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1. AEROMICROBIOLOGICAL PATHWAY
The aero microbiological pathway describes:
(1) The launching of bioaerosols into the air; (2) the subsequent transport via diffusion and dispersion of
these particles; and finally (3) their deposition. An example of this pathway is that of liquid aerosols
containing the influenza virus launched into the air through a cough, sneeze, or even through talking.
These virus-associated aerosols are dispersed by a cough or sneeze, transported through the air,
inhaled, and deposited in the lungs of a nearby person, where they may begin a new infection (Fig. 1.2).
Traditionally, the deposition of viable microorganisms and the resultant infection are given the most
attention, but all three processes (launching, transport, and deposition) are of equal importance in
understanding the aerobiological pathway.
1.1 Launching
The process whereby particles become
suspended within Earth’s atmosphere is
termed launching. Because bioaerosols must
be launched into the atmosphere to be
transported, it is important to understand this process. The launching of bioaerosols is mainly from
terrestrial and aquatic sources, with greater airborne concentrations or atmospheric loading being
associated with terrestrial sources than with aquatic sources. Some researchers speculate that there
may even be atmospheric sources of bioaerosols in addition to terrestrial and aquatic ones. This
phenomenon is related to the limited potential for microorganisms to reproduce while airborne. This,
however, is an area of aeromicrobiology for which there is little available information. Launching into
the surface boundary layers can include, but is certainly not limited to, diverse mechanisms such as the
following: air turbulence created by the movement of humans, animals, and machines; the generation,
storage, treatment, and disposal of waste material; natural mechanical processes such as the action of
water and wind on contaminated solid or liquid surfaces; and the release of fungal spores as a result of
natural fungal life cycles. Airborne particles can be launched from either point, linear, or area sources. A
point source is an isolated and well-defined site of launching such as a pile of biosolid material, before it
is applied over the field. Point sources tend to display a general conical-type dispersion ( Fig. 1.5 ). Point
sources can be further defined on the basis of
the type of launching phenomenon: (1)
instantaneous point sources, for example, a
single event such as a sneeze, or (2)
continuous point sources, from which
launching occurs over extended periods, such
as the biosolid pile. In contrast to point
sources, linear sources and area sources
involve larger, less well-defined areas. When
considered on the same size scale, linear and
area sources display more particulate wave
dispersion as opposed to the conical type of
dispersion displayed by point sources. Linear
and area sources can also be divided into
instantaneous and continuous launching
points of origin. For example, an
instantaneous linear source might be a passing aircraft releasing a biological warfare agent ( Fig. 1.6 ). A
continuous area source might be exemplified by release of bioaerosols from a large field that has
received an application of biosolids.
1.2 Transport
Transport or dispersion is the process by which kinetic energy provided by the movement of air is
transferred to airborne particles, with resultant movement from one point to another. This “ energy of
motion ” gained by airborne particles is considerable and can result in dissemination of airborne
microorganisms over long distances. Transport of bioaerosols can be defined in terms of time and
distance. Submicroscale transport involves short periods of time, under 10 minutes, as well as relatively
short distances, under 100 m. This type of transport is common within buildings or other confined
spaces. Microscale transport ranges from 10 minutes to 1 hour and from 100 m to 1 km and is the most
common type of transport phenomenon. Mesoscale transport refers to transport in terms of days and
distances up to 100 km, and in macroscale transport, the time and distance are extended even further.
Because most microorganisms have limited ability to survive when suspended in the atmosphere, the
most common scales considered are the submicroscale and microscale. It should be noted, however,
that some viruses, spores, and sporeforming bacteria have been shown to enter into mesoscale and
even macroscale transport. Other studies have shown that coliforms aerosolized from sewage treatment
plants have been transported over 1.2 km (mesoscale). Another interesting example is influenza
pandemics. Pandemics are epidemics that occur over a wide geographic area, and influenza has been
shown to spread from east to west around the world. These pandemics have been positively correlated
with the prevailing trade winds and can be considered global transport.
For example, the Asian flu epidemic of 1957 is believed to have started in central China and from there it
quickly spread to Africa, Australia, and the Americas. Now there is concern that avian flu could similarly
spread, causing another pandemic. There has been great concern over the potential for an avian bird flu
pandemic. Avian bird flu or avian influenza is an infectious disease of birds caused by type A strains of
the influenza virus. The highly pathogenic forms are due to influenza viruses of subtype H5 and H7. Of
particular concern is H5N1 virus, which is
capable of infecting humans. However,
bird to human transmission requires
close and intimate contact. Human to
human transmission has not been
documented. Likewise, no airborne
transmission has been documented, but the
potential for aerosolization of the
virus certainly exists.
The limiting value for the Reynolds equation is usually considered to be 2000, with values above this
number indicating turbulent conditions. The higher the value, the higher is the relative turbulence of the
airflow, and the higher the turbulence of the airflow, the greater is the microorganism-associated
particle diffusion that occurs per unit time. In the preceding example, one would expect a great deal of
turbulence around the bush, which would increase the diffusion rates of passing bioaerosols.
1.3 Deposition
The last step in the AMB pathway is deposition. An airborne bioaerosol will eventually leave the
turbulence of the suspending gas and will ultimately be deposited on a surface by one or a combination
of interrelated mechanisms. These mechanisms are discussed in the following sections and include
gravitational settling, downward molecular diffusion, surface impaction, rain deposition, and
electrostatic deposition, to name a few of the most important. These processes are linked in many ways,
and even though viewed separately, they all combine to create a constant, if not steady, deposition of
particles.
Water is one of the most essential requirements for life. Thus, its availability becomes most important
factor for the growth of microorganisms. The availability of water depends on two factors — the water
content of the surrounding environment and the concentration of solutes (salts, sugars, etc.) dissolved
in the water.
In most cases, the cell cytoplasm possesses higher solute concentration in comparison to its
environment. Thus, water always diffuses from a region of its higher concentration to a region of the
lower concentration.
All forms of life are greatly influenced by temperature. In fact, the microorganisms are very sensitive to
the temperature since their temperature varies with that of environment (puikilothermic).
Temperature influences the rate of chemical reactions and protein structure integrity thus affecting
rates of enzymatic activity. At low temperature enzymes are not denatured, therefore, every 10°C rise in
temperature results in rise of metabolic activity and growth of microorganisms.
However, enzymes have a range of thermal stability and beyond it their denaturation takes place. Thus,
high temperature kills micro-organism by denaturing enzymes, by inhibiting transport carrier molecules
or by change in membrane integrity. Each microbe shows characteristic temperature dependence and
possesses its own cardinal temperatures i.e. minimal, maximum and optimal growth temperatures
The pH scale extends from pH 0.0 to pH 14.0 and each pH unit represents a tenfold change in hydrogen
ion concentration. The pH of a solution reveals whether the solution is acidic, alkaline or neutral. A
neutral solution contains pH equal to 7. The acid solution shows pH below 7, while alkaline solution
exhibit pH above 7.
Factor # 4. Oxygen Requirements:
The atmosphere of earth contains about 20% (v/v) of oxygen. Microorganisms capable of growing in the
presence of atmospheric oxygen are called aerobes whereas those that grow in the absence of
atmospheric oxygen are called as anaerobes.
The micro-organisms that are completely dependent on atmospheric oxygen for growth are called
obligate aerobes whereas those that do not require oxygen for growth but grow well in its presence are
called as facultative anaerobes.
Aerotolerants (e.g. Enterococcus faecalis) ignore O 2 and can grow in its presence or absence. In contrast,
obligate anaerobes (e.g., Bacteroids, Clostridium pasteurianum, Furobacterium) do not tolerate the
presence of oxygen at all and ultimately die. Few microorganisms (e.g., Campylobacter) require oxygen
at very low level (2-10%) of concentration and are called as microaerophiles (Fig. 19.16). The latter are
damaged by the normal atmospheric level of oxygen (20%)
Normal life of microorganisms on land or on the water surface is always subjected to a pressure of 1
atmosphere. But, they are many microbes that survive in extremes of hydrostatic pressure in deep sea.
Others are there that not only survive rather grow more rapidly at high pressures (e.g., Protobacterium,
Colwellia, Shewanella) and are called barophilic.
Some archaebacteria are thermobarophiles (e.g., Pyrococcus spp., Methanococcus jannaschii). However,
A barophile has been recovered from the depth about 10,500 m in sea near Philippines and has been
found unable to grow at 2°C temp, and below about 400-500 atmospheric pressure.
Some electromagnetic radiations, particularly the ionizing radiation (e.g., X-rays, gamma rays) are very
harmful to microbial growth. Low levels of these radiations may cause mutations and may indirectly
result in death whereas high levels may directly cause death of the microbes.
Ionizing radiation, however, destroys ring-structures, breaks hydrogen bonds, oxidizes double bonds and
polymerizes certain molecules. Ultraviolet (UV) radiation is lethal to all categories of microbial life due to
its short wavelength and high-energy; the most lethal UV radiation has a wavelength of 260 nm.
Ultraviolet radiation primarily forms thymine dimers in DNA to cause damage. Two adjacent thymines in
a DNA strand join each other covalently and inhibit DNA replication and function. Microbial
photosynthetic pigments (chlorophyll, bacteriochlorophyll, cytochromes and flavins), sometimes, absorb
light energy, become excited or activated, and act as photosensitizers.