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Gene regulation

Gene regulation in prokaryotes

Regulation achieved in various stages in gene


expression
Gene regulation

Gene regulation in prokaryotes

• Constitutive gene expression

• Inducible gene expression


• +ve and –ve control

• Repressible gene expression


• +ve and –ve

• efector molecules (inducers, repressors, etc)


• allosteric transitions
• operons
• factors and elements (cis and trans)
Gene regulation

Inducible systems
Gene regulation

Repressible systems
Gene regulation

System Effector -ve regulation +ve


Molecule (Repressor) regulation
(Activator)

Inducible - inducer ☓ ☓

+ inducer ✓ ✓

Reprssible - ✓ ✓
co-repressor
+ ☓ ☓
co-repressor
Gene regulation

The Operon Model (-ve) by Jacob and Monod 1961


Gene regulation

The operon: induction


Gene regulation

The operon: repression


Gene regulation

The lac (lactose) operon : induction and catabolite repression


• negatively controlled inducible operon, i.e. the lac genes are
only expressed in the presence of lactose
Gene regulation

The lac (lactose) operon : induction and catabolite repression


• negatively controlled inducible operon, i.e. the lac genes are
only expressed in the presence of lactose

System Effector -ve regulation +ve regulation


Molecule (Repressor) (Activator)

Inducible - inducer ☓ ☓
+ inducer ✓ ✓
Repressible - ✓ ✓
co-repressor
+ ☓ ☓
co-repressor
Gene regulation

Inducer
Gene regulation

function of lac I, lac operator


and lac promoter were
identified genetically by
isolation of mutant strains.
• the involvement of trans
factors and cis elements
Gene regulation

lac I = cis and trans

Operator = cis
Gene regulation

Carbon Catabolite Repression


The presence of glucose also leads to the repression of lac
operon

CAP = Catabolite Activator Protein (regulatory protein)


cAMP = cyclic AMP (Adenosine-3’, 5’- monophosphate (effector molecule)
Gene regulation

cAMP binds to CAP → CAP-cAMP complex binds to CAP


site → Lac Z, Y, A Transcription ON

In the presence of glucose


Glucose → adenylcyclase → cAMP → Lac Z, Y, A
transcription ON
Gene regulation

Catabolite repression = presence of glucose also leads to


the repression of lac operon
cAMP = effector
molecule, produced
from ATP by
adenylcyclase. cAMP
binds to CAP (or
CRP).
Presence of glucose
inhibits adenylate
cyclase cAMP level
is low no
cAMP/CAP binding
no CAP site
binding no Allows ‘choosing’ of glucose over
lactose
activation.
Gene regulation
Gene regulation
Gene regulation
Gene regulation

Trp operon = -ve repressible operon


Gene regulation

Trp operon = -ve repressible operon

System Effector -ve regulation +ve regulation


Molecule (Repressor) (Activator)

Inducible - inducer ☓ ☓
+ inducer ✓ ✓
Repressible - ✓ ✓
co-repressor
+ ☓ ☓
co-repressor
Gene regulation

Trp operon = Attenuator


(2nd level of trp operon
regulation)

Attenuator: the sequence in


trpL

“premature” termination of
trp operon transcription
occurs only in the presence
of tryptophan-charged
tRNATrp

Pairing between regions


decide whether or not to
Leader peptide = introductory region of the terminate transcription
attenuator mRNA
Gene regulation
Gene regulation
Gene regulation
Gene regulation

System Effector -ve regulation +ve regulation


Molecule (Repressor) (Activator)

Inducible - inducer ☓ ☓
+ inducer ✓ ✓
Repressible - ✓ ✓
co-repressor
+ ☓ ☓
co-repressor

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