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CCHM 312: Week 2: Enzymes
CCHM 312: Week 2: Enzymes
CCHM 312
LECTURE / SECOND SEMESTER
Dianne Rose C. Mendoza, RMT, MPH
WEEK 2: ENZYMES
ENZYMES Examples:
BIOLOGIC PROTEINS that catalyze biochemical reactions without altering the (a) OXIDASE - cytochrome oxidase
equilibrium point of the reaction or being consumed or changed in composition
(b) DEHYDROGENASE
Major structure is APOENZYME which protein in nature
catalyze biochemical reactions = means enzyme molecule can readily speed o lactate dehydrogenase (LDH)
up hasten the rate of chemical reaction o malate dehydroenase (MDH)
Enzymes are liberated as FREE ENZYMES at the end of the reaction o isocitrate dehydrogenase (ICD)
According to the name of the substrate with the addition of the suffix “ASE” 3. HYDROLASE - hydrolyze the splitting of a bond by the addition of WATER
(hydrolysis reaction)
Examples:
Examples:
o Enzymes acting on lipids – LIPASE
o Enzymes acting on proteins – PROTEASE (a) ESTERASES
o Amylate, kAMS)
SYSTEMATIC NAME o Amylo 1,6 glycosidase
o Galactoxsdases
According to the numerical designation given by the Enzyme Commission (E.C.)
Examples:
The first number defines the CLASS to which the enzyme belongs, while the next two (a) aldolases
numbers indicate SUBCLASS and sub class to which the enzyme is assigned. The last
number Is a SPECIFIC SERIAL NUMBER to each enzyme in its sub-class. (b) glutamate decarboxylase
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5. ISOMERASES - catalyzes the intramolecular rearrangement of the substrate In such, the metal ion may serve as:
compound.
o a BRIDGE to hold the substrate and enzyme together
Examples: o the primary catalytic center
o stabilizing agent in the conformation for catalytic activity.
(a) glucose phosphate isomerase
Examples:
(b) ribose phosphate lsomerase
Amylase Cl, Br-
6. LIGASES (Synthetases) - joins two substrate molecules together using the energy
released from hydrolyzing a pyrophosphate bond to a high energy phosphate compound. LDH Zn2
An enzyme molecule can either be released as an ACTIVE or INACTIVE A. An enzyme (E) catalyses a reaction by combining with its substrate (S) to create an
enzyme—substrate complex (ES). The enzyme-substrate complex according to
HOLOENZYME - an ACTIVE substance formed by combination of a coenzyme Michaelis and Menten can either dissociate back to E + S or breakdown to product (P)
(cofactor) and apoenzyme. and free enzyme (provided that the product has a low affinity for the enzyme).
Ex: ALP
METALLOENZYME - enzyme whose metal ions are intrinsically part the molecule
such as catalases and cytochrome oxidase.
Ex: Pepsinogen in the stomach which will require hydrochloric acid to be TYPES OF SPECIFICITY
converted into Pepsin which is already an active molecule
ABSOLUTE SPECIFICITY – enzymes combine with ONLY ONE substrate and
SUBSTRATES - substances acted upon by the enzymes which are specific for each of catalyzes ONLY ONE corresponding reaction
their particular enzyme.
GROUP SPECIFICITY – enzymes combining with ALL substrates containing a
COFACTORS - these are NON-PROTEIN substance/compounds needed by an particular chemical group
enzyme before enzymatic activity can be manifested. Cofactors are THERMOSTABLE
and DIALYZABLE. BOND SPECIFICITY – enzymes are specific to chemical bonds
Examples: It is based on the rigid enzyme molecule into which the substrate fits. The shape of the
KEY (SUBSTRATE) must conform into the LOCK (ENZYME).
o NAD – nicotinamide Adenine dinucleotide
o NADP - nicotinamide Adenine dinucleotide phosphate
ENZYME INDUCTION:
This phenomenon states that a certain enzyme has the ability to ADAPT to their
biochemical systems
It is based on the attachment of a substrate to the active site of an enzyme, which then TYPES OF ENZYME ASSAYS
causes conformational changes in the enzyme. This theory is MORE ACCEPTABLE
because the protein molecule is flexible enough to allow conformational changes and also ENDPOINT ANALYSIS
allow some explanation on the influence of hormones on enzymatic activity.
o Reaction is initiated by ADDITION of substrate
o Reaction is allowed to proceed for a period of time
o Measurement is done at the END of the reaction
o DISADVANTAGE: underestimation of the “true” enzyme activity and
linearity of reaction CANNOT BE OBSERVED
1. ZERO ORDER REACTION - is the rate of reaction linear with time, independent
of concentration of substrate and DIRECTLY PROPORTIONAL to enzyme
concentration.
KASAHARA ALP
QUALITY CONTROL PROGRAM FOR ENZYME ASSAYS
– hepatoma/hepatocellular carcinoma
Strict adherence to ZERO-ORDER KINETICS
Proportionality with increments of sample
Use of pooled frozen serum or stable reference materials as controls METHODS OF DETERMINATION
Replicate measurements to evaluate precision of assays
BOWERS and MC COMB (continuous-monitoring technique)
pH: 10.15
SPECIFIC ENZYMES Wavelength: 405 nm
p-nitrophenylphosphate ------------- p-nitrophenol + phosphate ion
PHOSPHATASES
o Placental isoenzyme Assays to measure ALP activity use p-nitrophenylphosphate substrate at an alkaline
o Intestinal isoenzyme pH.
o Liver isoenzyme
Activators for this enzyme are Zinc, Magnesium. and other Cations,
o Bone isoenzymes.
o Isoenzymes CHELATORS (such as EDTA, citrate, oxalate) can FALSELY LOWER activity.
- lung, breast, ovarian and gynecological cancers LIVER and BONE DISEASES (most common causes)
- Bone ALP co-migrator
- MOST HEAT STABLE Hepatic causes including CHOLESTASIS.
- inhibited by PHENYLALANINE REAGENT
Osteosarcoma, tumor metastates to bone (increases osteoblastic activity; ii turn, increases
bone ALP activity)
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DIABETES, Renal Failure - GAUCHER'S CELLS
- Hairy cell leukemia
GERM CELL TUMORS (such as seminoma, dysgerminoma) causes ELEVATED
PLACENTA – like isoenzymes; as well as serous carcinoma of the ovary,
nonseminomatous germ cell tumors, endometrial carcinoma, and leukemia.
CHEMICAL INHIBITION TECHNIQUE
DECREASED ALP
o Neimann-Pick disease
ACID PHOSPHATASE (EC 3.1.2.3) or ACP o Gaucher’s disease
o Myelocytic leukemia
- ACP is a HYDROLYTIC ENZYME secreted by a number of cells.
- There are several isoenzymes of ACP, each with tissue specificity. Isoenzymes
may be fractionated into FIVE (5) BANDS AMINOTRANSFERASES
Catalyzes the transfer of an amino group of one amino acid to a hydrocarbon to form a
different amino acid
ACP ISOENZYMES
Aminotransferases are of two types:
BAND 1, the MAJOR SOURCE is PROSTATE GLAND. Prostatic ACP activity is
inhibited by TARTRATE. o Aspartate Aminotransferase (EC 2.6.1.1) or AST
o Alanine Aminotransferase (EC 2.6.1.2) or ALT
BAND 2 and 4 isoenzymes are from GRANULOCYTES.
BAND 3 is the major form present in PLASMA. This isoenzyme (band 3) is derived COFACTOR pyridoxal-S'-phosphate or P-5’-P
from platelets, erythrocytes, and monocytes.
ALT
BAND 5 is found mainly in OSTEOCLASTS. This isoenzyme, (band 5) is
RESISTANT to TARTRATE inhibition. ¨ L-alanine + alpha ketoglutarate « pyruvate + glutamate
AST
SPECIMEN STABILITY
TARTRATE-RESISTANT ACP (BONE ISOENZYME) Has 2 isoenzymes fractions: CYTOPLASM and MITOCHONDRIAL
- Active osteoclast-mediated bone resorption MAJOR tissue source: CARDIAC TISSUE, LIVER and SKELETAL MUSCLES
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Other sources: kidney, pancreas and RBC o Diagnosis of ACUTE or CHRONIC VIRAL HEPATITIS ALT
increases to a greater degree than AST
REFERENCE VALUES: 5 - 37 U/L
Monitors the course of hepatitis treatment and the effect of drug therapy
In the course of active muscle contraction. ATP is used up and creatine phosphate is
converted by CK to creatine and ATP. This process allows continued contraction.
CLINICAL SIGNIFICANCE (INCREASED AST activity)
During periods of rest, ATP is converted to CREATINE PHOSPHATE by CK to
In the evaluation of myocardial infarction, hepatocellular disorders and skeletal muscle serve as ENERGY RESERVOIR.
involvement
Creatine kinase requires MAGNESIUM as a COFACTOR.
MI AST level is usually 4-10 times the upper limit of normal
CK2 or CK-MB (normal muscle contains 14% to 20% of CK-MB; in skeletal muscle,
CLINICAL SIGNIFICANCE (DECREASED AST activity) CK-MB comprises 0% to 1% of total CK in type 1 fibers, and 2% to 6% of total CK
in type 2 fibers).
¨ DECREASED level is seen during PREGNANCY
CK3 or CK-MM. (also found in SKELETAL MUSCLES)
Has enzymatic activity similar to AST REFERENCE VALUE: 15-160 U/L Male
Highest concentration is in the LIVER
15-130 U/L Female
Other sources: kidney, pancreas, RBC, heart, skeletal muscles, lungs
REFERENCE VALUES: 6 - 37 U/L 6% of total CK CK-MB
METHOD OF DETERMINATION
o CK-BB MOST RAPIDLY moving isoenzyme
- Coupled Enzymatic reaction: pH 7.5; 340 nm o CK-MB HYBRID
- REITMAN-FRANKEL METHOD
o CK-MM SLOWEST and MOST COMMON form
DIAGNOSTIC SIGNIFICANCE
o AMI
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METHODS OF DETERMINATION o MI (less than 5% of the causes)
GGT catalyzes the transfer of GLUTAMYL MOIETY from peptides to amino acids,
other peptides, or water molecules.
GGT are PLASMA MEMBRANE BOUND on cells that has high secretory or
absorptive properties (such as liver, canaliculi cells proximal renal tubules, intestinal
epithelium, and prostate gland).
MEASUREMENT
OLIVER-ROSALKI METHOD (REVERSE / indirect method)
o SZASZ ASSAY
o GGT activity is measured by cleavage of chromogeno-carboxyl p-
pH 6.8 @ 340 nm
“MOST COMMONLY USED” nitroaniline from a glutamate modified form of the compound.
Faster Reaction
GGT ELEVATIONS
SMOKING Moderate smoking raises GGT levels by 10%, while heavy smoking
by 20%.
Medications increase GGT levels up to five (5) times normal, these drugs include
ethanol, phenytoin, barbiturates, carbamazepine, and valproic acid.
CONSIDERATIONS IN CK ASSAYS:
GGT DECREASE
- CK is LIGHT SENSITIVE
- Anticoagulants (Oxalates and Fluoride) inhibits CK action Pregnancy First trimester of pregnancy causes 25% DECREASE in GGT levels
- CK in serum is VERY UNSTABLE and is rapidly lost during storage
Oral contraceptives reduce GGT by 20%.
activity can be regenerated by adding substances with –SH groups (CYSTEINE,
DITHIOTHREITOL, MERCAPTOETHANOL)
USES OF GGT
- Exercise and IM injections causes CK ELEVATIONS
- Evaluation of liver injury (PRIMARY USE)
CK levels are increased in:
- Test for alcoholic abuse (It is abnormal in only 30%, 50% of those consuming
o Progressive muscular dystrophy excessive amounts of alcohol. More often elevated in maintenance drinkers rather
o Poliomyelitis than alcohol drinkers)
o Acute psychosis
o Alcoholic myopathy
o Delirium tremens LACTATE DEHYDOGENASE (EG 1.1.1.27) or LD
o Hypothyroidism
o Malignant hyperthermia LD is a ZINC-CONTAINING ENZYME and its activity is part of the GLYCOLYTIC
o Acute cerebrovascular disease PATHWAY.
o Trichinosis and dermatomyositis
LD is a TERTRAMER of two active subunits, H (for heart) and M (muscle).
Combinations of the subunits produce five isoenzymes.
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REFERENCE VALUES: MOST SPECIFIC PANCREATIC MARKER: secreted exclusively in the pancreas,
not affected by renal disorders
FORWARD Reaction - 100-225 U/L
REVERSE reaction - 80-280 U/L
¨ HIGHEST LEVEL are seen in Pernicious Anemia and Hemolytic Disorders 0 - 1.0 U/mL
Optimum pH: 7.8 - 8.0
¨ Hepatic carcinoma and toxic hepatitis – 10 fold increase
Opiates and morphines increases LPS activity due to its spastic effect on the
duodenal musculature and Sphincter of Oddi
WROBLEWSKI LA DUE (REVERSE/indirect reaction)
DIAGNOSTIC SIGNIFICANCE
In acute pancreatitis, lipase levels rise 6 hours after onset of attack, peak at 24 hours,
remains elevated for 7 days, and normalize in 8-14 days
In chronic acute pancreatitis, acinar cell degradation occurs resulting in loss of amylase
and lipase production
AMYLASE/DIASTASE E.C. 3.2.1.1
LPS is also ELEVATED pancreatic duct obstruction and tumors of the pancreas
Catalyzes the breakdown of STARCH
SMALLEST ENZYME
EARLIEST Pancreatic Marker OTHER ENZYMES
Isoenzymes: S-type (PTYALIN); P-type (AMYLOPSIN)
GLUCOSE-6-PHOSPHATE DEHYDROGENASE
REFERENCE VALUES:
- OXIDOREDUCTASE
LIPASE
An enzyme that hydrolyzes the ester linkages of fats to produce ALCOHOL and
FATTY ACIDS
5’ NUCLEOTIDASE (5’ N)
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Used to differentiate obstructive from hepatocellular jaundice and hepatobiliary from Disease Correlation
osseous disease
o Most common reason for ordering ACE levels is for diagnosing and
monitoring SARCOIDOSIS.
Increased post-hepatic jaundice, intrahepaticcholestasis and infiltrative lesions of
o As the disease progresses to FIBROSIS, ACE levels DECLINE.
liver
o ACE ELEVATIONS are also seen PULMONARY INVOLVEMENT.
MYELOPEROXIDASE
Normal bone disease
Hydrogen peroxide oxidoreductase
EXCELLENT MARKER for LIVER DISEASE but it is RARELY USED CLINICAL SIGNIFICANCE: MPO is released into the extracellular fluid and
general circulation during INFLAMMATORY conditions
MEASUREMENT
ENZYMES AS MARKERS OF HEPATIC DISORDERS
Most activity is present in the LUNGS but it is found in ENDOTHELIAL CELLS ENZYMES FOR MYOCARDIAL INFARCTION
throughout the body.
MEASUREMENT
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