H2SO 4 H2 gas S 2 O82 H aq e H 2SO 24 aq S 2O 82 aq 2e
2 2 g
Batteries
Corrosion
Rust : Polyhydrated ferric oxide Fe2O3 . xH2O
Rusting of iron
2Fe 2 4e
Anode : 2Fe
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Prevention of corrosion
Surface coating with bisphenol
Galvanisation : Fe is coated with Zn (Sacrificial protection)
Electrochemical method : Cathodic protection is the metal to be
protected as cathode.
154
Brain Pointer
CHAPTER - 04
CHEMICAL KINETICS
R P
rav
t t
Concentration
Unit of rate of reaction mol L1s 1
Time
Instantaneous rate of reaction :
C dC
lim
t 0 t dt
155
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For any reaction aA bB cC dD
1 d A 1 d B 1 d C 1 d D
a dt b dt c dt d dt
Rate law,
r A B
x y
rate
Note that ‘X’ and ‘Y’ are order of reaction with respect to ‘A’ and ‘B’
respectively. (x + y = n) n overall order..
Order M olecularity
156
Brain Pointer
RP
R 0 R
K [R]0 - Initial concentration, [R] - Final concentration,
t
t - Time
R 0
t1
2 2K
3
R 0 t 75% t1
t100 2t 1 2 2
K 2
2.303 R 0
K log R 0 Initial concentration;[R] Final concentration
t R
2.303 a
K log a Initial concentration; x decomposed amount of reactant
t ax
0.693
t 1 is independent of initial concentration : t 1
2 2 K
R 0
Amount left after ' n ' t 1
2 2n
total time
'n ' no : of t1/2
t1
2
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Brilliant STUDY CENTRE
t 1 50%
2
2t 1 75%
2
3t 1 87.5%
2
3.3t 1 90%
2
4t 1 93.75%
2
5t 1 96.875%
2
6.6t 1 99%
2
10t 1 99.9%
2
t 64 2t 40%
t 99 2t 90%
t19 2t 10%
1 1 1
K
n 1 t R n 1 R 0n 1
2n 1 1
t1
2
n
n 1 K n a n 1
Arrhenius equation (Temperature dependence of rate constant)
K Ae Ea /RT
or
K2 Ea 1 1
log
K1 2.303 R T1 T2
158
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Ea b Ea f Exothermic
H ve
Ea f Ea b H
Endothermic
Ea f Ea b Endothermic
H ve
Ea f Ea b H
K PZAB e Ea / RT
K rate constant
P Probability factor/steric factor
ZAB Collision frequency
e Ea / RT Boltzmann factor
E a Activation energy
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Brilliant STUDY CENTRE
T able of Formula
Type of re a ction Inte gra te d Equa tion for K Unit of ra te consta nt Ha lf life pe riod
K
R 0 R R 0 t1
Zero order
t m ol L 1 s 1 2K 2
2.303 R 0 0.693
K log t1
First order t R s 1 2 K
1 1 1 1
Second order K mol L
1 1
s 1 t1
t R R 0 2 K 2a
1 1 1 3
t1
Third order K
2t R 2 R 2
mol L 1 2
s
1
2 2 K3 a
2
0
160
Brain Pointer
161
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CHAPTER - 05
SURFACE CHEMISTRY
1. Surface chemistry:
Study of surface phenomena
Metal corrosion, Electrode processes, catalysis, etc
2. Surface
Interface between two different phases
3. Adsorption:
Surface phenomena
Molecular species accumulate on the surface rather than in the
bulk of a substance
4. Adsorbent
Substance providing a surface for adsorption
5. Adsorbate:
Accumulating molecular species
6. Absorption
Bulk phenomenon
Accumulation of molecular species throughout the substance
7. Sorption
Simultaneous adsorption and absorption
8. Mechanism of adsorption:
162
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9. Types of adsorption
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Note : To find values of ‘k’ and ‘n’, take logarithm on both sides ie, log
x/m = log k + 1/n log p
Plotting log x/m against log p. We get a straight-line graph.
Slope of the graph = 1/n and y intercept = log k
Here, n = 1/slope, k = antilog (intercept)
Value of 1/n is always between 0 and 1
13. Adsorption isobars:
• x/m is plotted against T at constant pressure
164
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16. Catalyst
• Substance that can alter the rate of a reaction without any chemical
change by itself
17. Catalysis
• Phenomenon of increasing or decreasing the rate of a reaction by
a catalyst
18. Types of catalysis
A. Homogeneous catalysis:
• Reactants, catalysts - in same physical state
• Catalyst mixes homogeneously with reactants
• Eg : Lead chamber process
B. Heterogeneous catalysis:
• Reactants, catalysis - different physical states
• Eg : Contact process
19. Features of solid catalysts:
A. Activity : Ability to accelerate the rate of the reaction
B. Selectivity : Ability to direct a reaction to yield a particular product
20. Autocatalysis:
• Catalyst is not a pure substance
• One of the products catalyses the reaction
• At first, slow reaction
• Become faster towards the mean time
• Eg : In oxidation of solution of oxalic acid by acidified KMnO4
solution - Mn2+, one of the products act as catalyst.
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Brilliant STUDY CENTRE
21. Positive catalysis:
• A catalyst increases the reaction rate
• Eg : Pt for the decomposition of H2O2
22. Negative catalysis:
• A catalyst decreases the reaction rate
• H3PO4 for the decomposition of H2O2
23. Shape selective catalysis:
• Depends on the pore size of the catalyst and size and shape of
reactant and product molecules
• Eg: Zeolites (NaAlSiO4), ZSM-5
24. Promoters:
• Increases the activity of a catalyst.
Eg : Mo in Haber process
25. Poisons:
• Decreases the activity of a catalyst
Eg : CO in Haber process
26. Adsorption theory of heterogeneous catalysis
Steps involve
• Diffusion of reactants towards the surface of catalyst
• Adsorption of reactants on the surface of catalyst
• Reaction of reactants to give the product
• Desorption of products
• Diffusion of products away from the surface of catalyst.
166
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167
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29. Colloids:
• Two types substances - Crystalloids and colloids by Thomas
Graham
• Readily diffuse through semi permeable membrane - Crystalloids
(less than 1nm)
• Do not diffuse very slowly through semi permeable membranes -
Colloids (1nm to 1000 nm)
• Colloidal system is intermediate between crystalloids and
suspensions
• Colloidal system is heterogeneous
• Contains dispersed phase (solute) and dispersion medium
(solvent)
30. Classification of colloids:
A. Based on physical states of dispersed phase and dispersion
medium:
Note:
• Water as dispersion medium - Hydrosols or Aqua sols
• Alcohol as dispersion medium - Alco sols
• Benzene as dispersion medium - Benzo sols
• Gases as dispersion medium - Aerosols
168
Brain Pointer
171
Brilliant STUDY CENTRE
Note : The combination of two layers of opposite charges around
the colloidal particle is called Helmholtz electrical double layer.
The first layer is called fixed layer and outer layer is called
diffused layer. The potential difference between fixed layer and
diffused layer is called zeta potential or electrokinetic potential.
35. Coagulation/Flocculation:
• Precipitation of colloidal particles
• Various methods are present - electrophoresis, mixing of opposite
charged colloids, boiling, persistent dialysis, addition of an
electrolyte, etc
36. Coagulation /flocculation value:
• It is the minimum concentration of an electrolyte, in “millimoles”,
required to coagulate 1L sol in 2 hours.
• Smaller the coagulation value, larger the coagulation power.
37. Hardy-Schulze rule
• Greater the valency of coagulating ion, greater will be the
coagulation power.
4
• For positive sols : Fe CN 6 PO34 SO 42 Cl
172
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173
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CHAPTER - 06
GENERAL PRINCIPLES AND PROCESSES OF
ISOLATION OF ELEMENTS
The mineral from which metal can be extracted conveniently are called
ores
174
Brain Pointer
Concentration
1. Hydraulic washing or gravity separation or levigation
2. Magnetic separation
3. Froth flotation
4. Leaching
Extraction of crude metal from concentrated ore
PbO C
Pb CO
Reduction with CO
Fe2O3 3CO
2Fe 3CO2
Cr2O3 Al
2Cr Al2O3
Cu2S 3O2
3Cu2O 2SO2
2Cu2O Cu2S
6Cu SO2
Electrolytic reduction
Cu & Zn are obtained by electrolysis of aqueous solution of their
sulphates
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Metallurgy of some important metals
1. Extraction of iron from hematite
At 500 - 800 K (lower temperature in blast furnace)
3Fe2O3 CO
2Fe3 O 4 CO2
Fe3 O4 CO
3Fe 4CO2
Fe2O3 CO
2FeO CO2
At 900 - 1500 K (high temperature range)
C CO2
2CO; FeO CO
Fe CO2
Lime stone is also decomposed to CaO which removes the silicate
impurity of the ore as slag
CaCO3
CaO CO2 ; CaO SiO2
CaSiO3
2. Extraction of copper
From copper glance
2CuFeS2 4O2
Cu2S 2FeO 3SO2
2FeS 3O2
2FeO 2SO2 ; FeO SiO2
FeSiO3
2ZnS 3O2
2ZnO 2SO2
1673 K
ZnO C Zn CO
4. Extraction of gold or silver (Mac Arther - Forrest cyanide
process)
4 Au / Ag CN2 4OH
4Au / Ag 8CN 2H2O O2
2
2 Au / Ag CN2 Zn
2Au / Ag Zn CN 4
176
Brain Pointer
4CuO CH4
4Cu CO2 2H2O
3. Electrolytic refining Metals such as Cu, Ni and Al are refined
electrolytically
4. Vapour phase refining
Mond’s process
330 350K
Ni 4CO Ni CO 4
Ni CO 4
450 470K
Ni 4CO
ZrI4
Zr 2I2
5. Chromatographic method
Different components are adsorbed on the surface of an adsorbent
at different rates.
177
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CHAPTER - 07
P-BLOCK ELEMENT-II
178
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Oxidation states : The common oxidation states are +3, +5, –3.
The tendency to show -3 oxidation state decreases down the group
due to decrease in electronegativity which is due to increase in atomic
size.
The stability of +5 oxidation state decreases whereas stability of +3
oxidation state increases due to inert pair effect.
Nitrogen shows oxidation states from -3 to +5
Nitrogen and phosphorus with oxidation states from +1 to +4 undego
oxidation as well as reduction in acidic medium. The process is called
disproportionation.
179
Brilliant STUDY CENTRE
Reactivity towards oxygen : All group 15 elements from trioxides
(M2O3) and pentoxides (M2O5).
Acidic character of oxides decreases and basicity increases down
the group. This is because the size of nitrogen is very small. It has a
strong positive field in a very small area. Therefore, it attracts the
electrons of water’s O–H bond to itself and release H+ ions easily. As
we move down the group, the atomic size increases. Hence, the
acidic character of oxides decreases and basicity increases as we
move down the group.
Reactivity towards halogen : Group 15 elements form trihalides
and pentahalides.
Trihalides - covalent compounds and become ionic down the group.
sp3 hybridisation, pyramidal shape
Pentahalides - sp3d hybridisation, TBP shape
They are Lewis acids because of the presence of vacant d-orbitals.
PCl5 Cl PCl6
180
Brain Pointer
Dinitrogen:
Preparation:
Ba N3 2
heat
Ba 3N 2
Properties
It is a colourless, odourless, tasteless and non-toxic gas. It is
chemically un reactive at ordinary temperature due to triple bond in
N N which has high bond dissociation energy..
Ammonia : Ammonia molecule is trigonal pyramidal with nitrogen
atom at the apex. It has 3 bond pairs and 1 lone pair. N is sp3
hybridised.
Preparation: Haber’s process
4NH3 5O 2
Pt /Rh gauge
500 K,9 bar
4NO 6H 2 O............ i
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Phosphorus:
a. It shows the property of catenation to maximum extent due to
most stable P–P bond.
b. It has many allotropes, the important ones are:
i. White phosphorus
ii. Red phosphorus
iii. Black phosphorus
Preparation
182
Brain Pointer
Phosphine
Preparation:
i)
ii)
183
Brilliant STUDY CENTRE
Oxoacids of phosphorous H3PO2, H3PO3, H4P2O7 , H3PO4 etc.
GROUP 16 ELEMENTS
Oxidation states : They show –2, +2, +4, +6 oxidation states. Oxygen
does not show +6 oxidation state due to absence of d-orbitals. Po
does not show +6 oxidation state due to inert pair effect.
The stability of –2 oxidation state decreases down the group due to
increase in atomic size and decrease in electronegativity.
Oxygen shows –2 oxidation state in general except in OF2 and O2F2.
The stability of +6 oxidation state decreases and +4 oxidation state
increases due to inert pair effect.
Ionisation enthalpy : Ionisation enthalpy of elements of group 16 is
lower than group 15 due to half filled p-orbitals in group 15 which are
more stable. However, ionization enthalpy decreases down the group.
Electron gain enthalpy : Oxygen has less negative electron gain
enthalpy than S because of small size of O.
From S to Po electron gain enthalpy becomes less negative to Po
because of increase in atomic size.
Melting and boiling point : It increases with increase in atomic
number. Oxygen has much lower melting and boiling points than
sulphur because oxygen is diatomic (O2) and sulphur is octatomic
(S8).
Reactivity with hydrogen:
All group 16 elements form hydrides
Bent shape
Intermolecular
H bonding Increase in van der Waals forces
184
Brain Pointer
Thermal stability : H2O < H2S < H2Se < H2Te < H2Po
This is because the H-E bond length increases down the group.
Therefore, the bond dissociation enthalpy decreases down the group.
Reactivity with oxygen : EO2 and EO3
Reducing character of dioxides decreases down the group because
oxygen has a strong positive field which attracts the hydroxyl group
and removal of H+ becomes easy.
Acidity also decreases down the group.
SO2 is a gas whereas SeO2 is solid. This is because SeO2 has a
chain polymeic structure whereas SO2 forms discrete units.
Reactivity with halogens : EX2 EX4 and EX6
The stability of halides decreases in the order F– > Cl– > Br– > I–. This
is because E–X bond length increases with increase in size.
Among hexa halides, fluorides are the most stable because of steric
reasons.
Dihalides are sp3 hybridised, the tetrahedral in shape.
Hexafluorides are only stable halides which are gaseous and have
sp3d2 hybridisation and octahedral structure.
H2O is a liquid while H2S is a gas. This is because strong hydrogen
bonding is present in water. This is due to small size and high
electronegativity of O.
Oxygen
Preparation:
2KClO3
heat
MnO2
2KCl 3O2
2H 2 O2(aq)
Finely divided metals
2H 2O O 2(g)
185
Brilliant STUDY CENTRE
Oxides:
The compounds of oxygen and other elements are called oxides.
Types of oxides:
a. Acidic oxides : Non-metallic oxides are usually acidic in nature.
Na 2 O H 2 O
2NaOH
K 2O H 2O
2KOH
Ca OH 2
CaO H 2 O
Al2O3 6HCl(aq)
2AlCl3(aq) 3H 2O
2Na 3 Al OH 6 aq
Al2O3 6NaOH (aq) 3H 2 O
186
Brain Pointer
b) Monoclinic ( -sulphur) : sulphur
369 K
sulphur
At 369 K both forms are stable. It is called transition temperature.
Both of them have S8 molecules. The ring is puckered and has a
crown shape.
Another allotrope of sulphur - cyclo S6 ring adopts a chair form.
S2 is formed at high temperature(–1000 K). It is paramagnetic because
of 2 unpaired electrons present in anti bonding orbitals like O2.
Sulphuric acid:
Preparation : By contact process
1
S8 O 2
SO 2
8
SO3(g) H 2SO 4
H 2S2 O7 (Oleum)
H 2S2 O7 H 2O
2H 2SO 4
96 98%
187
Brilliant STUDY CENTRE
Electron gain enthalpy becomes less negative down the group
because atomic size increases down the group.
Electronegativity : These elements are highly electronegative and
electronegativity decreases down the group. They have high effective
nuclear charge.
Bond dissociation enthalpy:
Bond dissociation enthalpy follows the order Cl2 > Br2 > F2 > I2
This is because as the size increases bond length increases.
Bond dissociation enthalpy of Cl2 is more than F2 because there are
large electronic repulsions of lone pairs present in F2.
Colour : All halogens are coloured because of absorption of radiations
in visible region which results in the excitation of outer electrons to
higher energy levels.
Oxidising power : All halogens are strong oxidising agents because
they have a strong tendency to accept electrons.
Order of oxidising power is F2 > Cl2 > Br2 > I2
Reactivity with H2
Acidic strength : HF < HCl < HBr < HI
Stability : HF > HCl > HBr > HI
This is because of decrease in bond dissociation enthalpy.
Boiling point : HF > HI > HBr > HCl
HF has strong intermolecular H bonding
As the size increases van der waals forces increases and hence
boiling point increases.
% ionic character : HF > HCl > HBr > HI
Dipole moment : HF > HCl > HBr > HI
Electronegativity decreases down the group.
Reducing powr : HF < HCl < HBr < HI
Reactivity with metals : Halogens react with metals to form halides.
Ionic character : MF > MCl > MBr > MI
Halides in higher oxidation state will be more covalent than the one in
the lower oxidation state.
188
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189
Brilliant STUDY CENTRE
Atomic radii : Increases down the group because number of shells
increases down the group
Electron gain enthalpy : They have large positive electron gain
enthalpy because of stable electronic configuration.
Melting and boiling point : Low melting and boiling point because
only weak dispersion forces are present.
XeF2 is linear, XeF4 is square planar and XeF6 is distorted octahedral.
KrF2 is known but no true compound of He, Ne and Ar are known.
Compounds of Xe and F:
Xe F2
673K, 1bar
XeF2
Xe 2F2
873K
7 bar
XeF4
Xe 3F2
573K
60 70 bar
XeF6
XeF4 O 2 F2
XeF6 O 2
6XeF4 12H 2 O
4Xe 2XeO3 24HF 3O 2
XeF6 3H 2 O
XeO3 6HF
XeF6 H 2 O
XeOF4 2HF
XeF6 2H 2 O
XeO 2 F2 4HF
190
Brain Pointer
CHAPTER -08
THE d and f BLOCK ELEMENTS
Transition elements are the elements which lie between ‘s’ and ‘p’
block elements in the long form of periodic table. They are called
d-block elements as the last electron enters in d-orbital. The four series
of d-block elements are 3d, 4d, 5d and 6d.
Zn, Cd and Hg are not considered as transition element because of
its completly filled d-orbital.
General Electronic Configuration (n – 1) d1–10 ns0–2
Enthalpy of atomisation, melting point and boiling point of d-block
elements are high due to involvement of greater no.of valence electrons
in the interatomic metallic bonding [from (n –1)d and ns]. These
properties are maximum at the middle of the series.
Atomic size and ionic size : Decrease in the series with increase in
atomic number because of increase in nuclear charge.
Increases down the group. (except 4d & 5d series have most same
radii due to lanthanoid contraction)
Ionisation enthalpy (IE) : It increases from left to right in a series.
• The IE1 of Zn, Cd and Hg are high due to stable d10 configuration.
• IE2 of Cr and Cu is high due to disruption of d5 and d10 configuration.
• IE3 of Mn is very high due to disruption of d5 configuration.
Oxidation state : All transition elements show variable oxidation state
due to small energy difference between (n –1) d and ns orbital) except
first and last series. Highest oxidation state is equal to total number of
s and d electrons.
191
Brilliant STUDY CENTRE
E 0M2 /M value of Zn, Mn and Ni are more negative due to stable d5(Mn)
and d10 (Zn) configuration and Ni (high ‘-ve’ hydration enthalpy).
Cu has positive E0 value due to its hydration enthalpy.
E 0M3 /M 2 : The values are high for Zn (d10) and Mn (d5) due to stable
configuration. Low value for V is due to stability of half filled t2g
configuration of V2+.
Magnetic property : Transition metal ions and their compounds are
paramagnetic. Magnetic moment can calculated by
n n 2 BM . n - no.of unpaired electrons.
192
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It oxidise I I 2 It oxidise I I 2
a) 10I 5I 2 10e a) 6I 3I2 6e
b)5C 2 O 24 10CO 2 10e b)3Sn 2 3Sn 4 6e
193
Brilliant STUDY CENTRE
Inner transition elements
The f-block elements are called inner transition elements. It consists
of two series .
g) Colour of ions is due to f-f transition g) Colour of ion is due to f-f transition
194
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CHAPTER - 09
CO-ORDINATION COMPOUNDS
Eg : K 4 Fe CN 6
195
Brilliant STUDY CENTRE
Chelating ligand : A bidentate or polydentate ligand which can form
a stable cyclic, ring (5-6 members) like structure with the central
metal atom through co-ordinate bond. Eg: EDTA, ethylene diamine
etc. The exceptional stability of complex formed by chelating ligand
compared to monodentate ligand is known as chelate effect.
Ambidentate ligands : Monodentate ligands that are capable of
ligating through two different atoms present in it. Eg : NO 2 , SCN
Coordination number : Total number of ligands attached to central
metal atom through co-ordinate bond.
Effective Atomic Number (EAN) : It is the total number of electrons
present in the metal ion and the electrons contributed to metal by
ligands.
196
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197
Brilliant STUDY CENTRE
Inner orbital complex : An octahedral complex in which the central
metal atom is in d2sp3 hybridised. These type complexes are generally
low spin.
Outer orbital complex : An octahedral complex in which central
metal atom is sp3d2 hybridised. The are also known as high spin
complexes due to large number of unpaired electron.
Fe CO 5 , CuCl5
3
dsp3 Trigonal bipyramidal
5
SbF5
2
sp3d Square pyramidal
6 3
Octahedral (Inner orbital) Cr NH 3 , Fe CN
3 3
2
d sp 3
6 6
, Co H 2 O 6
2 2
FeF6 , Fe H 2 O 6 , Ni NH 3 6
3
sp3d2 Octahedral (Outer orbital)
Tetraheral complex
Geometry possessed by complex having coordination number 4
Central metal atom is sp3 hybridised.
Do not exhibit geometrical isomerism All positions are equivalent
Exhibits optical isomerism.
Square planar complex:
Geometry possessed by complex having coordination number 4.
Central metal atom posses dsp2 hybridisation.
Do not exhibit optical isomerism. they posses plane of symmetry
Octahedral complex:
Geometry possessed by complex having coordination number 6.
Central metal atom possess sp3d2 or d2sp3 hybridisation.
Exhibits geometrical isomerism
Exhibits optical isomerism
198
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ML n
b
complex. i.e.
K n
M 3 Lx
199
Brilliant STUDY CENTRE
Spectro chemical series : Arrangement of ligands in the increasing
order of their ability to cause crystal field splitting.
I Br S2 SCN Cl F OH C2 O 42 O 2 H 2 O NCS Py, NH 3 CN CO
High spin complex are formed if splitting energy is less than pairing
energy.
Low spin complexes are formed if splitting enegy is greater than pairing
energy.
Organometallic compounds contains a bond between metal and
carbon atom of an organic species.
5
Ferrocene : Fe C5 H5 2
biscyclopentadienyl ion
Zeises salt : K PtCl3 C 2 H 4
2
Vitamin B12 : (Cyanocobalamine) is a complex of Co3+
Metal carbonyls : Synergic bonding
200
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CHAPTER - 10
HALOALKANES AND HALOARENES
HCl + Anhy.ZnCl2
R Cl + H 2O (Groove's process)
(Lucas reagent)
NaBr + H 2SO 4
R Br + H 2O
Reflux
R OH PX 3
alcohol 3R X + H3PO 3
PCl5
R Cl + POCl3 + HCl
1. Finkelstein Reaction
R X NaI
Acetone
R I NaX
X Cl, Br
2. Swartz reaction
201
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Hg2F2 and SbF3 can also be used as a reagent for Swartz reaction.
Free radical halogenation
h
CH 4 Cl2 CH 3Cl HCl
Reactivity of halogen
F2 > Cl2 > Br2 > I2
Fluorination is an explosive reaction.
Iodination is slow and reversible. Iodination is carried out in prsence
of oxidising agents such as HIO3, HNO3 etc
Physical properties of haloalkanes
1. Boiling point orders.
1) R–I > R–Br > R–Cl > R–F
2) CH3 – (CH2)2 – CH2Br > (CH3)2 CHCH2Br > (CH3)3CBr
3) CH3CH2CH2 > CH3CH2X > CH3X
2. Bond strength of haloalkanes decreases as the size of the halogen
atom increases. Thus, the order of bond strength is
CH3F > CH3Cl > CH3Br > CH3I
3. Haloalkanes though polar are insoluble in water as they do not form
hydrogen bonding with water.
4. Density order is
RI > RBr > RCl > RF (For the same alkyl group)
CH3I > C2H5I > C3H7I
CH3Cl < CH2Cl2 < CHCl3 < CCl4
5. Dipole moment
R–Cl > R–F > R–Br > R–I
Chemical reactions
a) Nucleophilic substitution reaction
Nu + C X C Nu + X
202
Brain Pointer
NH3
C2H5NH2, (C2H5)2NH, (C2H5)3N
(C2H5)4N+ Br- (Hoffmann ammonolysis)
KCN
C2H5CN + KBr
AgCN
C2H5NC + AgBr
R ONa,
C 2H 5 O R + NaBr
(Williamson's synthesis)
Na C C H, C CH + NaBr
C 2H 5
O
R COOAg,
C 2H 5 O C R + AgBr
CH3
CH3
CH3 Step II
Step I CH3 C CH3 C Nu
CH3 C X
X- (slow) CH3 +Nu- (Fast)
CH3 CH3
Planar carbocation
Alkyl halide Substitution product
203
Brilliant STUDY CENTRE
Polar protic solvents, low concentration of nucleophiles and weak
nucleophiles favour SN1 mechanism.
In SN1 reactions, partial racemisation occurs due to the possibility of
frontal as well as backside attack on planar carbocation.
(b) SN2 type (Bimolecular nucleophilic substitution). These reactions
proceed in one step and is a second order reaction with r = k[RX]
[Nu]
During SN2 reaction 100% inversion of configuration occurs (Walden
inversion).
Reactivity of halides towards SN2 mechanisms is 1° > 2° > 3°
Rate of reaction in SN2 mechanism depends on the strength of the
attacking nucleophile.
Non-polar solvents, strong nucleophiles and high concentration of
nucleophiles favour SN2 mechanism.
2. Elimination reactions
Br
2) Wurtz-Fittig reaction
204
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3) Reaction with Mg
C 2 H 5 Br Mg
Dry ether
C 2 H 5 Mg Br
Grignard 's reagent
Cl
+ Cl2
FeCl3 , dark
310 320 K
+ HCl
CH2Cl
CH3 CHCl2 CCl3
+ Cl2
383 K
Sunlight HCl Cl 2
Sunlight HCl
Cl2
Sunlight HCl
Benzotrichloride
CuCl/HCl
C6H5Cl + N2
Sandmeyer reaction
CuBr/HBr
C6H5Br + N2
N2Cl
Cu/HCl
C6H5Cl + N2
Gattermann reaction
Cu/HBr
C6H5Br + N2
HBF4
C6 H 5 N 2 BF4
N 2 BF3
C6 H 5 F
(Balz Schiemann reaction)
KI,
C6H5I + N2 + KCl
205
Brilliant STUDY CENTRE
Chemical propeties of Aryl halides
1. Nucleophilic substitution reaction
Aryl halides are less reactive towards nucleophilic substitution
reaction. Their low reactivity is attributed due to the following reasons:
1. Due to resonance, C–X bond has partial double bond character.
2. Stabilisation of the molecule by delocalisation of electrons.
3. Instability of phenyl carbocation
4. Repulsion between electron rich nucleophile and electron rich
benzene ring.
However, aryl halides having electron withdrawing groups (like –NO2,
–SO3H, etc) at ortho and para positions undergo nucleophilic
substitution reaction easily.
Cl OH
Cl OH
I) NaOH, 443 K
II) H+
NO2 NO2
Cl OH
O2N NO2 O2N NO2
Warm
H2O
NO2 NO2
206
Brain Pointer
X
R
Ether + NaX
+ 2Na + RX
Ether
2 + 2Na + 2NaX
Biphenyl
+ Cu powder
Iodobenzene Biphenyl
DIHALOGEN DERIVATIVES
Dichloromethane (CH2Cl2) is widely used as a solvent, as a propellant
in aerosols.
207
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Trihalogen derivatives
1. Chloroform [Trichloromethane, CHCl3]
O O
NaOH C ONa
CH3 C CH3 + X2 CHX3 + CH3
Properties
1. Oxidation of CHCl3 gives poisonous gas phosgene (carbonyl chloride)
2CHCl3 O 2
Light
2COCl2 2HCl
Phosgene
OH
CHCl3 + 3NaOH CH OH HCOONa
H2O
OH
CH 3COCH 3 3I 2 4NaOH
CHI3 3NaI CH 3COONa 3H 2 O
Compounds containing either CH3CO– or CH3CH(OH) group form
yellow colour iodoform with I2 and NaOH.
208
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Polyhalogen Derivatives
1. Tetrachloromethane (Carbon Tetrachloride, CCl4)
Preparation
ii) CHCl3 Cl 2
hv
CCl 4 2HCl
CCl4 is a colourless, non-inflammable, poisonous liquid, soluble in
alcohol and ether.
USES.
Carbon tetrachloride is used
1. as a solvent for oils, fats, resins
2. in dry cleaning
3. as fire extinguisher under the name ‘pyrene’
2. Freons
The chlorofluorocarbon compounds of methane and ethane are
collectively known as freons. These are usually produced for aerosol
propellants, refrigeration and air conditioning purposes. Carbon tetra
chloride when reacts with antimony trifluoride in the presence of SbCl5
as catalyst, dichlorofluromethane (freon) is obtained.
3. DDT ( Dichlorodiphenyltrichloroethane)
Cl
Cl
Cl Cl
Cl
H
DDT is the first chlorinated organic insecticide. Its stability and fat
solubility is a great problem. It is prepared from chloral and
chlorobenzene in the presence of conc.H2SO4.
209
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CHAPTER - 11
ALCOHOL PHENOL AND ETHERS
Alcohols
OH
Hydroxyl derivatives of aliphatic hydrocarbon R H
H
R OH
Phenols
Hydroxyl derivatives of aromatic hydrocarbon
OH
Ar H
H
Ar OH
Ethers
Alkoxy or aryloxy derivatives of hydrocarbon
OR /OAr
R H H
R O R / Ar
Classification
Hydroxyquinol
Resorcinol OH Quinol OH
OH
210
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CH3 CH3
CH3 CH OH CH3 C OH
CH3 CH2 OH
2° alcohol
1° alcohol CH3
CH2 OH CH OH 3° alcohol
C OH
Aryl alcohol
OH
Phenol
Nomenclature
Alcohol R–OH
OH
Phenol
211
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Ethers R–O–R
Common name : Dialkylether (in case of both alkyl groups are same)
IUPAC name : Alkoxyalkane
Structure of functional groups
m
2p
14 96 pm
H O: C O H bond angle less than tetrahedral angle due
C H to lp-lp repulsion in oxygen atom
108.9°
H
H
109° H
O C O bond length less than C O bond length in alcohols
due to partial double bond character of benzene
136 pm
141 pm
O
H
H
C 111.7° C C O C bond angle higher than tetrahedral angle
due to repulsion between two bulky alkyl group.
H H H H
Preparation of alcohols
1. Hydration of alkene
CH 2 CH 2
H / H2O
CH 3 CH 2 OH
CH 3 CH CH 2
H / H2O
CH 3 CH CH 3
(Unsymmetrical alkene)
OH
(Markovnikov addition product)
3 step mechanism
• Protonation • Hydration • Deprotonation
212
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2. Hydroboration - oxidation
CH 3 CH CH 2
BH 3
(CH 3 CH 2 CH 2 )3 B
H 2 O2
H2O
3CH 3 CH 2 CH 2 OH
Antimarkovnikov product
H 2 Ni/ Pt / Pd or
R CHO
LiAlH 4 / NaBH 4
R CH 2 OH
Aldehyde Pr imary alcohols
O OH
H 2 Ni/Pt / Pd or
R C R
LiAlH 4 / NaBH 4
R CH R
Ketones 2 alcohol
RCOOH
LiAlH 4
H 2O
RCH 2 OH
R COOH R OH
H
RCOOR H2
Catalyst
RCH 2 OH R OH
OH
1. Dry ether
C O+R MgX C
2. H3O+
R
OH
213
Brilliant STUDY CENTRE
O OH
R C R RMgX
1. Dry ether
2. H O
R C R 3 alcohol
3
Preparation of phenols
1. From haloarenes :
ONa OH
Cl H+
NaOH
623 K, 300 atm
SO3H ONa OH
H 2SO4
NaOH
H
SO3
N2Cl
NH2 OH
NaNO 2 HCl
H2O
4. From cumene
CH 3 CH3
CH3 C O O H OH O
CH CH3
H3O
+ CH3 C CH 3
fro
Om2
air
214
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Physical properties
Chemical reactions
Alcohols act as both nucleophile and electrophiles
R O H
R O H
OH O
+ H+
215
Brilliant STUDY CENTRE
Presence of electron donating group at ortho and para position of
phenols acidity decreases.
OH OH OH
> >
NO2 CH3
Electron Electron donating group
withdrawing group
2. Esterification
Ar / R OH RCOOH
H
Ar / R O C R H 2 O
Ar / R OH RCO 2 O
H
Ar / R O C R RCOOH
Pyridine
Ar / R OH RCOCl
Ar / R O C R HCl
Reaction involving cleavage of C–O bond
1. Reaction with HX
R OH HX
R X H 2O
Order of reactivity of HX : HI > HBr > HCl
R–OH : 3° > 2° > 1°
216
Brain Pointer
R OH PCl5
R Cl HCl POCl3
3R OH PCl3
3RCl H 3 PO3
3. Dehydration
C C
H , Heat
C C + H2O
H2SO4 / H3PO4
H OH - Elimination
H C O H
Oxidation
C O + H2
Aldehyde
mild
oxidation
Pr imary alcohol
strong
oxidation
Carboxylic acid
(CrO3 anhyd.) KMnO 4 / H
• CH 3CH 2 OH
Cu
573 K
CH 3CHO H 2
• CH3 2 CHOH
Cu
573 K
CH3COCH3 H 2
CH3
217
Brilliant STUDY CENTRE
Reactions of phenols
Electrophilic substitution reaction
1. Nitration
OH
OH
NO2
dil. HNO3 +
OH
O2N NO2
conc.HNO3
NO2
Picric acid
2. Halogenation
OH
OH
Br
Br2 in CS2 +
273 K
OH
Br
OH
Br Br
3Br2 in H2O
Br
218
Brain Pointer
3. Reimer-Tiemann reaction
OH
ONa ONa
OH CHO
CHO
CHCl2 NaOH H+
CHCl3 + aq. NaOH
Salicylaldehyde
Electrophile :CCl2 Dichlorocarbene
4. Kolbe’s reaction
ONa OH
OH
COOH
NaOH
1) CO2
2) H
OH
COOCH3
CH3OH/H+ Oil of winter green
Methyl salicylate
OH
OH COOC6H5
COOH C6H5OH/H+ Salol
Phenyl salicylate
O C CH3
219
Brilliant STUDY CENTRE
5. Reaction with Zn dust
OH
Zn dust
+ ZnO
6. Oxidation
OH O
Na 2 Cr2 O7 /H
O
Benzoquinone
• Colourless liquid
• Denaturation - process for making unfit for drinking mix with
methanol, pyridine and CuSO4.
Ether
1. Preparation
1. By dehydration of alcohols
220
Brain Pointer
2. Williamson’s synthesis
R O Na R X
R O R NaX
Order of reactivity of R–X : CH3–X > CH3CH2X > (CH3)2CHX >
(CH3)3CX
CH3 CH3 CH3
OH ONa
O R
NaOH R X
+ NaX
Physical properties
• Boiling point : lower than corresponding alcohols
• Lower members are soluble in H2O
Chemical reactions
1. Reaction with HX
• R O R HX
R X R OH
• R O R 2HX
2R X H 2 O
OH
O R
• + HX +R X
• CH 3 O CH 2 CH 3 HI
CH 3 I CH 3CH 2 OH
221
Brilliant STUDY CENTRE
CH3 CH3
CH3 CH3
OCH3 OCH3
Br
Br2 in +
CH3COOH
Br
OCH3 OCH3
NO2
H2SO4 + HNO3
+
OCH3
NO2
OCH3 OCH3
CH3
CH3Cl in anhy.AlCl3
+
CH3
OCH3 OCH
COCH3
CH3COCl in +
Anhyd.AlCl3
COCH3
222
Brain Pointer
CHAPTER - 12
ALDEHYDES AND KETONES
O O O
C R C H R C R
Carbonyl Aldehyde Ketone
group
Preparation
R CH2OH O
mild
R CHO R2 CHOH O
mild
R2 CO
10 Alcohol Aldehyde 20 Alcohol Ketone
Mild oxidising agent like PCC does not affect double bond
Catalytic dehydrogenation (Cu/573 K)
10 Alcohol
Aldehyde 20 Alcohol
Ketone
Ozonolysis
(1) O3
R CH CH R 2R CHO
(2) Zn/Acetic acid
R R R
(1) O3
R C C R 2R C O
(2) Zn/Acetic acid
Hydroboration
1) B2H6 / THF R
R C CH CO CH3
2) H2O2/OH
223
Brilliant STUDY CENTRE
Rosenmund Reduction
Pd
R CO Cl H2
BaSO
R CHO HCl
4
2R CO Cl R2Cd
R CO R CdCl2
1) AlH(i-Bu)2
2) H2O
1) RMgX/ether
R C N R CHO
2) H3O+
1) SnCl2 + HCl
2) ether
3) H2O
1) Di BAlH/195K
R COOR 2)H O
R CHO
2
Gattermann-Koch reaction
CO ,HCl
C6H6
anhy. AlCl , CuCl
C 6H5 CHO
3
Etards reaction
1) CrO2Cl2 / CS2
C6H6 CH3 C6H5 CHO
2 ) H3O
Oxo process
2 Co CO
R CH CH2 CO H2 8
pressure
R CH2 CH2 CHO
Wacker’s process
CuCl2
CH2 CH2 PdCl2 H2O
air or O
CH3 CHO
2
224
Brain Pointer
Physical properties
CO group is polar. B.P. is between hydrocarbon and alcohols
Chemical properties
C O , planar, mainly undergo nucleophilic addition
sp2
SO3H H+ shift
C O NaHSO3 C SO3Na
C
ONa
OH
Method of separation and purification water soluble
(degenerated by H+)
CN
C O HCN C
OH
1) RMgX
Aldehyde 20 Alcohol Formaldehyde
10 Alcohol
2 ) H3O
1) RMgX 0
Ketone 3 Alcohol
2 ) H3O
OR' OR'
Dry HCl R'OH
R CH H2O
RCHO + R'OH R CH
OH OR'
R R O CH2
CH2 OH
C O HCl C
CH2 OH O CH2
R R
Cyclic ketal
(pH 4) OH C N Z + H2O
C O H2N Z C
NHZ
225
Brilliant STUDY CENTRE
H H
Aldehyde 10 alcohol Ketone 20 Alcohol
Reducing agent Na/ethanol, H2/Pt, LiAlH4 etc
Convert C O to CH2
O
Aldehyde / Ketone Carboxylic acid
HNO3 or K 2Cr2O7 / H
mild oxidation
Aldehyde carboxylic acid
Tollen’s reagent - Ammoniacal AgNO3
Fehling solution - CuSO4 + Sodium potassium tartarate
Test for aldehydes and ketone
Tollen’s reagent - Silver mirror
Fehling solution - Blue red
2,4, DNP (both aldehyde and ketone) - orange ppt
Schiff reagent - pink colour
Aldol condensation (Aldehyde with H )
OH
dil. NaOH
2CH3 CHO CH3 CH CH2CHO
CH3 CH CH CHO
Crotonaldehyde
CH3
226
Brain Pointer
CH3
50 % NaOH
2C6H5CHO C6H5CH2OH C6H5COONa
Electrophilic substitution
CH3
OH
CH3CHO HCHO C CH2OH4 HCOO
CCl3 – CHO
does not undergo Cannizzaro reaction.
227
Brilliant STUDY CENTRE
CHAPTER - 13
CARBOXYLIC ACIDS
O O
C OH C OH
COOH
Oxalic acid Ethanedioic acid
COOH
COOH
CH2
Malonic acid Propanedioic acid
COOH
228
Brain Pointer
COOH
COOH
COOH
Phthalic acid Benzene-1,2-dicarboxylic acid
COOH
Structure
O O
O
C C
C
O H O H
O H
229
Brilliant STUDY CENTRE
Preparation of carboxylic acid
1. From 10 alcohols and aldehyde
1) Alk. KMnO4
R CH2 OH R COOH
2) H3O+
(strong oxidation)
R COOH
Tollens
R CHO
reagent
R COO
2. From alkylbenzene
CH3 COOH
[O]/
KMnO4/KOH/H3O+
CH2CH3 COOH
[O]/
KMnO4/KOH/H3O+ + CO2 + 2H2O
CH3
H3C C CH3
[O]
No reaction : due to absence of benzylic
hydrogen atom
230
Brain Pointer
O
H / OH
H / OH
R CN
H2O
R C NH2
R COOH NH3
O O O
dry ether H3 O
R Mg X C O R C O MgX R C OH Mg(OH) X
(s)
O O
R C Cl
H2O
R C OH Cl
1) OH/H2O
R COOH
+
2) H
RCO 2 O
H2O
2RCOOH
6. From esters
H+
RCOOH + ROH
O H2O
R C O R
OH
RCOO + ROH
H2O
Physical properties
Carboxylic acids having higher boiling point than aldehyde, ketone
and even alcohols due to the formation of dimer.
231
Brilliant STUDY CENTRE
O H O
C R
R C
O H O
Chemical reactions
Acidity
O O
R C OH H 2O R C O H 3O
O
R C Carboxylate ion resonance
stabilized
O
EWG EDG
232
Brain Pointer
OH
ortho effect
-I>+R OH
+R>-R
Formation of anhydride
2RCOOH
RCO 2 O H2 O
Esterification
O
H
R OH RCOOH R O C R H2O
PCl5
RCOCl + HCl + POCl3
PCl3
RCOOH RCOCl + H3PO3
SOCl2
RCOCl + SO2 + HCl
O
O
C
COONH4 C NH2
COOH
NH
2NH
3
Strong
heat C
COOH COONH4 C NH2
O
O
233
Brilliant STUDY CENTRE
3. Reactions involving – COOH group
1) Reduction
O
LiAlH4 / B2H6
R C OH H O
RCH2 OH
2
O
HI/Re d P
R C OH RCH3
2) Decarboxylation
CaO
RCOONa
NaOH,
R H Na2CO3
X2 in Re d P
R CH2 COOH
H O
R CH COOH
2
X halocarboxylic acid
COOH COOH
Br2/FeBr3
Br
Conc : HNO3
Conc : H2SO4
COOH
NO2
234
Brain Pointer
CHAPTER -14
NITROGEN COMPOUNDS
Structure
Hybridisation sp3
1° and 2° 107°
Bond angle
3° (CH3)3N 108°
Geometry Pyramidal
NH2
Aliphatic
Amines Arylamine
Aromatic
CH2NH2
Aralkylamine
235
Brilliant STUDY CENTRE
Preparation of amines
1. Reduction of nitro compounds
NH2
H2/Pd
NO2
NH2
Sn + HCl
or Zn + HCl
or Fe + HCl
NH2
SnCl2 + HCl
R NO 2
LiAlH 4
R NH 2
NO2
LiAlH4
Exception : N N
Azobenzene
Reduction of isonitrile
H 2/Ni
R NH CH 3
R NC
LiAlH 4
R NH CH 3
Reduction of amide
O
NH2 R CH 2 NH 2
1) LiAlH
R C 2) H 2 O
4
NH
1) KOH
2) R X
R NH 2
3) OH/ H 1 a min e
2KBr 2H 2 O K 2 CO3
237
Brilliant STUDY CENTRE
O
NH2
C NH2
NaOBr
+ Na2CO3
Reduction of oximes
LiAlH 4 R CH 2 NH 2 + H 2O
R CH N OH
H 2/Raney Ni
R CH 2 NH 2 + H 2O
Reduction of imines
R CH NH
LiAlH 4
or H 2 / Ni
R CH 2 NH 2
Physical properties
Methylamine and ethylamine are gases with fishy smell
Higher ones are liquids
Still higher ones are solids
Lower aliphatic amines are soluble in water.
As the number of carbon atoms increases, solubility decreases.
Alcohols are more soluble in H2O than corresponding amines as
O–H bond is more polar than N–H bond.
Boiling point
Higher boiling point than corresponding hydrocarbons due to the
presence of intermolecular hydrogen bonding in amines.
Among isomers, the order of boiling point is 1° > 2° > 3°.
Chemical properties
Basicity
Amines are more basic than ammonia due to the presence of electron
donating alkyl groups.
In pure state (gaseous phase), the basicity of amines follows the
order 3° > 2° > 1° > NH3
In aqueous phase, the order of boiling point is
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NH2
R NH 2
CH2 NH2
-I
R NH 2
NH2
O
R C NH2 <
NH2
N N N
H
H
OCH3 NO2
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Acylation
O O
Py
R NH2 + Cl C R R NH C R
HCl
NH C CH3
NH2 O O
+ CH3 C O C CH3
CH3COOH
Acetanilide
NH2 NH C Ph
O
+ Cl C Ph
NaOH
Benzanilide
(Schotten-Baumann reaction)
3° amine do not gives acylation reaction.
Carbylamine reaction
R NH 2 CHCl3
KOH
R NC + 3KCl + 3H O
1 a min e Carbyla min e 2
NH2 N2Cl
HNO2
0 - 5°C
(Diazotisation)
Aryl 1° Benzene diazonium
chloride
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2° amine
R 2 NH HNO2
R 2 N NO
N Nitroso a min e
( yellow oily liquid)
3° amine
R 3 N
HNO 2
R 3 N H O NO
Aliphatic 3 Nitrite salt
CH3
CH3 CH3
N CH3 N
HNO2
Aryl 3°
NO
Green liquid
O
R NH2 NaOH
Ph S NH R Soluble
1°
SOCl2 SO2Cl O
O
R2NH NaOH Insoluble
Ph S NR2
2°
CH3 O
Hinsberg reagent
R3N
No reaction
3°
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Electrophilic substitution reaction
Bromination
NH2
Br Br
Br2/H2O
+ 3HBr
NH2
Br O
NHCOCH3 NH2
NH C CH3
(CH3CO)2O Br2
CH 3COOH
H 3O
Py
Br Br
Major
Nitration
NH2 NH2
NH2
(CH3CO)2O
H 3O
con.HNO3
con.H 2SO4
Py
NO2 NO2
Major
Sulphonation
con.H 2SO 4
SO3H SO3
Sulphanilic acid Zwitter ion
Friedel-Craft’s reaction
Aniline donot gives Friedel-Craft’s reaction due to the salt formation
reaction between aniline and AlCl3.
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Diazonium salt
Benzene diazonium salt is prepared by diazotisation
It is stable than alkane diazonium salt due to resonance.
Reactions
Cl
Cu2Cl2/HCl
Br
Cu2Br2/HCl Sandmeyer's reaction
CN
CuCN/KCN
Cl
Cu/HCl
Gatterman reaction
N2Cl Br
Cu/HBr
KI
F
H3PO2 + H2O
C2H5OH
NO2
1) HBF4
2) NaNO2/Cu,
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Coupling reaction
N2Cl OH OH
+ H OH N N
p - hydroxyazobenzene
(orange dye)
p - aminoazobenzene
(yellow dye)
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CHAPTER -15
BIOMOLECULES
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Cyclic structure of glucose
Pyran
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Furan
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Maltose
1. Maltose is composed of two D -glucose units in which Cl of one
glucose (I) is linked to C4 of another glucose unit (II).
2. The free aldehyde group can be produced at C1 of second glucose
in solution and it shows reducing properties so it is a reducing sugar.
Maltose
H 2O
Glu cos e Glu cos e
C1 C4
Lactose
H 2O
Glucose + Glucose
C4 C1
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R CH COOH
NH2
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Where R-Any side chain
Most naturally occurring amino acids have L-configuration.
COOH COOH
H NH2 [D] H2N H [L]
R R
R1 R2
O
H2 N CH C NH CH COOH
R2 R2
Peptide linkage
Primary structure of proteins : The sequence of amino acids is
said to be the primary structure of a protein.
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• Quaternary structure of proteins:
1. Some of the proteins are composed of two or more polypeptide chains
referred to as sub-units.
2. The spatial arrangement of these subunits with respect to each other
is known as quarternary structure of proteins.
• Denaturation of proteins:
1. The loss of biological activity of proteins when a protein in its native
form, is subjected to physical change like change in temprature or
chemical change like change in pH. This is called denaturation of
protein.
Example : Coagulation of egg white on boiling, curdling of milk.
Nucleoside:
1. Base + Sugar
5'
HO H2C O Base
4' 1'
HH HH
3' 2'
OH OH
Nucleotide:
1. Base + Sugar + phosphate group
O
5'
O P O H2C O Base
O 4' 1'
HH HH
3' 2'
OH OH
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ii. Example : Vitamin C, B group vitamins.
2. Fat soluble vitamins
i) These vitamins are soluble in fat and oils but insoluble in water.
ii) They are stored in liver and adipose (fat storing) tissues.
iii) Example : Vitamin A, D, E and K
HORMONES
A hormone is a secretion of ductless gland. They are a group of
biomolecules which are produced in the ductless (endocrine) glands
and are carried to the different parts of the physiological activity which
may be inhibitory or stimulatory. They are needed only in very small
quantities and are not stored in the body.
Steroid hormones : Testosterone, dihydrotestosterone, endrogens,
estrogen.
Peptide hormones : Oxytocin, Vasopressin, Insulin, Angiotensin.
Amine hormone : Adrenaline, Thyroid hormones.
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CHAPTER - 16
POLYMERS
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W e ig ht average n i M i2
Mw
m olecular m ass n iM i
Mw
P DI
Poly dispersity index Mn
PD I = 1 for natural polym ers
(PD I)
PD I > 1 for synthetic p olym ers
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SOME IMPORTANT ADDITION POLYMERS
1. LDPE
Monomer : Ethene
Structure : CH CH2
n
Cl
Properties : Linear, thermoplastic, can be easily moulded.
Uses : For making rain coats, hand bag, pipes, toys, electrical
insulators, vinyl flooring etc
6. Polytetrafluoro ethylene (PTFE or Teflon)
Monomer : Tetra fluoro Ethylene
Structure : CH CH2
n
CN
Propeties : Linear, fibre, hard, high melting point
Uses : Substituent of wool. Used for making blankets and
synthetic carpets.
8. Poly Methyl Meta Acrylate (PMMA) or plexi glass or perspex or
leucite
Monomer : Methyl meta acrylate
CH3
Structure : CH2 C
COOCH3
n
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Uses : For making lenses, air craft window, transparent domes etc.
9. Natural rubber
Monomer : 2-methyl-1,3-butadiene (isoprene)
CH2 CH2
C C
Structure :
CH3 H
Properties : Natural, linear, amorphous
10. Neoprene rubber
Monomer : 2-chloro-1,3-butadiene (chloroprene)
CH2 C CH CH2
Structure :
Cl
n
Properties : Vegetable oil and mineral oil resistant
Uses : For making conveyor belt, gaskets, stroppers, hoses, printer
rollers etc.
11. Buna-S (Styrene butadiene rubber -SBR)
Monomers :
(a) 1, 3-butadiene
(b) Styrene
(3 : 1 ratio in presence of sodium)
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CN n
Properties : Petrol and organic solvent resistant
Uses : Used for making oil seal, adhesives, tank lining etc.
SOME IMPORTANT CONDENSATION POLYMERS
1. Terylene or Dacron
Monomers : a) Ethylene glycol (b) Terephthalic acid
O O
O O
O CH2 CH2 O C C
Structure :
n
O O
O O
Structure : C (CH2)5 NH
n
Properties : Fibre, high tensile strength, high modulus
Uses : For making fabrics, ropes and tyre cord.
6. Novolac
Monomers : a) Phenol b) Formaldehyde (Linear condensation
polymer)
OH OH OH
CH2 CH2 CH2
Structure :
Properties : Linear
Uses : Used in paints
7. Bakelite :
Monomers : (a) Phenol (b) formaldehyde (cross linked or network
polymer)
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OH OH OH
CH2 CH2 CH2
Structure :
OH OH OH
HN N NHCH2
Structure :
N N
NH
NH CO NH CH2
Structure :
n
Properties : Cross linked or network polymer, rigid, hard, brittle
Uses : For making unbreakable cups and laminated sheets.
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CHAPTER - 17
CHEMISTRY IN EVERYDAY LIFE
Drugs:
Analgesics
Relieve or decreases the pain without causing unconsciousness.
There are also known as “Pain Killers”.
Aspirin, Analgin, Seridon etc
Tranquilizers/Antidepressants
These are used for treatment of mental diseases.
Equanil, Calmpose, Tofranil, Barbituric acid, Cocaine and iproniazids
etc.
Antiseptics
There are applied on living tissues to kill or prevent the growth of
micro-organisms. Dettol, Savlon and Acriflavin etc.
Disinfectants
These are applied on floor, instruments or wall etc, to kill
microorganisms but are not safe for application on living tissues.
Phenol (0.2 % phenol act as antiseptic and 1% phenol act as
disinfectant).
Antimicrobial
These are use to either kill (bactericidal) or stop the growth of diseases
causing microorganisms (bacteriostatic)
Salvarsan, Prontosil, Sulphanilamide.
Bacteriostatic Drugs : Erythromycin, Tetracycline, Chloramphenicol
Bacterial Drugs : Ofloxacin, Amnoglycosides
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Antipyretics
These drugs bring down the body temperature during fever.
Paracetamol, Analgin and Novalgin.
Antifertility Drugs
Prevent pregnancy in women by controlling menstrual cycle and
ovulation.
Norethindrone & Mestranol
Antacids : Used for the treatment of acidity.
Metal hydroxides are generally used as antacids.
Eno & Milk of magnesia [Mg(OH)2]
Antibiotics
These are the chemical substances which are produced by micro-
organisms like bacteria and fungi and are able to kill or stop the growth
of pathogenic microorganisms.
Penicillin, Amoxicillin and Ampicillin
Antihistamins : These drugs compete with histamine for finding sites
of receptors and thus interfere with the natural action of histamine.
Brompheniramine & Terfenadine
Artificial Sweetening Agents
Sucrose and fructose are the most widely used natural sweeteners.
But their intake increases calories in the diet and excess of them
can cause tooth decay. Ortho-sulphobenzimide, also called
saccharin, is the first popular artificial sweetening agent. It is about
550 times as sweet as cane sugar. It appears to be entirely inert and
harmless when taken. Its used is of greater value of diabetic persons
and people who need to control intake of calories.
Aspartame : Aspartame is the most successful and widely used
artificial sweetener, it is roughly 100 times as sweet as cane sugar.
It is methyl ester of dipeptide formed from aspartic acid and
phenylalanine. Use of aspartame is limited to cold foods and soft
drinks because it is unstable at cooking temperature. Sucralose is
trichloro derivative of sucrose. Its appearance and taste are like sugar.
It is stable at cooking temperature, it does not provide calories.
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Food preservatives:
These are the chemical substances which prevent undesirable
changes in flavor, colour, texture of the food during processing and
storage of food. Examples, Table salt, sugar, vegetable oils, sodium
benzoate (C6H5COONa) etc
Cleansing Agents
Soaps : Sodium or potassium salts of fatty acids.
Soaps do not work with hard water as it forms insoluble salt with
calcium and magnesium ions present in hard water.
Detergents : Sodium or potassium salts of sulphonic acids. These
can work with hard water also.
Anionic Detergents : Sodium salts of sulphonated long chain
alcohols or hydrocarbons.
Cationic Detergents : Quaternary ammonium salts of ammines
with acetates, chlorates or bromates.
Non-ionic Detergents : They do not contain any ion in their
constitution.
One such detergent is formed when stearic acid reacts with
polyethylene glycol. Liquid dishwashing detergents are non-ionic type.
Mechanism of cleansing action of this type of detergents is the same
as that of soaps.
Advantages of synthetic detergents over soaps
They can be used with hard water which soap cannot do
They can be used in acidic medium unlike soaps
They are more soluble in water so form better latte than soaps.
They have stronger cleaning action than soaps.
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BOTANY
CHAPTER - 01
REPRODUCTION IN ORGANISMS
Types of Reproduction
(Based on organisms habitat, its internal physiology etc.)
* With or without the * From any plant part * Involves gamete formation
involvement of other than seeds. and syngamy
gamete formation
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Vegetative propagules
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Sexual Reproduction
3 Phases
Oestrus cycle - eg. cow, sheep, rat, deer, dogs, tiger etc.
Syngamy Embryogenesis
Gametogenesis Gamete transfer
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Pre-fertilization Events
1. Gametogenesis - formation of gametes
Antherozoids / Sperm
Heterogametes
eg. Fucus
Human beings Egg / Ovum
Staminate
Unisexual flower
Pistillate
Unisexual
Animals eg. Cockroach
Bisexual / Hermaphrodites
eg. Earthworm, Sponge, Tape worm, Leech
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2) Gamete Transfer
In majority organisms - male gametes are motile
In some Fungi and Algae - both gametes are motile
In Algae, Bryophytes and Pteridophytes - Water is the medium
for gamete transfer
In Gymnosperms and Angiosperms (seed plants)
- Pollen grains are the carriers of male gametes, and transfer
through a mechanism called Pollination
II. Fertilization (Syngamy)
Exernal.
Eg. Majority of Algae, Fishes, Amphibians
Internal.
Eg. Fungus, Bryophytes, Pteridophytes,
Gymnosperms, Angiosperms, Higher animals
such as Reptiles, Birds and Mammals
Animals
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CHAPTER - 02
SEXUAL REPRODUCTION IN FLOWERING PLANTS
Calyx - sepals
Non-essential whorls
Corolla - Petals
Flower
Androecium - Stamens
Essential whorls
Gynoecium - Carpels
Anther
Stamens
Filament
Epidermis
Protection and
Endothecium dehiscence of
Anther walls
anther
Middle layers
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meiosis
Sporogenous Pollen mother cell Pollen tetrad
tissue (2n) (2n) (n)
Pollen grains
(n)
Pollen grains
Sporopollenin - Exine
(Not continuous due to germpore)
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Rice, Wheat
(lose viability within 30 minutes)
Pollen Viability
Stigma
Pistil Style
Ovary
Gynoecium Composed of
Carpels
One Many
Monocarpellary Multicarpellary
Eg: Pea
Free United
Apocarpous Syncarpous
eg : Michelia eg : Hibiscus,
Papaver
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Megasporangium / Ovule
Nucellus Meiosis
Archesporial Megaspore 4 megaspores (n)
(2n) cell (2n) mother cell
(2n)
3 degenerates
One functional
megaspore
(n)
1st 2nd
mitosis mitosis
Functional 2-nucleate 4 nucleate
megaspore embryosac embryosac
(n) 3rd
mitosis
8 nucleate and
7 celled embryosac
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Embryosac / Female gametophyte (3+2+3)
Embryosac
One egg (n)
Egg apparatus
(at micropylar end)
2 synergids (n)
2 polar nuclei (n) in central cell
Pollination
Biotic Insects
agents
Wind
Abiotic
agents
Water
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Pollen release and stigma receptivity not synchronized.
Anther and stigma are placed at different position
Self-incompatibility
Production of unisexual flowers (dioecy)
Pollen-pistil interaction
All the events from pollen deposition on to the stigma untill the pollen
tube enters the ovule.
Artificial Hybridisation
Rebagging
II DOUBLE FERTILIZATION
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Mature
embryo
outer testa
Seed coat
Seeds
Albuminous Non-albuminous/
(with endosperm) Ex-albuminous
(without endosperm)
Eg: Wheat, Maize,
Barley, Castor Eg: Pea, Groundnut,Gram
Fruit
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Parthenocarpic fruits
Fruits develop without fertilisation.
Oldest viable seeds
Lupinus arcticus - 10,000 years of dormancy
Phoenix dactylifera - 2000 years of dormancy
Apomixis - Production of seeds without fertilization.
Eg: Some species of Asteraceae, Grasses
Apomictic seeds does not show any segregation due to the absence
of meiosis.
Polyembryony - Occurrence of more than one embryo in a seed.
Eg: Citrus, Orange, Mango
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CHAPTER - 03
STRATEGIES FOR ENHANCEMENT IN
FOOD PRODUCTION
PLANT BREEDING
¨ Purposeful manipulation of plant species to produce desired plant
types with ;
a) Increased yield and improved quality
b) Increased tolerance to environmental stresses
c) Resistance to pathogens and insect pests
Steps in plant breeding
1. Collection of variability (Germplasm collection)
¨ Entire collection of plants / seeds having all the diverse alleles for
all genes in a given crop.
2. Evaluation and selection of parents
¨ To identify plants with desirable combination of characters\
3. Cross hybridisation among the selected parents
¨ Steps ;
1. Emasculation
2. Bagging
3. Pollen dusting (artificial pollination)
4. Re-bagging
5. Tagging
4. Selection and testing of superior recombinants
¨ It yields plants that are superior to both of the parents
5. Testing, release and commercialisation of new cultivar
¨ The new hybrids are evaluated for their yield and other agronomic
traits before releasing.
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Green revolution : Drastic increase in food production during
1960s due to the invention of new hybrid
varieties.
Some hybrid crops of high yielding varieties
1. Hybrid Rice
(i) IR-8 IRRI, Philippines
(ii) TN - I Taiwan
(iii) Jaya and Ratna developed in India
2. Hybrid wheat
(i) Sonalika
(ii) Kalyan Sona
3. Hybrid Sugarcane
Saccharum barberi × Saccharum officinarum
(Weak stem, low sugar content, (Thick stem,
grown in North India) high sugar content,
grown in South India)
Interspecific hybrid sugarcane
Parbhani Kranti
(Resistant to Yellow Mosaic Virus;
It is not a mutant variety)
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CHAPTER - 04
BIOTECHNOLOGY : PRINCIPLES AND PROCESSES
Biotechnology
Old biotechnology
conventional method
based on inherent abilty
of microorganisms.
Eg: Making curd,
bread or wine
Modern biotechnology
manipulation of genome
for getting desirable
products
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A) Endonuclease
Naming
• First letter from genus, second two letters comes from species, fourth
letter indicates strain and Roman numerals indicate order in which
the enzymes were isolated.
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B) Ligases
• Sticky ends can be joined by forming hydrogen bonds, which triggers
enzyme ligase.
• Ligase form phosphodiester bonds and joins DNA.
• Hence known as Molecular glues.
C) Exonuclease
They cut DNA at its extreme ends.
2) VECTOR
Vectors are DNA molecules that helps in carrying and integrating the
desired gene.
Two types;
Cloning Vector
• Artificially constricted vectors.
• Used for multiplication of foreign gene.
• Eg: pBR322, pUC 8
Features of cloning vector
1) Origin of replication (ori) - The sequence from where replication
starts and any piece of DNA when linked to this sequence can be
made to replicate within the host cells.
2) Selectable marker - Help in identifying and eliminating non-
transformants and permitting the growth of transformants.
Eg: AmpR gene and TetR gene in pBR322
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3) Cloning sites
To link the foreign DNA
Several; cloning sites for different restriction enzymes.
Expression Vector
• Natural vectors
• Used for inserting foreign DNA into host.
Eg: Ti plasmid of Agrobacterium tumifaciens.
4) HOST
Host is a cell/organism in which foreign DNA is expressed.
STEPS IN rDNA TECHNOLOGY
1) Identification of desirable genes
2) Isolation of foreign gene
3) Amplification of foreign gene
4) Insertion of foreign gene
5) Screening of transformed cells
6) Obtaining gene products
7) Down stream process
1) Isolation of foreign gene- DNA is isolated and purified by using
different enzymes based on the organisms used.
To digest the boundaries of different cell types :
Bacterial cell - Lysozyme
Fungal cell - Chitinase
Plant cell - Cellulase, hemicellulase
To avoid RNA and proteins for getting purified DNA :
RNA - RNAse / Ribonuclease
Proteins - Protease
• Separated DNA can be precipitated by adding chilled ethanol.
• DNA that separated out can be removed by spooling.
• Cutting of DNA at specific locations by restriction endonucleases
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Gel Electrophoresis
Restriction digested fragments of DNA is separated by gel
electrophoresis.
DNA fragments are separated according to their size through the
sieving effect provided by agarose gel. When electric current passes
‘-’vely charged DNA starts to move from -ve wells to +vely charged
electrode. Smaller fragments occupy near to +ve electrode and larger
fragments occupy near to -ve electrode Ethidium bromide stained
separated fragments can be visualised under UV light. The extraction
of DNA from gel is called Elution.
Southern Blotting
Transferring of separated DNA from gel to nitrocellulose paper is called
blotting.
Hybridisation with radiolabelled probe
ssDNA complementary to the gene of interest is used to identify it by
hybridisation.
Polymerase Chain Reaction (PCR)
Discovered by Karry Mullis
Amplification of DNA
Three steps,
Denaturation - Separating dsDNA into ssDNA by applying high
temperature.
Annealing - Primers complementary to 5’ and 3’ ends will come and
bind with DNA for initiating replication.
Extension/Elongation - DNA is elongated and forms new strands
by the action of enzyme Taq polymerase.
Requirements
• Template DNA DNA to be amplified
• Primers small chemically synthesized oligonucleotides.
• dNTPs (de-oxynucleotide triphosphates) dATP, dGTP, dTTP
and dCTP
• Taq DNA polymerase from thermophilic bacteria Thermus
aquaticus, which can withstand high temperature during
denaturation.
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Chemical Treatment
Particularly in bacteria
Microinjection
Particularly in plants
• Microbes Plasmids
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Obtaining foreign gene product
• pH control system
• Sampling port
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CHAPTER - 05
BIOTECHNOLOGY AND ITS APPLICATION
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Insects
Ingestion
Bt crops
Midgut
Inactive protoxin
Alkaline pH Midgut
Toxin
Create pores
Death of insect
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A Chain B Chain
Joined by
disulphide linkage
Human Insulin
[Humulin]
Retroviral vector
Lymphocytes with ADA genes
Returned to Patient
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Molecular Diagnosis
used for early detection of diseases
It includes Recombinant DNA technology, PCR, ELISA, etc....
PCR early detection of the presence of a pathogen by amplifying their
nucleic acids.
Autoradiography A single stranded DNA or RNA tagged with a
radioactive probe is allowed to hybridise to its complementary DNA
and detect its presence by autoradiography.
ELISA - Based on the principle of antigen-antibody interaction.
TRANSGENIC ANIMALS
Animals with manipulated DNA for expressing an extra character.
They are used for studying
Normal physiology and development
Study of disease
Biological products
Vaccine safety
Chemical safety testing
Ethical Issues
Genetic Engineering Approval Committee will make decisions regarding
the validity of GM research.
Biopiracy - Unauthorised use of bioresources by multinational companies.
Eg. An American Company, got patent for Indian Basmati rice
Biopatent - Laws to prevent unauthorised exploitation of Bioresources
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CHAPTER - 06
ORGANISM AND POPULATIONS
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Major biomes of India
A) Tropical rain forest B) Deciduous forest
C) Desert D) Sea coast
Major abiotic factors
1. Temperature
Affect enzyme kinetics
Control geographical distribution of organisms
A) Eurythermal - Organism tolerate wide temperature differences
B) Stenothermal - Organism tolerate narrow range of temperature
differences
2. Water
Control productivity and distribution of plants
Chemical composition, pH and Salinity are important for aquatic
organisms
A) Euryhaline - Organism overcome large salinity variations
B) Stenohaline - Organism tolerate narrow salinity differences
3. Light
Quality, intensity and duration of light control daily rhythms in
organisms like photoperiodism, photosynthesis etc. in plants and
foraging, reproductive and migratory activities in animals.
4. Soil
Soil composition, grain size and aggregation determines the
percolation and water holding capacity of soil. These characteristics
and pH, mineral composition and topography determines the
vegetation in the soil.
Responses to Abiotic factors
Homeostasis : Maintenance of constant internal environment
1. Regulate : Organisms able to maintain homeostasis, so they are
more successful to live in any conditions.
Eg. Birds and Mammals
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Animal adaptations
To cold (Low temperature)
1. Allen’s rule - Mammals from colder climate generally have shorter
ears and limbs
2. Blubber - Thick fat deposition below skin in polar seal
To high temperature (Desert)
Eg. Kangaroo rat
Excrete concentrated urine
Internal fat oxidation for water requirement
Adaptation in Humans : In high altitude with low oxygen availability.
Increase RBC production
Decreasing binding affinity of haemoglobin
Increase breathing rate
Hot springs : Eg. Archaebacteria
Deep ocean with high pressure : Organism with special proteins and
enzyme
Behavioural adaptations
Desert lizard : Bask in sun
Move into shades / Burrowing in soil
Population : Group of individuals of same species in an area.
Population attributes
I. Population growth : Increase in size or number of individuals of a
population.
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Pre-reproductive
Reproductive
Post reproductive
A - Natality (B)
B - Mortality (D)
C - Immigration (I)
D - Emigration (E)
DE N B I
Decreases Increases
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V. Population growth models
Logistic growth
Exponential growth
Verhulst - Pearl logistic growth
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1. Predation
Predator (+) (Either herbivore or carnivore) Prey (-)
Role of predation
Transfer of energy across trophic level
Control prey populations. Eg. Prickly pear cactus and moth
Biological control of agricultural pest
Maintaining species diversity. Eg. Starfish Pisaster and Invertebrates
Defence to lessen the impact of predation
Animals
Camouflage - Insects and frog
Poisonous - Monarch butterfly
Plants
Thorns - Acacia, Cactus
Poisonous - Calotropis
Chemicals - Nicotine, Caffeine, Quinine, Opium, Strychnine
(Secondary metabolites with ecological importance)
2. Competition (– / –)
Intraspecific
Interspecific
Occurs between closely related species when the resources are
limiting
A) Unrelated species also compete
Eg. Flamingoes & Fish - Zooplankton
B) Also occurs in presence of plenty of resources when efficiency
of one is more than other.
Eg. Abingdon tortoise and Goat
Gause’s competitive exclusion principle
Two closely related species competing for same resources cannot
co-exist and superior species will eventually eliminate the other
species.
Competitive release
A species whose distribution is restricted to a small geographical
area because of the presence of superior species.
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Competitive co-existence
Two competing species avoid competition by resource partioning
such as changing feeding and foraging time and patterns.
Eg. Mac Arthurs observation in warblers
3. Parasitism
Parasite (+) Host (-)
Ectoparasite :- Lice on Humans
Ticks on dogs
Copepods on marine fishes
Cuscuta on hedge plants
Endoparasite :- Liverfluke, Plasmodium
Brood parasitism :- Cow and Cuckoo
Adaptation of parasite
Loss of unnecessary sense organs
Loss of digestive system
Sucker or adhesive organs
High reproductive capacity
4. Commensalism (+ / 0)
Eg. Epiphyte(+) on a tree (0)
(Orchid (+) on a mango branch(0))
Barnacles (+) on the back of a whale (0)
Clown fish (+) and sea anemone (0)
Cattle egret (+) and grazing cattle (0)
5. Mutualism (+ / +)
Eg. Lichen - Algae and Fungi
Mycorrhiza - Fungi and roots of higher plants
Rhizobium - Root nodules of legumes
Plant - Pollinator mutualism
(Fig tree and Wasp bee)
Mediterranean Orchid Ophrys and bee - Sexual deceit
Orchid petals - Mimicry
Male bee - Psuedocopulation
6. Ammensalism (– / 0)
Eg. Penicillium - Streptococcus
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CHAPTER - 07
ECOSYSTEM
Types of Ecosystem
Natural Man-made
Crop field
Aquarium etc
Terrestrial Aquatic
Forest Pond
Desert Lake
Grass land etc River
Estuaries
Wetland etc
Components of ecosystem
Producers Plants
Primary consumer
Biotic Consumers
Secondary consumer
Decomposers Bacteria, Fungi
Abiotic Light, Temp, Soil, Water etc
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Structure of ecosystem
• Species composition
• Stratification - Vertical layering of organisms
• Trophic structure
Functions of ecosystem
• Productivity
• Decomposition
• Energy flow
• Nutrient cycling
Productivity
• Rate of biomass production in terms of weight or energy captured.
• Unit : gm-2yr-1 or (KCal m-2)yr -1
• Productivity
Primary Secondary
(Producer level) (Consumer level)
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Catabolism
Humification
Some of the fragmented detritus accumulate into dark coloured
amorphous substances called Humus.
Humus :
• Dark coloured, amorphous
• Partially decomposed organic substance
• Highly resistant to microbial action, so slow rate of decomposition.
• Reservoir of nutrients
Mineralisation
Humus inorganic substances like CO2, H2O, nutrients etc.
Factors affecting decomposition
• Chemical composition of detritus
• Climatic factors like temperature, soil moisture, presence of oxygen
etc.
Energy flow
• Unidirectional
• Sun Producers Herbivores Carnivores
• Energy goes on decreasing with each and every trophic level
Food chain
Types of food chain
Grazing /Predator food chain/ (GFC)
• Starting from producers
• Source of energy sun light.
Detritus food chain /(DFC)
• Starting from detritus
• Source of energy dead organic matter
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Food web - Interconnected food chains.
Trophic structure / Level
A specific place of organism in food chain based on source of food.
Standing crop
Mass of total living material in each trophic level at a particular time.
Standing state
Amount of nutrients present in the soil at any given time.
Ecological Pyramids
Graphic representation of different trophic level in an ecosystem with
producer at base.
Types of ecological pyramid
Pyramid of Number
Upright - Forest, Pond
Inverted - Tree as an ecosystem
Spindle - Tree as an ecosystem
Pyramid of Biomass
Upright - Forest, Grass land
Inverted - Deep ocean
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Pyramid of Energy
Always upright
Nutrient cycling/ Biogeochemical cycles
Gaseous Sedimentary
Reservoir is Reservoir is
atmosphere/ soil
water
Eg: C, N Eg: S, P
Carbon Cycle
Phosphrous Cycle
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Ecological Succession
Gradual and fairly predictable changes in species composition of a
given area.
Pioneer Community
Xerarch - Lichen
Hydrarch - Phytoplankton
Seral Community
Intermediate communities
Eg: - Submerged plant stage
Moss, Herb stage etc.
Climax community / Stable community
Forest (Mesic water condition)
Primary Succession
Eg: Succession on bare rock, pond, newly cooled lava.
Secondary Succession
Eg: After forest fire
• Xerarch - Succession on terrestrial area.
• Hydrarch - Succession on water body
Phytoplankton stage Submerged plant stage Submerged free
floating plant stage Reed-swamp stage Marsh meadow stage
Scrub stage Forest.
Ecosystem Services
• Soil formation (50%)
• Recreation (10%)
• Nutrient cycling (10%)
• Climate regulation (6%)
• Habitat for wildlife (6%) etc
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CHAPTER - 08
ENVIRONMENTAL ISSUES
Pollution
Undesirable change in physical, chemical / biological characteristics
of air, land, water / soil.
Pollutants - Agents of pollution
Types of Pollution
I. Air pollution and its control
A) Agents - Thermal power plants, smelters and other industries.
B) Pollutants - gaseous and particulate matter (2.5 micrometers
or less in diameter)
C) Control of Air pollution
Control of particulate matter - use of electrostatic
precipitator
Control of gaseous pollutants - Scrubbers, catalytic
converters
D) Effects of air pollution
Breathing and respiratory symptoms
Irritation, Inflammations and damage to the lungs and
premature death.
II. Noise pollution
(Noise pollution include as an air pollution, came into force in 1981)
A) Agents - High sound level greater than 150 dB/more considered
as noise agents.
B) Control of noise pollution
Use of sound absorbent materials / by muffling noise
Stringent following of Laws.
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C) Effects of noise pollution
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Causes of algal bloom
2. Increase BOD
3. Decrease DO
Eg. DDT
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e-waste Electronic wastes
Effects Accumulation of garbage in cities, polluting underground
water resources by land fills.
Controlling Recycling
Sanitary landfills
Incineration (Hospital waste)
Reduction in use of plastics
Use of Eco friendly packaging
Case study of Remedy for plastic waste Bangalore
Ahmed Khan recycled the plastic into a new form called poly
blend
It is used to lay roads
V. Agro-chemical and their Effects
Green revolution enhance use of inorganic fertilisers and pesticides.
This leads to biomagnification in terrestrial ecosystem
Case study of organic farming [by Ramesh Chandra Dagar, a
farmer in Sonipat, Haryana]
It is a cyclical, zero waste management
Maximum utilisation of resources
VI. Radio Active Wastes
Nuclear energy has two serious problems.
Accidental leakage (Three mile Island & Chernobyl)
Safe disposal of radioactive waste
Controls
Proper storage of nuclear waste and Sufficient Pre-treatment
Effects
It causes mutations
Cancer
High doses may be lethal
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Effects
Global warming
Increase sea level (Melting of polar ice caps)
Odd climatic change (El-nino effect)
Controls
Cutting down use of fossil fuel
Improving efficiency of energy usage
Reducing deforestation
Planting tree
Slowing down growth of human population
Reduce green house gas emissions
Ozone depletion
Ozone found in stratosphere as a shield against UV
Unit of ozone layer thickness - Dobson units (DU)
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Ozone depleting substances - CFCs
Ozone Hole
Reduction in thickness of ozone layer
Reported in Antartica
After Effect
More UV radiation reaching to earth surface
Ageing of skin, skin cancer
Snow - blindness (Inflammation of cornea)
Cataract
UV-B damage DNA and cause mutation
Control
Reduce emission of ozone depleting substances
Montreal Protocol - 1987 (1989)
Montreal - Canada
Degradation by improper resource utilization and maintenance
Soil erosion and desertification
Water logging and soil salinity
Defforestation
Reason
Slash and burn agriculture (Jhum cultivation)
Industrialisation and urbanisation
Forest fire
After effect
Enhanced CO2 concentration
Loss of biodiversity
Disturbed hydrological cycle
Soil erosion
Desertification
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Control
Reforestation
Case study of People’s participation in conservation of Forest
Additional Informations
Abbreviations
PM - Particulate matter
DO - Dissolved Oxygen
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DU - Dobson units
Important Dates
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ZOOLOGY
CHAPTER - 01
HUMAN REPRODUCTION
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Interstitial spaces contain Leydig cells (Interstitial cells) &
immunologically competent cells
Leydig cells produce androgens (Testosterone is the major
androgen).
Immunologically competent cells include macrophages, mast cells
and T-lymphocytes etc.
2. Male sex accessory ducts- It includes rete testis, vasa efferentia,
epididymis, vas deferens etc.
The correct sequence of sperm movement in the male reproductive
tract is seminiferous tubule rete testis vasa
efferentia epididymis ejaculatory duct urethra penis.
Epididymis locates along the posterior surface of each testis. The
function of the epididymis is maturation, motility and storage of
sperms.
The distal end of vas deferens receives a duct from the seminal vesicle
to form ejaculatory duct, and it opens into the urethra
In male urethra acts as urinogenital duct. The urethra originates from
the urinary bladder and extends through the penis and its external
opening is called urethral meatus.
3. Male sex accessory glands:-It includes a pair of seminal vesicles,
prostate gland(unpaired) and a pair of bulbourethral glands(Cowper’s
glands).
The secretions of accessory sex glands constitute seminal plasma,
which is rich in fructose, calcium and certain enzymes
Semen = sperms (about 10%) + seminal plasma ( about 90%)
Seminal vesicles contribute about 60 to 70% of seminal plasma, while
prostate gland contributes about 20 to 30% of seminal plasma
Secretion of bulbourethral glands lubricates penis.
4. Male external genitalia/Penis/male copulatory organ- It is made
up of special erectile tissue that helps in erection of the penis to
facilitate insemination
The enlarged end of penis is called glans penis and is covered by a
loose fold of skin called foreskin (prepuce)
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Labia minora:-The thin fleshy paired folds of tissue seen under the
labia majora.
Clitoris:-An erectile tiny finger like structure which lies at the upper
junction of the two labia minora above the urethral opening.
Stimulation of clitoris helps in achieving orgasm (climax of sexual
excitement).
Spermatogenesis:-
Some of the spermatogonia (2n) grow in size and change into primary
spermatocytes (2n).
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FSH acts on Sertoli cells and stimulate the secretion of some factors
such as ABP (Androgen Binding Protein), and Inhibin etc, which help
in spermiogenesis
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Structure of a Spermatozoa: -
Human sperm shows a head, short neck, a middle piece and a tail.
A plasma membrane covers the whole body of sperm
The sperm head contains a haploid nucleus which contains the genetic
material - DNA
A cap like structure called acrosome, is present at the anterior end of
sperm head and it is filled with enzymes that help in fertilisation of
ovum by dissolving the egg membranes
Middle piece contains spirally arranged mitochondria (power station)
The sperm moves by the lashing movement of its tail
A human male releases about 200 to 300 million of sperms during a
single ejaculation.
For normal fertility at least 60 % of sperms must have normal shape
and size and at least 40 % of them must show vigorous motility.
The survival of sperms depend upon their motility.
Normal viability of sperms in female genital tract is about 48 hours
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A Human female foetus shows about two million oogonia in each ovary.
(oogonia are formed through mitotic division. (oogonium - s).
( four million oogonia are formed in both ovaries)
No more oogonia are added or formed after birth.
Some of these diploid oogonia start meiotic division and enter into
prophase I and suspended at that stage. (Hereafter known as primary
oocytes)
Each primary oocyte then gets surrounded by a layer of granulosa
cells (follicular cells) and is called the primary follicle (primary
ovarian follicle)
A large number of primary follicles degenerate during the phase from
birth to puberty. (follicular atresia)
Therefore, at puberty only about 60,000-80,000 primary follicles
are left in each ovary. (about 1.2 lakhs to 1.4 lakhs in both ovaries)
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During puberty, by the action of gonadotropins, the primary follicles
get surrounded by more layers of granulosa cells and a theca layer
there after known as secondary follicles.
The secondary follicle changes into tertiary follicle by adding more
granulosa cells and it shows a fluid filled cavity called antrum.
(antrum first appears in tertiary follicle).
Tertiary follicle shows an outer theca externa and an inner theca interna.
Theca interna produces oestrogen.
Meiosis - I will be completed in tertiary follicle and it is an unequal
division which results in the formation of a large haploid secondary
oocyte and a small haploid first polar body.
The secondary oocyte retains the bulk of the cytoplasm whereas the
first polar body gets only very negligible amount of cytoplasm.
The tertiary follicle grows in size to form a mature follicle called
Graafian follicle.
Zona pellucida:-The secondary oocyte secretes a new non cellular
protective membrane called zona pellucida. (It disappears only during
blastulation)
Ovulation:- The release of an ovum, in the form of secondary oocyte
from the Graafian follicle, by the influence of LH
(LH surge) is called ovulation.
After ovulation the ovum, which is in the secondary oocyte stage will
be received by the fimbriae and taken to the ampullary region of
fallopian tube for fertilisation
Meiosis II will be started in the secondary oocyte soon after its
formation and it will be suspended at the metaphase II stage.
The remaining part of meiosis II will be conducted only after the
entry of a sperm into the secondary oocyte before it loses its
viability (after ovulation the ovum which is in the secondary oocyte
stage remains viable for about 24 hours).
When a sperm enters into a secondary oocyte, meiosis II will be
completed and as a result a haploid large ootid/female pro nucleus/
mature ovum and a small haploid second polar body will be formed.
The ootid soon after the formation fuses with sperm and a zygote will
be formed, and embryonic development will be started.
The second polar body perishes.
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[From one primary oocyte only one mature ovum (ootid) will be
formed, whereas from one primary spermatocyte four sperms
will be formed].
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Menstrual cycle consists of following phases:-
Menstrual phase/bleeding phase:- [Lasts for about 3 to 5 days]
If the released ovum is not fertilised, it results in the breakdown of the
endometrial lining of the uterus and its blood vessels causing bleeding
(menses/ menstruation / menstrual flow).
The menstrual fluid comes out through the vagina.
Menstrual fluid does not clot due to the presence of plasmin - an
anticoagulant.
The reason for the rupture of endometrial lining is due to rapid
decline in progesterone level
The reason for the decline in the level of progesterone is degeneration
of corpus luteum
In the absence of fertilization the corpus luteum degenerates due to
the decline in the level of LH
During the menstrual phase estrogen & progesterone level is
very low (ovarian hormones)
A human female can postpone her menstruation by increasing the
level of progesterone and estrogen
[Lack of menstruation may be indicative of pregnancy. However, it
may be due to some other causes like stress, poor health etc.]
Follicular phase/Proliferative phase/pre ovulatory phase-
[lasts for about 8 to 10 days]
Ovarian follicles grow by the stimulation of FSH
The growing ovarian follicle secretes estrogen and stimulate the
proliferation of endometrium
Ovulatory phase
In a 28 days of long menstrual cycle, ovulation may occurs on the
14th day
However ovulation may occurs two days earlier or two days later
Both LH and FSH attain the peak level in the middle of cycle
(about 14th day).
LH surge causes ovulation.
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Egg membranes: • Plasma membrane • Zona pellucida
• Corona radiata
Periviteline space is the space seen between plasma membrane
and zona pellucida.
Fertilization:-
During copulation (coitus) semen is transferred into the vagina from
penis.
The motile sperms swim rapidly towards the ampullary region of
fallopian tube.
The correct sequence of the sperm movement in the female genital
tract is
Vagina cervix uterus isthmus of fallopian tube ampullary
region of fallopian tube (site of fertilization)
During fertilisation, a sperm comes in contact with the zona pellucida
layer of the ovum and induces changes in the membrane that block
the entry of additional sperms. Thus polyspermy will be prevented.
The secretions of the acrosome help the sperm to enter into the
cytoplasm of the ovum through the zona pellucida and the plasma
membrane
The entry of a sperm into the secondary oocyte induces the completion
of meiosis II and it results in the formation of a large haploid mature
ovum called ootid/female pro nucleus and a small haploid second
polar body.
Determination of sex of the baby:-
The chromosome pattern in the human female is XX and that in the
male is XY
Therefore female is homogametic and male is heterogametic.
So sex of the baby is determined by the male and not by the female
Cleavage:-
The division of zygote is called cleavge and the resulting cells are
called blastomeres
The cleavage starts while the zygote is inside the fallopian tube
Morula:-The embryo with 8 to 16 blastomeres is a solid sphere called
morula
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The placenta facilitates the supply of oxygen and nutrients to the
embryo and also the removal of carbon dioxide and excretory/waste
materials produced by the embryo .
Placenta also acts as an endocrine tissue because it produces
many hormones to maintain pregnancy.
• Human chorionic gonadotropin (hCG) 2. Human Placental
Lactogen (hPL) – target organ is mammary glands 3.Estrogen
4.Progesterone
Besides in the later phase of pregnancy, ovary(corpus luteum)
secretes a hormone called relaxin. Placenta also produces relaxin
During pregnancy corpus luteum decreases its size and activities
after the formation of placenta. However, corpus luteum will be
retained till parturition.
Hormones produced only during pregnancy are - hCG, hPL & relaxin
The levels of estrogens, progestogens, cortisol, prolactin, thyroxin,
etc., are increased in the maternal blood for supporting the foetal
growth, metabolic changes in the mother and maintenance of
pregnancy.
The major features of embryonic development at various months
of pregnancy.
After one month of pregnancy, the heart is formed.
By the end of the second month of pregnancy, the foetus develops
limbs and digits.
By the end of 12 weeks (first trimester – first three months), most of
the major organ systems are formed, the limbs and external genital
organs are well-developed.
The first movements of the foetus and appearance of hair on
the head are usually observed during the fifth month.
By the end of about 24 weeks (end of second trimester), the body is
covered with fine hair, eye-lids separate, and eyelashes are formed.
The average duration of human pregnancy is about 9 months
(gestation period)
By the end of nine months of pregnancy, the foetus is fully developed
and is ready for delivery.
Parturition/Child birth/Delivery:-
The process of childbirth is called parturition which is induced by a
complex neuroendocrine mechanism involving cortisol, estrogens
and oxytocin.
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The signals for parturition originate from the fully developed foetus
and the placenta which induce mild uterine contractions called foetal
ejection reflex.
This triggers release of oxytocin (birth hormone) from the maternal
posterior pituitary.
Oxytocin acts on the uterine smooth muscles and causes stronger
contractions, which in turn stimulates further secretion of oxytocin.
Simultaneously relaxin hormone relaxes the ligaments in the pelvis,
softens and widens the cervix, and helps the expulsion of foetus
through birth canal.
In order to enhance child birth, synthetic form of oxytocin (Pitocin)
can be administered.
Parturition is followed by the expulsion of placenta and the remains
of umbilical cord is called after birth
Lactation:-
The mammary glands of the female undergo differentiation during
pregnancy under the influence of hormones.
Mammary glands starts producing milk towards the end of pregnancy
by the process called lactation with the help of prolactin.
The ejection of milk is induced by oxytocin, helps the mother in feeding
the new-born.
Colostrum:-
The milk produced during the initial few days of lactation is called
colostrum (slightly yellow in colour) which contains antibody such as
IgA & rich in nutrients. It provides natural passive immunity to the
infant.
Lactational amenorrhoea:-Menstrual cycle does not occur during the
period of intense lactation following parturition. Prolactin suppresses
gonadotropin secretion.
Identical twins /monozygotic twins:- develop from a single zygote by
the separation of two blastomeres after the first cleavage.
The offsprings are either two males or two females.
Non-identical twins/dizygotic twins/fraternal twins:-The twins, born from
two different zygotes are called non-identical twins.
The offsprings are either one male and one female, or two males/
two females
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CHAPTER - 02
REPRODUCTIVE HEALTH
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The skin cells (somatic cells) of the foetus present in amniotic fluid
is tested in amniocentesis
Through amniocentesis the sex of the foetus is also can be deter-
mined.
The presence of Barr body in somatic cells is an indication of female
foetus.
(Barr body is an inactive X chromosome present in the somatic cell
of human female)
In India, there is a statutory ban on amniocentesis for sex-determina-
tion to legally check increasing female foeticides.
Amniocentesis is safe, between 14 – 16 weeks of pregnancy.
Population stabilization:-
Increased health facilities, better living conditions are the cause
of the growth of population.
The world population was around 2 billion (2000 million) in 1900,
6 billion by 2000 and 7.2 billion in 2011
Population in India
• 350 million at the time of our independence (1947)
• One billion in 2000 and 1.2 billion in May 2011.
The probable reasons for population explosion in India are
Decline in death rate(mortality)
Decline in maternal mortality rate (MMR)
Decline in infant mortality rate (IMR)
Increase in number of people in reproducible age.
According to the 2011 census report, the population growth rate was
less than 2 per cent, [20/1000/year].
Birth control:-
Motivate smaller families by using various contraceptive methods,
and give incentives to couples with small families
In India the legal minimum age at the time of marriage is 18 for fe-
males and 21 for males.
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Characteristics of Ideal contraceptives:- They must be
• User-friendly • Easily available • Effective
• Reversible • No or least side-effects.
• Noway interfere with the sexual drive, desire and/or the sexual act
of the user.
Contraceptive methods
A. Natural/Traditional methods (mechanism of action -avoiding
chances of ovum and sperms meeting).
Periodic abstinence:-
Couples avoid or abstain from coitus from day 10 to 17(fertile pe-
riod) of the menstrual cycle when ovulation could be expected [chance
of fertilization is very high in fertile period]
Withdrawal method/coitus interruptus:-
Male partner withdraws his penis from the vagina just before ejacula-
tion so as to avoid insemination.
Lactational amenorrhea – (amenorrhea means absence of men-
struation)
No menstrual cycle occurs during the period of intense lactation, fol-
lowing parturition. ( Excess presence of prolactin inhibits gonadotro-
pin release)
So as long as the mother breast-feeds the child fully, chances of
conception are almost nil.
Lactational amenorrhea is effective only up to a maximum period of
six months following parturition.
B. Barrier methods:-prevent physical meeting of the sperm and ovum
with the help of barriers.
These methods are available for both males and females.
Condoms:- Are made of thin rubber/latex sheath that are used to
cover the penis in the male or vagina and cervix in the female, just
before coitus so that the ejaculated semen would not enter into the
female reproductive tract.
Female condom is called Femidom
Condoms give privacy to the user because both male and female
condoms are disposable & can be self-inserted.
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It protects the user from AIDS & other STIs to a certain extent.
Other barriers only for females are
Diaphragms, Cervical caps, Vaults
Made of rubber that are inserted into the female reproductive tract to
cover the cervix during coitus.
Prevents conception by blocking the entry of sperms through the
cervix.
They are reusable.
Spermicidal creams, jellies and foams are usually used along with
these barriers to increase their contraceptive efficiency.
C. Intra-Uterine Devices (IUD) /Intra-Uterine Contraceptive Device
[IUCD]:-
Most widely accepted contraceptive methods in India.
These devices cannot be self inserted. So the service of doctors/
expert nurses is required. (It is not user-friendly)
IUDs are ideal contraceptives for the females who want to delay preg-
nancy and/or space children.
Major IUDs are
1. Non-medicated IUDs. Eg:- Lippes loop
2. Copper-releasing IUDs. Eg:- Cu T. Cu 7, Multiload 375
3. Hormone-releasing IUDs. Eg:-Progestasert, LNG 20
Principle of working:-
IUDs increase phagocytosis of sperms within the uterus
Cu ions released suppress sperm motility and the fertilising capacity
of sperms
The hormone releasing IUDs, in addition make the uterus unsuitable
for implantation and the cervix hostile to the sperms
D. Oral contraceptives (pills)
Oral contraceptives are hormonal preparations in the form of pills
Pills contain progestogens or progestogen–estrogen
combinations[steroid pills]
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Pills have to be taken daily for a period of 21 days starting within the
first five days of menstruation.
Pills inhibit ovulation and implantation, by inhibiting the release of
FSH & LH
It alters the quality of cervical mucus to prevent / retard the entry of
sperms
Saheli – is a non-steroidal oral contraceptive pills for females.
It is a ‘once a week’ pill with very few side effects and high contra-
ceptive value.
Saheli blocks the estrogen receptors present on endometrium and
prevents the proliferation of endometrium, and thus implantation will
be prevented
Saheli developed in CDRI-Central Drug Research Institute Lucknow
E. Injections or Implants:-
Progestogens alone or in combination with estrogen used as injec-
tions or implants under the skin of females.
Mode of action is similar to that of pills but its effective period is much
longer.
F. Emergency contraceptives
Administration of progestogens or progestogen-estrogen combina-
tions or IUDs within 72 hours of coitus, rape or casual unprotected
intercourse, have been found to be effective as emergency contra-
ceptive. (It prevents implantation)
G. Surgical method/Terminal method/Sterilization method
This method is used to prevent any more pregnancies.
Its main demerit is reversibility is very poor.
Mode of action:-
Blocks gamete transport and prevents conception
Vasectomy:-
Sterilisation procedure in male is called vasectomy.
In vasectomy, a small part of the vas deferens is removed or tied up
through a small incision on the scrotum (vasa deferentia-pl.)
After vasectomy semen shows no sperm.(even after vasectomy
sperm production continues and stored in epididymis)
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Tubectomy:-
Sterilisation procedure in female is called tubectomy
In tubectomy a small part of the fallopian tube is removed or tied up
through a small incision in the abdomen or through vagina.
The widespread use of contraceptive methods have a significant role
in checking uncontrolled growth of population
The wide spread use of contraceptives may create ill-effects like nau-
sea, abdominal pain, breakthrough bleeding, irregular menstrual bleed-
ing or even breast cancer, though not very significant, should not be
totally ignored.
Medical Termination of Pregnancy [MTP]:-
Intentional or voluntary termination of pregnancy before full term is
called MTP / induced abortion.
Government of India legalised MTP in 1971 with some strict condi-
tions to avoid its misuse to prevent indiscriminate and illegal female
foeticides.
MTPs are relatively safe during the first trimester (period of first 3
months / 12 weeks of pregnancy).[The MTP - Amendment Act 2017
was enacted by the government of India to prevent illegal abor-
tion consequent maternal mortality and morbidity.]
According to this Act, a pregnancy may be terminated on certain con-
sidered grounds within the first 12 weeks of pregnancy on the opin-
ion of one registered medical practitioner.
If the pregnancy has lasted more than 12 weeks (fewer than 24
weeks), MTP shall be done by the advice of two registered medical
practitioners.
The legal grounds for the termination of pregnancies are:
1) The continuation of the pregnancy would involve a risk to the life of
the pregnant woman or of grave injury physical or mental health.
2) There is a substantial risk that of the child were born, it would suffer
from such physical or mental abnormalities as to be seriously handi-
capped
Sexually Transmitted Infections [STIs] / Venereal Diseases [VD]
/ Reproductive Tract Infections [RTI]:-
Infections or diseases which are transmitted through sexual inter-
course.
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CHAPTER - 03
ANIMAL HUSBANDRY
Dairying is the management of animals for milk and its products for
human consumption.
Strategies
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Poultry is the class of domesticated fowl (birds) used for food or for
their eggs.
The word poultry is often used to refer to the meat.
Animal breeding
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Strategies:-
Superior males and superior females of the same breed are identified
and mated in pairs
The progeny obtained from such matings are evaluated and superior
males and females among them are identified for further mating.
Superior female cow/buffalo - means that produces more milk per
lactation.
Superior male is the bull that gives rise to superior progeny
Inbreeding increases homozygosity
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The fertilized eggs at 8 – 32 cells stages are recovered non surgically
and are transferred to surrogate mothers. A surrogate mother is a
future mother with embryo implanted from another.
The genetic mother is available for another round of super ovulation.
MOET can be used in cattles sheeps, rabbits, buffaloes, mares etc.
Bee – keeping/Apiculture: - is the maintenance of hives of honeybees
for the production of honey.
Honey is a food of high nutritive value and also used as medicine.
Honey bee also produces bee wax (the real product of honey bee),
which is used in many industries, such as in the preparation of
cosmetics and polishes of various kinds.
Bee-keeping can be practiced in any area where there are sufficient
bee pastures of some wild shrubs, fruit orchards and cultivated crops.
Apis indica is the most common Indian species
Important steps in successful bee keeping.
1.Knowledge of the nature and habits of bees, 2.Selection of suitable
location for keeping the beehives 3. Catching and hiving of swarms
(group of bees) 4. Management of beehives during different seasons.
5. Handling and collection of honey and of beeswax. 6. Keeping
beehives in crop fields during flowering period increases pollination
efficiency and improves the yield.
Bees are the pollinators of sunflower, Brassica, apple and pear.
Fisheries:- It deals with the catching, processing or selling of fish, shellfish
or other aquatic animals.
Common fresh water fishes:- Catla, Rohu, Common carp etc.
Common marine fishes:- Hilsa, Sardines, Mackerel and Pomfrets
Pisciculture:-It is a process of growing fish/selling/using its products for
domestic/commercial use.
Fish can be grown in sea water or fresh water or estuary . An estruary
is where river meets the sea. Here salt water mixes with fresh water.
Blue revolution is for increasing fish production.
Aquaculture:-It is the process of growing/selling of aquatic plants/animals
for commercial purposes.
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CHAPTER - 04
PRINCIPLES OF INHERITANCE AND VARIATION
Genetics
• Genetics deals with the inheritance, as well as the variation of
characters from parents to offspring.
• Inheritance is the process by which characters are passed on from
parent to progeny; it is the basis of heredity.
• Variation is the degree by which progeny differ from their parents.
• Humans knew from as early as 8000-1000 B.C that one of the causes
of variation was hidden in sexual reproduction.
• It was during the mid-nineteeth century that headway was made in
the understanding of inheritance.
• Gregor Mendel, conducted hybridisation experiments on garden peas
(Pisum sativum) for seven years (1856-1863) and proposed the laws
of inheritance in living organisms.
• During Mendel’s investigations into inheritance patterns it was for the
first time that statistical analysis and mathematical logic were applied
to problems in biology.
• His experiments had a large sampling size, which gave greater
credibility to the data that he collected.
• The conformation of his inferences from experiments on successive
generations of his test plants, proved that his results pointed to general
rules of inheritance rather than being unsubstantiated ideas.
• Mendel investigated characters in the garden pea plant that were
manifested as two opposing traits eg., tall or dwarf plants, yellow or
green seeds. This allowed him to set up a basic framework of rules
governing inheritance, which was expanded on by later scientists to
account for all the diverse natural observations and the complexity
inherent in them.
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• Mendel conducted such artificial pollination/cross pollination
experiments using several true-breeding pea lines.
• He crossed tall and dwarf pea plants to study the inheritance of one
gene [Refer. page 71 : Fig 5.2 NCERT]
• Mendel observed that all the F1 progeny plants were tall, like one of its
parents; none were dwarf. [Refer. page 72 : Fig 5.3 NCERT]
• Mendel then self-pollinated the tall F1 plants and to his surprise found
that in the Filial 2 or Second filial generation some of the offspring
were dwarf. The character that was not seen in the F1 generation was
now expressed. [Refer. page 73 : Fig 5.4 NCERT]
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• Genes, are the units of inheritance. They contain the information that
is required to express a particular trait in an organism.
• Genes which code for a pair of contrasting traits are known as alleles.
• Alleles are slightly different (or alternate) forms of the same gene.
• If we use alphabetical symbols for each gene, then the capital letter is
used for the trait expressed at the F1 (dominant) stage and the small
alphabet for the other trait (recessive).
• Allelic pair of genes for height are identical or homozygous, TT and tt,
respectively. TT and tt are called the genotype of the plant while the
descriptive terms tall and dwarf are the phenotype.
• When the tall and dwarf plant produce gametes, by the process of
meiosis, the alleles of the parental pair separate or segregate from
each other and only one allele is transmitted to a gamete and F1 hybrids
have Tt (heterozygous).
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• The F1 and F2 plants can be understood from a diagram called
Punnett Square.
• Due to the dominance of one character over the other that all the F1
are tall (though the genotype is Tt) and in the F2 3/4th of the plants are
tall (though genotypically 1/2 are Tt and only 1/4th are TT). This leads
to a phenotypic ratio of 3/4th tall : (1/4 TT + 1/2 Tt) and 1/4th tt, i.e., a
3:1 ratio, but a genotypic ratio of 1:2:1.
(1/2T + 1/2 t) 2 = (1/2T + 1/2t) X (1/2T + 1/2t) = 1/4 TT + 1/2Tt + 1/4 tt.
ANS : In F2 generation there are two types of genotypes that show tall
trait which are Tt and TT. If he would have crossed plants with TT and
TT genotypes, he would got all tall plants but he would have crossed
plants with Tt and Tt genotype, he would got 3 tall plants and 1 dwarf
plant.
• Using Punnett square, try to find out the nature of offspring of a test
cross. What ratio did you get? Using the genotypes of this cross, can
you give a general definition for a test cross?
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yr
Types of
Gametes YR Yr yR yr
YR Yr yR yr
Test cross YyRr Yyrr yyRr yyrr
Progeny yr Yellow Yellow Green Green
Round Wrinkled Round Wrinkled
Tall Dwarf
Tt tt
t t
T Tt Tt
Tall Tall
t tt tt
Dwarf Dwarf
Tall(Tt)- 50% dominant
Dwarf (tt) - 50% recessive
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In a dissimilar pair of factors one member of the pair dominates
(dominant) the other (recessive).
The law of dominance is used to explain the expression of only one of
the parental characters in a monohybrid cross in the F1 and the
expression of both in the F2 .
It also explains the proportion of 3:1 obtained at the F2 .
Law of Segregation
Alleles separate during gamete formation and once again they reunite
after random fusion of gametes.
Deviations from Mendelism
Incomplete Dominance: When experiments on peas were repeated
using other traits in other plants, it was found that sometimes the F1
had a phenotype that did not resemble either of the two parents and
was in between the two.
• The inheritance of flower colour in the dog flower (snapdragon or
Antirrhinum sp.) is a good example to understand incomplete
dominance [Refer. page 76 : Fig 5.6 NCERT].
• What happened was that R was not completely dominant over r and
this made it possible to distinguish Rr as pink from RR (red) and rr
(white) .
Explanation of the concept of dominance:
• Assume of a gene that contains the information for producing an
enzyme (i.e., protein). Now there are two copies of this gene, the two
allelic forms. Let us further assume that the normal allele produces
the normal enzyme that is needed for the transformation of a substrate
(S).
• Theoretically, the modified allele (generally recessive allele) could be
responsible for production of -
(i) The normal/less efficient enzyme, or
(ii) A non-functional enzyme, or
(iii) No enzyme at all
• In the first case, the modified allele is equivalent to the unmodified
allele (dominant allele), i.e., it will produce the same phenotype/trait,
i.e., result in the transformation of substrate S. Such equivalent allele
pairs are very common.
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Note: Dominance is not an autonomous feature of a gene or the
product that it has information for.
B. Phenylketonuria in humans
Polygenic inheritance
• When traits are generally controlled by three or more genes and are
thus called as polygenic traits. For example, skin colour in humans
etc.,
• The genotype with all the dominant alleles (AABBCC) will have the
darkest skin colour and that with all the recessive alleles (aabbcc) will
have the lightest skin colour.
• As expected the genotype with three dominant alleles and three
recessive alleles will have an intermediate skin colour.
Dihybrid cross (Inheritance of two genes)
• Mendel's third law of independent assortment (inheritance of
two genes) states that,
Inheritance of one character is always independent of inheritance of
another character.
• Can you, using the Punnett square data work out the genotypic ratio
at the F2 stage and fill in the format given? Is the genotypic ratio also
9:3:3:1? [Refer. page 79 : Fig 5.7 NCERT]
Phenotypic ratio : 9 : 3 : 3 : 1
Genotypic ratio : 1 : 2 : 1 : 2 : 4 : 2 : 1 : 2 : 1
1 RRYY,RRyy,rrYY,rryy
2 RRYy,rrYy,RyYY,Rryy
4 RrYy
Chromosomal Theory of Inheritance
Mendel published his work on inheritance of characters in 1865. For
several reasons it remained unrecognised till 1900.
In 1900, three scientists (de Vries, Correns and Von Tshermak)
independently rediscovered Mendels results on the inheritance of
characters.
By 1902, the chromosome movement during meiosis had been
worked out.
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A B
Occur in pairs Occur in pairs
Segregate at the time of Segregate at gamete
gamete formation such formation and only one of
that only one of each pair each pair is transmitted to
is transmitted to a a gamete
gamete
Independent pairs One pair segregates
segregate independently independently of another
of each other pair
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Linkage and Recombination
Morgan carried out several dihybrid crosses in Drosophila to study
genes that were sex-linked. These crosses were similar to the dihybrid
crosses carried out by Mendel in Peas.
Morgan and his group identified that when the two genes in a dihybrid
cross were situated on the same chromosome, the proportion of
parental gene combinations were much higher than the non-parental
type [Refer. page 84: Fig 5.11 NCERT].
Morgan coined the term linkage to describe the physical association
of genes on a chromosomes.
He used the term recombination to describe the generation of non-
parental gene combinations.
Morgan and his group found that some genes on the same
chromosome were very tightly linked (showed very low recombination)
while others were loosely linked (showed higher recombination)
Morgan’s student Alfred Sturtevant used the frequency of recombination
between genes and mapped their position on the chromosome.
Sex Determination
On 1891, Henking traced a specific nuclear structure all through
spermatogenesis in a few insects. He also observed that 50 percent
of the sperm received this structure after spermatogenesis, whereas
the other 50 percent sperm did not receive it.
Henking called the structure as X-body. Later X-body was identified
as a chromosome and named it as X-chromosome.
Due to the involvement of the X-chromosome in the determination of
sex, it was designated to be the sex chromosome, and the rest of the
chromosomes were named as autosomes.
Grasshopper is an example of XX-XO type of sex determination.
In a number of other insects and mammals including man, XX-XY
type of sex determination is seen where both male and female have
same number of chromosomes.
In both XO type and XY type, male show heterogamety.
ZZ-ZW method of sex-determination is seen in birds. Here females
show heterogamety.
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In numerical aberrations, number of chromosomes get altered. In
Euploidy, there is an increase in a whole set of chromosomes in an
organism. This is known as polyploidy. This is due to failure of
cytokinesis after telophase stage of cell division.
The chemical and physical factors that induce mutations are called
Mutagens
Mutations
Translocation
Pedigree analysis
GENETIC DISORDERS
Two types,
• Mendelian disorders
• Chromosomal disorders
Mendelian Disorders
Examples :
a) Haemophilia
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b) Colourblindness
It is a sex-linked recessive disorder due to defect in either red or green
cone of eye resulting in failure to discriminate between red and green
colour.
It is due to mutation in certain genes present in the X-chromosome.
It occurs in about 8% of males and only about 0.4% of females.
The son of a woman who carries the gene has a 50% chance of
being colourblind.
A daughter will not normally be colourblind, unless her mother is a
carrier and her father is colour blind.
c) Sickle cell anaemia
an autosome linked recessive trait in which mutant haemoglobin
molecules undergo polymerisation under low oxygen tension causing
change in shape of the RBC from biconvex disc to elongated sickle
like structure. The defect is caused by the substitution of Glutamic
acid (Glu) by Valine (Val) at the sixth position of the beta globin chain
of the haemoglobin molecule. The substitution of amino acid in the
globin protein results due to the single base substitution at the sixth
codon of the beta globin gene from GAG to GUG.
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d) Phenylketonuria
Inborn error of metabolism inherited as autosomal recessive trait. The
affected individual lacks an enzyme that converts the amino acids
phenylalanine to tyrosine. As a result of this phenylalanine is
accumulated and converted into phenylpyruvic acid and other
derivatives that results into mental retardation.
e) Thalassemia
This is an autosome -linked recessive blood disease.
The defect could be due to either mutation or deletion which ultimately
results in reduced rate of synthesis of one of the globin chains
( and chains) that make up haemoglobin.
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Chromosomal Disorders
Failure of segregation of chromatids during cell division results in loss
or gain of chromosome called aneuploidy. The failure of cytokinesis
leads to two sets of chromosome called polyploidy.
Down’s Syndrome (Trisomy of 21st pair) - is due to presence of
additional copy of the chromosome number 21. The affected individual
is short statured with small rounded head, furrowed tongue and
partially opened mouth. Mental development is retarded.
Klinefelter’s Syndrome (Trisomy of X-chromosome) - due to
presence of an additional copy of X-chromosome (XXY). Such persons
have overall masculine development however, the feminine
development (development of breast, i.e., Gynaecomastia) is also
expressed. They are sterile.
Turner’s Syndrome (Monosomy of X-chromosome) - caused due
to the absence of one of the X-chromosome. 45 with XO, such females
are sterile as ovaries are rudimentary. They lack secondary sexual
characters.
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CHAPTER - 05
MOLECULAR BASIS OF INHERITANCE
• 1869, F. Meischer extracted the pus and treated them with alkali
studied the chemical composition of the extract.
Observation: The extract was acidic and rich in N, P etc.,
Conclusion: He named the extract as Nuclein. Thus, credit for the
discovery of DNA is given to F. Meischer.
Experiments to prove DNA is the genetic material
• 1928, F. Griffith bacterial transformation experiment. Virulent S form
injected to mice, mice died. Avirulent R form injected to mice, mice
survived, heat killed S form injected to mice, mice survived and when
a mixture of heat killed S form and R form was injected to mice, mice
died.Griffiths Conclusion: Some transforming principle of heat killed
Smooth form transformed Rough or R strain to S form.
• 1933-44 - Oswald Avery, Colin MacLeod and Maclyn McCarty (popularly
Avery, Macleod and McCarty), using Protease, DNase and RNase
respectively. They found no transformation of R form to S form in the
test tube with DNase.
• 1952, Alfred Hershey and Martha Chase conducted T2 bacteriophage
experiment or Blenders experiment. In experiment 3 (A) with radioactive
S35 labelled in protein capsule or capsid was found at the supernatant
and in experiment 3 (B) P32 labelled in DNA of T2 bacteriophage was
found at the base of the test tube inside E.coli cells. This draws two
conclusions.
1. Protein is not the genetic material of T2 bacteriophage and
2. DNA is the genetic material of T2 bacteriophage.
Structure of DNA
• 1953, James.D. Watson and Francis.H.Crick proposed the double
helical model structure of DNA (i.e., B-DNA), based on X-ray diffraction
studies of DNA by Rosalind Franklin and Maurice Wilkins.1962,
Wilkins, Watson and Crick were awarded Nobel Prize.
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• DNA is a long polymer of deoxyribonucleotides. The length of DNA is
usually defined as number of nucleotides present in it. The DNA is
double stranded, antiparallel, alpha helical, right handed,
complimentary polynucleotide chains. The two chains have anti-parallel
polarity. It means, if one chain has the polarity 5 3 , the other has
3 5 (i.e., direction)
• The sugar and phosphate forms the backbone of DNA linked by
phosphodiester bonds and the nitrogen bases are towards inside.
The phosphate gives negative charge to DNA.
• The bases in two strands are paired through hydrogen bond (H-bonds)
forming base pairs (bp). Adenine forms two hydrogen bonds with
Thymine from opposite strand and vice-versa. Similarly, Guanine is
bonded with Cytosine with three H-bonds. As a result, always a purine
comes opposite to a pyrimidine. This generates approximately uniform
distance between the two strands of the helix.
• In each helical turn about 10 base pairs (bp) are present. The space
0
of distance between two base pairs is 0.34 nm (or 3.4 A ). Thus, the
0
length of each helical turn or pitch of the helix is 3.4 nm (or 34 A ). The
plane of one base pair stacks over the other in double helix. This, in
addition to H-bonds, confers stability of the helical structure.
• The Chargaff's rule is applied only to double stranded DNA (or dsDNA)
and not applied to single stranded DNA (or ssDNA) or RNA. Chargaff's
rule 1: states that in dsDNA, amount of purine is always equal to
amount of pyrimidine or the ratio of molar concentration of purine and
pyrimidine is always equal to 1. i.e., Purine =Pyrimidine or A+G=T+C
or A + T / G + C = 1. Chargaff's rule 2: states that in dsDNA, the ratio
of molar concentration i.e., A+T/G+C = constant for species.
Packaging of DNA
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Process of DNA replication
• In eukaryotic cells the DNA replication occurs at the synthesis of S
phase of interphase of the cell cycle and in prokaryotic cells the DNA
replication occur prior to fission. In E.coli DNA replication occurs with
the speed of 2000 base pairs per second, to complete DNA replication
in 18 minutes, when the cell divides every 20 minutes.
• Deoxyribonucleoside triphosphates or dNTP's (i.e., dATP, dGTP, dCTP
and dTTP} - serve dual purpose i.e., Act as substrate and Provide
energy and enzymes and proteins.
• Two polynucleotide strands of DNA will unwind and uncoil in presence
of DNA helicase or unwindase or unzipping enzyme, which breaks
the hydrogen bonds.
• Due to unwinding of DNA strands, tension or strain is created at the
distal ends of the DNA molecule, which is relieved by DNA Gyrase/
Topoisomerase. To prevent rewinding and recoiling, single strand
binding proteins or SSB's attach to template strands. For the initiation
of DNA synthesis, a short segment of RNA called RNA primer
synthesized by RNA primase is required. Using RNA primer, DNA
polymerase III progressively adds deoxyribonucleotides in 5 3
direction. Afterwards, DNA polymerase I degrade RNA primer and
replace it with DNA. Later, DNA ligase joins the fragments i.e., Okazaki
fragments of DNA. In the template strand of 3 5 direction occurs
a continuous synthesis of DNA called leading or continuous strand
and in the template strand of 5 3 direction occurs a discontinuous
synthesis of DNA called lagging strand and each discontinuous
fragment of the DNA is called Okazaki fragment.
RNA World
Messenger or mRNA
• Messenger or mRNA (3-5%)- Cistron: functional part of the gene
which can code for a polypeptide chain. Cistron is equivalent to
structural gene.
• Codon (genetic code) is a series of three ribonucleotide or nitrogen
base sequences on mRNA, that can code for an amino acid (on tRNA).
• Structure of mRNA - Cap region with methylguanosine triphosphate
and poly A tail is absent in prokaryotic mRNA. 5' cap with 7-
methylguanosine triphosphate or methylguanylate - present at the
5'cap of mRNA (in eukaryotes). Untranslated region efficient translation.
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Coding region - starts with initial codon AUG (which codes for N-
formylmethionine or N-fmet in prokaryotes and Methionine in
eukaryotes) followed by codon sequences that ends at stop codons
UAA or UAG or UGA 3'end. Poly A tail - About 200-300 adenine
nucleotides are present at 3'tail end to provide structural stability to
mRNA (in eukaryotes).
• Polycistronic mRNA - mostly in prokaryotes, multiple genes transcribe
to for single molecule of mRNA with multiple coding regions
In prokaryotes transcription and translation occur simultaneously in
cytoplasm.
• Eukaryotic mRNA - Monocistronic mRNA- mostly in eukaryotes, one
gene transcribes to form single molecule of mRNA (with one coding
region). In eukaryotes, transcription occur inside nucleus and
translation in cytoplasm. Note: In eukaryotes, immediately after
transcription inside nucleus, heterogeneous nuclear RNA or hnRNA
is formed. The hnRNA is converted to mRNA by RNA processing,
inside nucleus. There are three steps in RNA processing:
Capping- addition of 7-methyl guanosine triphosphate 5' end of hnRNA
Tailing - addition of about 200 to 300 adenine nucleotides at 3' tail
end of hnRNA
Splicing - carried out by spliceosomes (ribozyme proteins complex)
helps to remove intron and join exons to form mRNA. Note: This mRNA
is taken from nucleus to cytoplasm for translation.
Ribosomal or rRNA
• Ribosomal or rRNA (70-80%) - rRNA is found in ribosomes i.e., 70S
or 80S
• Prokaryotic ribosome has 23 S ribozyme Peptidyl transferase at larger
subunit of ribosome (i.e., at 50S) and Eukaryotic ribosome has 28 S
ribozyme Peptidyl transferase at larger subunit of ribosome (i.e., at
60S)
Transfer or tRNA
• Transfer or tRNA (15-20%) - There are 61 types of tRNA and stop
codons do not have tRNA (and neither the stop codons code for any
amino acids nor have anticodons) . The tRNA is amino acid specific
but the amino acid is not specific to tRNA except methionine and
tryptophan. Clover leaf shape structure of tRNA (secondary structure
and biologically inactive).
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• The tRNA, then called sRNA (soluble RNA), was known before the
genetic code was postulated.
Replication
Transcription Translation
DNA mRNA Protein
Central dogma
Replication
Transcription Translation
DNA RNA Protein
Reverse
transcription
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Genetic code/Codon
• George Gamow - a physicist, using permutation combination of
43 (4 × 4 × 4) would generate 64 codons; generating many more
codons than required. ie., triplet
• Marshall Nirenberg- synthesized mRNA using poly- U sequence
etc., and used a cell-free system, amino acids, enzymes etc., for
protein synthesis and thus, obtained a polypeptide chain, which finally
helped the code to be deciphered.
• Har Gobind Khorana - He used chemical method in synthesising
RNA molecules with defined base combinations of bases and to obtain
homopolymers and copolymers.
• Severo Ochoa - He discovered the enzyme "Polynucleotide
phosphorylase" (i.e., RNA polymerase) that can be used in
polymerising RNA with defined sequences in a template independent
manner (enzymatic synthesis of RNA).
Features of genetic code:
• The genetic code or codon is a series of three ribonucleotide or nitrogen
base sequence on mRNA, to be read on 5'3' direction and written
using letters.
• There are 64 codons. Out of which 61 codons code for 20 naturally
occurring amino acids and three codons do not code for any amino
acids namely stop codons.
• The initiator codon is AUG (sometimes GUG) and stop codons are
UAA(Ochre), UGA(Amber) and UGA(Opal).
• Degeneracy - Where one amino acid can be specified by more than
one codons Note Methionine and Tryptophan do not show degeneracy
Unambiguous nature- Where particular specific codon always codes
for a particular specific amino acid only.
• The genetic code is non-overlapping, to be read collinear and must
be written without any punctuations.
• The code is nearly universal: for example, from bacteria to human
UUU would code for Phenylalanine.
• Some exceptions to this rule have been found in mitochondrial codons,
and in some protozoans.
Note: AUG has dual functions. It codes for Methionine (met) , and it
also act as initiator codon.
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Protein synthesis
• Protein synthesis - It occurs in two stages i.e., Transcription and
Translation
• Transcription : The process of formation of RNA transcript from the
template strand of DNA, at transcription unit. Transcript unit: it is
defined by three regions on DNA from where RNA transcript is formed.
The three regions of transcription unit are
1. A promoter
2. Structural gene (equivalent to structural gene)
3. A terminator
• A promoter - is located towards 5' end of coding strand, at upstream
region of structural gene. Promoter provides binding recognition site.
• Structural gene (equivalent to cistron) is present between promoter
and terminator. As a convention, the DNA strand in 3 5 direction
act as template strand and it has sequence complimentary to mRNA
transcript. As a convention, the DNA strand in 5 3 direction act as
coding strand and it has sequence similar to mRNA transcript except
for Thymine and Uracil Note: As a convention, the position of promoter
and terminator are define on coding strand. A terminator - is located
towards the 3' end of coding strand, towards downstream region of
the structural gene.
Transcription
• Transcription in Prokaryotes Note: Single form of RNA polymerase
can transcribe to form different type of cellular RNA i.e., mRNA, tRNA,
rRNA etc., in prokaryotic cells. The RNA polymerase is composed of
Core enzyme and Sigma ( ) factor (also known as initiation factor in
prokaryotes).
• STEPS: Sigma factor joins core enzyme to activate RNA polymerase.
RNA polymerase binds to promoter and initiates the synthesis of
formation of mRNA transcript towards 5 3 direction. After the
initiation of the mRNA synthesis, sigma factor leaves core enzyme,
near promoter. mRNA transcript grows longer (i.e., elongation)
Termination.
Transcription in Eukaryotes - Three forms of RNA polymerases
are required to transcribe to form different type of cellular RNA i.e.,
mRNA, tRNA, rRNA etc., in eukaryotic cells.
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• RNA polymerase-I transcribe to form rRNA (5.8S, 18S and 28S), RNA
polymerase-II polymerase-I transcribe to form hnRNA (or precursor
mRNA) and RNA polymerase-III polymerase-I transcribe to form tRNA,
5S-rRNA and small nuclear RNA or snRNA.
• RNA polymerase II transcribe to form heterogeneous nuclear RNA or
hnRNA. The hnRNA is converted to mRNA by RNA processing, inside
nucleus. There are three steps in RNA processing:
1. Capping- addition of 7-methyl guanosine triphosphate at 5' end of
hnRNA.
2. Tailing - addition of about 200 to 300 adenine nucleotides at 3' tail
end of hnRNAand
3. Splicing - carried out by spliceosomes (ribozyme proteins complex)
helps to remove intron and join exons to form mRNA. This mRNA
is taken from nucleus to cytoplasm for translation.
Translation
• Translation-The process of formation of a polypeptide or protein, using
codon sequence of mRNA and with the help of tRNA and rRNA, in
cytoplasm.
• Activation/Charging/aminoacylation of tRNA- Aminoacyl tRNA
synthetase attaches specific amino acid (through -COOH) end to 3'end
of tRNA to make tRNA charged or active or aminocacylated tRNA.
Initiation of polypeptide chain synthesis .Smaller subunit of ribosome
attaches to 5' cap of mRNA. The charged tRNA with initiator amino
acid arrives at P site. Larger subunit of ribosome joins to complete
the formation of the initiation complex. Initiation factors or IF (different
in prokaryotes and eukaryotes), are required.
• Elongation of polypeptide chain synthesis - The charged tRNA
arrives at A site. Peptidyl transferase (23S or 28S) cleaves the bond
between tRNA and amino acid of P site and forms the peptide bond
between -COOH end of P-site amino acid and -NH2 end of A site amino
site (and the peptide bond is formed towards A site). Peptide bond
formation is simultaneous with the translocation of ribosome to next
codon in 5 3 direction with the help of enzyme translocase and
elongation factor or EF (different in prokaryotes and eukaryotes).
• Termination of polypeptide chain synthesis - When ribosome
reaches the stop codons, releasing factors (different in prokaryotes
and eukaryotes), join the complex. Peptidyl transferase (23S or 28S)
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cleaves the bond between tRNA and amino acid of the polypeptide
chain, ribosome subunits dissociate, tRNA and mRNA leave the site.
Thus, at the end of translation, a polypeptide chain or protein is formed.
• In eukaryotes, nascent polypeptide chain formed has to be taken to
golgi complex for further modification to attain biological structure and
function (post translational modification).
Gene regulation and lac operon
• Gene regulation : Gene regulation is performed by the metabolic,
physiological or environmental conditions (that regulate the expression
of genes).
• In eukaryotes, the regulation could be exerted at
1. Transcriptional level (formation of primary transcript)
2. Processing level (regulation of splicing)
3. Transport of mRNA from nucleus to the cytoplasm
4. Translational level.
• The operator region is adjacent to the promoter elements in most
operons and in most cases the sequences of the operator bind a
repressor protein.
• Operon (single unit) - group of genes which work together to bring
about a common effect. Generally, genes of operon include Regulator
gene, Promoter gene, Operator gene and Structural genes
• Inducer operon - is transcriptionally active or switched on in
presence of the substrate molecule e.g., lac operon (lactose or
allolactose act as inducer). In lac operon, lac stands for lactose or
beta-galactoside ( galactose + glucose ( (1 4) glycosidic bond))
Note: Lac operon model in E.coli was proposed by Jacob and Monod
in the year 1961 (Nobel prize - 1965).
• Lac operon - Switched off - when lactose is absent
Components of Lac operon:
1) Regulator gene
(Lac i; where "i" stands for inhibitor and not inducer)- transcribes to
form repressor protein or regulator protein (with definite structure)
Note: In absence of lactose, repressor protein is present attached to
operator gene (switched off condition).
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2) Promoter gene
(Lac P) - is the site for binding of RNA polymerase that transcribes
structural genes.
Note: When repressor protein is present at operator gene, RNA
polymerase present in promoter gene cannot transcribe structural
genes (switched off condition).
3) Operator gene
(Lac O) - is the site for the binding of repressor protein in absence of
lactose.
Note: Only in presence of the lactose, repressor protein can be made
free from operator gene (switch on condition)
4) Structural genes - are of three types in lac operon, Lac Z - transcribes
to form -galactosidase (to digest lactose or lactose}. Lac Y -
transcribes to form Permease, a membrane bound protein to increase
the permeability of the lactose into the cell. Lac A - transcribes to
form Transacetylase.
• Lac operon - Switched on - when lactose is present
Human Genome Project (or HGP)
• A very ambitious project of sequencing human genome was launched
in the year 1990. Human Genome Project (HGP) was called a mega
project and was a 13-year and the project was completed in 2003.
Goals of HGP (Some of the important goals of HGP were as follows)
• Identify all the approximately 20,000-25,000 genes in human DNA;
Determine the sequences of the 3 billion chemical base pairs that
make up human DNA, Store this information in databases; Improve
tools for data analysis, transfer related technologies to other sectors,
such as industries
• Address the ethical, legal, and social issues (ELSI) that may arise
from the project
• Many non-human model organisms, such as bacteria, yeast,
Caenorhabditis elegans (a free living non-pathogenic nematode),
Drosophila (the fruit fly), plants (rice and Arabidopsis), etc., have also
been sequenced.
The methods involved two major approaches.
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• The genes that are expressed as RNA (referred to as Expressed
Sequence Tags (ESTs).
• The other took the blind approach of simply sequencing the whole set
of genome that contained all the coding and non-coding sequence,
and later assigning different regions in the sequence with functions (a
term referred to as Sequence Annotation).
• The cloning resulted into amplification of each piece of DNA fragment
so that it subsequently could be sequenced with ease. The commonly
used hosts were bacteria and yeast, and the vectors were called as
BAC (bacterial artificial chromosomes), and YAC (yeast artificial
chromosomes).
• The fragments were sequenced using automated DNA sequencers
that worked on the principle of a method developed by Frederick Sanger.
• Physical maps on the genome was generated using information on
polymorphism of restriction endonuclease recognition sites, and some
repetitive DNA sequences known as microsatellites (one of the
applications of polymorphism in repetitive DNA sequences shall be
explained in next section of DNA fingerprinting).
Salient Features of Human Genome:
• The human genome contains 3164.7 million nucleotide bases.
• The average gene consists of 3000 bases, but sizes vary greatly,
with the largest known human gene being dystrophin at 2.4 million
bases. The total number of genes is estimated at 30,000-much lower
than previous estimates of 80,000 to 1,40,000 genes. Almost all (99.9
per cent) nucleotide bases are exactly the same in all people. The
functions are unknown for over 50 per cent of the discovered genes.
Less than 2 per cent of the genome codes for proteins. Repeated
sequences make up very large portion of the human genome.
Repetitive sequences are stretches of DNA sequences that are
repeated many times, sometimes hundred to thousand times. They
are thought to have no direct coding functions, but theshed light on
chromosome structure, dynamics and evolution.
• Chromosome 1 has most genes (2968), and the Y has the fewest
(231). Scientists have identified about 1.4 million locations where
single base DNA differences (SNPs - single nucleotide polymorphism,
pronounced as 'snips') occur in humans.
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DNA FINGERPRINTING
• The technique of DNA Fingerprinting was initially developed by Alec
Jeffreys. DNA fingerprinting is a very quick way to compare the DNA
sequences of any two individuals.
• It is these differences in sequence of DNA which make every individual
unique in their phenotypic appearance.
• Polymorphism in DNA sequence is the basis of genetic mapping of
human genome as well as of DNA fingerprinting.
• Polymorphism (variation at genetic level) arises due to mutations.
• Allelic sequence variation has traditionally been described as a DNA
polymorphism if more than one variant (allele) at a locus occurs in
human population with a frequency greater than 0.01.
• Alec Jaffrey used a satellite DNA as probe that shows very high degree
of polymorphism. It was called as Variable Number of Tandem Repeats
(VNTR). The VNTR belongs to a class of satellite DNA referred to as
mini-satellite. A small DNA sequence is arranged tandemly in many
copy numbers. The copy number varies from chromosome to
chromosome in an individual. The numbers of repeat show very high
degree of polymorphism. As a result the size of VNTR varies in size
from 0.1 to 20 kb.
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CHAPTER - 06
EVOLUTION
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Diversity was always the same since creation and will remain same
in future.
3. Theory of biogenesis.
4. Theory of Panspermia.
Early Greek thinkers thought that unit of life is called spore transferred
from other planets.
Proposed that the first form of life would have come from pre existing
non living organic molecules like RNA and protein. The formation of
life was preceeded by chemical evolution.
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Main steps in the origin of life according to the Oparin-Haldane
theory
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1) Palentological evidence
Palentological study reveals the existence of life in past and illustrate
the course of evolution.
Fossils are the remains of extinct organisms buried and preserved
by natural resources.
Fossils are the direct evidences of organic evolution
Fossil in different sedimentary layers showed that life forms varied
over time and certain life forms are restricted to certain geological
time spans.
New forms of life have arisen at different times in the history of earth.
Geological history of earth closely correlates with the biological history
of earth.
Age of fossil calculated by
1) Radioactive clock method
2) Carbon dating technique.
Brief account of evolution
Invertebrates active 500 mya
Jawless fish evolved 350 mya
See weed and few plants existed 320 mya
1st organisms invaded land plants
Fish with shout and strong fins (coelacanth) 350 mya
Coelacanth fish caught in South Africa (1938)
Lobe fins
Lobe fins Amphibians.(ancestors of modern day frogs and
salamanders.
Amphibians Reptiles (Turtles, tortoise, Crocodile, etc)
Next 200mya - reptiles of different shape and size dominated on earth.
(Mesozoic era)
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Biggest dinosaur Tyranosaurus - (20 feet height) (with huge
fearsome dagger like teeth.
Extinction of dinosaur - 65 mya (due to climatic change, most of them
evolved into birds etc.
Small sized reptiles of mesozoic era still existed.
First mammals - shrew like
Line of evolution of birds
Early reptiles Sauropsids Thecodont Dinosaur Bird
Line of evolution of mammals
Early reptiles Synapsids Pelycosaurs Therapsids
Mammals
Evolution of plants
First plants colonised on land - Bryophytes
All plants except bryophytes and lycopods evolved from psilophyton
Line of evolution of angiosperms
Psilophyton Progymnosperms Seed ferns Angiosperms
Embryological support for evolution
Proposed by Ernst Heckel
Certain features during embryonic stage common to all vertebrates
but are absent in adult
eg : Presence of vestigeal gill slits in all vertebrate embryos but that
are functional organ only in fish.
Karl Ernst Von Baer disapproved their proposal.
According to him “embryos never pass through the adult stages of
other animals”.
Morphological and Anatomical evidences
Comparitive anatomy and morphology shows similarities and
differences among organisms.
1. Homologus organs Similar in anatomy doing dissimilar functions.
eg : - 1) Fore limb pattern of man, bat, whale and cheetah.
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Convergent evolution
Example : -
Placental and marsupials of Australia
When more than one adaptive radiation occur in an isolated
geographical area. (represent different habitat) lead to convergent
evolution.
Theories of Evolution
1) Lamarckism
French naturalist Lamarck
Two key concepts :
1) Use and disuse of organs
2) Inheritance of acquired characters.
Example : Long neck and forelimbs in giraaffe.
2) Darwinism - (Theory of Natural Selection)
Proposed by Charles Darwin
Work of Thomas Malthus on population influenced Darwin.
Key concepts:-
1) Branching descent
2) Natural selection.
Postulates of Darwinism
1) Over production
2) Struggle for existance
3) Variation - According to Darwin variation are small, slow, directional,
continuous.
4) Natural selection/Survival of fittest.
Fittest individuals are selected
Fitness is the end result of the ability do adapt and get selected by
nature.
Fitness according to Darwin is reproductive fitness.
5) Inheritance of favourable variation
6) Speciation
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p q 1 or p 2 2pq q 2 1
2
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CHAPTER - 07
HUMAN HEALTH AND DISEASE
Health - The state of complete physical, mental and social well being.
Health is affected by: -
1) Genetic disorders 2) Infections
Health is maintained by
1) Balanced diet 2) Personal hygiene
3) Regular exercise 4) Immunisation
5) Control of vectors
Affected
Disease Pathogen Symptoms
body parts
High fever,
Typhoid Weakness, Intestinal
1 Salmonella typhi
(widal test) Constipation, perforation
Head ache
Diarrhoea,
3 Dysentery Shigella species Colon
Stomach pain
Swollen lymph
Plague
4 Yersinia pestis nodes, Lymph nodes
(Black death)
fatigue, fever
Corynebacterium Fever, Chills, Skin and
5 Diphtheria
diphtheriae Sore throat respiratory tract
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Viral Diseases
nasal congestion
Common and discharge, Nose, Upper
1 Rhino virus
cold sore throat, respiratory tract
Hoarseness, cough
Protozoan Diseases
Plasmodium vivax
Plasmodium malariae
1 Malaria Chills, high fever Liver cells, RBC
Plasmodium ovale
Plasmodium falciparum
Constipation,
Amoebiasis
abdominal pain,
2 (Amoebic Entamoeba histolytica Large intestine
stool with mucus
dysentery)
and blood clot
Helminth Diseases
internal bleeding,
muscular pain
1 Ascariasis Ascaris lumbricoides blockage Intestine
of the intestinal
passage
lymphatic vessels lymphatic vessels of
Filariasis Wuchereria bancrofti
2 of lower limbs get lower limbs and genital
(Elephantiasis) Wuchereria malayi
blocked organs
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Fungal Diseases
Affected
Disease Pathogen Symptoms
organs
1) Microsporum dry, scaly
Ring skin,
1 2) Trichophyton lesions
worms nail, scalp
3) Epidermophyton on the skin
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1. Primary immune response :- low intensity response on first
encounter with a pathogen
Types of Antibodies
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Structure of Antibodies
Quick in response,
2 Slow to act, but long lasting
but short lived
Immunity obtained by natural
obtained by injecting
3 infection or by introducing
pre-formed antibodies
antigens (vaccination)
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Vaccination and Immunisation are based on property of ‘memory’
of immune system.
Vaccination is the act of introducing a vaccine into the body to obtain
immunity to a specific disease.
Vaccine - preparation of antigenic proteins of pathogen or inactivated
/weakened pathogen.
IgA in colostrum, Antivenom are examples of passive immunity.
Allergies - exaggerated response to certain antigens/allergens.
Antibodies involved in allergic response is IgE. In allergy, chemicals
like histamine and serotonin are secreted from mast cells.
Autoimmunity results from inability to differentiate self from non-self
cells.
Rheumatoid arthritis, Myasthenia gravis, Multiple sclerosis etc are
examples of autoimmune diseases.
Immune system in the body
Immune system includes : - Lymphoid organs, tissue cells and
antibodies.
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3. Sharing of infected needles as in intravenous drug users
4. Passing through placenta to child.
Diagnostic test for AIDS ELISA
Confirmatory test for AIDS Western blot
CANCER - major cause of death all over the globe.
Characteristic of cancer cells
1. Break down of regulatory mechanism of cell growth and differentiation.
2. Loss of contact inhibition
3. Uncontrolled proliferation cause or develop tumor.
Leukemia is a tumorless cancer.
4. Metastasis is the most feared property of malignant tumor
Types of tumor
4 Non-cancerous Cancerous
Causes of cancer
1. Viral oncogenes
2. Cellular oncogenes(c-onc) /proto-oncogenes
3. Radiations
4. Chemical carcinogens (eg: in tobacco smoke)
Methods of cancer detection and diagnosis
1. Biopsy and histopathological studies
2. Blood and bone marrow test
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Treatment of cancer
3. Chemotherapy 4.Immunotherapy
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Causes of drug abuse.
1. Curiosity, 2. Need for adventure and excitement
3. Experimentation, 4. Pressure to excel in examination
Effects of drug/alcohol abuse
1. Drop in academic performance
2. Unexplained absence from school/college
3. Lack of interest in personal hygiene
4. Isolation and depression
5. Deteriorating relationship with family and friends
Anabolic steroids are misused by sports persons.
Withdraw al symptoms - Symptoms manifested on
abrupt discontinuation of regular dose of drugs or alcohol.
Prevention and control
1. Avoid undue peer pressure
2. Educating and counselling
3. Seeking help from parents and peers
4. Seeking professional and medical help.
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CHAPTER - 08
MICROBES IN HUMAN WELFARE
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Production of toddy, fermentation of fish, soyabean and bamboo
by various microbes
Production of cheese
• by bacteria and fungi
• Swiss cheese by Propionibacterium sharmanii
• Roquefort cheese (Blue cheese) by fungi (Penicillium roqueforti)
2) Microbes in Industrial production
• Fermented beverages contains ethanol (produced by yeast)
• Production of large scale requires large vessels called fermentor.
Fermented beverages :- From fermented broth
Non-distilled Distilled
eg: Wine, Beer eg: Whisky, Brandy and Rum
Antibiotics :
• Chemicals produced by microbes can kill or destroy other microbes.
eg: Pencillin -by Alexander Flemming
• It is “against-life” with respect to disease causing microbes, while
“Pro-life” with respect to humans.
• Fully potential and effective antibiotic was established by Ernst Chain
and Howard Florey. They recieved Nobel Prize along with Flemming
in 1945.
Organic acids :
• Citric acid Aspergillus niger (fungus)
• Acetic acid Acetobacter aceti (bacteria)
• Butryic acid Clostridium butylicum (bacteria)
• Lactic acid Lactobacillus (bacteria)
Enzymes :
• Lipase-used in laundry detergents
• Pectinase and protease - Clarification of bottled juice
• Streptokinase from streptococcus - Clot buster.
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Bioactive molecules
• Cyclosporin A - from Trichoderma polysporum (fungi)
• used as immunosuppressive agent.
• Statin - from Monascus purpureus (yeast)
• used as blood chloesterol lowering agent.
3) Environment related processes
Microbes in sewage treatment
• Muncipal waste water (sewage) contains large amount of organic
matter and microbes.
• The major component of waste water- human excreta.
• Treatment of sewage is done by heterotrophic aerobic microbes
naturally present in sewage.
sedimentation
d
* Floculation (consumption of
pe
m
as inoculum
* Allow to settle
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Microbes in biogas production
• Biogas a mixture of CH4, CO2 and H2
• Major component - CH4
• Gas produced depends upon substrate used and microbes involved.
• Most important part of a biogas plant - digester, where anaerobic
micorbes like methanogen splits
cellulosic materials into methane (CH4).
• Cow dung is the major source of methanogen bacteria such as
methanobacteria.
• In India, it is popularised by IARI and KVIC.
4) Microbes in Agriculture
Biocontrol of plant disease and pests
• It emphasises reduced use of chemicals and enhance biological
methods.
Examples:
Bacillus thuringiensis (Bt) against insect larva and caterpillars
Trichoderma against soil born root pathogens
Baculoviruses such as nucleopolyhedrovirus against insects and
arthropods.
Lady bird and Praying mantis against aphids.
Dragon fly against mosquitoes
Biofertilizers
• Microbes that enrich soil fertility (especially nitrogen)
• Rhizobium and Frankia - Symbiotically fix Nitrogen.
• Azotobacter and Azospirillum - free living Nitrogen fixing.
• Glomus - most common mycorrhizal fungi
(Mycorrhizae mainly influce plant rather than soil)
• Cyanobacteria - N2 fixing, a common bio-fertilizer in paddy field.
• Eg: Nostoc and Anabaena- fix nitrogen both in symbiotic and free-
living conditions.
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CHAPTER - 09
BIODIVERSITY AND CONSERVATION
India has only 2.4% world’s land area, while it comprises 8.1% of
global diversity.
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Patterns of Biodiversity
(i) Latitudinal gradients - Diversity decreases with increase in
Latitude.
Species diversity maximum near to equator (23.5oN - 23.5oS) and
minimum in polar region.
Eg. Columbia located near to equator - has 1,400 sps. of birds
New York (41oN) - has 105 sps. of birds
Green land (71oN) - has 56 sps. of birds
Amazone rain forest - has 1,300 sps. of birds
India in subtropical region - has 1,200 sps. of birds
The main reasons for greater diversity in tropical regions
1. It had a long evolutionary time for species diversification.
2. Tropical environments are less seasonal, relatively more constant
and predictable.
3. Availability of more solar energy
(ii) Species - Area Relationships - Proposed by Alexander von
Humboldt
Species diversity increased with increasing explored area but
only upto a limit.
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After Effect
1. Decline in plant production
2. Lowered resistance to environmental stresses
3. Variation in Ecosystem processes
Causes of Loss of Biodiversity (Evil Quadret)
1. Habitat loss and fragmentation (most important cause)
2. Over-exploitation
3. Alien species invasion
4. Co-extinction
Biodiversity Conservation
Bioprospecting
Exploring molecular, genetic and species level diversity for
economically important products.
Biodiversity Conservatoin
In situ Ex situ
(conservation within (Conservation outside the habitat)
their natural habitat)
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