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The Use of Micro-Energy Dispersive X-Ray Fluorescence Spectrometry
The Use of Micro-Energy Dispersive X-Ray Fluorescence Spectrometry
A R T I C LE I N FO A B S T R A C T
Keywords: Here, we present a new scheme of analysis combining micro-energy dispersive X-ray fluorescence spectrometry
X-ray fluorescence spectrometry (μ-XRF) with a multivariate approach that allows to establish the inter-correlation of multiple elements and their
Multivariate approach elemental map in plants. The main advantage of this procedure is that XRF spectral profiles can be analysed
Nicotiana tabacum seedlings directly, by means of principal component analysis (PCA), allowing a quick interpretation of the results.
Arsenic distribution
Furthermore, this analysis requires small amounts of plant material and can be performed in whole individual
Elemental map
seedlings in the hydrated state without chemical extraction. With this technology, we determined the dis-
tribution of arsenic (As) and the variation and spatial distribution of multiple elements in whole tobacco
seedlings grown in the presence of different arsenate concentrations. We observed that As is detectable mainly in
roots, primarily in the basal part, but also in the root apex in seedlings grown in the highest arsenate con-
centration. The low rate of As translocation from roots to shoots and the significant increase in S are consistent
with previous evidence showing that As is retained in roots by forming complexes with thiol peptides. We also
found a significant non-linear increase in P, as arsenate is taken up by phosphate transporters and induces the
expression of genes encoding them. A decrease in Mn, Fe and Zn proportional to the accumulation of As and in
the same tissues, suggests a competition of these elements with As for cellular transporters.
⁎
Corresponding authors.
E-mail addresses: maura.cardarelli@uniroma1.it (M. Cardarelli), silvia.serranti@uniroma1.it (S. Serranti).
https://doi.org/10.1016/j.sab.2018.05.029
Received 21 September 2017; Received in revised form 28 May 2018; Accepted 30 May 2018
Available online 30 May 2018
0584-8547/ © 2018 Elsevier B.V. All rights reserved.
G. Capobianco et al. Spectrochimica Acta Part B 147 (2018) 132–140
Fig. 1. Nicotiana tabacum: control samples (A), 50 μM As (B) and 100 μM As (C). (For interpretation of the references to color in this figure legend, the reader is
referred to the web version of this article.)
accumulating As, depending on the amount of this element that is taken number of independent uncorrelated variables Principal Components
up from the soil and on how the plant distributes it in its tissues [13]. needed to explain the maximum variance of a large set of data [21].
Some hyper-accumulator plants such as the fern Pteris vittata are cap- With reference to tobacco seedlings exposed to arsenate, the results are
able of accumulating As in their aerial part, thus tolerating high con- visualized as eigenimages or eigenvectors representing the distribution
centrations of this soil pollutant [14]. Other plants, including crops, variance of detected elements in the plants, as well as As concentration
accumulate As mainly in roots and show limited toxicity symptoms with respect to the detected elements.
[15].
So far μ-XRF has been focused mostly on hyperaccumulators, to 2. Experimental
provide both in a semi-quantitative and topological way a better de-
scription of the accumulation mechanisms of As. A synchrotron X-Ray 2.1. Seedling growth
study on Pteris vittata, describes the accumulation and spatial dis-
tribution of As in different organs, detached from the fern [16]. In Nicotiana tabacum Petite Havana SR1 seeds were surface sterilized
addition, benchtop μ-XRF has been successfully used on the hyper- by immersion in sodium hypochlorite solution containing 1% available
accumulator Pityrogramma calomelanos to determine the distribution of chlorine (v/v), for 5 min. Seeds were then washed four times with
As in the hydrated state as well as As and P content on pelletized sterile distilled water, stratified at 4 °C for three days and then in-
powdered samples from the pinna, stipe and root. This study showed cubated in half-strength MS medium (Duchefa M0222), supplemented
that As causes alterations in P distribution [17]. with 8% agar (Duchefa P1001) and 2% sucrose (Duchefa 50,809), in a
However As distribution, as well as changes in multiple elements, growth chamber in a 16/8 h light/dark cycle at 22 °C. Seven days after
determined in hyperaccumulator organs, is not sufficient alone to per- germination 10 seedlings were transferred to the medium containing 0,
form a full understanding of metabolic processes that occur within 50, 100, μM Na2HAsO4·7H20 (Sigma A6756). After 9 days seedlings
plants, including crops, exposed to As, while this can dramatically were collected for subsequent analysis (Fig. 1).
contribute to develop techniques limiting As migration into the food
chain. The mechanisms operating in plants for As uptake, transport and 2.2. μ-XRF analysis and statistical approach
cellular distribution can be studied by measuring the changes in the
localization and concentration of multiple elements [18]. It is important A μ-XRF benchtop spectrometer (M4 Tornado, Bruker®), equipped
to simultaneously assess the variations in the concentration and loca- with a Rh X-ray tube with polycapillary optics and XFlash® detector
lization of essential elements in different tissues of an entire plant ex- providing an energy resolution of better than 145 eV, was utilized to
posed to As. perform the analysis. The polycapillary optics allow the focusing of tube
In this study we focused on Nicotiana tabacum whole individual radiation, on a very small spot size (about 30 μm), by multiple reflec-
seedlings exposed to arsenate, whose As content has been previously tions thus providing a spot intensity increase by up to 104x compare to
quantified by ICP-OES and the concomitant production of collimator, the results being faster and more detailed (i.e. spatial re-
Phytochelatin-S-rich peptides -responsible for As detoxification- has solution) analysis. Spectrum energy calibration was performed daily,
been demonstrated [19]. The localization of As and multiple elements before each analysis batch, by using zirconium (Zr) metal (Bruker®
as well as a semi-quantitative evaluation or their content was in- calibration standard). The sample chamber can be evacuated to
vestigated by μ-XRF combined with a multivariate approach, allowing a 25 mbar and, therefore, light elements such as sodium can be measured.
direct and fast analysis of elemental spectral profiles. The experimental The samples are mounted on a thin layer (0.01 mm) of polyethylene,
data to be submitted to multivariate analysis usually derive from the suspend on chamber to reduce the noise of map acquisition and pressed
computation of quantitative parameters (e.g., peak areas or peak parallel to the stage table. Samples with an even and flat surface like
heights) for each identified chemical element within the spectrum. But sections can be put directly on the stage table without coating. At
with this method the processing time is considerable. Such an approach constant exciting energies of 50 kV and 500 μA, the measurement
is time consuming and important information, characterising the conditions were adapted for the different investigated samples. The
spectral profiles, may be lost [20]. The proposed approach was aimed at dwell time and the pixel resolution, depending on the samples size [20]
developing an appropriate strategy for multivariate treatment of XRF have been respectively set up at 15 ms/pixel and 35 μm. An image
spectral and hypermaps data starting from the analysis of the raw data. showing the relative element map was realised (Fig. 2).
The improvement of this strategy, able to account for inter-correlation The hypermap import and processing have been preliminary per-
among elements detected, may represent an important step forward in formed utilizing the ESPRIT M4 Tornado software and, after the ex-
plants analyses. To reach this goal Principal Component Analysis (PCA) traction of raw data, statistical analysis was performed following a
is applied. PCA is a multivariate analysis method identifying the lowest standard chemometric based approach utilizing the PLS_Toolbox
133
G. Capobianco et al. Spectrochimica Acta Part B 147 (2018) 132–140
Fig. 2. Nicotiana tabacum hypermap obtanied by M4 tornado: control samples (A), 50 μM As (B) and 100 μM As (C). (For interpretation of the references to color in
this figure legend, the reader is referred to the web version of this article.)
2.2.1. Baseline
This procedure was applied to perform a fitting of a polynomial of a
specific order to points, which are known to be baseline (no-signal)
points. This approach is commonly utilized in spectroscopic applica-
tions where the signal in some variables is due only to baseline
(background) [27].
2.2.3. Smoothing
The most common technique of differentiation for smoothing is the
Savitzky–Golay routine [29]. This routine can be used for smoothing/
noise reduction, in order to avoid amplification of high-frequency noise
during the derivation process as it happens in the case of finite differ-
ence derivation [30].
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G. Capobianco et al. Spectrochimica Acta Part B 147 (2018) 132–140
Fig. 4. Fragment of a typical Energy Dispersive micro X-Ray Fluorescence (μ-EDXRF) spectrum related to Nicotiana tabacum seedlings exposed to 100 μM As.
Table 1. Arsenic was not detectable in seedlings grown without ar- roots (Fig. 5). Mn, Fe and Zn were detectable only in roots – in the basal
senate, while in seedlings grown at 50 μM As it was detectable only in and in the apical part – both in the presence and in the absence of
the roots. When grown at 100 μM As, seedlings showed a significantly arsenate, S, and P although detectable in the absence of As, showed a
higher level of As in roots and a lower level in leaves. In these seedlings, stronger signal in roots and leaves of seedlings grown in the presence of
the Translocation Factor (TF, the ratio of As in shoots vs roots) was arsenate (Fig. 5). Thus the spatial distribution of As appears to be si-
0.14. milar to those of Fe, Zn and Mn, whose levels simultaneously decrease
Almost all the above mentioned essential elements showed sig- in the presence of arsenate.
nificant variations from controls in As-treated seedlings; in particular, a
nearly linear decrease of Fe, Mn, Zn was observed in roots at increasing 3.3. Multivariate analysis of μ-XRF hypermap
arsenate; in contrast a significant, non-linear increase in P, and S was
observed in roots at increasing arsenate (Table 1). To better understand the variation of different essential elements in
These results point to an impact of As exposure on the levels of most response to As, a mosaic image was built as previously outlined, starting
essential elements and suggest a main effect on Fe, Mn, Zn, P and S. from the collected spectra datasets after background removal, by means
of a preliminary PCA with Baseline, Smoothing, Normalize, Mean
3.2. Identification of As and essential element distribution in tobacco Centering pre-processing.
seedlings PCA score plots of hypermap data show significant changes in dif-
ferent element between controls and As-treated samples (Fig. 6A). In
To investigate the distribution of elements in seedlings grown in the particular, the main variations were detected in the first and the second
presence or absence of As, micro-chemical qualitative maps - false principal components. By analysing the loading plots related to the first
colour images where the presence of each specific detected element in component, we found that variations are mainly due to P and S, while
the investigated areas of the samples is topologically assessed - were those in the second component are due to Fe, Mn and Zn (Fig. 6B–C).
obtained. As expected, As was not detectable in seedlings grown in the To identify the distribution of As in each seedling, the range be-
absence of arsenate while it was detectable only in roots in As-grown tween 10.1 and 11.2 keV, corresponding to As Kα, was selected.
seedlings. At 50 μM arsenate, As was localized along the root but not in Normalize, Smoothing and Mean Centering, for PCA pre-processing was
the apex, and at 100 μM As was also detectable in the apical part of the carried out. As shown in Fig. 7A, the PCA score plots showed three
Table 1
Semi quantitative determination carried out by Energy Dispersive μ-XRF (ED μ-XRF) on root and leaves of Nicotiana tabacum for control (As0) and As-treated sample.
Mg Al Si P S K Ca Mn Fe Zn As
Different As concentrations: As0: 0 μM arsenate. As50: 50 μM arsenate and As100: 100 μM arsenate.
Sigma means: standard deviation calculated on 10 measurements performed for each root and leaves.
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G. Capobianco et al. Spectrochimica Acta Part B 147 (2018) 132–140
Fig. 5. μ-EDXRF element maps of As, P, S, Fe, Zn and Mn detected in Nicotiana tabacum controls and As-treated seedlings (0, 50, and 100 μM As). (For interpretation
of the references to color in this figure legend, the reader is referred to the web version of this article.)
different clouds corresponding to 0, 50 and 100 μM arsenate, respec- In order to analyse Zn, Fe and Mn accumulation in root regions with
tively. The analyses of all seedlings, carried out at the same time, re- a high As accumulation, we selected pixel/spectra where As signal is
vealed As mainly in the basal region of the roots at 50 μM arsenate the highest, i.e. the basal part of the root (Fig. 8), and we analysed
while the signal was stronger and detectable also in root apex at 100 μM spectral ranges from 6 to 12 keV to compare the As peak with those of
arsenate (Fig. 7B). Fe, Mn and Zn.
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G. Capobianco et al. Spectrochimica Acta Part B 147 (2018) 132–140
Fig. 6. Principal Component Analysis (PCA) score plot of Nicotiana tabacum hypermap (A), loadings of PC1 and PC2 (B) and PCA score plot with the set classes (C).
(For interpretation of the references to color in this figure legend, the reader is referred to the web version of this article.)
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G. Capobianco et al. Spectrochimica Acta Part B 147 (2018) 132–140
As
As
As
Fig. 8. Specific Areas in the Sample (SAS) selected on the Nicotiana tabacum hypermaps characterized by different As concentrations. (For interpretation of the
references to color in this figure legend, the reader is referred to the web version of this article.)
Fig. 9. Mean spectra of SAS selected on Nicotiana tabacum, grown in the presence of different As, before (A) and after pre-processing (i.e. Baseline and Smoothing)
(B). (For interpretation of the references to color in this figure legend, the reader is referred to the web version of this article.)
mainly in the basal region mostly on of the roots and it is detectable in tobacco seedlings in response to Cd and As. PCs, represent the main
the root apex only at high arsenate concentrations, indicating that As is detoxification system in plants, which acts by forming PC-As complexes
transported basipetally. with As (III) (arsenite) that are compartmentalized into the vacuole. In
We found a significant increase of P in roots of low As-grown our hands, the increase in S is higher at low than at high As con-
seedlings and, to a lesser extent, in roots of high As-grown seedlings. It centrations, consistent with previous results showing that PC synthesis
is known that in many species such as Arabidopsis and rice As (V) and P increases up to a threshold level of As then decreases at higher As
compete for uptake by the same transporters [34]. Thus, the increase in concentrations [36]. Our results corroborate the hypothesis that non-
P suggests that As (V) (the As present in our growth medium) uses P hyperaccumulator plants do not translocate efficiently As to the shoots,
transporters also in tobacco seedlings where it possibly induces their because it is stored in root cells as PC-As complexes [37].
synthesis like in Pteris vittata [35]. This increase in P transporters- that Elemental analysis and map combined with a multivariate approach
exhibit a preference for P over AsV (Meharg & Macnair, 1990; Meharg, allowed us to show a linear and concomitant decrease in Fe, Mn and Zn
1994)- can lead to an increase in P uptake. This increase in P accu- in As-grown seedlings. In particular, their levels are severely decreased
mulation is lower at high As, possibly due to the increasing competition in the basal region of the roots where As preferentially accumulates,
between As and P as As concentrations become higher. This depletion suggests that inside the cells As compete with Fe, Mn and
The increase in S is probably caused by the synthesis of glutathione Zn for binding to the metal tolerance proteins (MTP) which are low-
and phytochelatins, which is known to occur particularly in roots of specificity efflux transporters that regulate homeostasis of these metals
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G. Capobianco et al. Spectrochimica Acta Part B 147 (2018) 132–140
Fig. 10. PCA score plots (A) and loadings (B) of SAS with high As concentration of Nicotiana tabacum. PCA score plots (C) and loadings (D) of P and As concentration
in Nicotiana tabacum. PCA score plots (E) and loadings (F) of S and As concentration in Nicotiana tabacum. (For interpretation of the references to color in this figure
legend, the reader is referred to the web version of this article.)
139
G. Capobianco et al. Spectrochimica Acta Part B 147 (2018) 132–140
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