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Quarter 2 Module 1 General Biology 1 SC
Quarter 2 Module 1 General Biology 1 SC
General Biology 1
Quarter 2 - Module 1:
Energy Transformation
1. Explain coupled reaction processes and describe the role of ATP in energy
coupling and transfer.
2. Explain the importance of chlorophyll and other pigments.
3. Describe the patterns of electron flow through light reaction events.
4. Describe the significant events of the Calvin Cycle
5. Differentiate aerobic from anaerobic respiration
6. Explain the major features and sequence of the chemical events of cellular
respiration.
7. Distinguish major features of glycolysis, Krebs cycle, electron transport
system, and chemiosmosis.
8. Describe reactions that produce and consume ATP.
9. Describe the role of oxygen in respiration and describe pathways of electron
flow in the absence of oxygen.
10. Explain the advantages and disadvantages of fermentation and aerobic
respiration.
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What I Know (PRE-ASSESSMENT)
Directions: Read and understand each item and choose the letter of the correct
answer. Write your answers on a separate sheet of paper.
1. Majority of the CO2 is released during
A. Glycolysis C. Electron transport chain
B. Citric acid cycle D. Oxidative phosphorylation
3. The positively charged hydrogen ions that are released from the glucose during
cellular respiration eventually combine with _______ ion to form _________.
A. another hydrogen, a gas C. an oxygen, water
B. a carbon, carbon dioxide D. a pyruvic acid, lactic acid
4. The Krebs cycle (also known as citric acid cycle or tricarboxylic acid) and ETC are
biochemical pathways performed in which eukaryotic organelle?
A. Nucleus B. Ribosome C. Chloroplast D. Mitochondrion
7. Each molecule of fat can release ___ of ATP, compared with a molecule of glucose.
A. smaller amounts C. larger amount
B. the same amount D. only twice the amount
9. The chemical activities that remove electrons from glucose result in the glucose
being
A. Reduced B. oxidized C. phosphorylated D. hydrolysed
10. Which of the following is NOT true of the citric acid cycle? The citric acid cycle
A. includes the preparatory reaction
B. produces ATP by substrate-level ATP synthesis
C. occurs in the mitochondria
D. is a metabolic pathway, as is glycolysis
2
Lesson
ATP – ADP Cycle
1
Performance Standards:
Introduction:
3
What I Know
Directions: Write the letter of the best answer on a separate sheet of paper.
1. A structure that composed of sugar ribose, nitrogen base adenine and a chain of
3-phosphate groups.
a. ADP b. ATP c. NADH+ d. Nucleus
2. The process of breaking down bonds between the phosphate groups; this
happens when a water molecule breaks the terminal phosphate bond
a. Hydrolysis of ATP c. Oxidation
b. Phosphorylation d. Reduction
4. Are substances that absorb visible light; different pigments absorb light of
different wavelengths.
a. Chlorophyll b. Photon c. Pigments d. Light energy
5. The greenish pigment found in the thylakoid membrane inside the chloroplast of
a plant cell.
a. Light energy b. Chlorophyll c. Photon d. Pigments
What’s In
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Hydrolysis of ATP
• process of breaking down bonds between the phosphate groups
• this happens when a water molecule breaks the terminal phosphate bond
• HOPO32-, abbreviated Pi (inorganic phosphate) leaves ATP
• Forming Adenosine diphosphate (ADP)
• Energy is released. This comes from the chemical change of the system state of
lower free energy and NOT from the phosphate bonds.
• Hydrolysis releases so much energy because of the negative charges of the
phosphate groups. These charges are crowded together and their mutual
repulsion contributes to the instability of that region of the ATP. The energy
equivalent of the triphosphate tail of ATP is compared to a compressed spring.
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Fig. 1.c. Phosphorylation (ADP to ATP) and dephosphorylation (ATP to ADP)
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Fig. 1.d. The ATP cycle
Terminology:
Chromatography
is a separation technique used to identify various components of mixtures
based on the differences in their structure and/or composition.
Pigments
are substances that absorb visible light. Different pigments absorb light of
different wavelengths.
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Fig. 1.e. The Electromagnetic Spectrum
Pigments are the means by which plants capture sun‘s energy to be used in
photosynthesis. However, since each pigment absorbs only a narrow range of
wavelength, there is usually a need to produce several kinds of pigments of different
colors to capture more of sun‘s energy.
Chlorophyll
is the greenish pigment found in the thylakoid membrane inside the
chloroplast of a plant cell.
Chlorophyll absorbs blue and red light while it transmits and reflects green light.
This is why leaves appear green.
There are several kinds of chlorophyll. Among these, chlorophyll a plays the most
important role in photosynthesis. It directly participates in converting solar energy to
chemical energy.
Other pigments in the chloroplast play the part of accessory pigments. These
pigments can absorb light and transfer the energy to chlorophyll a. One of these
accessory pigments is chlorophyll b. Some carotenoids also contribute energy to
chlorophyll a. Other carotenoids, however, serve as protection for chlorophyll by
dissipating excessive energy that will otherwise be destructive to chlorophyll.
Structure of chlorophyll • Head—a flat hydrophilic head called porphyrin ring. It has
a magnesium atom at its center. Different chlorophylls differ on the side groups
attached to the porphyrin. • Tail—a lipid-soluble hydrocarbon tail.
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How does photoexcitation of chlorophyll happen?
1. A chlorophyll molecule absorbs photon or light energy.
2. An electron of the molecule in its normal orbital, said to be in its ground state,
will be elevated to an orbital of a higher energy. The molecule is now in an
excited state. The molecule only absorbs photon that has the energy that is
equal to the energy needed for it to be able to elevate from the ground state to
the excited state.
3. The excited state is unstable. Hence, excited electrons drop back down to the
ground state immediately after, releasing energy in the form of heat and photon.
This happens in isolated chlorophyll molecules. However, chlorophyll molecule
that is found in its natural environment in the thylakoid membrane forms a
photosystem together with proteins and other organic molecules to prevent the
loss of energy from the electrons.
Photosystem
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There are two types of photosystem:
Photosystem II—was discovered later after the discovery of Photosystem I, but
functions first in the light reaction of photosynthesis. The chlorophyll a in the
reaction center of Photosystem II effectively absorbs light with a wavelength of
680nm and thus called P680.
Photosystem I—was discovered first. Its reaction-center has a chlorophyll a
called P700 because it is effective in absorbing light with a wavelength of 700nm.
What’s New
What Is It
Q & A Activity:
10
What’s More
Q and A Activity:
1. How do plants cope with the change in season? Give a detailed description and
explanation.
2. How do plants capture the sun‘s energy?
3. What happens to light when it hits an object?
What I Can Do
Performance Activity:
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Lesson
Photosynthesis
2
Introduction:
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What I Know
1. Light reactions
2. Noncyclic electron flow
3. Cyclic electron flow
4. Plastoquinone (Pq)
5. Plastocyanin (Pc)
6. ATP
7. Photophosphorylation
8. Ferredoxin
9. NADP+
10. NADPH
11. Chemiosmosis
What’s In
During PHOTOSYNTHESIS:
Energy from sunlight is harvested and used to drive the synthesis of glucose
from CO2 and H2O. By converting the energy of sunlight to a usable form of
potential chemical energy, photosynthesis is the ultimate source of metabolic
energy for all biological systems.
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Photosynthesis takes place in two distinct stages. (A) In the light reactions,
energy from sunlight drives the synthesis of ATP and NADPH, coupled to the
formation of O2 from H2O. (B) In the dark reactions (named because they do not
require sunlight), the ATP and NADPH produced by the light reactions drive
glucose synthesis.
In eukaryotic cells, both the light and dark reactions of photosynthesis occur
within chloroplasts—the light reactions in the thylakoid membrane and the dark
reactions within the stroma.
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Light Reactions Events
4. The excited electrons are then passed on from the primary electron acceptor to
the electron carrier molecules through the electron transport chain until they
reach Photosystem I. The electron carrier molecules involved here are
plastoquinone (Pq), a cytochrome complex, and plastocyanin (Pc).
5. At each transfer, the electrons release small amounts of energy. This energy is
used to pump hydrogen ions across the membrane. The splitting up of water
molecules results to an uneven distribution of hydrogen ions in the stroma and
the lumen. The H+ ions tries to equalize their distribution by moving from the
lumen to the stroma through the aid of a membrane protein called ATP synthase.
This is referred to as chemiosmosis. The movement of hydrogen ions through the
ATP synthase channel triggers the synthesis of ATP from ADP. The ATP contains
high-energy phosphate bonds.
6. Meanwhile, photon is also absorbed and energy is passed on from one pigment
molecule to another until the energy reaches the reaction center complex of
Photosystem I. The energy excites the electron present in the pair of P700
chlorophyll a located here. The excited electron is then transferred to a primary
electron acceptor, making the P700 positively charged and now seeking electrons
to fill up the missing ones. This is filled up by the electrons from Photosystem II
that are passed on through the electron transport chain.
8. An enzyme, the NADP+ reductase, then transfers the electron to NADP+ and
stabilizes it by adding a proton (H+) to form NADPH. NADPH is then released to
the stroma and becomes part of the Calvin Cycle.
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Cyclic Electron Flow Aside from the usual route of electron flow as described in the
events of the light reactions (i.e., noncyclic or linear electron flow), photo-excited
electrons may take a short-circuited route which utilizes Photosystem I but not
Photosystem II. The ferrodoxin goes back to the cycle and passes the electron to the
cytochrome complex and to the Pc until it reaches P700 chlorophyll instead of
transferring the electron to NADP+reductase. Due to this event, no NADPH is
produced but ATP is still synthesized.
The sugar that is produced in the Calvin Cycle is not the six-carbon glucose that
we are familiar with. This is formed later on. What is produced in the Calvin
Cycle is a three-carbon sugar known as G3P or glyceraldehyde-3-phosphate.
The Calvin Cycle needs to ‗spin‘ three times to make one molecule of G3P from
three molecules of CO2.
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Three Phases of Calvin Cycle:
Carbon Fixation
Reduction
Regeneration of RuBP
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What’s New
1. You can draw pictures of photosynthesis in a bond paper. You can also go to
computer/printing shop by watching videos or sample pictures of Overview of
Photosynthesis, Overview of the Stages of the Calvin Cycle in Photosynthesis and
make these pictures into tarpaulin type for long use.
What Is It
Q & A Activity:
1. What are the two kinds of reactions in photosynthesis?
2. What are the basic stages of the Calvin cycle?
3. What are the reactants and products of photosynthesis?
4. Write your answers on a bond paper.
What’s More
Directions: Fill-in the table below for the major events and features of
photosynthesis. The option table is given for you to answer the needed materials and
end products of photosynthesis.
NEEDED
REACTION SERIES END PRODUCTS
MATERIALS
1. Light-dependent reactions (take
place in the thylakoid membrane)
a. Photochemical reactions
b. Electron transport
c. Chemiosmosis
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Available Choices
c. Light Energy;
a. Electrons b. NADPH, O2 pigments d. ATP
(Chlorophyll)
e. Electrons, f. Proton h. Ribulose
NADP+, H2O, gradient, g. Carbohydrates, biphosphate, CO2,
Electron ADP+P, ATP ADP+P, NADP+ ATP, NADPH,
acceptors synthase necessary enzymes
What I Can Do
Performance Task:
For this activity, you have to gather materials that will help build a three-
dimensional model that represents the events or phases of the Calvin cycle. You may
use clay, Styrofoam balls, beads, or recyclable materials. The outputs will be
presented to the teacher.
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Lesson
Cellular Respiration
3
Cellular Respiration
In cellular respiration, glucose is converted to pyruvic acid which can enter
either through aerobic respiration or anaerobic respiration.
In aerobic respiration, pyruvic acid molecules enter the mitochondria and
through a series of chemical reactions known as the citric acid cycle (Kreb‘s cycle) via
electron transport chain. In the Kreb‘s cycle, the pyruvic acid is converted to carbon
dioxide. The electron transport chain accepts the electron from the breakdown
products of the Kreb‘s cycle and glycolysis via the NADH and FADH2. At the end of
the chain, the electrons are combined with hydrogen ions and molecular oxygen to
form water. This process can produce ATP. During this process, the glucose molecule
is broken down and the carbon atoms released from glucose are combined with
oxygen to produce carbon dioxide.
In anaerobic respiration, pyruvic acid is converted to lactic acid. There is a
production of two ATP molecules for each glucose molecule.
Fig. 3.a. Courtesy: Enger, Eldon D. et al., (2012). Concepts in Biology 14th Edition.
USA: McGraw-Hill (Retrieved August 13, 2015)
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What I Know
1. Aerobic respiration
2. Anaerobic respiration
3. Pyruvic acid
4. Fermentation
5. Glycolysis
6. Krebs cycle
7. Electron transport chain
What’s In
In Cellular respiration:
Oxygen is reduced to water
Has electron transport chain located within the cristae of the mitochondria,
where ATP is produced by chemiosmosis
Has enzyme-catalyzed reactions within the semi-fluid interior
A carbohydrate is oxidized to carbon dioxide
Glycolysis – means ―sugar-splitting‖ that occurs in the cytosol of the cell. It does not
require oxygen to breakdown glucose into pyruvate.
Krebs cycle – completes the metabolic breakdown of glucose to carbon dioxide and
produces 2 ATP.
Electron Transport Chain – contains the chain members (carrier and protein
complexes, ATP synthase complex and ATP channel protein. These membrane
proteins shuttle electrons during the redox reactions. The electrons will be used to
produce ATP by chemiosmosis.
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NADH and FADH2 – these are electron acceptor molecules that contain high-energy
electrons. They transport the electrons to ETC to produce many more ATPs by
oxidative phosphorylation.
ATP synthase – is an enzyme that is responsible for the great production of ATPs.
This happens when it uses the energy coming from H+ ions to bind ADP and
phosphate group together to produce ATP.
Fig. 3.b. The diagram below shows the total energy produced from the complete
breakdown of glucose by aerobic respiration.
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Summary of Cellular Respiration
SOME SOME
STAGE SUMMARY STARTING END
MATERIALS PRODUCTS
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Differences and Similarities of Aerobic, Anaerobic and Fermenting Organisms
Differences Similarities
Aerobic, Anaerobic
Aerobic Anaerobic Fermenting
and Fermenting
Organisms Organisms Organisms
Organisms
Use Oxygen Do not use oxygen Do not use oxygen ATP is produced
Lactate (Lactate
H2O and Potassium fermentation) or ethyl
H2O is the by- CO2 is the waste
nitrate are the by- alcohol (alcoholic
product product
products fermentation) is the by-
product
Final acceptors of
Electron
electrons are pyruvate Electrons are
acceptor is O2 With electron
reduced to lactate, and transferred from
and is reduced transport chain
acetaldehyde reduced glucose to NADH
to water
to ethyl alcohol
With electron
Electron acceptor is No electron transport
transport
nitrate and sulfate chain
chain
Occur in
Occur in prokaryotes
prokaryotes and Occur in prokaryotes
and eukaryotes
eukaryotes
Simple and faster
Requires no special
alternative to cellular
organelles
respiration
Requires no special
organelles
Glycolysis and waste
product formation are
two sets of reactions
that occur
What’s New
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Comparing Graphic Organizer
What Is It
Aerobic Anaerobic
Similarity
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What’s More
Molecular
Energy
Source
Aerobic Anaerobic
Anaerobic
1. What are the three kinds of enzyme-controlled reactions so that the chemical-
bond energy from a certain nutrient is released to the cell in the form of ATP?
2. What are the hydrogen electron acceptors for aerobic and anaerobic respiration
as well as in fermentation?
3. These are the by-products of aerobic respiration that are considered low-energy
molecules.
4. What are the outputs produced by anaerobic respiration? What about in
fermentation?
5. What are two general metabolic mechanisms by which certain cells can oxidize
organic fuel and generate ATP without the use of oxygen?
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Directions: Fill-in the table below for the major events and features of cellular
respiration. The option table is given for you to answer the needed materials and
end products of cellular respiration.
2. Preparatory reaction
4. Electron Transport
and chemiosmosis
Available Choices
d. Pyruvate,
a. Pyruvate, ATP, b. NADH, FADH2, c. Glucose, ATP,
Coenzyme A,
NADH O2, ADP Pi NAD+, ADP Pi
NAD+
e. Acetyl CoA,
f. Acetyl CoA, g. CO2, NADH, h. ATP, H2O,
H2O, NAD+,
CO2, NADH FADH2, ATP NAD+, FAD
FAD, ADP Pi
Directions: This is a modified TRUE or FALSE activity. Write the word TRUE if the
underlined word/phrase being referred to is correct. If it is FALSE, change the
word/phrase to make the whole statement correct based on the concept of cellular
respiration. Write your answer on a separate sheet of paper.
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4. An electron transport system consists of a number of molecules, majority are
proteins, located in the matrix of the mitochondria of eukaryotic cells and the
plasma membrane of aerobic prokaryotes.
5. Pyruvate oxidation and the citric acid cycle, oxidative phosphorylation: electron
transport chain and chemiosmosis are the metabolic stages reserved for
cellular respiration.
6. The breakdown of glucose to carbon dioxide is completed in the electron
transport chain.
7. ATP synthase is the enzyme that makes the bulk of the ATP from ADP and Pi by
chemiosmosis.
8. ATP synthase uses the energy of an existing hydrogen ion gradient to power
ATP synthesis.
9. Phosphorylation of ADP to form ATP stores at least 14.6 kcal per molecule of
ATP.
10. Citric acid cycle generates 2 ATP whether oxygen is present or not, whether
the conditions are aerobic or anaerobic.
Directions: Arrange the following to get the right energy flow sequence in aerobic
respiration.
1. Energy-releasing pathways
2. Energy-acquiring pathways
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What I Can Do
Performance Task:
Homemade Virgin Coconut Oil and Fermentation/Modified Natural Vinegar
Fermentation Method. A video link is provided:
https://www.youtube.com/watch?v=xGK8z3DXw7E
https://www.youtube.com/watch?v=EUu7SF25tXM
https://www.youtube.com/watch?v=Jh0wWMdNkv4
https://www.youtube.com/watch?v=3-wE7pbXaXY
This can be done at home with precautionary measures. Document your
output and submit it via YouTube or Facebook. Just click the video link on how to
make the homemade virgin coconut oil and natural vinegar fermentation method.
Choose only one for your performance task.
Key Concepts:
Another theory says that the enzyme present in the coconut makes the
separation of substances to occur. The so-called ‗fermentation method‘ happens
when after 16 to 24 hours of settling, the water smells and tastes sour. The so-
called ‗natural‘ explains that there is no addition of any other substance or
microorganism in fermenting the virgin coconut oil. Also the ‗virgin‘ in the virgin
coconut oil implies that there is no substance added to make the oil.
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Post-Assessment
Directions: Read and understand each item and choose the letter of the correct
answer. Write your answers on a separate sheet of paper.
1. Majority of the CO2 is released during
A. Glycolysis C. Electron transport chain
B. Citric acid cycle D. Oxidative phosphorylation
3. The positively charged hydrogen ions that are released from the glucose during
cellular respiration eventually combine with _______ ion to form _________.
A. another hydrogen, a gas C. an oxygen, water
B. a carbon, carbon dioxide D. a pyruvic acid, lactic acid
4. The Krebs cycle (also known as citric acid cycle or tricarboxylic acid) and ETC are
biochemical pathways performed in which eukaryotic organelle?
A. Nucleus B. Ribosome C. Chloroplast D. Mitochondrion
7. Each molecule of fat can release ___ of ATP, compared with a molecule of glucose.
A. smaller amounts C. larger amount
B. the same amount D. only twice the amount
9. The chemical activities that remove electrons from glucose result in the glucose
being
A. Reduced B. oxidized C. phosphorylated D. hydrolysed
10. Which of the following is NOT true of the citric acid cycle? The citric acid cycle
A. includes the preparatory reaction
B. produces ATP by substrate-level ATP synthesis
C. occurs in the mitochondria
D. is a metabolic pathway, as is glycolysis
30