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Quantum Chaos and The Brain
Quantum Chaos and The Brain
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On a very basic level, the entire universe runs on the rules of physics, which are mathematical
concept which our reality conforms to. On a similarly basic level, our entire being is run
based on our brain. Then, the need to explore the brain using the tools of our most basic
reality should emerge naturally. In this report, we shall first lay down some theoretical
groundwork, and then see in what ways quantum mechanics and chaos emerge in our brain.
Chaos
Differential equations
The basis of chaos is in the behaviour of a system of differential equations. A differential
equation is an equation which describes the change of a variable in regard to time. Consider
one of the most basic differential equations, Hook’s equation:
𝑑2 𝑥
= −𝑘𝑥 (1.1)
𝑑𝑡 2
For the sake of clarity, a first time-differential will have a single do as a superscript, and a
second time-differential will have two dots as a superscript, reformulating Hook’s law as:
𝑥̇ = −𝑘𝑥 (1.2)
In essence, Hook’s law describes a behaviour of a weight oscillating on a spring, where the
more it is displaced from the point of origin, the greater the acceleration it will experience
towards the point of origin.
𝑥̇ = 𝑓(𝑥) − 𝑔(𝑦)
𝑦̇ = −𝑘(𝑦) + ℎ(𝑥)
(1.4)
Model assumptions:
• There is infinite food
• The populations of prey and predators are controlled purely but their own population
and not outside forces
• Prey meeting will produce offspring
• Predators have infinite appetite
• Predators starve and die
You will probably notice that this model is a bit basic, as it doesn’t allow for direct predator-
prey interaction. A more realistic model will be the Lotka–Volterra equations:
𝑥̇ = 𝛼𝑥 − 𝛽𝑥𝑦
𝑦̇ = −𝛾𝑦 + 𝛿𝑥𝑦
(1.5)
Here, the xy parameter allows for direct predator-prey interaction.
With our equations in place, we can start our simulation. But how do we run the simulation?
We draw a grid called the “phase space”, where the x-axis is our x value, and the y-axis is our
y value. We choose an initial value for our x and y, and for each step calculate 𝑥̇ and 𝑦̇ . The
𝑥̇
two values will give us a pseudo-vector in the form of (𝑦̇ ). It is a pseudo-vector since it is
still dependent on a time-differential. In order to turn it into a proper vector we must decide
on the length of our time-step: the smaller it is, the more accurate our simulation will be but
it’d be more calculation intensive, the larger it is, the less accurate our simulation will be, but
the less intensive It will be.
With our time step decided, we can multiply our 𝑥̇ and 𝑦̇ with it, and have a proper vector in
𝑑𝑥
the form of (𝑑𝑦 ). We take our vector, add it to our initial point, and repeat the process.
How will our simulation look like? It will be something in the form of this:
But this is just the picture from a very limited view of the entire phase space. A more
complete picture of the space can be seen in figure 1.2:
It may not be clear from the figure, but there is a stable cycle hiding in the phase space:
This stable cycle is one where any point on it will result in the simulation staying within it
regardless of how long it is run. In this particular case, the points outside and inside the cycle
will tend to move away from it. Another feature one would notice is the dot in the middle of
the cycle, this dot is a stable point where the phase space will remain in (i.e. 𝑥̇ and 𝑦̇ are zero)
Chaos proper
This will be a casual description of chaos. For a more formal definition refer to appendix 1.
Strange attractor
Attractors are a general term to points or cycles which attract the phase space towards them
(much like the point in figure 1.2). Chaotic dynamics introduce a unique type of attractor, a
In order to bring the phase space to a higher dimension, we shall define two new axes:
population at t+1, and the population at t+2. In short, x-axis is P(t), y-axis is P(t+1), and z-
axis is P(t+2). Figure 1.5 shows the higher dimensional phase space being plotted. See how
while the two-dimensional representation does show some structure, it is still lacking when
compared to the three-dimensional representation.
Quantum Mechanics
The Wavefunction
Let us first begin with the time-independent Schrödinger equation:
𝐻Ψ = 𝐸Ψ
(2.1)
This equation describes that the energy of a system can be described as an operator called the
Hamiltonian. Ψ is the Greek letter psi, and represents the wavefunction, which describes the
particles in the system. For example, in a trivial system, Ψ can take on the form:
Ψ(𝑥) = 𝐴𝑠𝑖𝑛(𝑥)
(2.2)
Ψ has two main property. One is that it is continuous, meaning that it is a smooth curve that
is drawn by a single uncut line. The second one is normalization. Normalization states that
the area under the curve that Ψ describes is 1, and is formulated as:
∫ Ψ ∗ Ψ𝑑𝜏 = 1
(2.3)
The Hamiltonian in one dimension and time-independent usually takes on the form of
ℏ2 𝑑2
𝐻 = − ( ) ( 2 ) + 𝑉(𝑥)
2𝑚 𝑑𝑥
(2.4)
Where:
• ℏ is planks constant divided by 2π
• m is the mass
• V is the potential energy along the x-axis
Now, imagine a barrier. We’ll set the barrier’s energy to be higher than that of our particle. In
a classical system, our particle will not be able to cross the barrier, but in out quantum
system, the math tells a different story.
ℏ2 𝑑2
𝑍𝑜𝑛𝑒 𝐶: 𝐻 = − (2𝑚) (𝑑𝑥 2 )
(2.9)
Where V is the energy of the potential barrier.
2𝑚𝐸
𝑍𝑜𝑛𝑒 𝐴: 𝜓(𝑥) = 𝐴𝑒 𝑖𝑘𝑥 + 𝐵𝑒 −𝑖𝑘𝑥 , 𝑘 = √( )
ℏ2
2𝑚(𝐸)
𝑍𝑜𝑛𝑒 𝐴: 𝜓(𝑥) = 𝐴𝑒 𝑖𝑘𝑥 + 𝐵𝑒 −𝑖𝑘𝑥 , 𝑘 = √( )
ℏ2
2𝑚(𝐸−𝑉)
𝑍𝑜𝑛𝑒 𝐵: 𝜓(𝑥) = 𝐴𝑒 𝑖𝑘𝑥 + 𝐵𝑒 −𝑖𝑘𝑥 , 𝑘′ = √( )
ℏ2
2𝑚𝐸
𝑍𝑜𝑛𝑒 𝐶: 𝜓(𝑥) = 𝐴𝑒 𝑖𝑘𝑥 + 𝐵𝑒 −𝑖𝑘𝑥 , 𝑘 = √( )
ℏ2
(2.10)
Since E<V, k’ is imaginary. This means that equation 2.10 for zone B can be rewritten as
𝜓(𝑥) = 𝐴′𝑒 −𝑖𝑥 + 𝐵′𝑒 𝑘𝑥
(2.11)
This will be a mixture of exponentially decaying and increasing exponential functions. Note
that for situations where E<V the wavefunction does not oscillate. Now, assume that B
extends infinitely. 𝐴′𝑒 −𝑖𝑥 will tend to zero and 𝐵′𝑒 𝑘𝑥 will tend to infinity. Here we see that
because of equation 2.3, the wavefunction must consist only of the decaying exponential. The
important point that that even in an infinitely long potential barrier, the wavefunction will
still slightly penetrate it.
Going back to the system in figure 2.1. Here, since the barrier isn’t infinite, we cannot ignore
the exponentially increasing part of equation 2.11. Noting the continuous property of the
wavefunction, we can watch the coefficients at the points where the zones meet. We shall all
the x=0 coordinate Boundary 1, and the x=l coordinate Boundary 2:
𝐵𝑜𝑢𝑛𝑑𝑎𝑟𝑦 1: 𝐴 + 𝐵 = 𝐴′ + 𝐵′
𝐵𝑜𝑢𝑛𝑑𝑎𝑟𝑦 2 = 𝐴′𝑒 −𝑘𝑙 + 𝐵′𝑒 𝑘𝑙 = 𝐴′′𝑒 𝑖𝑘𝑙 + 𝐵′′𝑒 −𝑖𝑘𝑙
(2.12)
And the continuity of the slopes at the two points:
(2.13)
With these two equations it is possible to find the coefficients in some real systems.
Calculating tunnelling
Let us consider the scenario when a particle is prepared with momentum carrying it
towards the right. We can infer that coefficient B” is zero. This is because the wavefunction
𝐵′′𝑒 −𝑖𝑘𝑙 denotes a particle travelling to the left on the right side of the barrier, and as the
momentum is to the right, it is impossible.
On the left side of the barrier, a particle can be found going to the left, as the barrier
can reflect incoming particles. We can therefore conclude a relationship between B and the
probability of reflection, and that relationship is 𝑃𝑟𝑒𝑓 = |𝐵 2 |. By experimentally measuring
the reflection probability, we can find B.
Alternatively, we can identify |𝐴′′2 | as the probability a particle penetrates the barrier
end emerges on the right of it.
Now, assume a particle was not reflected, what is the probability it’ll be carried
through through? This transmission probability is defined as 𝑃𝑡𝑟𝑎𝑛𝑠 = |𝐴′′2 |/|𝐴2 |. This is the
probability that a particle incident on the left of the barrier emerges on its right.
By manipulating equations 2.12 and 2.13, we get at the result:
1 (𝑒 𝑘𝑙 − 𝑒 −𝑘𝑙 )2
𝑃𝑡𝑟𝑎𝑛𝑠 = ; 𝐺= , 𝑘 = √{2𝑚(𝑣 − 𝐸)/ℏ2 }
1+𝐺 𝐸 𝐸
4(𝑉 )(1 − 𝑉 )
(2.14)
Notice that 𝑃𝑡𝑟𝑎𝑛𝑠 tends buy never reaches zero.
In this figure, a cross section of a strange attractor is shown. See how each U is essentially a
smaller similar pattern. A chaotic pattern in the brain will demonstrate such a pattern.
Now, look at figure 3.2. In this figure, brain signal was recorded and mapped. Each slide is a
different cross section of the signal. In each slide, you can see self-similarities, showing the
chaotic nature of brain signals.
They chose to use a neural model called the “averaged neuron model,” where the behaviour
of the neuron is regulated by the concentration of three ions, K+, Na+, and Ca2+ (Figure 3.3).
Note the voltage-gated Ca2+ channel; that channel shows how while Ca2+ concentration can
affect Vm, Vm also affects the concentration of Ca2+. This results in a highly dynamic system,
which is difficult to explore.
As can be seen, the asleep brain state is cyclical, with figure 3.4 showing a stable cycle. This
is unsurprising as previous observations showed Vm to oscillate, a behaviour that is not
chaotic. The interesting observation is in the waking states, with both figure 3.5 and 3.6
showing chaotic dynamics. The justification offered for this behaviour in the paper is the
need for different firing patterns, which the waking state requires.
Let us assume that the brain is a purely classical system. This will mean that the brain is a
hierarchal system with each layer being governed by non-linear interactions. At the basis of
the hierarchy will be the molecules and atoms. It is uncontroversial to say that the quantum
fluctuations of these atoms and molecules will result in vastly different states in a phase space
of a chaotic system modelling them. It has been proposed that the quantum fluctuations
average each other out, and do not have any effects on the brain-state. Let us propose the
alternative: The hierarchal structure of the brain combined with the high variability in the
initial conditions at the basis of the hierarchy, will result in vastly different brain state given
that two identical brain states were simulated. Or, as stated by Jeffrey Satinover:
“[Q]uantum dynamics alters the final outcomes of computation at all levels – not by
producing classically impossible solutions but by having a profound effect on which
of many possible solutions are actually selected”
So, it is shown that quantum mechanics can be used by organisms, and humans in particular.
But, can the brain utilize quantum mechanical phenomena? Paul Glimcher proposes that the
electrical signals in neurons may be affected by quantum phenomena. Saying:
“[T]hese data suggest that membrane voltage is the product of interactions at the
atomic level, many of which are governed by quantum physics and thus are truly
indeterminate events. Because of the tiny scale at which these processes operate,
interactions between action potentials and transmitter release as well as interactions
between transmitter molecules and post-synaptic receptors may be, and indeed seem
likely to be, fundamentally indeterminate”
“If neurons poised on the dynamics of individual membrane proteins are critical to
the initiation of a particular course of motor action or cognitive process, then the
consequent action or cognitive processes will be subject to non- deterministic
quantum dynamics”
Quantum neurobiology
Overall, quantum mechanical phenomena in the brain is proposed but not yet observed. It has
replaced the old “here be dragons” of the maps of old, with “here be quantum mechanics.”
The most notorious invoking of quantum mechanics is as an explanation for consciousness.
This explanation errs on the preposterous side, as it will quantum coherent states which are
far larger than a few molecules (on a scale within the magnitude of a neuron), and coherence
time long enough to retain and transmit information. The combination of the two in the
highly noisy environment of the brain is highly likely. As a side note, current quantum
computers require high isolation and temperature close to absolute zero to retain coherence
for algorithms to be run. Those usually involve only a few molecules, which are a few orders
of magnitude smaller than what will be required for the brain to use.
The greatest use for physics in the field of neuroscience is in the development of techniques
such as Magnetic resonance imaging (MRI) or Positron emission tomography (PET). Outside
of these contributions there be dragons.
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Chaos
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Quantum mechanics
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The dynamical systems (or models describing deterministic evolution, cf. Dynamical
system) considered are differential equations , with , a differentiable
manifold and a vector field on , and differentiable mappings
which may or may not be invertible. For a given initial state , the corresponding
evolution is the solution of the differential equation with or, in the case of a
mapping, the function given by . The last case is the discrete-time
situation, the first case that of continuous time. Even if the evolutions can be defined for
negative time, only the part with positive time is considered. Also, only bounded evolutions
are considered here, i.e. evolutions , , with , respectively , whose closure, as
a subset of , is compact. It is assumed that there is a metric defined on .
One says that such a dynamical system is chaotic if there is a subset which has positive
measure (for every measure in the Lebesgue measure class) which is invariant in the sense
that every evolution starting in stays in , and such that the evolutions in have the
following properties:
3) (sensitive dependence on initial conditions) there is some positive constant such that for
each and each , there is some , in an -neighbourhood of , such that for
some positive time the evolutions starting in and are more than apart.
Appendix 2: J. Roschke and E. Basar reasoning for the presence of strange attractors in
EEG signals
Let us now imagine the periodic movement of a metronome or a pendulum swinging
from left to right and back again. From the viewpoint of geometry, this motion is said to
remain within a fixed cycle forever. This is the second kind of attractor, the limit cycle. All of
the various types of limit cycles share one important characteristic: regular, predictable
motion. The third variety, the strange attractor, is irregular, unpredictable, or simply
strange. For example, when a heated or moving fluid moves from a smooth, or laminar, flow
to wild turbulence, it switches to a strange attractor.
Chaotic behavior in deterministic systems usually occurs through a transition from an
orderly state when an external parameter is changed. In studies of these systems, particular
attention has been devoted to the question of the route by which the chaotic state is
approached. An increasing body of experimental evidence supports the belief that apparently
random behavior observed in a wide variety of physical systems is caused by underlying
deterministic dynamics of a low-dimensional chaotic (strange) attractor. The behavior